CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017403	Bordetella pertussis strain 509 chromosome, complete genome	4 crisprs	csa3,cas3,DEDDh,DinG	0	0	28	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017403_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017403_1

456353-456446

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP017403_1

>merge|NZ_CP017403|1|456353-456446|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>NZ_CP017403|1|1|456353-456446|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017403.1\|WP_010929577.1\|454641_455592_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017403.1\|WP_003814730.1\|451462_452197_-\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
NZ_CP017403.1\|WP_010929786.1\|447842_449354_+\|TAXI-family-TRAP-transporter-solute-binding-subunit	unknown	unknown	gnl\|CDD\|270238
NZ_CP017403.1\|WP_003814685.1\|464381_465353_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
NZ_CP017403.1\|WP_033446199.1\|444880_445375_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP017403.1\|WP_003814728.1\|450873_451053_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377342
NZ_CP017403.1\|WP_010929788.1\|457535_458936_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP017403.1\|WP_019247421.1\|455723_456122_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|234569
NZ_CP017403.1\|WP_003814691.1\|462304_463537_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
NZ_CP017403.1\|WP_003814726.1\|449369_450683_-\|short-chain-fatty-acid-transporter	unknown	unknown	gnl\|CDD\|224942
NZ_CP017403.1\|WP_010929789.1\|460724_461243_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP017403.1\|WP_010929785.1\|446640_447846_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
NZ_CP017403.1\|WP_003814681.1\|465363_466341_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
NZ_CP017403.1\|WP_022997984.1\|445467_446445_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017403.1\|WP_003814694.1\|461353_462109_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP017403.1\|WP_003814720.1\|443692_444751_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP017403.1\|WP_003814701.1\|456532_457003_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP017403.1\|WP_003820700.1\|457091_457436_-\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
NZ_CP017403.1\|WP_010929791.1\|463529_464315_+\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|181723
NZ_CP017403.1\|WP_019247419.1\|466466_467639_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841

Protein	Function_ID	Function_description	E-value
NZ_CP017403.1\|WP_010929577.1\|454641_455592_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
NZ_CP017403.1\|WP_003814730.1\|451462_452197_-\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
NZ_CP017403.1\|WP_010929786.1\|447842_449354_+\|TAXI-family-TRAP-transporter-solute-binding-subunit	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.13066e-82
NZ_CP017403.1\|WP_003814685.1\|464381_465353_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
NZ_CP017403.1\|WP_033446199.1\|444880_445375_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.34959e-07
NZ_CP017403.1\|WP_003814728.1\|450873_451053_-\|hypothetical-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
NZ_CP017403.1\|WP_010929788.1\|457535_458936_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
NZ_CP017403.1\|WP_019247421.1\|455723_456122_-\|GTP-binding-protein	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
NZ_CP017403.1\|WP_003814691.1\|462304_463537_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
NZ_CP017403.1\|WP_003814726.1\|449369_450683_-\|short-chain-fatty-acid-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
NZ_CP017403.1\|WP_010929789.1\|460724_461243_-\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
NZ_CP017403.1\|WP_010929785.1\|446640_447846_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
NZ_CP017403.1\|WP_003814681.1\|465363_466341_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
NZ_CP017403.1\|WP_022997984.1\|445467_446445_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
NZ_CP017403.1\|WP_003814694.1\|461353_462109_+\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
NZ_CP017403.1\|WP_003814720.1\|443692_444751_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	4.18053e-89
NZ_CP017403.1\|WP_003814701.1\|456532_457003_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
NZ_CP017403.1\|WP_003820700.1\|457091_457436_-\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
NZ_CP017403.1\|WP_010929791.1\|463529_464315_+\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
NZ_CP017403.1\|WP_019247419.1\|466466_467639_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82

>NZ_CP017403.1|WP_019247421.1|455723_456122_-|GTP-binding-protein
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>NZ_CP017403.1|WP_010929577.1|454641_455592_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>NZ_CP017403.1|WP_003814730.1|451462_452197_-|DNA-polymerase-III-subunit-epsilon
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>NZ_CP017403.1|WP_003814728.1|450873_451053_-|hypothetical-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>NZ_CP017403.1|WP_003814726.1|449369_450683_-|short-chain-fatty-acid-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>NZ_CP017403.1|WP_010929786.1|447842_449354_+|TAXI-family-TRAP-transporter-solute-binding-subunit
MTMFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>NZ_CP017403.1|WP_010929785.1|446640_447846_+|sodium/glutamate-symporter
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>NZ_CP017403.1|WP_022997984.1|445467_446445_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>NZ_CP017403.1|WP_033446199.1|444880_445375_+|GNAT-family-N-acetyltransferase
MPQSYIVRTMRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>NZ_CP017403.1|WP_003814720.1|443692_444751_-|glycosyltransferase-family-2-protein
MFMYTEFRSQLLAGAGTSAAGQSARMAVLAGDGATGVQVSCVVPGLNEAANLRVLVPALRACLEQWCASWEIIVVDDGSTDDTAELMAQWSAVEGIRYVQLSRNFGKEAALTAGLEAADGDAVICLDADMQHPPELIGDMLAAWRNGADMVYAVRRQRDDEPWFKRVGARAFYRLLSTARGVEVPPHAGDFRLMDRRVVEALVALPERTRFMKGLYAWVGFKSQAVPYTPQARRHGASHFSAWKLFRLACDGLTAFTTWPLRLVSLIGVLFALLSLSYGGYLVADYLISGNAVSGWTTIVTALLFFAGINLISLGVVGEYVARIFDEVKGRPLFIARQRRGRAKRAAKARSQ
>NZ_CP017403.1|WP_003814701.1|456532_457003_-|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>NZ_CP017403.1|WP_003820700.1|457091_457436_-|TIGR01244-family-phosphatase
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>NZ_CP017403.1|WP_010929788.1|457535_458936_-|PLP-dependent-aminotransferase-family-protein
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>NZ_CP017403.1|WP_010929789.1|460724_461243_-|MgtC/SapB-family-protein
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>NZ_CP017403.1|WP_003814694.1|461353_462109_+|TerC-family-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>NZ_CP017403.1|WP_003814691.1|462304_463537_+|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>NZ_CP017403.1|WP_010929791.1|463529_464315_+|crotonase/enoyl-CoA-hydratase-family-protein
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>NZ_CP017403.1|WP_003814685.1|464381_465353_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>NZ_CP017403.1|WP_003814681.1|465363_466341_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>NZ_CP017403.1|WP_019247419.1|466466_467639_+|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR

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Crispr_ID: NZ_CP017403_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017403_2

689594-689703

Orphan

Consensus_repeat	Method
GGGGACAGATACCGTCTTGGCCGTCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017403_2

>merge|NZ_CP017403|2|689594-689703|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAAGCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGCGGGGACAGATACCGTCTTGGCAGTCAA

>NZ_CP017403|2|2|689594-689703|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAA	GCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGC
GGGGACAGATACCGTCTTGGCAGTCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017403.1\|WP_019247959.1\|700057_703036_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
NZ_CP017403.1\|WP_003814739.1\|690955_691741_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
NZ_CP017403.1\|WP_003814250.1\|676522_677338_-\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
NZ_CP017403.1\|WP_010931362.1\|677450_678329_-\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
NZ_CP017403.1\|WP_005013747.1\|703389_704340_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017403.1\|WP_014905422.1\|686359_687310_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017403.1\|WP_003814742.1\|689199_689592_+\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|224679
NZ_CP017403.1\|WP_003814239.1\|684153_684855_-\|response-regulator	unknown	unknown	gnl\|CDD\|181883
NZ_CP017403.1\|WP_010927090.1\|693255_694056_-\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
NZ_CP017403.1\|WP_003820957.1\|678440_680204_-\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	unknown	unknown	gnl\|CDD\|235424
NZ_CP017403.1\|WP_010931353.1\|704336_705425_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187652
NZ_CP017403.1\|WP_010927010.1\|682729_684154_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP017403.1\|WP_023994844.1\|687405_688377_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP017403.1\|WP_010931355.1\|694076_694847_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|369777
NZ_CP017403.1\|WP_003818344.1\|698252_699131_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
NZ_CP017403.1\|WP_010931356.1\|691835_693245_-\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|182727
NZ_CP017403.1\|WP_010931357.1\|688381_689062_-\|tellurite-resistance-TerB-family-protein	unknown	unknown	gnl\|CDD\|377342
NZ_CP017403.1\|WP_010931354.1\|694889_695357_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
NZ_CP017403.1\|WP_005013747.1\|695353_696304_-\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017403.1\|WP_010931361.1\|680319_681660_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587

Protein	Function_ID	Function_description	E-value
NZ_CP017403.1\|WP_019247959.1\|700057_703036_-\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
NZ_CP017403.1\|WP_003814739.1\|690955_691741_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
NZ_CP017403.1\|WP_003814250.1\|676522_677338_-\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
NZ_CP017403.1\|WP_010931362.1\|677450_678329_-\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
NZ_CP017403.1\|WP_005013747.1\|703389_704340_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
NZ_CP017403.1\|WP_014905422.1\|686359_687310_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.10991e-23
NZ_CP017403.1\|WP_003814742.1\|689199_689592_+\|OsmC-family-protein	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
NZ_CP017403.1\|WP_003814239.1\|684153_684855_-\|response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
NZ_CP017403.1\|WP_010927090.1\|693255_694056_-\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
NZ_CP017403.1\|WP_003820957.1\|678440_680204_-\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
NZ_CP017403.1\|WP_010931353.1\|704336_705425_-\|NAD(P)H-binding-protein	gnl\|CDD\|187652	cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs. 5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.76863e-97
NZ_CP017403.1\|WP_010927010.1\|682729_684154_-\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
NZ_CP017403.1\|WP_023994844.1\|687405_688377_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	2.71001e-129
NZ_CP017403.1\|WP_010931355.1\|694076_694847_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
NZ_CP017403.1\|WP_003818344.1\|698252_699131_-\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
NZ_CP017403.1\|WP_010931356.1\|691835_693245_-\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
NZ_CP017403.1\|WP_010931357.1\|688381_689062_-\|tellurite-resistance-TerB-family-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
NZ_CP017403.1\|WP_010931354.1\|694889_695357_+\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
NZ_CP017403.1\|WP_005013747.1\|695353_696304_-\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
NZ_CP017403.1\|WP_010931361.1\|680319_681660_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123

>NZ_CP017403.1|WP_003814742.1|689199_689592_+|OsmC-family-protein
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>NZ_CP017403.1|WP_010931357.1|688381_689062_-|tellurite-resistance-TerB-family-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>NZ_CP017403.1|WP_023994844.1|687405_688377_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>NZ_CP017403.1|WP_014905422.1|686359_687310_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVRS
>NZ_CP017403.1|WP_003814239.1|684153_684855_-|response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>NZ_CP017403.1|WP_010927010.1|682729_684154_-|HAMP-domain-containing-protein
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>NZ_CP017403.1|WP_010931361.1|680319_681660_+|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>NZ_CP017403.1|WP_003820957.1|678440_680204_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>NZ_CP017403.1|WP_010931362.1|677450_678329_-|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>NZ_CP017403.1|WP_003814250.1|676522_677338_-|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK
>NZ_CP017403.1|WP_003814739.1|690955_691741_-|enoyl-ACP-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>NZ_CP017403.1|WP_010931356.1|691835_693245_-|transglycosylase-SLT-domain-containing-protein
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>NZ_CP017403.1|WP_010927090.1|693255_694056_-|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>NZ_CP017403.1|WP_010931355.1|694076_694847_+|methyltransferase-domain-containing-protein
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>NZ_CP017403.1|WP_010931354.1|694889_695357_+|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>NZ_CP017403.1|WP_005013747.1|695353_696304_-|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>NZ_CP017403.1|WP_003818344.1|698252_699131_-|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>NZ_CP017403.1|WP_019247959.1|700057_703036_-|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>NZ_CP017403.1|WP_005013747.1|703389_704340_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>NZ_CP017403.1|WP_010931353.1|704336_705425_-|NAD(P)H-binding-protein
MTGSTAGKVLVVGALGVVGRAALEHFGQRPGLARVGLSRHAPDFAPEASWVSADLRDAQATRAALAAHGDATHVVYAALNEQPDLLKGWRDSGNVDLNTGMLRNTLDALREAPLRHVTLLQGTKAYGVHTGRPMPVPARETDAVRDHANFYFDQQDLLAERAAAQGFGWTIFRPQIVLGVALGSAMNPVATLGAYAALSREAGQPLRYPGHPHLLTECTDARLIARAIAWAWDEPRAHGEAFNIANGDVVLWQPVFERLAALFGMPLGEPVDTRMREAMPQLAERWRAIAERERLAVPELRDLIGLSWQYADATWAARHPLPVPPLVSTIKLRQAGFGDCIDTQDCIVEHLREMQRLRYLPR

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Crispr_ID: NZ_CP017403_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017403_3

2993301-2993417

Orphan

Consensus_repeat	Method
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017403_3

>merge|NZ_CP017403|3|2993301-2993417|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAAGGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGTTTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

>NZ_CP017403|3|3|2993301-2993417|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	GGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGT
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017403.1\|WP_010930189.1\|3006100_3006403_+\|membrane-protein	unknown	unknown	unknown
NZ_CP017403.1\|WP_005012067.1\|2982717_2983668_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017403.1\|WP_010930196.1\|2988866_2992793_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|378762
NZ_CP017403.1\|WP_019248398.1\|2985251_2986220_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP017403.1\|WP_010926448.1\|3002641_3003746_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP017403.1\|WP_010930201.1\|2976682_2979379_+\|alpha-ketoglutarate-dehydrogenase	unknown	unknown	gnl\|CDD\|237267
NZ_CP017403.1\|WP_010928340.1\|2997040_2997868_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|238635
NZ_CP017403.1\|WP_023853218.1\|2999915_3000857_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226706
NZ_CP017403.1\|WP_010930202.1\|2976068_2976557_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP017403.1\|WP_003816844.1\|2984336_2985182_-\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
NZ_CP017403.1\|WP_003812405.1\|2983714_2984269_-\|transcription-elongation-factor-GreB	unknown	unknown	gnl\|CDD\|179345
NZ_CP017403.1\|WP_010930190.1\|3004537_3006058_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_CP017403.1\|WP_019248079.1\|2993528_2996759_-\|autotransporter-SphB3	unknown	unknown	gnl\|CDD\|377133
NZ_CP017403.1\|WP_029443925.1\|2986219_2988694_-\|DNA-internalization-related-competence-protein-ComEC/Rec2	unknown	unknown	gnl\|CDD\|273036
NZ_CP017403.1\|WP_095585339.1\|2981986_2982619_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|339870
NZ_CP017403.1\|WP_010926447.1\|3003775_3004531_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180796
NZ_CP017403.1\|WP_010930191.1\|3000838_3002539_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
NZ_CP017403.1\|WP_019247537.1\|2998589_2999870_-\|lipoprotein-releasing-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274034
NZ_CP017403.1\|WP_010930200.1\|2979533_2981816_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
NZ_CP017403.1\|WP_003812422.1\|2997901_2998597_-\|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD	unknown	unknown	gnl\|CDD\|213222

Protein	Function_ID	Function_description	E-value
NZ_CP017403.1\|WP_005012067.1\|2982717_2983668_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
NZ_CP017403.1\|WP_010930196.1\|2988866_2992793_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	gnl\|CDD\|378762	pfam11924, IAT_beta, Inverse autotransporter, beta-domain. This is a family of beta-barrel porin-like outer membrane proteins from enteropathogenic Gram-negative bacteria. Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They carry C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal beta domains that are embedded in the outer membrane. This family represents the beta-barrel porin-like domain in the outer membrane that can be found in intimins, invasins and some inverse autotransporters.	8.97198e-85
NZ_CP017403.1\|WP_019248398.1\|2985251_2986220_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.0858e-13
NZ_CP017403.1\|WP_010926448.1\|3002641_3003746_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP017403.1\|WP_010930201.1\|2976682_2979379_+\|alpha-ketoglutarate-dehydrogenase	gnl\|CDD\|237267	PRK13012, PRK13012, 2-oxoacid dehydrogenase subunit E1; Provisional.	0
NZ_CP017403.1\|WP_010928340.1\|2997040_2997868_-\|TatD-family-hydrolase	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.42767e-89
NZ_CP017403.1\|WP_023853218.1\|2999915_3000857_+\|hypothetical-protein	gnl\|CDD\|226706	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown].	1.27171e-20
NZ_CP017403.1\|WP_010930202.1\|2976068_2976557_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.95114e-53
NZ_CP017403.1\|WP_003816844.1\|2984336_2985182_-\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	1.79612e-72
NZ_CP017403.1\|WP_003812405.1\|2983714_2984269_-\|transcription-elongation-factor-GreB	gnl\|CDD\|179345	PRK01885, greB, transcription elongation factor GreB; Reviewed.	4.04513e-99
NZ_CP017403.1\|WP_010930190.1\|3004537_3006058_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP017403.1\|WP_019248079.1\|2993528_2996759_-\|autotransporter-SphB3	gnl\|CDD\|377133	pfam03797, Autotransporter, Autotransporter beta-domain. Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.	3.21051e-45
NZ_CP017403.1\|WP_029443925.1\|2986219_2988694_-\|DNA-internalization-related-competence-protein-ComEC/Rec2	gnl\|CDD\|273036	TIGR00361, Recombination_protein_2, DNA internalization-related competence protein ComEC/Rec2. Apparant orthologs are found in 5 species so far (Haemophilus influenzae, Escherichia coli, Bacillus subtilis, Neisseria gonorrhoeae, Streptococcus pneumoniae), of which all but E. coli are model systems for the study of competence for natural transformation. This protein is a predicted multiple membrane-spanning protein likely to be involved in DNA internalization. In a large number of bacterial species not known to exhibit competence, this protein is replaced by a half-length N-terminal homolog of unknown function, modelled by the related model ComEC_N-term. The role for this protein in species that are not naturally transformable is unknown. [Cellular processes, DNA transformation].	6.30664e-64
NZ_CP017403.1\|WP_095585339.1\|2981986_2982619_+\|fimbrial-protein	gnl\|CDD\|339870	pfam16970, FimA, Type-1 fimbrial protein, A. FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.	4.41459e-22
NZ_CP017403.1\|WP_010926447.1\|3003775_3004531_+\|SDR-family-oxidoreductase	gnl\|CDD\|180796	PRK07023, PRK07023, SDR family oxidoreductase.	5.47641e-103
NZ_CP017403.1\|WP_010930191.1\|3000838_3002539_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
NZ_CP017403.1\|WP_019247537.1\|2998589_2999870_-\|lipoprotein-releasing-ABC-transporter-permease-subunit	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	6.22467e-159
NZ_CP017403.1\|WP_010930200.1\|2979533_2981816_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_CP017403.1\|WP_003812422.1\|2997901_2998597_-\|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.7791e-114

>NZ_CP017403.1|WP_010930196.1|2988866_2992793_-|inverse-autotransporter-beta-barrel-domain-containing-protein
MNKNIYRVVWSLVRGAWVVAGEWARAGRKSSSPRRQNRQRARRGVAAMVGGSILAQALLPLSALAQGAPTLRPARVAQEEAGQDAAWTRKLAAQAESLARRQAERQPGARVDGDYLKREAQAQVNDVLRDGVNLARESGLPFLRNLQGGLSHDFESGRTSLQLNTIDEVYRAGRNTGLLQLGAHNQNDRPTANAGAVYRREVNDALMVGANGFLDYEFGKQHLRGSVGLEVIAPEFSLYGNVYAPLSDWKGAKRNNRREEKPASGMDVGVGYRPAFAPGLSLSATHFRWNGAEVDYFDNGRTQAGAKGFKVGVEYRPVSLVSVGLEQTKVIGGGRETRMQLGLNINLSEPLSKQLRRDASGTPAFSPDARRHALVERENRIVLNTRRKEIILPLVVSKVSTLQADGRVTVIGATQPFATVTVRMPDGMTGTATADASGRFAYTSAGDQPSGVLALRARNAEGDSSREVTYRYVDEVVLGDLQVAVMALVPLPADRALEVRGKTEPKVDVKVSFSNGESVLAKADAKGLFTVRSTRKVTQGKVLVQATHPQTRKEARAVADYLPPATLAPTIDAVTAQADTGRVTVTGQAEPGAQVDVHFPDGTAKTVDAGADGAYAATSDGDMVSGDIHAQATDKAGNQSPEATRHYGDTTDITPPAAPTIANVATDATSGRVTAAGMAEPGANVTVNFPDGTRKTVVAGGDGAYTATSDRDMVSGDIRVQATDKAGNQSPEATRAYADAVDRTAPEVPTVTHVATDAKSGRITVTGMAEPGANVTVNFPDGTRKTAVAGGDGAYTATSDGDMVSGDIRVQATDKAGNRSPEATRAYADTVDTTPPAVPTITDVTTDATNGRITVTGVAEPGANVTVDFPDGTRKTVVAGGDGAYTATSDRDMASGDVRVQAIDKGGNRSPEATRAYADTVDKTAPAAPTITNVTTDAASGRITVTGMAEPGANVAVNFPDGTRKTVVADGAGAYAADSDGDMVAGDIHVQATDKAGNRSPEGTRAYVDTVDKTPSAAPTIVRVTTDRSSGVVTVAGTADPDNDVTVQFPDGGRKTVKAGKDGSYSVTSDNDIFSGIIQVSARNPAGNASPEVRQDYRDEFVPANAITNIETNSRNGIVTVSGKTSPDATVVVSFPGGDEARTRAKGDGTFSVSSPMDIPRGVVSLSTEVNGVQTVVATRTYEDKFTKGGLDFTAFLPYTPKFNGVSTSDTSAVLLSIPRYFYSGGAPVAKIMPPEADGSEFAKRAAAAMRAQVTPGRDSSEYDVRVSWPAGTFTPADVGQRADLAVKVFDKGTGKYMLLLAPVNFPY
>NZ_CP017403.1|WP_029443925.1|2986219_2988694_-|DNA-internalization-related-competence-protein-ComEC/Rec2
MTAMDAAMGRAMGWAFVAGTAMVQGLATLDGVVGIACLAALGALAAWRAARRPGRSWRVCRKLVLPALAASLGVASAAGQAQWRLADAVDPARHNRVARVDARVAQLAQGDAGSRRFVARLPDDRPAGLPARLLVTWRALPGQALPEVVPGQRWRMALRVRRPHASQNPHAADTEARLLARGVRGLASVRGRPLLLDDDPWADAGIAIERARHRVRAGMRQALAGLRYAPVLVALAIGDQAGVAREDWQVFQRSGIMHLVSISGMHVTAVAALGGWLAGWLWRRACWRGVPLAERAPAQRVAVLAALGPALAYCLLAGWSVPTRRAFFMLAAVAAAVALRWPATPSRLLTLAAVAVAVLDPWAPLAPGFWLSFGAVAVLVGTGAGARPRGMRARLRAALLGFGRTQMAVTLALTPLLAFLVRQVSLGSPLANALAIPVVSLAVTPLALLCGALSALPGGQGPAWLAGAAGHGLFALLMAPVDWIGRAEWSGLDVAAAPWPWLALALAGAAWALQAPGWPARHCGWLCMLPLLVWRPERPPPGYWTLTALDVGQGGAVVLETARHVLLFDTGPRHGDASDAGERVIAPFLWARGYRHIDTLVVSHADLDHTGGLRSVLAALPVGQAYASFDLAAWLARQARVRPDGWRAAPRMPPATRGCEAGVQWRVDGVRLRFVYPPSLAAPLPWRSSNARSCVLLVEGVGHRALLTGDVGLVQEAAFAAALPPVDLVMAPHHGSAMSSGSLLTAATRPAHAIAQAGYLNRFGHPAASAINRWRRAGAAVWRTDLDGAVRADSTPRGLFASGQRQVARRYWRDSRAGPDAPLR
>NZ_CP017403.1|WP_019248398.1|2985251_2986220_-|alpha/beta-hydrolase
MGHRRPSGPRRGDIMQEPRLDFVTCASPTGFHRMAYWEWGDPLNDRVLVCVHGLTRTGRDFDHLARRLAGQWRVVCPDVAGRGKSDWLSNPALYAVPQYVSDMATLIARVWPATLAWVGTSMGGLIGLGLAGAATMMRLARAMRPRPDGLPAQADDLRLHRLVLNDVGPRLNVEVLQRIAGNVAAQDSYSTFEAAVAAMRQISTTFGPHTDAQWDELARHIYVRQGGGWVRHFDPALAVPLGAQVAQAFEAGERILWQAYDSLDCPVLIVRGQDSDLLSAATAGEMLARNPRARLHEVPGVGHAPTLMTPEQIEPIARFLQE
>NZ_CP017403.1|WP_003816844.1|2984336_2985182_-|PHP-domain-containing-protein
MNIAAPNVDLHCHSTVSDGSMPPAAVARRAHANGVDVWALTDHDEIGGVAEAAQAAAALGMRFVAGVEISVTWAGLTVHIVGLRVDPANEALVQGLRDTRAGRAARAVQIGERLAGLGMPGAYEGALPFAGNPELISRTHFARFLVEAGYCPDVQTVFNKYLGDDCPGHVPMQWASLAEAVGWIRGAGGCAVIAHPGRYKYSPMQFDALYDEFLQLGGTGIEVVTGSHTSEEARRYAEVARRHGFLASRGSDFHSPTESRVDLGRLPPLPPDLKPVWHDWF
>NZ_CP017403.1|WP_003812405.1|2983714_2984269_-|transcription-elongation-factor-GreB
MNKAFVKESDRDDEDDLPEAQALPAGTRNYMTPQGYARLRDELSHLMNVERPSVVQVVSWAASNGDRSENGDYLYGKKRLREIDRRMRFLTKRLDIAEVVDPAAQPNRDQVFFGATVLYMDRAGEERTVTIVGVDEAEPLAGKISWISPVARALTKAHEGDTVTLRTPGGVEELEILEVRYPDA
>NZ_CP017403.1|WP_005012067.1|2982717_2983668_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>NZ_CP017403.1|WP_095585339.1|2981986_2982619_+|fimbrial-protein
MLPMQIPFQRALRLCLRAALAAIASAAHADDGTIVITGTITDTTCVIEDPSGPNHTKVVQLPKISKNALKANGDQAGRTPFIIKLKDCPSSLGNGVKAYFEPGPTTDYSTGDLRAYKMVYATNPQTQLSNITAATEAQGVQVRISNLNDSKITMGANEATQQAAGFDPEVQTGGTSKTVTMRYLASYVKKNGDVEASAITTYVGFSVVYP
>NZ_CP017403.1|WP_010930200.1|2979533_2981816_+|NADP-dependent-malic-enzyme
MDENLTKLALDYHAYPTPGKISVTPTKTLANQDDLSLAYSPGVAAACMAIFDQGNDAASKYTSRSNLVGVITNGTAVLGLGNIGSLAAKPVMEGKGCLFKKFAGIDVFDIELAENDPDKLVDIIAALEPTLGGVNLEDIKAPECFYIEKKLRERMNIPVFHDDQHGTAIISSAAILNGLKVVGKDIGQVKLACSGAGAAAIACLDLLVHLGIKREHIYVVDSRGVIWEGRDENMEPNKRRYAQKTEARTLADVVNGADVFLGCSTAGVLTPEMVKTMAAQPLILALANPEPEIRPELAKAARPDCIVATGRSDYPNQVNNVLCFPFIFRGALDAGATRITEEMKLACVKAIAELAQAEQNDEVARAYAGQELSFGPDYIIPKPFDPRLIVQIAPAVAQAAADSGVATRPIEDIEAYRQKLMGFVYHSGQLMRPLFQQAKQAPKRVVYADGEDERVLRAVQTVIDEKLAEPILVGRPSVIEMRIKKFGLRMVPGQNVEIVDPEDDSRFNDTWNGYYQLRGREGVTPAIAKAMIRKHNTLIGAMLLRRGDADALLCGVASKYDNQLKYVEEVIGRKPGQTYGALNVLMLPNQTLFVTDTHVNENPSADEIANITIQAAEEMLRFGVMPKIALLSHSNFGSRPTDSSRKMAHARKLVAERAPHLEVDGEMHADAALSESIRLQAYPDSTLKGRANLLVMPNLDTGNITYNMLKMTGSNGIAMGPILLGSARPVHILTTSATVRRIVNMTALAVVDAQQEAAEG
>NZ_CP017403.1|WP_010930201.1|2976682_2979379_+|alpha-ketoglutarate-dehydrogenase
MCNAQAGATPPQIPDPDPVETAEWCEALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQEPPFPGNLSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHFFRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLNDVDLAHFRQEITAGAQGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESIAALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWDALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRLRRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLAFRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVADWARFALQAAGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYSAQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYYSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYDPAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRAADATPQVRLLGAGPMLDEAMRAAQLLRDEHGLDAEVWSVTSFSELARGGRGAERAQALGLPCPDGNWLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDGFGHSDTRARLRDFFEVGAPWIVLHALDLLAREDSAWQPALQARREQLQAATRNVPSWQS
>NZ_CP017403.1|WP_010930202.1|2976068_2976557_-|Lrp/AsnC-family-transcriptional-regulator
MPPHALDAIDRRILDLLQTDASLTNVELARRVHLSPSPCLARVKALEAAGIIRGYVALADPAQLGLNLNVFIQVSLEKQVESELERFQGAMADCPEVMECYLMTGDADYLLRVVVADMPGLERFIVNRLSRIPGVKNIRSGFALKQVKYQTALPLRQGSGPQ
>NZ_CP017403.1|WP_019248079.1|2993528_2996759_-|autotransporter-SphB3
MAQASARGMGLRITSLAAALLGVYGAAGAAENRLECIGACPPGQPVAGAHYSGTNLSANREWVVYGEGSNAVFTLQGGSVTASGGLMGAVNAADGARVYLNQVSVRTDAGNGWEAPGVRAEYGALVNVRGGSIATVGGGSYGVQSLDSGTMIELNGTDIRTTDAYSDGLRAEFGGSIRAVGLTINTTGEHTVGAMGADDGTIALRDSRITTSGVDAYGLGTESQVLSPGGVLQVSNTAIQTSGKNAHGVYLQGGSSLNMSGGSIRTTGSGAAGLRVSNGSSVALNGVEVVASGPSLLSTLSATRQQSIVVGAGSNLTRNDGRLLLVRRVAGGELGQVTLTLKSGSYAAGNIENLAADGSRESSALTIVDVQSGAQWAGLVIDDTTAIVNGSQSGQHSGFSTAGDMVLEGGSAPVTFTGVSNIGGSSSLGAGSQTTFGGATTIGQSLAVLPGGSVAFNGPLTIGESVTEGQGTALSFNAPAIIGANVQGAGGAAFTFSGPAQVGGSVQGLDGASFRFSTSAPTAIAGGLSLAGGSSLGGGSPTTPIVVIGGADAVSGAILGGNLDIGGALRMTGASLAPGNSIGTVTVGSVGALSGSTYLAEVNAKGQSDLLVVRSGNVDLAGVSLVVGQENGTGGYVLNHDYTIIKTEAGKIVGEFAAASLDESLASTLVKLDPVKYGAQATQVSLSPDADKLAAARAGLIRNQSAVLDGALSVAGRNASADAVMLMSDTGQRADALDQLSGEVHGSAVSALYSNTQLLNRTVARRMSANLGAGLLAGAPTAQAAGPAAASAMPGTAAYPLWADVVDNWSSFDAKDNAAKAKSNTAGLFIGGDAAVGAGWRVGGALGFTDGRIKADAVDSRSDVTSYTAALYGGNSWAAGKGKLNFLAGVGYTHHDIDSRRSVDVGGAQTLKADYKANTTQLFAELGYQVPVGASSSVEPYAGLAWFNNHSDSFDEDGGPAALHGSGQTDQITTFTLGLRGNTALQLGATETRLSAGLGWRHANGDVDATRKLAFIQGGGTAFTVAGSPVAREAAVLDLAAEVDVGRNAALGLAYGGQFGNGNKENTGSLYLKVRF
>NZ_CP017403.1|WP_010928340.1|2997040_2997868_-|TatD-family-hydrolase
MLIDTHCHLDAAEFDADRMAVARAAREAGVQAIVIPAVERANFATVRQLAHAVDSGAYALGIHPLYVARARDEDLDSLRRAIESALPDPRFVAIGEIGLDFFVAEIASGAPRERQERFYAAQLDLAAEYGLPVLLHVRRSQDILLKHLRRRPGVPGGIAHAFNGSAQQAGAFVEQGFALGLGGAMTYPRALQIRRHAADIGLDHLVLETDAPDIPPAWLYEPERRNTPGQLPRIAAELAALRGQAVADVARATTTTALRVLPRLGALLQDRAATP
>NZ_CP017403.1|WP_003812422.1|2997901_2998597_-|lipoprotein-releasing-ABC-transporter-ATP-binding-protein-LolD
MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAGLSEKRKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVALARALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLHMENGRLQPD
>NZ_CP017403.1|WP_019247537.1|2998589_2999870_-|lipoprotein-releasing-ABC-transporter-permease-subunit
MLKIPYELWIGARYAGMARIRQRRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTAGVRLRVADMQRAPEVAAELTKVLPPYVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSDPQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRHD
>NZ_CP017403.1|WP_023853218.1|2999915_3000857_+|hypothetical-protein
MLIVIPGALPAAAVAPELARLLPQHAPTLHGWLQAASARVQAFDAARQGCTPFEGWQLEQAGYQPQPGLPLGAGLGPLRAAGGTPGQPVWLADLAHLMLGADQAALLDPALLDLRADESAQLFEAAAPLFADSGFGATPIDAARWRLTLPAGMAPQTASPAAVAGQRLRAWWTQDVAMRPWRRLLNEIQMVWYEHPVNEARAARGAAPINALWLYGGATPWPAGAPAPARVCDELAATQRAGDWAAWLDALAMLDAAQLAPLAGPHGRPVQPLQLLLLGDDRRAALTLKPRAGLARWLPAPKHNWNAWWSRPV
>NZ_CP017403.1|WP_010930191.1|3000838_3002539_+|single-stranded-DNA-specific-exonuclease-RecJ
MVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVIHPEQTRMAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADVDFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITDHHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFALGPRINAAGRLADMSLGIACLTTDDEAQTLEMARELDNINRERRTIEAEMRDQALAAMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPDVHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
>NZ_CP017403.1|WP_010926448.1|3002641_3003746_+|peptide-chain-release-factor-2
MEAERQNQLVARLEDYAEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQGV
>NZ_CP017403.1|WP_010926447.1|3003775_3004531_+|SDR-family-oxidoreductase
MTDTVAILTGASRGLGAALARGLLAPGTRLITLARRADPDLEAAARTRGASLEQVQVDLSDPAAAGAAAKRLCAALPRDARRYLLINNAGTVSPVAQAAGLTDGAAIAGALNLNVTAVVLLTARFVAALQGLPADRRVLNISSGAGRNPNAGWGVYCAAKAALDMYSRVLKQEQGQDGVRVVALAPGIVDTDMQGAIRASDPADFPALERFREFHATGKLSAPADVAARILAYLDRDDFGTTEIDDIRNYQ
>NZ_CP017403.1|WP_010930190.1|3004537_3006058_+|lysine--tRNA-ligase
MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNNFVPDAHAADLHARYDGLDQEALTAAAVTVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFPHLRRED
>NZ_CP017403.1|WP_010930189.1|3006100_3006403_+|membrane-protein
MAALAYLLLSRRARPAAAPRPLRALPAGRRRMPLYLGVAAVLALAGALLSAFLLVTAMAGGSGGGYRGQADFLQQVAIVLLAIGVVCAIAALVSFFRQRG

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Crispr_ID: NZ_CP017403_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017403_4

3885662-3885746

Orphan

Consensus_repeat	Method
CTGTCCCCGCGGGGACAGGCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017403_4

>merge|NZ_CP017403|4|3885662-3885746|CRISPRCasFinder
CTGTCCCCGCGGGGACAGGCACCCTGTCATACGCCATGAACGCTTGACGGCCAAGACGGTATCTGTCCCCGCGGGGACAGGCACC

>NZ_CP017403|4|4|3885662-3885746|CRISPRCasFinder
CTGTCCCCGCGGGGACAGGCACC	CTGTCATACGCCATGAACGCTTGACGGCCAAGACGGTAT
CTGTCCCCGCGGGGACAGGCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017403.1\|WP_010929706.1\|3880103_3880640_+\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
NZ_CP017403.1\|WP_010929707.1\|3878560_3879952_-\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
NZ_CP017403.1\|WP_003814321.1\|3873619_3875374_-\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
NZ_CP017403.1\|WP_003814337.1\|3884709_3885651_+\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
NZ_CP017403.1\|WP_010929702.1\|3888455_3889811_+\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997
NZ_CP017403.1\|WP_003814356.1\|3894957_3896001_+\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
NZ_CP017403.1\|WP_003814351.1\|3890317_3891274_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
NZ_CP017403.1\|WP_010929703.1\|3887756_3888455_+\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
NZ_CP017403.1\|WP_033461782.1\|3882823_3884713_+\|DNA-mismatch-repair-endonuclease-MutL	unknown	unknown	gnl\|CDD\|234630
NZ_CP017403.1\|WP_019247543.1\|3880570_3881956_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
NZ_CP017403.1\|WP_003814358.1\|3896044_3896788_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP017403.1\|WP_010929709.1\|3875480_3876380_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
NZ_CP017403.1\|WP_033446171.1\|3882098_3882719_-\|membrane-protein	unknown	unknown	gnl\|CDD\|182775
NZ_CP017403.1\|WP_003814363.1\|3897809_3898220_-\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|131478
NZ_CP017403.1\|WP_010929704.1\|3887058_3887760_+\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
NZ_CP017403.1\|WP_003814324.1\|3876444_3877428_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
NZ_CP017403.1\|WP_010929708.1\|3877563_3878544_+\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
NZ_CP017403.1\|WP_003814339.1\|3885756_3886806_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP017403.1\|WP_010929701.1\|3889807_3890299_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
NZ_CP017403.1\|WP_003814355.1\|3892684_3894787_-\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|129868

Protein	Function_ID	Function_description	E-value
NZ_CP017403.1\|WP_010929706.1\|3880103_3880640_+\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
NZ_CP017403.1\|WP_010929707.1\|3878560_3879952_-\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_CP017403.1\|WP_003814321.1\|3873619_3875374_-\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
NZ_CP017403.1\|WP_003814337.1\|3884709_3885651_+\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
NZ_CP017403.1\|WP_010929702.1\|3888455_3889811_+\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
NZ_CP017403.1\|WP_003814356.1\|3894957_3896001_+\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
NZ_CP017403.1\|WP_003814351.1\|3890317_3891274_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
NZ_CP017403.1\|WP_010929703.1\|3887756_3888455_+\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
NZ_CP017403.1\|WP_033461782.1\|3882823_3884713_+\|DNA-mismatch-repair-endonuclease-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
NZ_CP017403.1\|WP_019247543.1\|3880570_3881956_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	1.25625e-84
NZ_CP017403.1\|WP_003814358.1\|3896044_3896788_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
NZ_CP017403.1\|WP_010929709.1\|3875480_3876380_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
NZ_CP017403.1\|WP_033446171.1\|3882098_3882719_-\|membrane-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	8.25718e-70
NZ_CP017403.1\|WP_003814363.1\|3897809_3898220_-\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47
NZ_CP017403.1\|WP_010929704.1\|3887058_3887760_+\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
NZ_CP017403.1\|WP_003814324.1\|3876444_3877428_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
NZ_CP017403.1\|WP_010929708.1\|3877563_3878544_+\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
NZ_CP017403.1\|WP_003814339.1\|3885756_3886806_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP017403.1\|WP_010929701.1\|3889807_3890299_+\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
NZ_CP017403.1\|WP_003814355.1\|3892684_3894787_-\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96

>NZ_CP017403.1|WP_003814337.1|3884709_3885651_+|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>NZ_CP017403.1|WP_033461782.1|3882823_3884713_+|DNA-mismatch-repair-endonuclease-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPATTALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>NZ_CP017403.1|WP_033446171.1|3882098_3882719_-|membrane-protein
MVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>NZ_CP017403.1|WP_019247543.1|3880570_3881956_+|N-acetylmuramoyl-L-alanine-amidase
MVERDCPPAHGALSPRAAARRRLISVAATLLVLPVVPRLAHAATILAVRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>NZ_CP017403.1|WP_010929706.1|3880103_3880640_+|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>NZ_CP017403.1|WP_010929707.1|3878560_3879952_-|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>NZ_CP017403.1|WP_010929708.1|3877563_3878544_+|AEC-family-transporter
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>NZ_CP017403.1|WP_003814324.1|3876444_3877428_-|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>NZ_CP017403.1|WP_010929709.1|3875480_3876380_+|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>NZ_CP017403.1|WP_003814321.1|3873619_3875374_-|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD
>NZ_CP017403.1|WP_003814339.1|3885756_3886806_-|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>NZ_CP017403.1|WP_010929704.1|3887058_3887760_+|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>NZ_CP017403.1|WP_010929703.1|3887756_3888455_+|HAD-IB-family-hydrolase
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>NZ_CP017403.1|WP_010929702.1|3888455_3889811_+|polynucleotide-adenylyltransferase-PcnB
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>NZ_CP017403.1|WP_010929701.1|3889807_3890299_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>NZ_CP017403.1|WP_003814351.1|3890317_3891274_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>NZ_CP017403.1|WP_003814355.1|3892684_3894787_-|TRAP-transporter-large-permease-subunit
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>NZ_CP017403.1|WP_003814356.1|3894957_3896001_+|TRAP-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>NZ_CP017403.1|WP_003814358.1|3896044_3896788_+|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>NZ_CP017403.1|WP_003814363.1|3897809_3898220_-|4-carboxymuconolactone-decarboxylase
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

27282 : 70038

Synechococcus_phage(50.0%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010929577.1\|27282_28233_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023995007.1\|28314_28650_-	CoA transferase	NA	NA	NA	NA
WP_010929578.1\|28674_29109_-	hypothetical protein	NA	NA	NA	NA
WP_019247164.1\|29141_30359_-	thiolase family protein	NA	NA	NA	NA
WP_010929580.1\|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA
WP_019247165.1\|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010929582.1\|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010929583.1\|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_005012067.1\|34625_35576_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814398.1\|35572_36763_-	MFS transporter	NA	NA	NA	NA
WP_010929585.1\|37012_37924_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_010929586.1\|37925_40064_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003814404.1\|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_003814405.1\|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_010929587.1\|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_003814410.1\|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA
WP_050833520.1\|42687_43218_+	peptide deformylase	E3SLL2	Synechococcus_phage	2.9e-12	35.4
WP_023997043.1\|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA
WP_010930208.1\|43663_44614_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929589.1\|45200_45749_+	hypothetical protein	NA	NA	NA	NA
WP_003815265.1\|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003815255.1\|46084_46978_+	membrane protein	NA	NA	NA	NA
WP_010929590.1\|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_003817748.1\|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
WP_005012067.1\|50141_51092_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_029443813.1\|51134_52391_+	muropeptide transporter	NA	NA	NA	NA
WP_014906036.1\|52502_53567_+	porin	NA	NA	NA	NA
WP_010929592.1\|53624_54359_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
WP_019247224.1\|54364_54955_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
WP_003817737.1\|54979_55669_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_023852650.1\|55665_56427_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_010929594.1\|56506_57406_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005012808.1\|57499_58450_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929595.1\|59250_60477_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_047122776.1\|60476_60890_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010929597.1\|61079_62021_-	hypothetical protein	NA	NA	NA	NA
WP_019248755.1\|62444_63419_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010929599.1\|63475_64057_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_010929600.1\|64069_64372_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_029443770.1\|64490_65549_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_019247832.1\|65583_66855_-	TRAP transporter large permease	NA	NA	NA	NA
WP_010929603.1\|67484_68666_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_005012808.1\|69087_70038_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

185342 : 243846

Planktothrix_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014486111.1\|185342_186293_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929608.1\|186289_188164_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
WP_003807102.1\|189511_190216_-	DUF2837 family protein	NA	NA	NA	NA
WP_003807104.1\|190212_191319_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_010929610.1\|191580_192174_-	sugar transferase	NA	NA	NA	NA
WP_023853419.1\|192170_193358_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
WP_010929612.1\|193420_194680_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_010929613.1\|194703_195792_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
WP_010929614.1\|195799_196900_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
WP_003807114.1\|196903_197479_-	N-acetyltransferase	NA	NA	NA	NA
WP_003807115.1\|197482_198535_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_010929615.1\|198665_199673_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
WP_010929616.1\|199674_200961_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
WP_003807124.1\|200977_201133_-	hypothetical protein	NA	NA	NA	NA
WP_010929617.1\|201157_201961_-	type III pantothenate kinase	NA	NA	NA	NA
WP_010929618.1\|201957_202824_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_010929619.1\|202898_204029_+	ABC transporter permease	NA	NA	NA	NA
WP_003807131.1\|204028_204868_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
WP_010930208.1\|204981_205932_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929620.1\|206849_207452_+	hypothetical protein	NA	NA	NA	NA
WP_010929621.1\|207481_208135_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003807138.1\|208267_209524_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.2e-66	40.5
WP_023853421.1\|209604_210471_+	D-amino acid aminotransferase	NA	NA	NA	NA
WP_003818417.1\|210546_210822_+	YbeD family protein	NA	NA	NA	NA
WP_010929623.1\|210829_211492_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_003807146.1\|211553_212555_+	lipoyl synthase	NA	NA	NA	NA
WP_003807148.1\|212569_213118_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
WP_010929624.1\|213175_214072_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_010929625.1\|214068_215130_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
WP_010929626.1\|215165_216116_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010929627.1\|217015_218209_+	cystathionine beta-lyase	NA	NA	NA	NA
WP_010929628.1\|218290_218920_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA
WP_010927242.1\|218981_219665_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_023853376.1\|219674_221357_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_003815933.1\|221644_221992_+	DUF1840 domain-containing protein	NA	NA	NA	NA
WP_003815930.1\|222082_222400_+	hypothetical protein	NA	NA	NA	NA
WP_010930525.1\|222682_223699_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003815929.1\|223774_224575_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_003815927.1\|224571_225447_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_019248181.1\|225457_226750_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010929634.1\|226792_227833_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
WP_010929635.1\|227938_228760_-	phosphodiesterase	NA	NA	NA	NA
WP_005012067.1\|228860_229811_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_014905488.1\|229909_230815_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.8e-21	31.7
WP_003815918.1\|230811_231645_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_010929637.1\|232481_233492_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_019247800.1\|233488_233878_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_033446324.1\|234759_236025_+	amidase	NA	NA	NA	NA
WP_010929639.1\|236115_237816_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_010929640.1\|238242_238890_-	hypothetical protein	NA	NA	NA	NA
WP_050457416.1\|238888_240328_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_023853394.1\|240438_240723_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_010929512.1\|240750_241629_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005012067.1\|242895_243846_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

272629 : 334157

Diachasmimorpha_longicaudata_entomopoxvirus(10.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930892.1\|272629_273580_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929659.1\|275023_275926_-	YgcG family protein	NA	NA	NA	NA
WP_003815889.1\|275903_276533_-	LemA family protein	NA	NA	NA	NA
WP_010929660.1\|276815_278246_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-44	29.8
WP_010929661.1\|278279_278909_+	LysE family transporter	NA	NA	NA	NA
WP_003815895.1\|278957_280565_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
WP_010929663.1\|280589_281273_+	hypothetical protein	NA	NA	NA	NA
WP_003815898.1\|281354_281831_-	bacterioferritin	NA	NA	NA	NA
WP_005012067.1\|282037_282988_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929664.1\|284103_284631_+	META domain-containing protein	NA	NA	NA	NA
WP_010929665.1\|284722_285538_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA
WP_003808370.1\|285598_286333_+	sulfurtransferase	NA	NA	NA	NA
WP_010929666.1\|286370_288449_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
WP_003808374.1\|288698_288971_-	hypothetical protein	NA	NA	NA	NA
WP_033446322.1\|289072_290158_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_010929668.1\|290161_292066_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA
WP_014486044.1\|292062_295737_+	DUF490 domain-containing protein	NA	NA	NA	NA
WP_010929670.1\|295797_296361_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
WP_003808385.1\|296368_296791_-	glyoxalase	NA	NA	NA	NA
WP_010929671.1\|296818_297238_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_077274090.1\|297266_297713_-	GNAT family N-acetyltransferase	Q9AZG4	Lactococcus_phage	1.2e-08	29.4
WP_003808391.1\|297839_298337_+	hypothetical protein	NA	NA	NA	NA
WP_003808393.1\|298491_300762_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA
WP_019249381.1\|300837_302043_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_005012067.1\|302141_303092_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929673.1\|303194_303830_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.8e-83	73.8
WP_010929674.1\|303826_304720_+	ZIP family metal transporter	NA	NA	NA	NA
WP_010929675.1\|305114_306215_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA
WP_010929676.1\|306296_306671_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_010929677.1\|306730_309595_+	aminomethyl-transferring glycine dehydrogenase	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
WP_010929678.1\|309739_310480_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_010929679.1\|310549_311761_+	CoA transferase	NA	NA	NA	NA
WP_010929680.1\|311789_312758_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_005012067.1\|313371_314322_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003818201.1\|314870_315245_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_010929807.1\|315319_316378_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_005012067.1\|316401_317352_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929833.1\|318908_319754_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_010929834.1\|319841_321005_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_010929835.1\|321423_322395_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010929836.1\|322433_323861_-	amidase	NA	NA	NA	NA
WP_023853625.1\|323980_324772_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010929838.1\|324890_327344_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	2.3e-112	34.8
WP_010929839.1\|327438_328548_-	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.2e-41	32.6
WP_010929554.1\|328550_329960_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_003816025.1\|330365_330500_+	50S ribosomal protein L34	NA	NA	NA	NA
WP_003816026.1\|330595_330967_+	ribonuclease P protein component	NA	NA	NA	NA
WP_003816027.1\|330963_331236_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.0e-15	52.2
WP_010927254.1\|331284_332976_+	membrane protein insertase YidC	NA	NA	NA	NA
WP_005012067.1\|333206_334157_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

339643 : 345992

Acinetobacter_phage(16.67%)

integrase

attL 337582:337599|attR 350848:350865

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
337582:337599	attL	NA	NA	NA	NA
WP_010929843.1\|339643_340633_+\|integrase	site-specific integrase	A0A1B1P9F9	Acinetobacter_phage	4.4e-75	44.4
WP_010926403.1\|340629_340830_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010929845.1\|340942_341284_-	hypothetical protein	A0A0H5ARN8	Pseudomonas_phage	1.0e-10	45.3
WP_019247983.1\|341294_342479_-	hypothetical protein	A0A291L9X3	Bordetella_phage	1.5e-24	37.8
WP_010929847.1\|342515_343043_-	hypothetical protein	NA	NA	NA	NA
WP_010929848.1\|343100_343748_-	YqaJ viral recombinase family protein	A0A0U2BXF3	Paracoccus_phage	2.0e-31	41.4
WP_050833446.1\|343744_344731_-	DNA recombinase	A9DEN8	Yersinia_phage	3.4e-67	61.1
WP_010926410.1\|344734_344917_-	hypothetical protein	NA	NA	NA	NA
WP_010926411.1\|344913_345291_-	hypothetical protein	NA	NA	NA	NA
WP_010929850.1\|345524_345992_-	hypothetical protein	Q3HQX1	Burkholderia_phage	2.1e-43	71.3
350848:350865	attR	NA	NA	NA	NA

DBSCAN-SWA_5

415176 : 469743

Orpheovirus(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|415176_416127_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010927231.1\|416263_417181_+	reductase	NA	NA	NA	NA
WP_003815842.1\|417177_417426_+	glutaredoxin family protein	NA	NA	NA	NA
WP_019248029.1\|417422_418628_+	CoA transferase	NA	NA	NA	NA
WP_014486045.1\|418700_419696_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_014906039.1\|419718_420939_-	CoA transferase	NA	NA	NA	NA
WP_014486047.1\|420935_421580_-	hypothetical protein	NA	NA	NA	NA
WP_010929483.1\|423310_424120_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_014486048.1\|424424_425378_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	5.6e-59	42.5
WP_014486049.1\|425476_426460_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_014486050.1\|426386_427088_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_014486051.1\|427136_427907_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_019247259.1\|427903_429082_-	CoA transferase	NA	NA	NA	NA
WP_014486052.1\|429249_430956_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA
WP_019248098.1\|430952_431849_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014486054.1\|431889_433479_-	sulfurtransferase	NA	NA	NA	NA
WP_003807867.1\|433528_434521_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003807865.1\|434589_435189_-	hypothetical protein	NA	NA	NA	NA
WP_014486055.1\|435649_436630_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010929577.1\|436705_437656_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_047122777.1\|437744_438659_+	DMT family transporter	NA	NA	NA	NA
WP_010929782.1\|438655_439315_+	LysE family translocator	NA	NA	NA	NA
WP_003814709.1\|439404_440328_+	alpha/beta fold hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	4.8e-07	27.2
WP_010929783.1\|440333_440789_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA
WP_023853020.1\|440785_441787_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA
WP_042962164.1\|441721_442117_+	GtrA family protein	NA	NA	NA	NA
WP_010927086.1\|442076_443696_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_003814720.1\|443692_444751_-	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	2.8e-59	40.5
WP_033446199.1\|444880_445375_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_022997984.1\|445467_446445_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929785.1\|446640_447846_+	sodium/glutamate symporter	NA	NA	NA	NA
WP_010929786.1\|447842_449354_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_003814726.1\|449369_450683_-	short-chain fatty acid transporter	NA	NA	NA	NA
WP_003814728.1\|450873_451053_-	hypothetical protein	NA	NA	NA	NA
WP_003814730.1\|451462_452197_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.4e-41	43.8
WP_010929577.1\|454641_455592_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247421.1\|455723_456122_-	GTP-binding protein	E4ZFJ7	Streptococcus_phage	9.0e-19	44.3
WP_003814701.1\|456532_457003_-	universal stress protein	NA	NA	NA	NA
WP_003820700.1\|457091_457436_-	TIGR01244 family phosphatase	NA	NA	NA	NA
WP_010929788.1\|457535_458936_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_010929789.1\|460724_461243_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	2.1e-12	38.9
WP_003814694.1\|461353_462109_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	2.9e-42	40.8
WP_003814691.1\|462304_463537_+	CoA transferase	NA	NA	NA	NA
WP_010929791.1\|463529_464315_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_003814685.1\|464381_465353_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003814681.1\|465363_466341_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019247419.1\|466466_467639_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_010929793.1\|467665_468694_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_005013747.1\|468792_469743_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

542647 : 651991

Acinetobacter_phage(27.27%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012808.1\|542647_543598_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929985.1\|543699_544128_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010929984.1\|544200_546396_+	DUF1156 domain-containing protein	NA	NA	NA	NA
WP_005012067.1\|546617_547568_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023852739.1\|547527_548052_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003814467.1\|548183_549155_+	FecR family protein	NA	NA	NA	NA
WP_010929983.1\|549274_551719_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_010929982.1\|551734_552325_-	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_005012067.1\|552568_553519_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814462.1\|553676_554942_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA
WP_003814461.1\|554975_556073_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA
WP_005013747.1\|556727_557678_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814459.1\|557678_558248_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010929980.1\|558315_559131_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_010929978.1\|560995_561937_+	ABC transporter permease	NA	NA	NA	NA
WP_010929977.1\|561936_562821_+	ABC transporter permease	NA	NA	NA	NA
WP_010927038.1\|562824_564477_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-16	30.8
WP_010929976.1\|564516_565914_+	amidase family protein	NA	NA	NA	NA
WP_010929975.1\|565955_567335_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_003814443.1\|567374_567593_-	DUF1059 domain-containing protein	NA	NA	NA	NA
WP_003814441.1\|567933_568806_+	oxaloacetate decarboxylase	NA	NA	NA	NA
WP_010929577.1\|568965_569916_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814437.1\|570647_571025_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_003814436.1\|571009_571711_-	membrane protein	NA	NA	NA	NA
WP_010931409.1\|571854_572547_-	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_023852735.1\|572546_573587_-	phosphotransferase	NA	NA	NA	NA
WP_033446130.1\|573765_576132_+	LPS-assembly protein LptD	NA	NA	NA	NA
WP_010931412.1\|576128_577688_+	chaperone SurA	NA	NA	NA	NA
WP_010931413.1\|577712_578510_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_010931414.1\|578541_579687_-	glycerate kinase	W6LM47	Streptococcus_phage	1.7e-41	42.2
WP_003814419.1\|579791_581234_+	pyruvate kinase	NA	NA	NA	NA
WP_010929184.1\|581236_582466_-	spore maturation protein	NA	NA	NA	NA
WP_005012808.1\|584603_585554_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010927663.1\|585645_586596_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010931400.1\|586936_587887_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010931399.1\|590210_591359_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_010931398.1\|591403_592027_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010931397.1\|592179_593172_+	nitronate monooxygenase	NA	NA	NA	NA
WP_003815313.1\|593168_593906_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_003815315.1\|593985_594807_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010931396.1\|594895_595759_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_003815317.1\|595885_596122_+	hypothetical protein	NA	NA	NA	NA
WP_033454484.1\|598171_599140_+	succinylglutamate desuccinylase	NA	NA	NA	NA
WP_003817805.1\|599198_600176_+	ABC transporter permease	NA	NA	NA	NA
WP_010931394.1\|600183_601104_+	ABC transporter permease	NA	NA	NA	NA
WP_023852622.1\|601100_602801_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-15	32.7
WP_010931393.1\|602803_603709_+	hydrolase	NA	NA	NA	NA
WP_010931392.1\|603752_604886_+	M20 family metallopeptidase	NA	NA	NA	NA
WP_005012067.1\|605015_605966_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931391.1\|606064_608134_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	2.6e-101	37.3
WP_019247688.1\|608176_610279_-	primosomal protein N'	NA	NA	NA	NA
WP_010931389.1\|610585_611662_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA
WP_010931388.1\|611737_612622_-	hypothetical protein	NA	NA	NA	NA
WP_003815341.1\|612804_613227_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_010931387.1\|613236_614637_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_003817813.1\|614679_615585_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_010931386.1\|615683_617225_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_003815348.1\|617259_617799_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_010931385.1\|617811_618282_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_003815363.1\|618419_618662_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_003815364.1\|618778_619660_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_003815365.1\|619732_620053_-	ABC transporter permease	NA	NA	NA	NA
WP_005012808.1\|620904_621855_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003815367.1\|623178_623955_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_010931383.1\|623989_625762_+	M61 family metallopeptidase	NA	NA	NA	NA
WP_010931382.1\|625763_626666_-	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
WP_003817821.1\|626790_627150_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_010931381.1\|627181_628144_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
WP_005012067.1\|628242_629193_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931380.1\|629205_630141_-	D-2-hydroxyacid dehydrogenase family protein	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
WP_010931379.1\|630200_631040_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA
WP_010931378.1\|631036_632206_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA
WP_003815379.1\|632202_633492_-	murein transglycosylase A	NA	NA	NA	NA
WP_003815381.1\|633534_633909_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_023852620.1\|634023_634752_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_010931377.1\|634759_635464_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_019248071.1\|635727_637248_+	anthranilate synthase component I	S4VNU7	Pandoravirus	3.1e-43	32.0
WP_003815390.1\|637303_637867_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
WP_003817833.1\|637885_638917_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
WP_010931375.1\|638913_639702_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
WP_019247413.1\|639722_639881_-	hypothetical protein	NA	NA	NA	NA
WP_014905441.1\|639877_640867_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012067.1\|642623_643574_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931374.1\|644796_645699_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003814312.1\|645700_646555_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_010931373.1\|646601_647711_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_010931372.1\|647721_648240_-	flavin reductase family protein	NA	NA	NA	NA
WP_003814302.1\|648269_648902_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_003814300.1\|648973_649633_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_023852703.1\|649629_650769_-	MFS transporter	NA	NA	NA	NA
WP_019247745.1\|651118_651991_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA

DBSCAN-SWA_7

656405 : 720238

Pandoravirus(12.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930525.1\|656405_657422_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003814287.1\|657693_658320_-	hypothetical protein	NA	NA	NA	NA
WP_010931367.1\|658375_659503_-	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	3.8e-38	37.8
WP_003814283.1\|659508_665226_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
WP_003814277.1\|665793_666738_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
WP_003814275.1\|666926_667862_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_010931365.1\|667979_669551_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019247692.1\|669630_670839_+	ABC transporter permease	NA	NA	NA	NA
WP_010931364.1\|671387_672254_+	DMT family transporter	NA	NA	NA	NA
WP_003814254.1\|674614_674836_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_010930158.1\|675166_676183_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003814252.1\|676267_676519_-	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_003814250.1\|676522_677338_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_010931362.1\|677450_678329_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_003820957.1\|678440_680204_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	5.0e-162	50.0
WP_010931361.1\|680319_681660_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_010927010.1\|682729_684154_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_003814239.1\|684153_684855_-	response regulator	W8CYM9	Bacillus_phage	5.6e-32	36.6
WP_014905422.1\|686359_687310_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023994844.1\|687405_688377_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010931357.1\|688381_689062_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_003814742.1\|689199_689592_+	OsmC family protein	NA	NA	NA	NA
WP_010929632.1\|689699_690716_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003814739.1\|690955_691741_-	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_010931356.1\|691835_693245_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_010927090.1\|693255_694056_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_010931355.1\|694076_694847_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_010931354.1\|694889_695357_+	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
WP_005013747.1\|695353_696304_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003818344.1\|698252_699131_-	fatty acid desaturase	NA	NA	NA	NA
WP_019247959.1\|700057_703036_-	hypothetical protein	NA	NA	NA	NA
WP_005013747.1\|703389_704340_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931353.1\|704336_705425_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_010931352.1\|705460_706324_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
WP_010931351.1\|707463_707853_-	hypothetical protein	NA	NA	NA	NA
WP_014486103.1\|707856_708639_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_047122778.1\|708672_709458_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_010931349.1\|709733_710873_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931348.1\|710869_711661_+	ATP-binding cassette domain-containing protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
WP_010931347.1\|711657_712407_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
WP_010931346.1\|712403_713276_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_004566224.1\|713275_714277_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_019248372.1\|714273_715437_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_003808193.1\|715462_716146_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_019248373.1\|716099_717434_+	AMP-binding protein	NA	NA	NA	NA
WP_010931344.1\|717426_718521_+	CoA transferase	NA	NA	NA	NA
WP_010929591.1\|719287_720238_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

739149 : 808330

Bacillus_phage(20.0%)

protease,tRNA,transposase,integrase

attL 744881:744940|attR 816458:817507

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005013747.1\|739149_740100_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931335.1\|740198_741674_-	M81 family metallopeptidase	NA	NA	NA	NA
WP_010931334.1\|743261_744149_-	ABC transporter permease	NA	NA	NA	NA
744881:744940	attL	NA	NA	NA	NA
WP_005012808.1\|744978_745929_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931332.1\|746187_747753_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931331.1\|749530_750856_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_010931330.1\|751038_752496_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	7.6e-15	21.1
WP_003816386.1\|752459_752957_-	dihydrofolate reductase	A0A140HLG8	Bacillus_phage	3.0e-24	38.9
WP_010931328.1\|752987_753959_-	thymidylate synthase	J7KKN7	Erwinia_phage	4.8e-50	33.3
WP_023994724.1\|754011_754443_-	OsmC family protein	NA	NA	NA	NA
WP_010931327.1\|754572_755241_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_003808448.1\|755969_757073_+	glycosyl transferase	NA	NA	NA	NA
WP_010931326.1\|757178_758453_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA
WP_010930472.1\|758464_759490_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	A0A2K9L4U8	Tupanvirus	4.7e-72	44.2
WP_010931325.1\|759491_760862_+	membrane protein	NA	NA	NA	NA
WP_010931324.1\|760862_761999_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_010931323.1\|762045_763971_+	asparagine synthase (glutamine-hydrolyzing)	A0A2K9R7N5	Dishui_lake_phycodnavirus	1.0e-27	29.0
WP_010931322.1\|763967_765089_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_010931321.1\|765085_766240_+	glycosyltransferase	NA	NA	NA	NA
WP_010931320.1\|766236_767367_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_003808462.1\|767374_768940_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_010931319.1\|768946_770329_-	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	6.2e-51	31.6
WP_003808465.1\|770607_771219_+	hypothetical protein	NA	NA	NA	NA
WP_010931317.1\|771310_772726_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_003818936.1\|772743_773454_+	response regulator transcription factor	NA	NA	NA	NA
WP_010931316.1\|773450_774773_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_023853096.1\|774918_776814_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_003818932.1\|776939_778253_-	fumarylacetoacetase	NA	NA	NA	NA
WP_003818930.1\|778361_779660_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA
WP_010931314.1\|779842_780751_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003808487.1\|780760_780970_-	DUF2783 domain-containing protein	NA	NA	NA	NA
WP_003808489.1\|780981_782661_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_010931313.1\|782762_783716_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_010925978.1\|783806_784634_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA
WP_010931312.1\|784632_786519_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003818921.1\|786515_787115_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_010931311.1\|787163_788063_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_010931310.1\|788271_789222_+	ribose-phosphate pyrophosphokinase	A0A2K9L8D8	Tupanvirus	7.3e-43	35.5
WP_029443719.1\|789344_789959_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_010931308.1\|790087_790684_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_010931307.1\|790680_791463_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_010931306.1\|791535_792627_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_010931305.1\|792906_794034_+\|integrase	site-specific integrase	A0A1B0VMI6	Pseudomonas_phage	1.4e-48	33.6
WP_010931304.1\|794375_795422_+	Fic family protein	NA	NA	NA	NA
WP_019247951.1\|795932_798689_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_010931302.1\|798690_801642_+	restriction endonuclease subunit M	G8I4P9	Mycobacterium_phage	2.9e-21	25.1
WP_010931301.1\|801657_802869_+	AAA family ATPase	NA	NA	NA	NA
WP_076879586.1\|802865_803066_+	hypothetical protein	NA	NA	NA	NA
WP_005013747.1\|803052_804003_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_077274087.1\|804019_804514_+	DUF4276 family protein	NA	NA	NA	NA
WP_019247740.1\|804517_804775_+	hypothetical protein	NA	NA	NA	NA
WP_019248155.1\|805318_806230_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_029443992.1\|806311_806596_+	ATP-dependent helicase	A0A1V0SIN4	Klosneuvirus	6.8e-05	34.1
WP_010929577.1\|807379_808330_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
816458:817507	attR	NA	NA	NA	NA

DBSCAN-SWA_9

924244 : 981081

Pseudomonas_phage(37.5%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|924244_925195_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012067.1\|925293_926244_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931247.1\|926342_927206_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_010931246.1\|927202_928102_-	TonB family protein	NA	NA	NA	NA
WP_019248069.1\|928139_930023_-	RNB domain-containing ribonuclease	NA	NA	NA	NA
WP_010931244.1\|930094_930688_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_003814955.1\|930698_932069_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
WP_023853327.1\|932151_932700_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_003814953.1\|932778_933213_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_003814952.1\|933302_933752_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_003814951.1\|933761_935108_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_010931242.1\|936073_937171_+	DUF3426 domain-containing protein	NA	NA	NA	NA
WP_010931241.1\|937182_938124_+	carbohydrate kinase family protein	NA	NA	NA	NA
WP_010931240.1\|938296_938800_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_003814943.1\|939080_939320_+	acyl carrier protein	NA	NA	NA	NA
WP_080478561.1\|939297_940707_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_010931239.1\|940836_941964_+	membrane-bound O-acyltransferase	A0A125RNP0	Pseudomonas_phage	3.7e-25	30.8
WP_023853325.1\|941983_943438_+	D-alanine--poly(phosphoribitol) ligase	A0A2K9L3I8	Tupanvirus	7.3e-26	25.1
WP_023853329.1\|943445_944006_-	YggT family protein	NA	NA	NA	NA
WP_010931236.1\|944159_944687_-	histone H1-like DNA-binding protein	NA	NA	NA	NA
WP_003814929.1\|945004_946201_-	ribonucleotide-diphosphate reductase subunit beta	A0A2H4P762	Pseudomonas_phage	1.0e-33	28.9
WP_010931235.1\|946222_949150_-	ribonucleoside-diphosphate reductase subunit alpha	A0A2H4P767	Pseudomonas_phage	3.4e-171	43.9
WP_019247415.1\|949455_952518_-	indolepyruvate ferredoxin oxidoreductase family protein	NA	NA	NA	NA
WP_003814925.1\|953079_953532_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_023998238.1\|953733_954243_+	lipoprotein	NA	NA	NA	NA
WP_010931233.1\|954311_955499_+	MFS transporter	NA	NA	NA	NA
WP_033446281.1\|955502_956909_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_010931231.1\|957044_959504_+	bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_005012067.1\|959500_960451_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012067.1\|960549_961500_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931230.1\|961598_962273_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010931229.1\|962569_964066_+	membrane protein	NA	NA	NA	NA
WP_003820592.1\|964182_965571_+	ATP-dependent RNA helicase DbpA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	4.6e-54	33.5
WP_003820593.1\|965676_966066_+	VOC family protein	NA	NA	NA	NA
WP_019248167.1\|966077_966770_-	cysteine hydrolase	NA	NA	NA	NA
WP_010931228.1\|966784_967621_-	ABC transporter permease	NA	NA	NA	NA
WP_010931227.1\|967623_968433_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.6e-33	37.9
WP_010931226.1\|969689_970364_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_023853313.1\|970377_970929_-	ribosome-associated protein	NA	NA	NA	NA
WP_004567741.1\|970987_972352_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_004567739.1\|972693_973791_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_010927106.1\|974086_974515_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_010931224.1\|974524_974917_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_003820599.1\|975105_976170_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_010931223.1\|976206_976953_+	membrane protein	NA	NA	NA	NA
WP_003814883.1\|977040_977412_+	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	4.7e-30	56.9
WP_010931222.1\|977481_978618_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_010931221.1\|978623_980039_-	M23 family metallopeptidase	A8ATH6	Listeria_phage	1.9e-18	46.9
WP_005012067.1\|980130_981081_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1055375 : 1186769

120

Bacillus_virus(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003813026.1\|1055375_1056491_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_003813022.1\|1056591_1057410_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_010931185.1\|1057507_1058119_-	glutathione S-transferase	NA	NA	NA	NA
WP_010931184.1\|1058278_1059655_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	2.2e-109	47.5
WP_003813017.1\|1059717_1060176_+	cytochrome c	NA	NA	NA	NA
WP_003813013.1\|1060260_1060956_-	cytochrome b561	NA	NA	NA	NA
WP_003813010.1\|1061017_1061299_-	hypothetical protein	NA	NA	NA	NA
WP_010931182.1\|1061861_1062614_+	DUF3053 domain-containing protein	NA	NA	NA	NA
WP_003813006.1\|1062658_1063735_+	AI-2E family transporter	NA	NA	NA	NA
WP_005012067.1\|1063731_1064682_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_014486100.1\|1064784_1065447_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_019249309.1\|1065541_1065712_+	hypothetical protein	NA	NA	NA	NA
WP_003818702.1\|1067068_1068265_+	CoA transferase	NA	NA	NA	NA
WP_014486098.1\|1068285_1069089_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_019247598.1\|1069169_1069466_+	hypothetical protein	NA	NA	NA	NA
WP_019247597.1\|1069496_1070060_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014486097.1\|1070100_1070958_+	ABC transporter permease	NA	NA	NA	NA
WP_003818698.1\|1070965_1071715_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.2e-29	33.5
WP_014486096.1\|1071736_1072609_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_014486095.1\|1072637_1073417_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_014486094.1\|1073450_1074248_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003808978.1\|1076902_1077295_+	hypothetical protein	NA	NA	NA	NA
WP_014486091.1\|1077288_1078149_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_003818691.1\|1078152_1079115_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_014486089.1\|1079891_1080581_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.8e-12	28.8
WP_010930208.1\|1081441_1082392_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931181.1\|1082504_1083374_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010926062.1\|1083444_1084140_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_010931179.1\|1084129_1084639_+	nucleoside deaminase	NA	NA	NA	NA
WP_010931178.1\|1084635_1085856_+	MFS transporter	NA	NA	NA	NA
WP_010931177.1\|1085803_1086706_-	transcriptional regulator GcvA	NA	NA	NA	NA
WP_023997744.1\|1087592_1088879_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010931176.1\|1088917_1090291_+	amidase	NA	NA	NA	NA
WP_010931175.1\|1090329_1091031_-	riboflavin synthase	NA	NA	NA	NA
WP_010931174.1\|1091329_1092319_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003809010.1\|1092419_1092881_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_010931173.1\|1092896_1093445_-	hypothetical protein	NA	NA	NA	NA
WP_010931172.1\|1093586_1095062_-	acyl--CoA ligase	Q75ZG1	Hepacivirus	3.0e-35	25.6
WP_010931171.1\|1095167_1096259_+	DUF2817 domain-containing protein	NA	NA	NA	NA
WP_010931170.1\|1096262_1097045_-	ABC transporter permease	NA	NA	NA	NA
WP_019248105.1\|1097054_1097843_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.7e-34	40.0
WP_010931168.1\|1098968_1099403_-	PaaI family thioesterase	NA	NA	NA	NA
WP_010931167.1\|1099399_1100410_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_003809025.1\|1100453_1101380_-	VOC family protein	NA	NA	NA	NA
WP_003809026.1\|1101665_1102034_+	DUF861 domain-containing protein	NA	NA	NA	NA
WP_005013747.1\|1102250_1103201_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931165.1\|1103245_1105672_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.2e-86	33.8
WP_010931164.1\|1105720_1106413_+	HD domain-containing protein	A0A1D6Y7U0	Golden_Marseillevirus	4.7e-07	29.9
WP_010931163.1\|1106485_1107685_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_003819549.1\|1107702_1108608_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010931162.1\|1108723_1109653_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_010931161.1\|1109678_1111025_+	MFS transporter	NA	NA	NA	NA
WP_019247888.1\|1111037_1111802_+	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	3.1e-12	26.5
WP_010931159.1\|1111815_1112598_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_005012067.1\|1112790_1113741_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931158.1\|1113802_1114912_-	porin	NA	NA	NA	NA
WP_003815281.1\|1115424_1116261_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
WP_010931157.1\|1116387_1117296_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005012067.1\|1117292_1118243_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247492.1\|1118628_1119171_+	hypothetical protein	NA	NA	NA	NA
WP_010930176.1\|1120206_1121157_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247402.1\|1121398_1121767_+	hypothetical protein	NA	NA	NA	NA
WP_019248356.1\|1121812_1122937_+	hypothetical protein	NA	NA	NA	NA
WP_003820818.1\|1124071_1124812_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010931155.1\|1124915_1125536_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010931154.1\|1125537_1127646_-	AsmA family protein	NA	NA	NA	NA
WP_023996698.1\|1127790_1128402_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_003820813.1\|1128481_1128946_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
WP_019248355.1\|1129221_1129407_+	hypothetical protein	NA	NA	NA	NA
WP_010931153.1\|1129458_1130211_-	DNA-binding protein	NA	NA	NA	NA
WP_010931152.1\|1130217_1131480_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_023852748.1\|1131521_1132760_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_003820806.1\|1133837_1134965_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
WP_003814524.1\|1134975_1135803_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_010931150.1\|1135789_1136656_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_010931149.1\|1138022_1138427_-	hypothetical protein	NA	NA	NA	NA
WP_033446288.1\|1138789_1139701_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003820799.1\|1139715_1140426_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_010931147.1\|1140422_1141667_+	DUF521 domain-containing protein	NA	NA	NA	NA
WP_003820797.1\|1141668_1142103_+	DUF126 domain-containing protein	NA	NA	NA	NA
WP_003814535.1\|1142131_1142437_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_005012067.1\|1142535_1143486_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_029443926.1\|1143542_1144691_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_010930176.1\|1144771_1145722_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931144.1\|1146253_1147051_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019248416.1\|1147098_1147752_-	ABC transporter permease	NA	NA	NA	NA
WP_003814544.1\|1147708_1148797_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	8.7e-32	36.4
WP_003814547.1\|1148961_1151187_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA
WP_023852715.1\|1153464_1154361_+	inositol monophosphatase	NA	NA	NA	NA
WP_005012067.1\|1154481_1155432_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931141.1\|1155428_1157120_-	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	9.4e-33	28.1
WP_010931140.1\|1157181_1158378_+	amidohydrolase	NA	NA	NA	NA
WP_003814552.1\|1158391_1159270_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010929220.1\|1159376_1160423_+	YeiH family putative sulfate export transporter	NA	NA	NA	NA
WP_003814554.1\|1160486_1160897_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003814555.1\|1160907_1162380_+	magnesium transporter	NA	NA	NA	NA
WP_010931139.1\|1163522_1164674_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_003813114.1\|1164821_1165832_-	acyltransferase family protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	3.6e-16	24.6
WP_010931138.1\|1166002_1166968_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_033446289.1\|1167142_1167973_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_003813109.1\|1168059_1168326_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_003820295.1\|1168330_1169242_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_010931136.1\|1169291_1171154_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_003813103.1\|1171310_1172108_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_010926331.1\|1172327_1172708_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_003813095.1\|1172755_1173079_+	primosomal replication protein N	NA	NA	NA	NA
WP_003813094.1\|1173171_1173444_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_010931135.1\|1173459_1173915_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_019248136.1\|1174031_1174868_+	hypothetical protein	NA	NA	NA	NA
WP_003813089.1\|1174864_1176238_+	replicative DNA helicase	C7BGG1	Burkholderia_phage	4.0e-135	58.2
WP_019248137.1\|1176258_1177227_-	bile acid:sodium symporter	NA	NA	NA	NA
WP_003813085.1\|1177306_1178284_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003813082.1\|1178388_1180068_-	PhoH family protein	A0A2I7SAD7	Vibrio_phage	1.5e-70	36.9
WP_003813079.1\|1180147_1180612_-	peroxiredoxin	NA	NA	NA	NA
WP_003813077.1\|1180614_1181067_-	Xcc1710-like domain-containing protein	NA	NA	NA	NA
WP_010931132.1\|1181283_1182471_+	alanine transaminase	NA	NA	NA	NA
WP_003813074.1\|1182467_1183772_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_010931131.1\|1183768_1185175_+	threonine synthase	NA	NA	NA	NA
WP_003813070.1\|1185388_1185610_+	YgdI/YgdR family lipoprotein	NA	NA	NA	NA
WP_005012808.1\|1185818_1186769_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

1190321 : 1252629

uncultured_Mediterranean_phage(28.57%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|1190321_1191272_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023853341.1\|1191871_1192639_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
WP_003812908.1\|1192756_1193020_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_010931128.1\|1193120_1194125_-	DUF4880 domain-containing protein	NA	NA	NA	NA
WP_010931127.1\|1194325_1195927_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_010931126.1\|1195952_1196711_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_010931125.1\|1196802_1197459_-	adenylate kinase	NA	NA	NA	NA
WP_010931124.1\|1197549_1198314_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_003812895.1\|1198323_1198512_-	Trm112 family protein	NA	NA	NA	NA
WP_010931123.1\|1198567_1199611_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_010931122.1\|1199607_1200021_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_003812889.1\|1200017_1200638_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_005012067.1\|1200918_1201869_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931120.1\|1202036_1203428_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
WP_010931119.1\|1203500_1204079_+	superoxide dismutase [Fe]	NA	NA	NA	NA
WP_019247560.1\|1204195_1205593_+	chloride channel protein	NA	NA	NA	NA
WP_010931117.1\|1205708_1206914_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_003820399.1\|1207013_1207532_-	hypothetical protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.1e-14	42.2
WP_003812875.1\|1207626_1207872_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
WP_003820400.1\|1208099_1208414_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
WP_023853340.1\|1208512_1213693_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA
WP_050833419.1\|1213689_1215858_+	penicillin-binding protein 1C	NA	NA	NA	NA
WP_010931114.1\|1215913_1218229_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.1e-164	41.9
WP_003820402.1\|1218233_1219553_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA
WP_014905522.1\|1219571_1221245_+	MCE family protein	NA	NA	NA	NA
WP_010931111.1\|1221249_1221918_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_010931110.1\|1222074_1225896_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_005015810.1\|1226226_1227177_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003812857.1\|1227198_1228344_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003820410.1\|1228492_1229422_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_003812851.1\|1229418_1230507_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_010931109.1\|1230503_1231307_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
WP_003812846.1\|1231303_1232035_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
WP_010931108.1\|1232092_1233382_-	MFS transporter	NA	NA	NA	NA
WP_010931107.1\|1233478_1234081_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003812839.1\|1238634_1238973_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_010931105.1\|1239680_1239947_+	accessory factor UbiK family protein	NA	NA	NA	NA
WP_005012067.1\|1241653_1242604_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931103.1\|1242600_1243932_-	MFS transporter	NA	NA	NA	NA
WP_010931102.1\|1245192_1247193_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_003819722.1\|1247185_1247827_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
WP_003809276.1\|1247823_1248231_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
WP_010931101.1\|1248227_1249028_+	SURF1 family protein	NA	NA	NA	NA
WP_010931100.1\|1249102_1249807_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010931099.1\|1249838_1250633_+	N-formylglutamate deformylase	NA	NA	NA	NA
WP_010929956.1\|1250629_1251580_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_005012808.1\|1251678_1252629_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1353707 : 1419157

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076879576.1\|1353707_1354658_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010930048.1\|1354756_1355707_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003811244.1\|1355805_1356417_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_010930290.1\|1356651_1357779_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930289.1\|1357889_1358978_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.2e-19	31.2
WP_003811259.1\|1359030_1359882_-	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA
WP_003811262.1\|1359901_1360783_-	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA
WP_010930288.1\|1360959_1362273_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA
WP_003811267.1\|1362483_1363317_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_010930287.1\|1363313_1363895_+	queuosine precursor transporter	A0A2I7SAW6	Vibrio_phage	9.4e-17	37.3
WP_005015810.1\|1364248_1365199_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930286.1\|1365214_1366330_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003811272.1\|1366432_1367359_+	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA
WP_010930285.1\|1367358_1368597_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_003811277.1\|1368593_1369361_+	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	A0A2H4PQG7	Staphylococcus_phage	1.2e-14	26.4
WP_003811279.1\|1369361_1370063_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.8e-18	30.4
WP_019247793.1\|1370144_1370591_-	glutamate racemase	NA	NA	NA	NA
WP_010930283.1\|1371480_1372119_+	glutathione S-transferase	NA	NA	NA	NA
WP_005012808.1\|1372887_1373838_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003811293.1\|1374059_1374437_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_003811295.1\|1374584_1375082_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_010930291.1\|1375078_1375606_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_003811298.1\|1375739_1376555_+	exported protein	NA	NA	NA	NA
WP_010930292.1\|1376567_1377749_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003811301.1\|1377796_1378690_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_010930293.1\|1378816_1379287_-	hypothetical protein	NA	NA	NA	NA
WP_010930294.1\|1379412_1380240_-	DUF3298 domain-containing protein	NA	NA	NA	NA
WP_010930295.1\|1381331_1381796_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_010930296.1\|1381807_1382509_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA
WP_003811310.1\|1382618_1383119_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	4.7e-25	38.4
WP_010930297.1\|1383201_1384380_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_003811313.1\|1386007_1386343_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_010930298.1\|1386530_1387979_+	CoA transferase	NA	NA	NA	NA
WP_023852799.1\|1388036_1388381_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.0e-31	58.4
WP_003811316.1\|1388487_1389027_-	peroxiredoxin	NA	NA	NA	NA
WP_010929577.1\|1389119_1390070_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023852768.1\|1390168_1390576_-	hypothetical protein	NA	NA	NA	NA
WP_019247530.1\|1390808_1391240_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA
WP_010930300.1\|1391421_1391826_-	DoxX family protein	NA	NA	NA	NA
WP_010930301.1\|1393062_1393386_+	hypothetical protein	NA	NA	NA	NA
WP_010926674.1\|1393388_1394276_-	aldo/keto reductase	NA	NA	NA	NA
WP_003811322.1\|1394308_1394734_-	universal stress protein	NA	NA	NA	NA
WP_019247534.1\|1394805_1395159_-	hypothetical protein	NA	NA	NA	NA
WP_003811324.1\|1395398_1395905_-	hypothetical protein	NA	NA	NA	NA
WP_050833447.1\|1395943_1397275_-	transcriptional regulator PtsJ	NA	NA	NA	NA
WP_003811326.1\|1397334_1398150_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_010930303.1\|1398146_1399001_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA
WP_019248253.1\|1402063_1404628_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA
WP_010930305.1\|1405994_1407749_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA
WP_010930306.1\|1407745_1409866_-	glycogen debranching protein GlgX	NA	NA	NA	NA
WP_010930307.1\|1409870_1412066_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
WP_010930308.1\|1412062_1415404_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA
WP_010930208.1\|1418206_1419157_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1758674 : 1824364

Salmonella_phage(15.38%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023853254.1\|1758674_1760618_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_004566380.1\|1760614_1761535_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930928.1\|1761554_1762142_-	DNA repair protein RecO	NA	NA	NA	NA
WP_003813784.1\|1762134_1763025_-	GTPase Era	NA	NA	NA	NA
WP_023853248.1\|1763021_1763783_-	ribonuclease III	M4QNJ2	Ostreococcus_lucimarinus_virus	3.1e-20	33.0
WP_010930929.1\|1763788_1764673_-	signal peptidase I	NA	NA	NA	NA
WP_010930930.1\|1764695_1766489_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	8.4e-24	23.5
WP_004566381.1\|1766619_1768107_-\|protease	DegQ family serine endoprotease	W5SAB9	Pithovirus	1.2e-07	31.5
WP_010930931.1\|1768144_1769203_-	siderophore-interacting protein	NA	NA	NA	NA
WP_023853242.1\|1769202_1769703_-	sigma-E factor negative regulatory protein	NA	NA	NA	NA
WP_003813797.1\|1769715_1770315_-	RNA polymerase sigma factor RpoE	A0A0F6TH34	Sinorhizobium_phage	2.2e-05	26.1
WP_010930933.1\|1770311_1770812_-	membrane protein	NA	NA	NA	NA
WP_003813802.1\|1770813_1772043_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_003813816.1\|1772232_1772472_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	5.4e-11	46.6
WP_003813819.1\|1772654_1773407_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	6.9e-12	31.3
WP_010930934.1\|1773408_1774344_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_010930935.1\|1774425_1775412_-	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_003821347.1\|1775411_1776470_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_003813827.1\|1776526_1776709_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_010930936.1\|1776760_1777354_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_003821345.1\|1777462_1778062_+	septum formation protein Maf	NA	NA	NA	NA
WP_010930937.1\|1778058_1778769_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_010930938.1\|1778770_1779598_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_003814009.1\|1781404_1782646_-	MFS transporter	NA	NA	NA	NA
WP_003814010.1\|1782657_1783431_-	peroxide stress protein YaaA	NA	NA	NA	NA
WP_005012067.1\|1783457_1784408_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814011.1\|1784506_1785289_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_019248324.1\|1785377_1786583_-	transporter	NA	NA	NA	NA
WP_003814013.1\|1787308_1788694_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA
WP_003814014.1\|1788712_1789318_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA
WP_010930939.1\|1789314_1791171_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA
WP_003814016.1\|1791167_1791968_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA
WP_005013753.1\|1791982_1793176_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA
WP_003814017.1\|1793243_1794218_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA
WP_010930940.1\|1794340_1795564_+	alcaligin siderophore export MFS transporter Bcr	S4TR35	Salmonella_phage	9.8e-24	29.4
WP_010930941.1\|1795674_1797879_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA
WP_003814020.1\|1798173_1798833_+	NAAT family transporter	NA	NA	NA	NA
WP_019247690.1\|1798840_1799047_-	hypothetical protein	NA	NA	NA	NA
WP_019248325.1\|1799385_1800141_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_003814022.1\|1800156_1800318_-	hypothetical protein	NA	NA	NA	NA
WP_003814023.1\|1800411_1800927_+	hypothetical protein	T1SAR8	Salmonella_phage	5.1e-06	44.6
WP_003814024.1\|1801199_1801517_+	virulence factor	NA	NA	NA	NA
WP_005014990.1\|1801704_1801941_-	hypothetical protein	NA	NA	NA	NA
WP_010930944.1\|1802231_1803587_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-83	47.5
WP_010930945.1\|1803633_1804974_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.6e-75	38.9
WP_010930946.1\|1805075_1805708_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_010930947.1\|1805707_1808077_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	7.6e-81	48.0
WP_010930948.1\|1808109_1809069_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.1e-57	40.2
WP_010929073.1\|1809055_1809742_+	hypothetical protein	NA	NA	NA	NA
WP_005015014.1\|1809738_1810071_+	multidrug transporter	NA	NA	NA	NA
WP_010929577.1\|1810186_1811137_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814040.1\|1811133_1813200_-	cation acetate symporter	NA	NA	NA	NA
WP_003814042.1\|1813199_1813472_-	DUF4212 domain-containing protein	NA	NA	NA	NA
WP_017685545.1\|1814166_1814256_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
WP_010930949.1\|1814255_1816040_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_010930950.1\|1816063_1818229_+	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.2e-24	27.1
WP_003814050.1\|1818239_1818839_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA
WP_003814052.1\|1821660_1822356_+	two-component system response regulator KdpE	NA	NA	NA	NA
WP_005013747.1\|1822364_1823315_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005013747.1\|1823413_1824364_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1864592 : 1978686

109

Salmonella_phage(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930208.1\|1864592_1865543_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247993.1\|1865967_1868427_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_010930977.1\|1868423_1869836_-	secretion protein	NA	NA	NA	NA
WP_010930978.1\|1869832_1870678_-	Flp pilus assembly protein CpaB	NA	NA	NA	NA
WP_010930979.1\|1870674_1871331_-	hypothetical protein	NA	NA	NA	NA
WP_010930980.1\|1871921_1873238_-	hypothetical protein	NA	NA	NA	NA
WP_003812728.1\|1873234_1873498_-	membrane protein	NA	NA	NA	NA
WP_003812730.1\|1873691_1873823_-	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_010930981.1\|1873849_1874545_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_010930982.1\|1874739_1875276_-	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	5.9e-50	55.5
WP_050833460.1\|1875304_1876906_-	protoheme IX synthesis protein	NA	NA	NA	NA
WP_010930984.1\|1876909_1878094_-	heme biosynthesis operon protein HemX	NA	NA	NA	NA
WP_010930985.1\|1878131_1878920_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_003820470.1\|1878952_1879897_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_010930986.1\|1880015_1880735_-	TerC family protein	A0A0S4KZH7	Pseudomonas_phage	1.4e-41	46.8
WP_010930987.1\|1880893_1881589_-	TerC family protein	W8EBD0	Pseudomonas_phage	2.7e-18	31.4
WP_003812748.1\|1881864_1882746_-	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	3.6e-20	32.1
WP_003812749.1\|1882765_1883926_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_010930988.1\|1883936_1884539_-	DUF2889 domain-containing protein	NA	NA	NA	NA
WP_010930989.1\|1884743_1887038_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_003812755.1\|1887199_1888129_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930990.1\|1888203_1888770_-	recombination regulator RecX	NA	NA	NA	NA
WP_003812760.1\|1888802_1889864_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.0e-113	64.0
WP_003812762.1\|1890103_1890793_+	response regulator transcription factor	NA	NA	NA	NA
WP_019247281.1\|1890770_1892267_+	sensor histidine kinase	W8CYF6	Bacillus_phage	1.3e-22	28.5
WP_003820458.1\|1892461_1894138_+	MHS family MFS transporter	NA	NA	NA	NA
WP_015041674.1\|1894389_1895166_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_010930993.1\|1895193_1896258_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-28	38.8
WP_010930994.1\|1896254_1898006_-	iron ABC transporter permease	NA	NA	NA	NA
WP_004567469.1\|1898034_1899072_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_010930995.1\|1899109_1899856_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003820449.1\|1899856_1900300_-	hypothetical protein	NA	NA	NA	NA
WP_010930996.1\|1900300_1900693_-	hypothetical protein	NA	NA	NA	NA
WP_010930997.1\|1900700_1901864_-	hypothetical protein	NA	NA	NA	NA
WP_010930998.1\|1902079_1902967_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023994674.1\|1902983_1904291_+	CoA transferase	NA	NA	NA	NA
WP_010931000.1\|1904342_1904759_-	hypothetical protein	NA	NA	NA	NA
WP_003812788.1\|1904912_1905812_+	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	3.7e-44	33.2
WP_010926366.1\|1905851_1907147_-	aspartate carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	1.4e-41	35.1
WP_003820436.1\|1907253_1907667_-	membrane protein	NA	NA	NA	NA
WP_010931001.1\|1907668_1908103_-	lipoprotein	NA	NA	NA	NA
WP_003812797.1\|1908228_1908360_-	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_023853497.1\|1908535_1909276_+	nuclease, EndA/NucM family	NA	NA	NA	NA
WP_023853503.1\|1909417_1909750_-	hypothetical protein	NA	NA	NA	NA
WP_005012067.1\|1910487_1911438_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_004567479.1\|1911548_1911731_+	hypothetical protein	NA	NA	NA	NA
WP_010931004.1\|1911830_1912427_-	lipoprotein	NA	NA	NA	NA
WP_010931005.1\|1912610_1913702_+	hypothetical protein	NA	NA	NA	NA
WP_003812822.1\|1914201_1914612_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_023852697.1\|1914670_1915000_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	2.7e-13	42.2
WP_010931007.1\|1915017_1917435_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_010926359.1\|1917447_1918470_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	1.0e-26	38.6
WP_003812832.1\|1918544_1918904_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_003812834.1\|1918919_1919117_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_005012808.1\|1919452_1920403_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_076879566.1\|1920501_1921452_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023853496.1\|1921591_1921837_+	hypothetical protein	NA	NA	NA	NA
WP_010931008.1\|1921951_1923400_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_005012067.1\|1923510_1924461_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929584.1\|1924559_1925510_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_003816756.1\|1925506_1925956_-	dUTP diphosphatase	S4TNT3	Salmonella_phage	3.7e-45	67.2
WP_062826501.1\|1926996_1927947_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_168169644.1\|1927964_1928150_+\|transposase	transposase	NA	NA	NA	NA
WP_003820420.1\|1928394_1929108_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_019247724.1\|1929230_1929458_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003816758.1\|1929752_1930391_-	DedA family protein	NA	NA	NA	NA
WP_010931011.1\|1930499_1931534_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_005012067.1\|1931530_1932481_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931012.1\|1932896_1933421_-	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
WP_004567322.1\|1933424_1933694_-	hypothetical protein	NA	NA	NA	NA
WP_010931013.1\|1933892_1934954_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_010931014.1\|1935037_1936672_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
WP_010931015.1\|1936673_1937477_-	ABC transporter permease	NA	NA	NA	NA
WP_010931016.1\|1937505_1938465_-	ABC transporter permease	NA	NA	NA	NA
WP_010931017.1\|1938468_1939983_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019248147.1\|1940019_1941024_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_033456131.1\|1941031_1941265_-	hypothetical protein	NA	NA	NA	NA
WP_010931018.1\|1941454_1941925_-	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_010931019.1\|1941960_1942572_-	LysE family translocator	NA	NA	NA	NA
WP_010931020.1\|1942602_1943226_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
WP_010931021.1\|1943306_1944839_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_023853282.1\|1944873_1946091_-	MFS transporter	NA	NA	NA	NA
WP_010931023.1\|1946158_1947190_-	alcohol dehydrogenase catalytic domain-containing protein	A0A2K9L339	Tupanvirus	1.8e-26	27.8
WP_010931024.1\|1947186_1948356_-	NAD(P)-binding protein	NA	NA	NA	NA
WP_010931025.1\|1948349_1949030_-	hypothetical protein	NA	NA	NA	NA
WP_010931026.1\|1949191_1950034_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010931027.1\|1950196_1951168_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010931028.1\|1951339_1952218_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_010931029.1\|1952240_1953311_-	FUSC family protein	NA	NA	NA	NA
WP_005013747.1\|1953351_1954302_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931030.1\|1954594_1955953_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_010931031.1\|1956064_1957792_+	sulfate permease	NA	NA	NA	NA
WP_019247978.1\|1959064_1959478_-	DUF126 domain-containing protein	NA	NA	NA	NA
WP_003816890.1\|1959491_1960727_-	DUF521 domain-containing protein	NA	NA	NA	NA
WP_010931033.1\|1960734_1961529_-	ABC transporter permease	NA	NA	NA	NA
WP_010931034.1\|1961525_1962329_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
WP_010931035.1\|1962355_1963333_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931036.1\|1963361_1964933_-	amidohydrolase	NA	NA	NA	NA
WP_014905903.1\|1964943_1965765_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_019247976.1\|1967489_1968920_-	MFS transporter	NA	NA	NA	NA
WP_010931038.1\|1968932_1969622_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003816876.1\|1969717_1971058_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_019247974.1\|1971059_1971317_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010931040.1\|1971670_1973263_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.0e-17	33.3
WP_003812368.1\|1973359_1974820_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
WP_010931041.1\|1975042_1975654_+	DUF2239 family protein	NA	NA	NA	NA
WP_005015810.1\|1975650_1976601_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930573.1\|1976801_1977611_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_010931070.1\|1977735_1978686_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

2029936 : 2153515

106

Synechococcus_phage(10.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|2029936_2030887_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_167561023.1\|2030985_2032995_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.8e-21	33.0
WP_010930543.1\|2033045_2034011_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_010930542.1\|2034000_2036862_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
WP_010930541.1\|2036864_2037371_+	lipoprotein signal peptidase	NA	NA	NA	NA
WP_010930540.1\|2037475_2038684_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
WP_033446178.1\|2038685_2039624_-	membrane protein	NA	NA	NA	NA
WP_010930538.1\|2039785_2040259_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_076879559.1\|2040255_2041206_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_004566334.1\|2041316_2041757_-	DUF937 domain-containing protein	NA	NA	NA	NA
WP_010930537.1\|2041885_2043115_-	lytic murein transglycosylase	NA	NA	NA	NA
WP_004566336.1\|2043153_2043975_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_029443743.1\|2044028_2045180_+	N-acetyltransferase	NA	NA	NA	NA
WP_023852690.1\|2045271_2045742_-	DUF1854 domain-containing protein	NA	NA	NA	NA
WP_019247811.1\|2048310_2050860_+	cyanophycin synthetase	NA	NA	NA	NA
WP_010930533.1\|2050930_2053504_+	cyanophycin synthetase	NA	NA	NA	NA
WP_003813568.1\|2053769_2053970_+	CsbD family protein	NA	NA	NA	NA
WP_003813570.1\|2054001_2054163_+	DUF1328 domain-containing protein	NA	NA	NA	NA
WP_003813572.1\|2054220_2054559_+	BON domain-containing protein	NA	NA	NA	NA
WP_076879557.1\|2054707_2055658_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_019247882.1\|2056432_2057101_+	arylesterase	NA	NA	NA	NA
WP_010930531.1\|2057082_2059038_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_004568486.1\|2059280_2060030_+	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
WP_003816518.1\|2060042_2060906_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_003816520.1\|2060909_2062325_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
WP_010930530.1\|2062458_2063187_-	redoxin family protein	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
WP_003811035.1\|2063325_2063526_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_003816523.1\|2063701_2064100_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_003816525.1\|2064123_2065524_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
WP_010930529.1\|2065642_2066395_-	hypothetical protein	NA	NA	NA	NA
WP_003816527.1\|2066683_2067361_-	hypothetical protein	NA	NA	NA	NA
WP_004568488.1\|2067387_2068167_-	3'-5' exonuclease	NA	NA	NA	NA
WP_003811022.1\|2068163_2069048_-	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
WP_019247478.1\|2069065_2069845_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.8e-32	46.9
WP_010930526.1\|2069829_2070588_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
WP_023852762.1\|2070725_2071361_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_010930525.1\|2071628_2072645_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010930524.1\|2072742_2073783_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
WP_003811011.1\|2073917_2075210_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
WP_003811007.1\|2076569_2076953_+	thioredoxin family protein	V9SJ74	Achromobacter_phage	8.1e-09	25.8
WP_010930523.1\|2076970_2077558_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
WP_010930522.1\|2077595_2078546_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930521.1\|2079530_2080304_-	ABC transporter permease	NA	NA	NA	NA
WP_010930520.1\|2080300_2081299_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930519.1\|2081383_2082160_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
WP_010930518.1\|2082314_2083919_-	ABC-F family ATPase	A0A1V0SKJ1	Klosneuvirus	1.2e-53	28.9
WP_003816541.1\|2084299_2085424_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_003810992.1\|2085550_2086174_+	TRAP transporter small permease subunit	NA	NA	NA	NA
WP_010930517.1\|2086170_2088072_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_010930516.1\|2088120_2088915_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_010930515.1\|2088927_2089929_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
WP_010930514.1\|2089925_2090375_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	2.0e-06	38.2
WP_010930513.1\|2090424_2091273_-	hydrolase	NA	NA	NA	NA
WP_005012808.1\|2091436_2092387_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019247780.1\|2092419_2092962_-	hypothetical protein	NA	NA	NA	NA
WP_005013747.1\|2093005_2093956_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930511.1\|2094111_2094438_-	cation:proton antiporter	NA	NA	NA	NA
WP_033446177.1\|2094434_2094716_-	K+/H+ antiporter subunit F	NA	NA	NA	NA
WP_023852885.1\|2094715_2095192_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA
WP_004568496.1\|2095191_2096820_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
WP_003810969.1\|2096816_2097161_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA
WP_010930509.1\|2097160_2100094_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
WP_065465821.1\|2101252_2102203_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003811452.1\|2102301_2102598_-	hypothetical protein	NA	NA	NA	NA
WP_010930508.1\|2102704_2103622_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930507.1\|2103626_2104340_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930506.1\|2104353_2105325_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930505.1\|2107074_2107425_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010930504.1\|2107428_2108616_+	MFS transporter	NA	NA	NA	NA
WP_010930503.1\|2109054_2109777_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
WP_005013747.1\|2110070_2111021_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019249376.1\|2111017_2111446_-	hypothetical protein	NA	NA	NA	NA
WP_003811538.1\|2112847_2113810_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930502.1\|2113925_2114879_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930501.1\|2114888_2115881_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930500.1\|2115932_2116688_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930499.1\|2116752_2117442_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_019248077.1\|2117663_2118614_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_010930497.1\|2118644_2119841_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_019247910.1\|2119831_2120611_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_019247909.1\|2120723_2121650_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930494.1\|2121735_2122680_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930493.1\|2122657_2123527_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_010930492.1\|2123770_2124394_+	glutathione S-transferase	NA	NA	NA	NA
WP_019247905.1\|2124708_2125008_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023995112.1\|2125021_2128096_-	autotransporter SphB2	NA	NA	NA	NA
WP_010930489.1\|2128225_2128900_+	response regulator transcription factor	NA	NA	NA	NA
WP_019247865.1\|2128892_2130707_+	sensor histidine kinase	NA	NA	NA	NA
WP_010930487.1\|2130760_2131708_-	hypothetical protein	NA	NA	NA	NA
WP_005012067.1\|2131812_2132763_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_023852967.1\|2133315_2134941_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
WP_010930475.1\|2134990_2136025_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
WP_010930476.1\|2136027_2137374_-	hypothetical protein	NA	NA	NA	NA
WP_010930477.1\|2137370_2138885_-	VWA domain-containing protein	NA	NA	NA	NA
WP_010930478.1\|2138875_2139886_-	VWA domain-containing protein	NA	NA	NA	NA
WP_010930479.1\|2140359_2141301_-	DUF58 domain-containing protein	NA	NA	NA	NA
WP_010930480.1\|2141309_2142278_-	AAA family ATPase	NA	NA	NA	NA
WP_010930481.1\|2143817_2144786_+	transporter	NA	NA	NA	NA
WP_010930482.1\|2144963_2145953_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010926609.1\|2145999_2146758_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930483.1\|2146947_2147685_+	TerC family protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
WP_005012808.1\|2147783_2148734_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003816696.1\|2148918_2149701_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
WP_003810743.1\|2149694_2150396_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_003810741.1\|2150635_2151238_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_005013747.1\|2152564_2153515_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

2222270 : 2297351

Moraxella_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|2222270_2223221_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012067.1\|2223319_2224270_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930622.1\|2224373_2225405_+	peptidase C45	NA	NA	NA	NA
WP_010930621.1\|2225418_2229042_-	5-oxoprolinase	NA	NA	NA	NA
WP_010930620.1\|2229120_2229633_-	winged helix DNA-binding protein	NA	NA	NA	NA
WP_019247163.1\|2230807_2231509_+	hypothetical protein	NA	NA	NA	NA
WP_019248349.1\|2231529_2232495_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_010930617.1\|2232508_2233000_+	TRAP transporter small permease	NA	NA	NA	NA
WP_010930616.1\|2234556_2235531_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_010930615.1\|2235537_2236038_+	TRAP transporter small permease	NA	NA	NA	NA
WP_010930614.1\|2237355_2239110_-	filamentous hemagglutinin transporter protein FhaC	NA	NA	NA	NA
WP_050833422.1\|2239102_2240233_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_010930612.1\|2240213_2242835_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_010930611.1\|2242897_2243632_-	molecular chaperone FimB	NA	NA	NA	NA
WP_019247159.1\|2243881_2244319_-	protein FimA	NA	NA	NA	NA
WP_039250273.1\|2244394_2255161_-	filamentous hemagglutinin/adhesin	A0A0R6PJK4	Moraxella_phage	3.6e-29	32.5
WP_010930609.1\|2255587_2256217_+	virulence factors two-component system response regulator BvgA	NA	NA	NA	NA
WP_014486076.1\|2256225_2259942_+	virulence factors two-component system sensor histidine kinase BvgS	A0A1V0SGX0	Hokovirus	4.2e-33	32.0
WP_003816497.1\|2259985_2260861_-	EAL domain-containing protein	NA	NA	NA	NA
WP_010930607.1\|2260994_2261789_-	putative hydro-lyase	NA	NA	NA	NA
WP_010930606.1\|2261846_2263196_-	amidase	NA	NA	NA	NA
WP_005013747.1\|2266381_2267332_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003811701.1\|2267448_2268168_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_010930605.1\|2268340_2269327_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_050833495.1\|2269327_2269810_+	TRAP transporter small permease	NA	NA	NA	NA
WP_003811706.1\|2269813_2271097_+	TRAP transporter large permease	NA	NA	NA	NA
WP_003811709.1\|2271093_2272032_+	citrate lyase subunit beta	NA	NA	NA	NA
WP_010930603.1\|2272028_2273738_+	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
WP_010930602.1\|2273747_2274995_+	Zn-dependent hydrolase	NA	NA	NA	NA
WP_003811716.1\|2276605_2277895_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_020699606.1\|2279032_2279791_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.7e-31	37.9
WP_010930601.1\|2280467_2281211_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930600.1\|2281285_2282026_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_010930599.1\|2282221_2283058_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_010930598.1\|2283108_2283879_-	TatD family hydrolase	NA	NA	NA	NA
WP_010930597.1\|2283928_2284981_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
WP_003811733.1\|2284977_2285604_-	dTMP kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
WP_010930596.1\|2285600_2286635_-	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_010930595.1\|2286813_2287830_+	folate-binding protein YgfZ	NA	NA	NA	NA
WP_005012067.1\|2287928_2288879_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012067.1\|2288977_2289928_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930797.1\|2292668_2293958_-	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_010930798.1\|2294076_2294514_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_010930799.1\|2294557_2295766_-	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_003810867.1\|2295912_2296377_+	GatB/YqeY domain-containing protein	A0A0K2FLI9	Brevibacillus_phage	3.9e-05	32.4
WP_005015810.1\|2296400_2297351_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2494639 : 2557399

Cedratvirus(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010929577.1\|2494639_2495590_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930742.1\|2496789_2497740_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010930661.1\|2499445_2500411_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930660.1\|2501165_2503274_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_061363663.1\|2503284_2504691_-	ferric reductase	NA	NA	NA	NA
WP_010930525.1\|2506763_2507780_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010929893.1\|2507971_2508589_-	isochorismatase family protein	NA	NA	NA	NA
WP_010929892.1\|2508604_2509636_-	hypothetical protein	NA	NA	NA	NA
WP_010929891.1\|2510502_2511255_-	maleate isomerase	NA	NA	NA	NA
WP_010930658.1\|2511555_2512707_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_029443796.1\|2512816_2513305_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_010930656.1\|2515748_2516519_-	ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	3.3e-09	29.2
WP_010930655.1\|2516515_2517292_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.3e-13	29.5
WP_019248318.1\|2517288_2519238_-	ABC transporter permease	NA	NA	NA	NA
WP_019248317.1\|2519329_2520538_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005012067.1\|2520584_2521535_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003820159.1\|2521902_2522388_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010930652.1\|2522732_2522969_-	membrane protein	NA	NA	NA	NA
WP_010930651.1\|2523177_2525163_+	poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA	NA	NA	NA	NA
WP_010930650.1\|2525168_2527274_+	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA	NA	NA	NA
WP_050833431.1\|2527277_2528537_+	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA
WP_015041299.1\|2528517_2529156_+	hypothetical protein	NA	NA	NA	NA
WP_010930648.1\|2529160_2530273_-	alkene reductase	NA	NA	NA	NA
WP_033446196.1\|2530325_2530619_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010930647.1\|2530832_2531282_+	hypothetical protein	NA	NA	NA	NA
WP_003820150.1\|2531288_2531624_+	MaoC family dehydratase	NA	NA	NA	NA
WP_010930646.1\|2531637_2532114_+	MaoC family dehydratase	NA	NA	NA	NA
WP_003820147.1\|2532117_2532510_+	RidA family protein	NA	NA	NA	NA
WP_033461849.1\|2532578_2533535_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930644.1\|2533535_2535656_+	acetate--CoA ligase family protein	NA	NA	NA	NA
WP_019247348.1\|2535664_2536369_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010930643.1\|2536527_2537556_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_010930642.1\|2537962_2539054_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.3e-26	35.6
WP_010930641.1\|2539050_2539854_-	ABC transporter permease	NA	NA	NA	NA
WP_003810039.1\|2539850_2540678_-	ABC transporter permease	NA	NA	NA	NA
WP_010930640.1\|2542315_2543440_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930639.1\|2543551_2544505_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003820136.1\|2544509_2545148_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010930638.1\|2545235_2546003_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003820133.1\|2546017_2546821_-	aspartate dehydrogenase	NA	NA	NA	NA
WP_010930636.1\|2546817_2547627_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_004568037.1\|2547623_2548607_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_003820128.1\|2548635_2549904_-	TRAP transporter large permease	NA	NA	NA	NA
WP_003810020.1\|2549906_2550431_-	TRAP transporter small permease	NA	NA	NA	NA
WP_010930635.1\|2550427_2551369_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_003810016.1\|2551378_2551693_-	NIPSNAP family protein	NA	NA	NA	NA
WP_010930634.1\|2551734_2552235_-	cupin domain-containing protein	NA	NA	NA	NA
WP_010929632.1\|2552578_2553595_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010930633.1\|2553988_2555254_-	aspartate kinase	NA	NA	NA	NA
WP_029443761.1\|2555353_2556388_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_010930742.1\|2556448_2557399_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2633314 : 2698938

Planktothrix_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|2633314_2634265_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003812577.1\|2634363_2635134_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-29	39.5
WP_010930397.1\|2635130_2635802_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
WP_003812581.1\|2635798_2636440_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
WP_010930396.1\|2636452_2637373_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
WP_010930395.1\|2637533_2638694_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930394.1\|2638735_2639686_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA
WP_010930393.1\|2640284_2640509_+	hypothetical protein	NA	NA	NA	NA
WP_162832303.1\|2640673_2642407_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_003812598.1\|2642489_2642759_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_003812601.1\|2642874_2643273_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA
WP_010930391.1\|2643283_2644240_-	glutathione synthase	NA	NA	NA	NA
WP_033446215.1\|2644376_2644922_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	9.1e-14	29.9
WP_003812608.1\|2644942_2646892_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.1e-125	36.0
WP_033453939.1\|2647279_2648056_+	response regulator transcription factor	NA	NA	NA	NA
WP_003812612.1\|2648061_2648454_+	hypothetical protein	NA	NA	NA	NA
WP_005013747.1\|2648875_2649826_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930389.1\|2649822_2650920_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	3.5e-20	37.3
WP_076879548.1\|2650951_2651902_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930388.1\|2652381_2653038_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_010930387.1\|2653052_2654720_-	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_010930386.1\|2654722_2655352_-	TRAP transporter small permease subunit	NA	NA	NA	NA
WP_014486072.1\|2655563_2656658_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_010930384.1\|2656802_2657615_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_010930383.1\|2657618_2659202_-	membrane protein	NA	NA	NA	NA
WP_010930382.1\|2659372_2660503_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_010930381.1\|2660689_2661766_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_010930380.1\|2661847_2662498_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_010930379.1\|2662512_2663916_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_004567445.1\|2664199_2665018_-	solute-binding protein	NA	NA	NA	NA
WP_010930378.1\|2665014_2665719_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-13	30.0
WP_010930377.1\|2666618_2667734_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004567447.1\|2667767_2668142_-	hypothetical protein	NA	NA	NA	NA
WP_010930376.1\|2668164_2669322_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA
WP_003812666.1\|2669334_2669568_-	lipoprotein	NA	NA	NA	NA
WP_019247523.1\|2670202_2673172_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA
WP_023853518.1\|2673186_2673396_-	hypothetical protein	NA	NA	NA	NA
WP_050833418.1\|2673547_2674177_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_023994978.1\|2674173_2676231_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_010930372.1\|2676287_2676968_-	DUF3306 domain-containing protein	NA	NA	NA	NA
WP_003820494.1\|2676964_2677525_-	DUF3305 domain-containing protein	NA	NA	NA	NA
WP_004567450.1\|2677531_2678629_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_010930371.1\|2678781_2679375_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA
WP_010930370.1\|2679371_2680664_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA
WP_003812685.1\|2680677_2681220_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
WP_010930369.1\|2681229_2682066_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_003820487.1\|2682099_2683161_-	chorismate synthase	A0A291AU41	Pandoravirus	2.9e-80	42.8
WP_019247210.1\|2683202_2684255_-	EAL domain-containing protein	NA	NA	NA	NA
WP_019247209.1\|2684270_2684573_-	hypothetical protein	NA	NA	NA	NA
WP_005012808.1\|2684714_2685665_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930368.1\|2685843_2687538_+	iron ABC transporter permease	NA	NA	NA	NA
WP_003809599.1\|2687534_2688620_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-27	37.7
WP_010930367.1\|2688667_2689567_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003809593.1\|2689577_2690222_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_010930366.1\|2691243_2694486_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_023852833.1\|2694496_2695651_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	3.3e-53	35.4
WP_010930364.1\|2695877_2696840_+	transaldolase	H6WFR1	Cyanophage	7.5e-11	29.2
WP_076879547.1\|2696938_2697889_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010929577.1\|2697987_2698938_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2914201 : 2973986

Oenococcus_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|2914201_2915152_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930231.1\|2915354_2916344_+	succinylglutamate desuccinylase	NA	NA	NA	NA
WP_010930230.1\|2916427_2916781_+	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_010930229.1\|2916858_2917467_-	hypothetical protein	NA	NA	NA	NA
WP_003811662.1\|2919140_2919719_-	amino acid synthesis family protein	NA	NA	NA	NA
WP_003811660.1\|2919743_2920697_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930228.1\|2920736_2921654_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_033446252.1\|2921775_2922702_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930226.1\|2922709_2923456_-	aldolase	NA	NA	NA	NA
WP_010930225.1\|2923782_2924724_+	LD-carboxypeptidase	NA	NA	NA	NA
WP_010930224.1\|2924950_2926648_-	sodium:solute symporter family protein	NA	NA	NA	NA
WP_010930223.1\|2927082_2928504_-	MFS transporter	NA	NA	NA	NA
WP_010930222.1\|2928657_2929437_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_019247966.1\|2929561_2930440_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930220.1\|2930545_2931670_+	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	1.5e-31	28.3
WP_003811636.1\|2931715_2932678_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930219.1\|2932670_2933525_+	amidohydrolase family protein	NA	NA	NA	NA
WP_003811632.1\|2933632_2934043_+	VOC family protein	NA	NA	NA	NA
WP_005013747.1\|2934039_2934990_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003813574.1\|2935088_2935970_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_003821443.1\|2936047_2937427_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_010930218.1\|2937465_2938311_-	membrane protein	NA	NA	NA	NA
WP_033451623.1\|2938326_2938641_-	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_010930217.1\|2938673_2939210_-	membrane protein	NA	NA	NA	NA
WP_003813585.1\|2939382_2939958_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
WP_003813586.1\|2940060_2940798_-	acetoacetyl-CoA reductase	NA	NA	NA	NA
WP_010930216.1\|2940865_2942503_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
WP_019247742.1\|2942610_2943366_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
WP_010930214.1\|2943353_2944316_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_033446255.1\|2944423_2945218_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_010930213.1\|2945279_2947355_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
WP_010930212.1\|2947519_2949895_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_010930211.1\|2949975_2951331_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_010930742.1\|2951340_2952291_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_162835035.1\|2952439_2952763_-	DUF3325 family protein	NA	NA	NA	NA
WP_033447956.1\|2954410_2954692_-	DUF3649 domain-containing protein	NA	NA	NA	NA
WP_003813609.1\|2954835_2957313_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_003813612.1\|2957406_2958369_-	DUF4880 domain-containing protein	NA	NA	NA	NA
WP_010930209.1\|2958361_2958895_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_010930208.1\|2959616_2960567_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003813618.1\|2961034_2961757_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930207.1\|2961811_2962795_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_005012067.1\|2962924_2963875_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003813621.1\|2963871_2964774_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010930206.1\|2964861_2965620_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_023853245.1\|2965632_2966724_-	cell division protein ZapE	NA	NA	NA	NA
WP_003813626.1\|2966821_2968249_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
WP_010930204.1\|2968478_2969693_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
WP_003813631.1\|2969738_2972609_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_005012067.1\|2973035_2973986_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2982717 : 3054738

Planktothrix_phage(20.0%)

tRNA,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|2982717_2983668_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003812405.1\|2983714_2984269_-	transcription elongation factor GreB	NA	NA	NA	NA
WP_003816844.1\|2984336_2985182_-	PHP domain-containing protein	NA	NA	NA	NA
WP_019248398.1\|2985251_2986220_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_029443925.1\|2986219_2988694_-	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA
WP_010930196.1\|2988866_2992793_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA
WP_019248079.1\|2993528_2996759_-	autotransporter SphB3	NA	NA	NA	NA
WP_010928340.1\|2997040_2997868_-	TatD family hydrolase	NA	NA	NA	NA
WP_003812422.1\|2997901_2998597_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	7.0e-35	38.6
WP_019247537.1\|2998589_2999870_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_023853218.1\|2999915_3000857_+	hypothetical protein	NA	NA	NA	NA
WP_010930191.1\|3000838_3002539_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.3e-50	28.3
WP_010926448.1\|3002641_3003745_+	peptide chain release factor 2	NA	NA	NA	NA
WP_010926447.1\|3003775_3004531_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930190.1\|3004537_3006058_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-82	36.0
WP_010930189.1\|3006100_3006403_+	membrane protein	NA	NA	NA	NA
WP_003812436.1\|3006399_3007032_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010930188.1\|3007110_3008976_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	9.3e-50	23.3
WP_020699602.1\|3008972_3009767_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-11	23.3
WP_010930186.1\|3009795_3010911_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930185.1\|3011815_3012694_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_019248175.1\|3012693_3013518_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.0e-08	22.7
WP_005012067.1\|3013685_3014636_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019248112.1\|3014848_3017698_+	EAL domain-containing protein	NA	NA	NA	NA
WP_010930182.1\|3017679_3018408_-	response regulator transcription factor	NA	NA	NA	NA
WP_010930180.1\|3020009_3020381_-	DUF2069 domain-containing protein	NA	NA	NA	NA
WP_003812701.1\|3020398_3021712_+	YihY family inner membrane protein	NA	NA	NA	NA
WP_003812703.1\|3021748_3022207_+	CBS domain-containing protein	NA	NA	NA	NA
WP_005012067.1\|3022319_3023270_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930178.1\|3023266_3024280_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_003812707.1\|3024419_3025406_+	homoserine kinase	NA	NA	NA	NA
WP_161633091.1\|3025764_3026472_-	DUF192 domain-containing protein	NA	NA	NA	NA
WP_003809618.1\|3028153_3028756_-	YhbY family RNA-binding protein	NA	NA	NA	NA
WP_010930175.1\|3028774_3029407_+	RlmE family RNA methyltransferase	NA	NA	NA	NA
WP_162096758.1\|3029451_3029703_-	hypothetical protein	NA	NA	NA	NA
WP_010930174.1\|3029644_3031531_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
WP_010930173.1\|3031549_3032392_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
WP_003819875.1\|3032388_3033747_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_003809629.1\|3033967_3034762_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_010930172.1\|3034992_3036486_-	exopolyphosphatase	NA	NA	NA	NA
WP_010930171.1\|3036721_3038803_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_014486066.1\|3038997_3040038_+	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
WP_010930169.1\|3040172_3041189_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_003809638.1\|3041210_3042068_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_010930167.1\|3042112_3042889_+	phosphate ABC transporter ATP-binding protein PstB	G9BWD6	Planktothrix_phage	4.3e-17	28.7
WP_005012067.1\|3043256_3044207_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005013747.1\|3044305_3045256_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003809441.1\|3045282_3045747_-	barstar family protein	NA	NA	NA	NA
WP_010930165.1\|3049358_3050231_-	hypothetical protein	NA	NA	NA	NA
WP_010930164.1\|3050273_3051428_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_010930163.1\|3051462_3052293_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_023853525.1\|3052376_3053921_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA
WP_010930161.1\|3053963_3054323_-	hypothetical protein	NA	NA	NA	NA
WP_003819794.1\|3054324_3054738_-\|holin	phage holin family protein	NA	NA	NA	NA

DBSCAN-SWA_21

3060713 : 3117898

uncultured_Mediterranean_phage(37.5%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930525.1\|3060713_3061730_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_010930157.1\|3062065_3062707_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_003809423.1\|3062797_3064234_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
WP_023853534.1\|3064391_3065465_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_010930155.1\|3065461_3066598_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
WP_003809416.1\|3066742_3067087_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
WP_010930154.1\|3067153_3069034_+	protein translocase subunit SecD	NA	NA	NA	NA
WP_003809411.1\|3069083_3070019_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
WP_010930525.1\|3070350_3071367_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_015041211.1\|3072304_3073732_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_010930151.1\|3073728_3074751_+	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
WP_003809396.1\|3074740_3075214_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_010930149.1\|3075354_3076242_+	CBS domain-containing protein	NA	NA	NA	NA
WP_014486064.1\|3076238_3077882_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_003819773.1\|3077878_3078886_-	aldo/keto reductase	NA	NA	NA	NA
WP_010930525.1\|3079716_3080733_+\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003817162.1\|3080832_3081465_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_003811911.1\|3081473_3081863_-	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
WP_010930146.1\|3081915_3082968_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_010930145.1\|3083831_3085538_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
WP_003811919.1\|3085611_3086112_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_010930144.1\|3086126_3088184_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_019247393.1\|3088210_3088504_-	response regulator	NA	NA	NA	NA
WP_003817154.1\|3088605_3089553_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_003811927.1\|3089565_3090441_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_003811929.1\|3090561_3091122_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_010930143.1\|3091156_3091480_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_003811933.1\|3091915_3092653_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
WP_005012067.1\|3092951_3093902_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003809486.1\|3094145_3094409_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_003819817.1\|3094482_3094764_+	hypothetical protein	NA	NA	NA	NA
WP_010930142.1\|3094780_3095641_-	M23 family metallopeptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
WP_003809479.1\|3095637_3095973_-	hypothetical protein	NA	NA	NA	NA
WP_010930141.1\|3096026_3096677_-	molybdopterin adenylyltransferase	NA	NA	NA	NA
WP_010930800.1\|3096882_3097833_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_033461972.1\|3097916_3099386_+	inorganic phosphate transporter	NA	NA	NA	NA
WP_019247197.1\|3099406_3100351_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_003809467.1\|3100396_3100714_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_010930139.1\|3100716_3101655_-	DnaJ domain-containing protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
WP_003819814.1\|3101832_3102318_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_010930138.1\|3102336_3102885_+	diguanylate cyclase	NA	NA	NA	NA
WP_023994624.1\|3102916_3103069_+	hypothetical protein	NA	NA	NA	NA
WP_023853531.1\|3103161_3104295_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010930137.1\|3104398_3105040_+	glutathione transferase	NA	NA	NA	NA
WP_003809454.1\|3107535_3108474_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_010930135.1\|3108499_3109690_+	acetate kinase	NA	NA	NA	NA
WP_010930134.1\|3109686_3110460_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_010930133.1\|3110489_3111683_-	phosphoglycerate kinase	NA	NA	NA	NA
WP_010930132.1\|3111800_3112811_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_010930131.1\|3112828_3114865_-	transketolase	NA	NA	NA	NA
WP_010930130.1\|3115059_3115800_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_005012067.1\|3115898_3116849_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012808.1\|3116947_3117898_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

3179060 : 3232690

Staphylococcus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005013747.1\|3179060_3180011_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930094.1\|3180282_3180864_+	OmpA family protein	NA	NA	NA	NA
WP_010930093.1\|3180989_3181715_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA
WP_010930092.1\|3181711_3182389_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_010930091.1\|3182604_3183786_+	MFS transporter	NA	NA	NA	NA
WP_010930090.1\|3184558_3184741_+	type II toxin-antitoxin system HicA family toxin	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
WP_005012808.1\|3184770_3185721_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_004566317.1\|3185850_3186243_+	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
WP_003821497.1\|3186519_3187431_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
WP_010930088.1\|3187555_3188530_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930087.1\|3188564_3188924_+	hypothetical protein	NA	NA	NA	NA
WP_010930086.1\|3190170_3190593_+	hypothetical protein	NA	NA	NA	NA
WP_010930085.1\|3190597_3191581_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930084.1\|3191592_3193251_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	2.3e-20	24.9
WP_003821488.1\|3193344_3193920_+	restriction endonuclease	NA	NA	NA	NA
WP_010930083.1\|3193944_3194934_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_029443845.1\|3195069_3196047_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_004566323.1\|3196172_3197246_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_010930081.1\|3197323_3198184_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_003813501.1\|3198238_3199135_-	TrmB family transcriptional regulator	NA	NA	NA	NA
WP_010930080.1\|3199176_3199992_-	hypothetical protein	NA	NA	NA	NA
WP_003821482.1\|3200105_3201338_+	hypothetical protein	NA	NA	NA	NA
WP_162892901.1\|3201410_3202565_+	tricarballylate utilization 4Fe-4S protein TcuB	NA	NA	NA	NA
WP_010930077.1\|3202585_3203989_+	FAD-dependent tricarballylate dehydrogenase TcuA	NA	NA	NA	NA
WP_010930076.1\|3204038_3205493_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_162096761.1\|3205597_3207010_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_003821476.1\|3207921_3208749_-	ABC transporter permease	NA	NA	NA	NA
WP_010930074.1\|3208745_3209618_-	ABC transporter permease	NA	NA	NA	NA
WP_003821473.1\|3209637_3210612_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010930073.1\|3211889_3212441_+	decarboxylase	NA	NA	NA	NA
WP_010929626.1\|3212528_3213479_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_003810865.1\|3213577_3214663_-	DNA polymerase IV	NA	NA	NA	NA
WP_010930072.1\|3214760_3215171_+	PaaI family thioesterase	NA	NA	NA	NA
WP_003810859.1\|3215786_3217700_+	S9 family peptidase	NA	NA	NA	NA
WP_010930070.1\|3220450_3221185_-	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	3.8e-63	49.6
WP_003810851.1\|3221348_3222530_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_003810850.1\|3222526_3222739_+	hypothetical protein	NA	NA	NA	NA
WP_003810847.1\|3222735_3223716_-	aldo/keto reductase	NA	NA	NA	NA
WP_010930068.1\|3223761_3224589_-	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
WP_023852913.1\|3224738_3226553_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
WP_003810840.1\|3226607_3226991_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_005012067.1\|3226987_3227938_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003810839.1\|3228049_3228301_-	hypothetical protein	NA	NA	NA	NA
WP_003810837.1\|3228494_3228710_-	hypothetical protein	NA	NA	NA	NA
WP_003810835.1\|3228806_3229925_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_003810832.1\|3230044_3230257_-	hypothetical protein	NA	NA	NA	NA
WP_010930064.1\|3230416_3230638_-	hypothetical protein	NA	NA	NA	NA
WP_005012067.1\|3230690_3231641_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_005012067.1\|3231739_3232690_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

3253445 : 3325447

Acinetobacter_phage(25.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|3253445_3254396_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930050.1\|3254494_3255151_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_010930049.1\|3255298_3258007_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.8e-15	24.0
WP_003813068.1\|3258016_3259036_+	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.5e-49	35.7
WP_010930742.1\|3259032_3259983_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_003813893.1\|3260081_3260570_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_003813895.1\|3260566_3261250_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_010926959.1\|3261279_3264735_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_010930046.1\|3264770_3265631_+	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_010930045.1\|3265759_3266677_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014905892.1\|3266814_3267795_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003813904.1\|3267854_3269645_+	acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	2.0e-25	26.1
WP_010930042.1\|3269641_3270418_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930041.1\|3270427_3270946_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003813909.1\|3271058_3273329_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_010930039.1\|3273540_3275772_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_003813915.1\|3276072_3276402_-	DUF2818 family protein	NA	NA	NA	NA
WP_003813916.1\|3276418_3277903_-	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA
WP_019247436.1\|3277913_3279416_-	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_010930037.1\|3279412_3281425_-	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_003813920.1\|3281442_3281751_-	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA
WP_003813921.1\|3281747_3282395_-	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA
WP_003813924.1\|3282412_3282901_-	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA
WP_003813926.1\|3282922_3283996_-	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_010930036.1\|3283995_3286323_-	NADH-quinone oxidoreductase subunit G	NA	NA	NA	NA
WP_003813930.1\|3286338_3287706_-	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA
WP_003813932.1\|3287702_3288197_-	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA
WP_010930035.1\|3288242_3289499_-	NADH-quinone oxidoreductase subunit D	NA	NA	NA	NA
WP_023997298.1\|3289501_3290122_-	NADH-quinone oxidoreductase subunit C	NA	NA	NA	NA
WP_003813941.1\|3290199_3290676_-	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA
WP_003813943.1\|3290712_3291072_-	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA
WP_010930034.1\|3291260_3292418_-	porin	NA	NA	NA	NA
WP_005012067.1\|3292730_3293681_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_033446246.1\|3293653_3294253_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003813949.1\|3294254_3294689_+	PaaI family thioesterase	NA	NA	NA	NA
WP_003813951.1\|3294685_3295120_+	hypothetical protein	NA	NA	NA	NA
WP_003813952.1\|3295103_3295907_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003813954.1\|3295923_3296739_-	DNA repair exonuclease	NA	NA	NA	NA
WP_020699608.1\|3296735_3297551_-	diacylglycerol kinase	NA	NA	NA	NA
WP_010930033.1\|3297697_3298399_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003813960.1\|3298426_3300385_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
WP_005013747.1\|3300467_3301418_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010930032.1\|3301638_3302307_+	transcriptional regulator	NA	NA	NA	NA
WP_010930031.1\|3302430_3303537_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_010930029.1\|3306648_3308142_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_010926969.1\|3308156_3308828_+	transcriptional regulator	NA	NA	NA	NA
WP_010930028.1\|3308871_3309324_-	azurin	NA	NA	NA	NA
WP_010930027.1\|3309506_3310154_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_023853163.1\|3310257_3312306_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
WP_010930025.1\|3312302_3314315_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
WP_010930024.1\|3314340_3315675_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_003813981.1\|3315783_3316776_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003813982.1\|3316842_3318927_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_019248051.1\|3318951_3319923_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010930022.1\|3320051_3321083_-	hypothetical protein	NA	NA	NA	NA
WP_010930021.1\|3321086_3322238_-	cystathionine beta-lyase	NA	NA	NA	NA
WP_010930020.1\|3322441_3323332_+	transcriptional regulator LrhA	NA	NA	NA	NA
WP_003813987.1\|3323409_3324234_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_010930158.1\|3324430_3325447_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

3333081 : 3385033

Synechococcus_phage(15.38%)

terminase,tRNA,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930018.1\|3333081_3335313_-\|holin	choline BCCT transporter BetT	NA	NA	NA	NA
WP_010930017.1\|3336100_3336547_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_003813996.1\|3336568_3337315_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_003813997.1\|3337458_3338436_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_010930016.1\|3339069_3339681_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
WP_003813999.1\|3339674_3340892_-	threonine ammonia-lyase	NA	NA	NA	NA
WP_005013747.1\|3341032_3341983_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_003814000.1\|3341979_3342699_-	lipoprotein	NA	NA	NA	NA
WP_003821234.1\|3342819_3344979_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_003814002.1\|3345069_3345339_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_005019401.1\|3345427_3345634_-	hypothetical protein	NA	NA	NA	NA
WP_003814003.1\|3345632_3346160_+	lipoprotein	NA	NA	NA	NA
WP_003814004.1\|3346178_3346958_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_010930015.1\|3347125_3348142_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_003814006.1\|3348214_3348706_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_019248169.1\|3348716_3350432_-	acetolactate synthase 3 catalytic subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	9.1e-60	30.1
WP_010931443.1\|3352974_3353577_-	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
WP_010931444.1\|3353699_3353942_-	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
WP_010931445.1\|3353947_3355003_-	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.6e-97	50.6
WP_010931446.1\|3355031_3356450_-	DUF4055 domain-containing protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
WP_010931447.1\|3356452_3357730_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
WP_019247942.1\|3357716_3358202_-\|transposase	transposase	C7U0W1	Enterobacteria_phage	7.3e-39	61.5
WP_005012067.1\|3358841_3359792_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_161633094.1\|3360048_3360738_-	hypothetical protein	NA	NA	NA	NA
WP_023853179.1\|3360730_3360982_-	transcriptional regulator	NA	NA	NA	NA
WP_010931451.1\|3361536_3362148_+	S24 family peptidase	NA	NA	NA	NA
WP_019247378.1\|3362219_3362426_+	hypothetical protein	NA	NA	NA	NA
WP_005012067.1\|3362677_3363628_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_019248926.1\|3363726_3364800_-	hypothetical protein	NA	NA	NA	NA
WP_010931475.1\|3364967_3365762_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010925795.1\|3365801_3366326_-	DUF934 domain-containing protein	NA	NA	NA	NA
WP_010931474.1\|3366318_3368061_-	nitrite/sulfite reductase	NA	NA	NA	NA
WP_010931473.1\|3368270_3369029_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
WP_010931472.1\|3369031_3369739_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
WP_014905407.1\|3369755_3370637_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_019247734.1\|3370647_3371406_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_019248554.1\|3371374_3372130_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010931468.1\|3372199_3373618_+	amidase	NA	NA	NA	NA
WP_003819076.1\|3373639_3374290_-	carbonic anhydrase	NA	NA	NA	NA
WP_033446132.1\|3374423_3374759_-	ASCH domain-containing protein	NA	NA	NA	NA
WP_005015810.1\|3374847_3375798_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931467.1\|3375874_3377695_+	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
WP_010931466.1\|3377699_3378773_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
WP_003814230.1\|3378895_3379864_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA
WP_010927008.1\|3379937_3380849_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
WP_003814226.1\|3380867_3381440_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_010931465.1\|3381520_3382069_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_010931464.1\|3382068_3383658_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
WP_003814221.1\|3383727_3383967_-	DNA-binding protein	NA	NA	NA	NA
WP_023995141.1\|3384007_3385033_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA

DBSCAN-SWA_25

3390357 : 3452596

uncultured_Mediterranean_phage(40.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005013747.1\|3390357_3391308_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931401.1\|3391406_3392357_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_003814206.1\|3392617_3393712_+	porin	NA	NA	NA	NA
WP_033446149.1\|3393802_3394675_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_003814203.1\|3394696_3395536_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.1e-66	48.9
WP_010931459.1\|3395611_3397129_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_010931458.1\|3397225_3398326_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_010931457.1\|3398342_3398765_-	SnoaL-like domain-containing protein	NA	NA	NA	NA
WP_003814195.1\|3398787_3399000_-	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_010931456.1\|3399046_3399967_-	branched-chain amino acid transaminase	NA	NA	NA	NA
WP_010931455.1\|3400149_3400899_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_003814188.1\|3400901_3401231_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_033446148.1\|3401518_3402871_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.1e-51	34.4
WP_003814185.1\|3402882_3403266_-	thioredoxin family protein	NA	NA	NA	NA
WP_010931453.1\|3403327_3404128_+	EI24 domain-containing protein	NA	NA	NA	NA
WP_005015810.1\|3404226_3405177_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931477.1\|3405232_3406045_+	competence/damage-inducible protein A	NA	NA	NA	NA
WP_003814178.1\|3406203_3407052_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_019248367.1\|3407252_3411647_+	dermonecrotic toxin	NA	NA	NA	NA
WP_010931479.1\|3411740_3412718_-	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA
WP_003814172.1\|3413104_3413683_+	TIGR01841 family phasin	NA	NA	NA	NA
WP_010931480.1\|3413830_3414880_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_033446151.1\|3414920_3415646_-	arginyltransferase	NA	NA	NA	NA
WP_003814161.1\|3416449_3417031_-	NUDIX hydrolase	NA	NA	NA	NA
WP_010931482.1\|3417027_3417939_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003820995.1\|3418054_3418456_+	DoxX family protein	NA	NA	NA	NA
WP_010927005.1\|3418473_3419076_-	DUF2946 family protein	NA	NA	NA	NA
WP_003814152.1\|3419133_3419517_-	membrane protein	NA	NA	NA	NA
WP_005012067.1\|3420215_3421166_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931483.1\|3421314_3422025_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010931484.1\|3422096_3423758_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
WP_010931485.1\|3423832_3424798_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003808542.1\|3424852_3425761_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_039249903.1\|3426067_3428356_-	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_010931487.1\|3428497_3429469_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010929956.1\|3429508_3430459_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010931488.1\|3430769_3431711_+	ABC transporter permease	NA	NA	NA	NA
WP_003808549.1\|3431710_3432544_+	ABC transporter permease	NA	NA	NA	NA
WP_010931489.1\|3432547_3434398_+	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-17	29.2
WP_010931490.1\|3436077_3437613_+	M81 family metallopeptidase	NA	NA	NA	NA
WP_010931491.1\|3437706_3438648_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010931492.1\|3438758_3439559_+	hypothetical protein	NA	NA	NA	NA
WP_003808562.1\|3439620_3440127_-	SRPBCC family protein	NA	NA	NA	NA
WP_003808563.1\|3440123_3440462_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010931493.1\|3440890_3443410_+	AsmA family protein	NA	NA	NA	NA
WP_003808567.1\|3443406_3443793_+	hypothetical protein	NA	NA	NA	NA
WP_010931494.1\|3443800_3444934_-	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA
WP_003808570.1\|3444997_3445249_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.6e-18	53.4
WP_003808574.1\|3445303_3445813_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.2e-28	42.1
WP_003808577.1\|3445833_3446454_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_023853086.1\|3446529_3447633_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_010931496.1\|3449461_3450283_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_033446133.1\|3450279_3451170_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_010931070.1\|3451645_3452596_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_26

3565845 : 3619665

uncultured_Caudovirales_phage(23.53%)

tail,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010930179.1\|3565845_3566796_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929827.1\|3566912_3567980_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_010929828.1\|3568055_3571184_-	Rne/Rng family ribonuclease	NA	NA	NA	NA
WP_033446197.1\|3571751_3572657_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_010929830.1\|3572659_3573331_+	HAD family hydrolase	NA	NA	NA	NA
WP_010929831.1\|3573487_3574447_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_003821340.1\|3574454_3575117_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_010929956.1\|3575113_3576064_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_010931442.1\|3576738_3576990_+	hypothetical protein	NA	NA	NA	NA
WP_019247789.1\|3577052_3577535_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
WP_010931440.1\|3577536_3577737_+	hypothetical protein	NA	NA	NA	NA
WP_010931439.1\|3577736_3578132_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
WP_010931438.1\|3578128_3578527_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
WP_010931437.1\|3578523_3578946_+	DUF4128 domain-containing protein	NA	NA	NA	NA
WP_010931436.1\|3578953_3579454_+	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
WP_010931435.1\|3579708_3580227_+	hypothetical protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
WP_003813412.1\|3580236_3580566_+	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
WP_010931434.1\|3580583_3580874_+	DUF1799 domain-containing protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
WP_010931433.1\|3580899_3583512_+\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
WP_010931432.1\|3583521_3583881_+	hypothetical protein	NA	NA	NA	NA
WP_010931431.1\|3583948_3584482_+	DUF1833 family protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
WP_010931430.1\|3584478_3584868_+	C40 family peptidase	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
WP_010931429.1\|3584860_3588817_+	DUF1983 domain-containing protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
WP_010931428.1\|3588821_3589238_+	hypothetical protein	NA	NA	NA	NA
WP_124740660.1\|3589218_3589416_+	hypothetical protein	NA	NA	NA	NA
WP_010926428.1\|3589456_3589720_+	hypothetical protein	A0A1B0V3F2	Roseobacter_phage	7.2e-09	41.8
WP_010931426.1\|3589719_3590532_+	hypothetical protein	NA	NA	NA	NA
WP_010931425.1\|3590536_3590779_+	hypothetical protein	NA	NA	NA	NA
WP_010931424.1\|3590757_3591309_+	lysozyme	NA	NA	NA	NA
WP_010931423.1\|3591308_3591824_+	DUF2514 family protein	NA	NA	NA	NA
WP_010926433.1\|3591820_3592102_-	hypothetical protein	NA	NA	NA	NA
WP_010931422.1\|3592101_3592323_-	hypothetical protein	NA	NA	NA	NA
WP_010931421.1\|3592651_3593323_-	SOS response-associated peptidase	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
WP_010931420.1\|3593678_3594365_-	response regulator	NA	NA	NA	NA
WP_003814635.1\|3594345_3594918_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
WP_003814636.1\|3594983_3596714_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
WP_010931419.1\|3596766_3597195_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_003814641.1\|3597197_3597878_+	protein TolQ	NA	NA	NA	NA
WP_003814643.1\|3597877_3598336_+	protein TolR	NA	NA	NA	NA
WP_010931418.1\|3598372_3599347_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_010931417.1\|3599363_3600680_+	Tol-Pal system protein TolB	NA	NA	NA	NA
WP_003814650.1\|3600711_3601209_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
WP_003814652.1\|3601295_3601985_+	tol-pal system protein YbgF	NA	NA	NA	NA
WP_010931416.1\|3601984_3603034_+	iron ABC transporter permease	NA	NA	NA	NA
WP_003814657.1\|3603030_3603825_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
WP_019247923.1\|3603993_3604344_+	hypothetical protein	NA	NA	NA	NA
WP_019247922.1\|3604319_3604877_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_039249767.1\|3606006_3607005_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_033446233.1\|3606967_3607402_+	carbon monoxide dehydrogenase	NA	NA	NA	NA
WP_010929974.1\|3608918_3609803_+	DMT family transporter	NA	NA	NA	NA
WP_033461521.1\|3609799_3610027_-	hypothetical protein	NA	NA	NA	NA
WP_005015810.1\|3610044_3610995_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_077598842.1\|3610974_3612054_-	cardiolipin synthase ClsB	NA	NA	NA	NA
WP_010929972.1\|3612050_3612911_-	endonuclease	NA	NA	NA	NA
WP_003807038.1\|3613023_3614814_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
WP_023852857.1\|3614854_3615505_-	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	8.6e-11	28.4
WP_010929971.1\|3615520_3615829_-	FmdB family transcriptional regulator	NA	NA	NA	NA
WP_010929970.1\|3615994_3617281_-	membrane protein	NA	NA	NA	NA
WP_005012067.1\|3618714_3619665_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_27

3856690 : 3911760

Bacillus_phage(28.57%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003815821.1\|3856690_3857140_+\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
WP_010929719.1\|3857658_3857799_-	hypothetical protein	NA	NA	NA	NA
WP_010929718.1\|3857806_3857968_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_076879590.1\|3858043_3858259_+	hypothetical protein	NA	NA	NA	NA
WP_005012067.1\|3858245_3859196_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929717.1\|3860239_3860518_-	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_010929716.1\|3861660_3862209_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.3e-28	43.1
WP_010929715.1\|3862271_3863951_-	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
WP_010929714.1\|3863947_3865699_-	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
WP_003817696.1\|3865695_3865821_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
WP_004567834.1\|3865834_3866989_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_023852659.1\|3867004_3868582_-	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_010929712.1\|3868707_3869253_-	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_005012067.1\|3869812_3870763_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929711.1\|3871493_3872474_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_010929710.1\|3872487_3873612_+	CoA transferase	NA	NA	NA	NA
WP_003814321.1\|3873619_3875374_-	gamma-glutamyltransferase	NA	NA	NA	NA
WP_010929709.1\|3875480_3876380_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003814324.1\|3876444_3877428_-	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
WP_010929708.1\|3877563_3878544_+	AEC family transporter	NA	NA	NA	NA
WP_010929707.1\|3878560_3879952_-	class II fumarate hydratase	NA	NA	NA	NA
WP_010929706.1\|3880103_3880640_+\|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_019247543.1\|3880570_3881956_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.5e-17	30.3
WP_033446171.1\|3882098_3882719_-	membrane protein	NA	NA	NA	NA
WP_033461782.1\|3882823_3884713_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	2.5e-79	32.8
WP_003814337.1\|3884709_3885651_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003814339.1\|3885756_3886806_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
WP_010929704.1\|3887058_3887760_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA
WP_010929703.1\|3887756_3888455_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_010929702.1\|3888455_3889811_+	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
WP_010929701.1\|3889807_3890299_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003814351.1\|3890317_3891274_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_003814355.1\|3892684_3894787_-	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_003814356.1\|3894957_3896001_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_003814358.1\|3896044_3896788_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003814363.1\|3897809_3898220_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
WP_010929700.1\|3899169_3899967_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_005012808.1\|3900065_3901016_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_039251057.1\|3900988_3901930_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_005012067.1\|3901926_3902877_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929681.1\|3902991_3903993_-	HindIII family type II restriction endonuclease	NA	NA	NA	NA
WP_010929682.1\|3904083_3904650_-	preprotein translocase subunit SecD	NA	NA	NA	NA
WP_010929683.1\|3904968_3906882_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_010929684.1\|3906923_3908354_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_019247308.1\|3908466_3909879_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_003818947.1\|3909895_3910591_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_005012067.1\|3910809_3911760_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_28

4042652 : 4115973

uncultured_Mediterranean_phage(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005012067.1\|4042652_4043603_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010931563.1\|4043599_4044790_-	voltage-gated potassium channel protein	NA	NA	NA	NA
WP_010931562.1\|4044911_4045676_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA
WP_003807735.1\|4045762_4046866_-	AI-2E family transporter	NA	NA	NA	NA
WP_010930158.1\|4047057_4048074_-\|transposase	IS110-like element IS1663 family transposase	NA	NA	NA	NA
WP_003815102.1\|4048355_4048844_+	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	A0A1B1IUK5	uncultured_Mediterranean_phage	1.6e-17	34.1
WP_003817656.1\|4050187_4050868_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.5e-15	34.8
WP_010931560.1\|4050929_4051781_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_010931559.1\|4051777_4052575_-	thiazole synthase	NA	NA	NA	NA
WP_010931558.1\|4052678_4053572_-	cobalamin-binding protein	NA	NA	NA	NA
WP_010931557.1\|4053583_4055473_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	7.6e-07	30.8
WP_010931556.1\|4055809_4059583_+	methionine synthase	A0A140XBC7	Dickeya_phage	8.6e-10	50.8
WP_005012067.1\|4059579_4060530_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929826.1\|4060838_4061531_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	6.3e-36	41.6
WP_003818232.1\|4061904_4062405_-	SET domain-containing protein	NA	NA	NA	NA
WP_023853391.1\|4062511_4063432_+	bestrophin	NA	NA	NA	NA
WP_010929823.1\|4063448_4063925_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_023853380.1\|4064027_4065869_+	biosynthetic-type acetolactate synthase large subunit	E4WLQ6	Ostreococcus_tauri_virus	2.2e-59	30.4
WP_010929821.1\|4065924_4066683_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010929820.1\|4066710_4068144_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_003818225.1\|4068217_4068997_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010929819.1\|4069009_4069843_-	ABC transporter permease	NA	NA	NA	NA
WP_020699616.1\|4069851_4070622_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-24	33.9
WP_010929818.1\|4070621_4071686_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010929817.1\|4071837_4074465_-	DNA topoisomerase III	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	6.1e-23	25.4
WP_010929816.1\|4074528_4077150_+	DUF4401 domain-containing protein	NA	NA	NA	NA
WP_003815964.1\|4078077_4078536_-	DUF494 domain-containing protein	NA	NA	NA	NA
WP_010929815.1\|4078814_4081058_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_010929814.1\|4081254_4083279_-	TRAP transporter permease	NA	NA	NA	NA
WP_019248007.1\|4083402_4084365_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_010929812.1\|4084576_4085716_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA
WP_010929811.1\|4085738_4086704_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_004565905.1\|4086899_4088090_+	acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	4.4e-21	26.7
WP_003815955.1\|4088103_4088349_+	DUF1653 domain-containing protein	NA	NA	NA	NA
WP_010929810.1\|4088377_4090399_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA
WP_003815953.1\|4090445_4092053_-	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	5.4e-22	57.3
WP_010929808.1\|4092153_4093323_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_005013747.1\|4096204_4097155_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
WP_010929699.1\|4097311_4097635_+	phosphate starvation-inducible protein	NA	NA	NA	NA
WP_023853200.1\|4097739_4098780_-	cyclase	NA	NA	NA	NA
WP_010929697.1\|4098785_4099565_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
WP_003807672.1\|4099610_4099907_-	YciI family protein	NA	NA	NA	NA
WP_003807674.1\|4099932_4100208_-	muconolactone Delta-isomerase	NA	NA	NA	NA
WP_003819086.1\|4100264_4100909_-	CoA transferase subunit B	NA	NA	NA	NA
WP_010929696.1\|4100908_4101595_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
WP_033446325.1\|4101793_4102576_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_010929694.1\|4102626_4103352_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_010929693.1\|4103383_4104733_-	short-chain fatty acid transporter	NA	NA	NA	NA
WP_010929692.1\|4104844_4105777_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_033454003.1\|4106234_4109030_-\|protease	serine protease autotransporter SphB1	NA	NA	NA	NA
WP_023994893.1\|4109623_4112467_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_010929689.1\|4112637_4113357_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
WP_010929688.1\|4113395_4113944_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
WP_019248089.1\|4114098_4114998_+	virginiamycin B lyase	NA	NA	NA	NA
WP_005012808.1\|4115022_4115973_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017403

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection