CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017189	Xanthomonas axonopodis pv. glycines str. 8ra plasmid p_XAG_1, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP017188	Xanthomonas citri pv. glycines str. 8ra chromosome, complete genome	3 crisprs	DinG,cas3,WYL,DEDDh,RT,csa3	0	7	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017188_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017188_1

125238-125422

Orphan

Consensus_repeat	Method
GTGCAGGTGCGCCCCTCGGCCGAGCA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP017188_1

>merge|NZ_CP017188|1|125238-125422|CRISPRCasFinder
GTGCAGGTTCGCCCGGCCGCCGACCAGCTCGCCCAGCAGACACTGGAACGCGACAGCGGCATCCACACCCTGGCCGCCGTGCAGGTGCGCCCCTCGGCCGAGCAATTGGCCGCCCTGGCCTCCGAACAGGCCGGCCCGCGCATCGTCACCTTGGCGGCGGTGCAGGTGCGCCCTTCGGCCGAGCA

>NZ_CP017188|1|1|125238-125422|CRISPRCasFinder
GTGCAGGTTCGCCCGGCCGCCGACCA	GCTCGCCCAGCAGACACTGGAACGCGACAGCGGCATCCACACCCTGGCCGCC
GTGCAGGTGCGCCCCTCGGCCGAGCA	ATTGGCCGCCCTGGCCTCCGAACAGGCCGGCCCGCGCATCGTCACCTTGGCGGCG
GTGCAGGTGCGCCCTTCGGCCGAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017188.1\|WP_003488348.1\|125623_126100_+\|tRNA-(cytidine(34)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|349967
NZ_CP017188.1\|WP_033483032.1\|132262_133990_-\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP017188.1\|WP_003468167.1\|117025_117184_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP017188.1\|WP_005912231.1\|117248_118259_-\|3-beta-hydroxysteroid-dehydrogenase	unknown	unknown	gnl\|CDD\|187552
NZ_CP017188.1\|WP_005912222.1\|123310_124327_-\|3-oxoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|181732
NZ_CP017188.1\|WP_005912258.1\|115325_116429_+\|D-alanine--D-alanine-ligase	unknown	unknown	gnl\|CDD\|234993
NZ_CP017188.1\|WP_003488368.1\|135615_135939_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017188.1\|WP_029827832.1\|128496_129249_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017188.1\|WP_003488921.1\|124428_124749_-\|DUF4156-domain-containing-protein	unknown	unknown	gnl\|CDD\|372679
NZ_CP017188.1\|WP_016849540.1\|134200_134860_-\|DNA-directed-RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|235770
NZ_CP017188.1\|WP_016849538.1\|130770_132213_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP017188.1\|WP_016850613.1\|126448_127678_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP017188.1\|WP_003488365.1\|134866_135619_-\|flagellar-biosynthetic-protein-FliP	unknown	unknown	gnl\|CDD\|235566
NZ_CP017188.1\|WP_016849672.1\|121011_121914_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|235135
NZ_CP017188.1\|WP_016850614.1\|127770_128394_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017188.1\|WP_016849671.1\|120473_120857_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|223799
NZ_CP017188.1\|WP_026006950.1\|118489_120151_-\|peptide-synthase	unknown	unknown	gnl\|CDD\|236443
NZ_CP017188.1\|WP_015471584.1\|122029_123103_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP017188.1\|WP_016849669.1\|114487_115132_-\|sterol-binding-protein	unknown	unknown	gnl\|CDD\|225706
NZ_CP017188.1\|WP_016849537.1\|129439_130786_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114

Protein	Function_ID	Function_description	E-value
NZ_CP017188.1\|WP_003488348.1\|125623_126100_+\|tRNA-(cytidine(34)-2'-O)-methyltransferase	gnl\|CDD\|349967	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL. tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	2.47465e-81
NZ_CP017188.1\|WP_033483032.1\|132262_133990_-\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP017188.1\|WP_003468167.1\|117025_117184_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	0.00222793
NZ_CP017188.1\|WP_005912231.1\|117248_118259_-\|3-beta-hydroxysteroid-dehydrogenase	gnl\|CDD\|187552	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs. Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.39854e-82
NZ_CP017188.1\|WP_005912222.1\|123310_124327_-\|3-oxoacyl-ACP-synthase-III	gnl\|CDD\|181732	PRK09258, PRK09258, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed.	0
NZ_CP017188.1\|WP_005912258.1\|115325_116429_+\|D-alanine--D-alanine-ligase	gnl\|CDD\|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	0
NZ_CP017188.1\|WP_003488921.1\|124428_124749_-\|DUF4156-domain-containing-protein	gnl\|CDD\|372679	pfam13698, DUF4156, Domain of unknown function (DUF4156). The function of this family is unknown but members are annotated as putative lipoprotein outer membrane proteins.	9.95984e-10
NZ_CP017188.1\|WP_016849540.1\|134200_134860_-\|DNA-directed-RNA-polymerase-sigma-70-factor	gnl\|CDD\|235770	PRK06288, PRK06288, RNA polymerase sigma factor WhiG; Reviewed.	1.51354e-22
NZ_CP017188.1\|WP_016849538.1\|130770_132213_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.86755e-32
NZ_CP017188.1\|WP_016850613.1\|126448_127678_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.02349e-20
NZ_CP017188.1\|WP_003488365.1\|134866_135619_-\|flagellar-biosynthetic-protein-FliP	gnl\|CDD\|235566	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed.	1.19872e-96
NZ_CP017188.1\|WP_016849672.1\|121011_121914_-\|alpha/beta-hydrolase	gnl\|CDD\|235135	PRK03592, PRK03592, haloalkane dehalogenase; Provisional.	1.15519e-47
NZ_CP017188.1\|WP_016849671.1\|120473_120857_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	3.26554e-20
NZ_CP017188.1\|WP_026006950.1\|118489_120151_-\|peptide-synthase	gnl\|CDD\|236443	PRK09274, PRK09274, peptide synthase; Provisional.	0
NZ_CP017188.1\|WP_015471584.1\|122029_123103_-\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	4.09373e-66
NZ_CP017188.1\|WP_016849669.1\|114487_115132_-\|sterol-binding-protein	gnl\|CDD\|225706	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown].	8.41697e-43
NZ_CP017188.1\|WP_016849537.1\|129439_130786_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	7.3029e-175

>NZ_CP017188.1|WP_003488921.1|124428_124749_-|DUF4156-domain-containing-protein
MRVLMLSVLVATSTAACTWVPIEQSGKSVRVLPAGPVPAGCQQQGEVVVTVKSKVGFYNRNPLRVQEELETLARNEAPGANANAVQAQGQPADGSQRFNAFRCPPR
>NZ_CP017188.1|WP_005912222.1|123310_124327_-|3-oxoacyl-ACP-synthase-III
MLFQNVSIAGLAHVDAPHTLTSKEINERLQPTYDRLGIKTDVLGDVAGIHARRLWDQDVQASDAATQAARKALIDAGIGIEKIGLLVNTSVSRDYLEPSTASIVSGNLGVGDHCVTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARTELVPDAPRYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFMAARQVLGWAVDELDQFVIHQVSRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGRLKKGDRIALLGIGSGLNCSMAEVVW
>NZ_CP017188.1|WP_015471584.1|122029_123103_-|Fic-family-protein
MDFSLVALVARKELADQALGRLDGITLMLPDPELFLYQYVRKEALLSSQIEGTQSSLSDLLLFEMDAAPGVPIDDVEEVSNYVAALNHGLRRLREDDFPLSLRLIREMHALLLQGGRGASKQPGEFRRSQVWVGGASPALAHFVPPPPDALPDTLAALEQFLHASQGQMPSLVKAALAHVQFETIHPFSDGNGRLGRLLITLILCSEGVLREPSLYLSLYFKRRRADYYDRLNAVRLNGDWEGWLGFFLDGVAETAQQAVDTAQRLLALLARDRARIAALGQRAGNVGLVFEQFARRVVLAVPQVAPHLSLSVPTIRAAVRTLQELDIVNELTGQQRHRIFAYQAYLDILSEGAQPL
>NZ_CP017188.1|WP_016849672.1|121011_121914_-|alpha/beta-hydrolase
MNYPGYPFPPKRLEVRPGVAMSYLDEGPRDGEVVVMLHGNPSWSYLWRHLVSGLSDRYRCIVPDHIGMGLSDKPDDAPDAQPRYDYTLQSRVDDLDTLLRHLGITGPVTLAVHDWGGMIGFSWALSHHAQVKRLVITNTAAFPLPAEKPMPWQIAMGRHWRLGEWFIRTFNAFSSGASWLGVSRPMPSDVRRAYVAPYNTWRNRISTIRFMQDIPLSPADKGWSLLERSAQALPSFADRPAFIAWGLRDICFDKHFLAGFRKALPQAEVTAFDDANHYVLEDKHEVLVPAIRAFLERNRL
>NZ_CP017188.1|WP_016849671.1|120473_120857_+|YkgJ-family-cysteine-cluster-protein
MAHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTEALRTHERAMRGTSQSQPRCIALDADIGRYSRCSIHDRRPSSCAAVPASLEFGQRSAQCDKSRLAHGLHALTDADWVGVDDAQRNPLPPV
>NZ_CP017188.1|WP_026006950.1|118489_120151_-|peptide-synthase
MTTLCNIAATLPQLARERPDQIAIRCPGGRGANGFAAYDVTLSYAELDARSDAIAAGLARHGIGRGARAVVMVRPSPEFFLLMFALFKAGAVPVLVDPGIDKRALKQCLDEAQPQAFIGIALAQLARRLLRWARSATQIVTVGGRYGWGGVTLARVERDGAGAGSQLADTAPDDVAAILFTSGSTGVPKGVVYRHRHFVGQIELLRNAFGMQPGGVDLPTFPPFALFDPALGLTSVIPDMDPTRPGSADPRKLHDAINRFGVTQLFGSPALMRVLADYGQPLPNVRLATSAGAPVPPDVVAKIRALLPADAQFWTPYGATECLPVAAIEGRTLDATRAATEAGAGTCVGHVVPPNQVRIIAIDDAAIADWSGVRELATGEVGEITVAGPTATDTYFNRDAATRIAKIRECCSDGSERVVHRMGDVGYVDAEGRLWFCGRKTHRVEAASGPLYTEQVEPVFNVHRQVRRTALVGVGAPGQQQPVLCVELQPGVSASAFAQVESDLRALGAAHPHTAGVTRFLRHSGFPVDIRHNAKIGRETLAVWAAQQLHKRG
>NZ_CP017188.1|WP_005912231.1|117248_118259_-|3-beta-hydroxysteroid-dehydrogenase
MKVLVTGGGGFLGQALCRGLRARGHEVVSFQRGDYPVLQRLGVGQIRGDLADPQAVRHAFAGIDAVFHNAAKAGAWGSYDSYHQANVVGTQNVIEACRANGVPRLIYTSTPSVTHRATNPVEGLGADEVPYGDDLRAAYAATKAIAERAVLAANDAQLATVALRPRLIWGPGDNHLLPRLAARARAGRLRMVGDGGNLVDSTYIDNAAQAHFDAFEHLAVGAACAGKAYFISNGEPLPMRELLNRLLAAVDAPAVTRSLSFNTAYRIGAVCETLWPLLRLPGEVPLTRFLVEQLCTPHWYSMEPARRDFGYVPRISIEEGLQRLRSSSSNDIAITR
>NZ_CP017188.1|WP_003468167.1|117025_117184_-|DUF1328-domain-containing-protein
MLHYAIIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
>NZ_CP017188.1|WP_005912258.1|115325_116429_+|D-alanine--D-alanine-ligase
MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPLLIGIDKQGQWHINNSDSFLLHADDPARIALHRSGRGVALLPGAHQQQVRPIQPEQALAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDAGLAVAPFACFNRHTAAMADVDALIAQLGLPLFVKPANQGSSVGVSQVRSADQFPAALALALAYDHKVLVEAAIAGREIECAVLGNAAPQASVCGEVVVHDAFYSYQTKYISEHGAEIVIPADIDARTQQRIQQIAVQAYQALDCAGMARVDVFLCADGRIVINEINTLPGFTRISMYPKLWQASGLDYRGLITRLIELALERHADDHLLRSAVQPH
>NZ_CP017188.1|WP_016849669.1|114487_115132_-|sterol-binding-protein
MPGSLFNSLKPLAGQALQAALNRALALDPDTRDALLPLEGQRIALTLEAPALALQIRVHERRLLVGPVDQAQEPDLAVRSSLAGLLGQLPFLANARRTGAPAGRLKVSGDAELARQLQQLAGRFDPDWQLPFVAVFGDILGVQIAGAVRAALQQARRSAVDLAQSAAEFVTEESRDVVPRAELEAFYDDVDELRDDVERLAARVSRLRASGGAA
>NZ_CP017188.1|WP_003488348.1|125623_126100_+|tRNA-(cytidine(34)-2'-O)-methyltransferase
MSAPVLDVILFQPEIPPNTGNVIRLCANTGARLHLIEPLGFDLSDKQLKRAGLDYHEYAPLQVHADLPSALAAIAPKRVFALSTRSTVRYDTPQFADGDAFLFGPETRGLPAEVLESIPPQHRLRLPMRPDNRSLNLSNTVAVMVFEAWRQWNFAGGQ
>NZ_CP017188.1|WP_016850613.1|126448_127678_-|MFS-transporter
MPMTRTRPRGTRALEALHFSVADVQDGLGPFLSVFLQSKGWSVAAIGTVMSVGGIAGMLATTPAGALVDATRRKRAVVVIGCLAILLATALIWLQPTSSGVVAAQIASALAAAGIGPALTGITLGLVHARGFDHQLARNQVANHAGNVLAAVLAGWLGWRYGFAAVFLLTAFFGALALVAVLAIPAAAIDHRAARGLASNDGGDALSGWRVLLTCRPLALLAVTLGLFHLGNAAMLPLYGMAIVAAHAGDPSALTATTIVVAQATMVVVALLAMRWIRVHGHWWVLLVAFMALPLRALVAASVIHGWGVFPVQILDGLGAGLQSVVVPALVARLLQGTGRVNVGQGAVMTVQGVGAALSPAFGGWLAHAFGYRIAFLTLGAIALLAVALWAGCRGMLQAGASVQAETML
>NZ_CP017188.1|WP_016850614.1|127770_128394_-|hypothetical-protein
MHWVDPDFLPATRGTLARFLLNPKADIDGLLLTDGTEVHTPPHLSEALLKALKPGSALTVRGLKPRDVEMLVALAIDPEGGKRILDEGPHGPHAKPKPKPKPPGKPPKPEVAQHSGTITRLLHGPHGQVHGVLLDDAVTVRFPPHAGGDFAKQLVVGKPLVAEGETKATPHGVLIHAHALGGKAATLKQIEHPPHGPAHKPKPKPKH
>NZ_CP017188.1|WP_029827832.1|128496_129249_-|hypothetical-protein
MMRQTVLAIALACTIGAAAAQVAAPPPPPAPNGPIGGPPAPPTPVAATPVSVSGTVERFLLNPNGDVDGLWLRDGTQVGFPPHLSSEVKAAVRAGDSVVVKGFRLGNLPVLQVSSIRSGRSGREVVDRPPTFGAAPPPPPTPGQLTPLQSDGTIQRLVYGPAGEINGALVSDGTVVRMPPHLALQFADLLRAGAPLSASGLGVATPDGRAIEATQLGRDRSSLRALFTAPRPDGPLPPPPPGTPVPPAGR
>NZ_CP017188.1|WP_016849537.1|129439_130786_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MARILIIDDDAAFRTTLQATLRSLGHTAVAAENGPDGLARLSEGGIDMAFVDFRMPGMDGIAVLRARLDDAQARQVPLVMLTAHVSSGNTIEAMTLGAFDHLVKPVGRADIVEVVERALLSRADAQAAATDALSAPVEDDDALVGHSPAMRTVHKRIGLAAASDLPVLITGETGTGKELAARALHRASPRASAPFVAVNCAAIPLELMESELFGHRKGAFSGASSDRRGLIREADGGTLFLDEIGDMPLPMQAKLLRFLQEGEVTPLGGSGPQKVDVRVLAATHRDLAACVADGRFRSDLRYRLNVVPIELPPLRERGQDILLLAQHFLSANAARAQSLSPAAQERLLAHRWPGNVRELRNVMQRSQVLVRGASIDAADLEEALGEAGEAPPNGASALTGTLPEAVAQLEKRMIQSALEQSQGNRAEAARRLGIHRQLLYRKLEEYGL
>NZ_CP017188.1|WP_016849538.1|130770_132213_-|sensor-histidine-kinase
MPRSLLRQLLLIWMVIVAACVGVATMLYGLYRQTEGVRLEEARQQLGGQCARIVQRYAGASEAARRGDDGAGLAAVVVQLVLADAPGVEGGVWDLHKGFVAYAYPTYDGSDHKTDIPAAEWANIVNAAQQSVTTKQAAQYRRDGRREVLLISACPLASGSAAWTMTRVPASKADAWRPLVVGMLLIFAMVAISAIALGVLVRRWSQRLQRIQQALAADTETPHIPPTGTPELDRLGAAVNDYAQRNAQALAQTRRLADELSRHERLAALGRMTATVAHEIRNPIATMRLALENEIARGDATPDDAAHGELMLGQIRRLDGVVESLLGMVQPIRLQLETVVVQDWLATLLEHGPLPPGTPPPRVLLPAAPLRWALDPQQLGRAVHNLLRNAAQHADPGSEVTLQAAAVEGMLQLQVCNRGAPIAEPIAAHLFEPFVSGRADGNGLGLALVREIARAHGGHARYAHADGLTHFILELPWRAS
>NZ_CP017188.1|WP_033483032.1|132262_133990_-|ubiquinone-dependent-pyruvate-dehydrogenase
MAKKRTLARFLAETLQSAGVERIWGVTGDSLNGLTDALREMQTIEWMHVRHEEVAAFAAGAEAAVTGQLAVCAGSCGPGNLHLINGLFDCHRSRQPVLAIAAHIPSSEIGLSYFQETHPQELFRECSHFVEMVTNPAQLPEVLHRAMRTAILQQGVAVVVIPGDIALLEVDKHVSSAWPALRQPRVLPAAEDVRQLAELLQQSKAVTLLCGSGCAGAHDAVVALADTLGAPVVHALRGKEYVEWDNPFDVGMTGLIGFSSGYHAMLNCDTLLMLGTDFPYRQFYPKDATIVQVDRDPSALGRRTPLQLGIAADVGETIAALLPQLQRREERGFLEKSLAHYRKAREGLDDLAVPADPGQPLHPQFVTRLISQIADQDAVFTCDVGTPTVWAARYLRMNGKRRLLGSFNHGSMANAMPQALGAQAAFPGRQVISLSGDGGFAMLMGDFISLAQLHLPVKVVVFNNASLGFVAMEMKAAGYLDTGTELRNPDFAAMSNAMGILGIRVDESSQLERALRQAFAHSGPALVDVRVATQELAVPPAIKLEQAKGMGLYLLKAVMSGRGDEVIALVKTNLR
>NZ_CP017188.1|WP_016849540.1|134200_134860_-|DNA-directed-RNA-polymerase-sigma-70-factor
MDGEALVAELWRRFKADHDLQARDFLVTEYSPWAKLVAADVYRRIGRGDLDWADHLQNAHVGMLEAMTRYDPSRAIPFTLYAKRRVRGAVFNGVRQQKRSSPVEDAIDVVADDIGGLESFIGSILEIATQHLVEHATDAWPGRHLAEEQARGILAQAMLQLAPRTREIFISHYYLHKPFVQIAGELGVTKGRVSQLHSQGLGILRTQLNERCFQRGDFL
>NZ_CP017188.1|WP_003488365.1|134866_135619_-|flagellar-biosynthetic-protein-FliP
MTRLHAGRRLLAGLAAVGLLVVATTACADPLGELMNAAGKQEFSSTLRVFVLMTMLSFIPVIVIGMTCFTRIIVVLALLRHALGIPQTPPNSVLITLAMLLTLFSMGPVLDKVQRDAVSPYLANQITATEAVSRATPALRDFMVRQTRESDLLAVTEMARAAPPRTVEDIRFTHLAAAFILSELKTAFQMGFVIFLPFLMIDLVVSAVLMALGIIMLPPATVSLPLKLLLFILIDGWVLVSRTLLGSIWS
>NZ_CP017188.1|WP_003488368.1|135615_135939_-|hypothetical-protein
MPSAIPYRSDTVLSAASLSPVLIWTTVLLAVLIAVLVWLKKKGVIARWQGGAQGAVAAGAIVKRSEYRVSRHTVVHLLEIEGERIVVAESRGQISLQRLGPTAGAST

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Crispr_ID: NZ_CP017188_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017188_2

407655-408009

Orphan

Consensus_repeat	Method
GATGCTGCCGTTGACCGTTTCCA	CRISPRCasFinder
GCCGTTGACCGTTTCCANG	CRT
GCCGTTGACCGTTTCCA	PILER-CR

6 spacers

The CRISPR arrays of NZ_CP017188_2

>merge|NZ_CP017188|2|407655-408009|CRISPRCasFinder,CRT,PILER-CR
GATGTCGCCATTGACCGTCTCGATGCCCTTGCCGAGCTCGGTTCCCACCAGCCCGATGCTGCCGTTGACCGTTTCCACGCCGCCACTGATCTGGCTGCCGCGCTCGGCGAGGATGCTGCCATTGACCGTTTCCAGCCCGCCGGACACCGTTACTTTCTGGCCCAGCGTGATCGAGCCGTTGACCGTTTCCACGCCACCGGTACGCGCGTTGTCGCCGATGCGGATGCCGCCGTTGACGGTTTCCACGTTCTTGGTTTGGGCACCGGCACCGATCTCGATGGAGCCGTTGACCGTTTCCAGGGCGCCATAGGTCTTGCCGGCATCTGCGCTGATCTTGCCGTTGACCTTGCTGACG

>NZ_CP017188|2|2|407655-408007|CRISPRCasFinder
GATGTCGCCATTGACCGTCTCGA	TGCCCTTGCCGAGCTCGGTTCCCACCAGCCC
GATGCTGCCGTTGACCGTTTCCA	CGCCGCCACTGATCTGGCTGCCGCGCTCGGCGAG
GATGCTGCCATTGACCGTTTCCA	GCCCGCCGGACACCGTTACTTTCTGGCCCAGCGT
GATCGAGCCGTTGACCGTTTCCA	CGCCACCGGTACGCGCGTTGTCGCCGATGCG
GATGCCGCCGTTGACGGTTTCCA	CGTTCTTGGTTTGGGCACCGGCACCGATCTC
GATGGAGCCGTTGACCGTTTCCA	GGGCGCCATAGGTCTTGCCGGCATCTGCGCT
GATCTTGCCGTTGACCTTGCTGA

>NZ_CP017188|2|1|407661-408009|CRT
GCCATTGACCGTCTCGATG	CCCTTGCCGAGCTCGGTTCCCACCAGCCCGATGCT
GCCGTTGACCGTTTCCACG	CCGCCACTGATCTGGCTGCCGCGCTCGGCGAGGATGCT
GCCATTGACCGTTTCCAGC	CCGCCGGACACCGTTACTTTCTGGCCCAGCGTGATCGA
GCCGTTGACCGTTTCCACG	CCACCGGTACGCGCGTTGTCGCCGATGCGGATGCC
GCCGTTGACGGTTTCCACG	TTCTTGGTTTGGGCACCGGCACCGATCTCGATGGA
GCCGTTGACCGTTTCCAGG	GCGCCATAGGTCTTGCCGGCATCTGCGCTGATCTT
GCCGTTGACCTTGCTGACG

>NZ_CP017188|2|1|407715-407953|PILER-CR
GCCGTTGACCGTTTCCA	CGCCGCCACTGATCTGGCTGCCGCGCTCGGCGAGGATGCT
GCCATTGACCGTTTCCA	GCCCGCCGGACACCGTTACTTTCTGGCCCAGCGTGATCGA
GCCGTTGACCGTTTCCA	CGCCACCGGTACGCGCGTTGTCGCCGATGCGGATGCC
GCCGTTGACGGTTTCCA	CGTTCTTGGTTTGGGCACCGGCACCGATCTCGATGGA
GCCGTTGACCGTTTCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017188.1\|WP_005927217.1\|415208_415910_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379309
NZ_CP017188.1\|WP_078537418.1\|408252_409470_+\|peptidase-M23	unknown	unknown	gnl\|CDD\|227278
NZ_CP017188.1\|WP_003482171.1\|412258_412579_-\|DUF1820-domain-containing-protein	unknown	unknown	gnl\|CDD\|370154
NZ_CP017188.1\|WP_016851500.1\|398442_399501_-\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186
NZ_CP017188.1\|WP_078585649.1\|399486_399693_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017188.1\|WP_003482133.1\|391242_391623_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|288556
NZ_CP017188.1\|WP_016851497.1\|401660_402713_+\|cellulase	unknown	unknown	gnl\|CDD\|365907
NZ_CP017188.1\|WP_016850463.1\|409574_411101_+\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|223864
NZ_CP017188.1\|WP_016849428.1\|413598_414939_+\|membrane-protein	unknown	unknown	gnl\|CDD\|367457
NZ_CP017188.1\|WP_029827782.1\|411266_412259_-\|3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240646
NZ_CP017188.1\|WP_078585650.1\|404793_405222_+\|peptidase-propeptide-and-ypeb-domain-containing-protein	unknown	unknown	gnl\|CDD\|379323
NZ_CP017188.1\|WP_016851494.1\|403352_404486_+\|cellulase	unknown	unknown	gnl\|CDD\|365907
NZ_CP017188.1\|WP_005912457.1\|417435_418026_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274398
NZ_CP017188.1\|WP_005912472.1\|405459_407256_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349910
NZ_CP017188.1\|WP_029827786.1\|391825_396298_+\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968
NZ_CP017188.1\|WP_016849427.1\|416097_417225_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
NZ_CP017188.1\|WP_003482140.1\|399808_400882_+\|cellulase	unknown	unknown	gnl\|CDD\|365907
NZ_CP017188.1\|WP_003482177.1\|412687_413380_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759
NZ_CP017188.1\|WP_005912453.1\|419116_420577_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_CP017188.1\|WP_016851501.1\|396426_397908_+\|glutamate-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|273553

Protein	Function_ID	Function_description	E-value
NZ_CP017188.1\|WP_005927217.1\|415208_415910_+\|hypothetical-protein	gnl\|CDD\|379309	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily. This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily.	1.29017e-07
NZ_CP017188.1\|WP_078537418.1\|408252_409470_+\|peptidase-M23	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	9.32861e-90
NZ_CP017188.1\|WP_003482171.1\|412258_412579_-\|DUF1820-domain-containing-protein	gnl\|CDD\|370154	pfam08850, DUF1820, Domain of unknown function (DUF1820). This family includes small functionally uncharacterized proteins around 100 amino acids in length.	1.29038e-51
NZ_CP017188.1\|WP_003482140.1\|399808_400882_+\|cellulase	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	8.53846e-61
NZ_CP017188.1\|WP_016851500.1\|398442_399501_-\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP017188.1\|WP_016850463.1\|409574_411101_+\|PDZ-domain-containing-protein	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.85747e-128
NZ_CP017188.1\|WP_016851497.1\|401660_402713_+\|cellulase	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.21893e-58
NZ_CP017188.1\|WP_003482133.1\|391242_391623_+\|hypothetical-protein	gnl\|CDD\|288556	pfam11720, Inhibitor_I78, Peptidase inhibitor I78 family. This family includes Aspergillus elastase inhibitor and belongs to MEROPS peptidase inhibitor family I78.	1.31074e-19
NZ_CP017188.1\|WP_016849428.1\|413598_414939_+\|membrane-protein	gnl\|CDD\|367457	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX). This family includes TodX from Pseudomonas putida F1 and TbuX from Ralstonia pickettii PKO1. These are membrane proteins of uncertain function that are involved in toluene catabolism. Related proteins involved in the degradation of similar aromatic hydrocarbons are also in this family, such as CymD. This family also includes FadL involved in translocation of long-chain fatty acids across the outer membrane. It is also a receptor for the bacteriophage T2.	7.3358e-134
NZ_CP017188.1\|WP_029827782.1\|411266_412259_-\|3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240646	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases. Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric.	1.17291e-144
NZ_CP017188.1\|WP_078585650.1\|404793_405222_+\|peptidase-propeptide-and-ypeb-domain-containing-protein	gnl\|CDD\|379323	pfam13670, PepSY_2, Peptidase propeptide and YPEB domain. This region is likely to have a protease inhibitory function (personal obs:C Yeats). The name is derived from Peptidase & Bacillus subtilis YPEB.	4.4991e-05
NZ_CP017188.1\|WP_016851494.1\|403352_404486_+\|cellulase	gnl\|CDD\|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.41079e-59
NZ_CP017188.1\|WP_005912457.1\|417435_418026_-\|hypothetical-protein	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	0.00183523
NZ_CP017188.1\|WP_005912472.1\|405459_407256_-\|hypothetical-protein	gnl\|CDD\|349910	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions. This subfamily is composed of uncharacterized proteins containing a protease-associated (PA) domain insert which may participate in substrate binding and/or promote conformational changes, influencing the stability and accessibility of the site to substrate.	1.52694e-122
NZ_CP017188.1\|WP_029827786.1\|391825_396298_+\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NZ_CP017188.1\|WP_016849427.1\|416097_417225_+\|radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	2.76412e-22
NZ_CP017188.1\|WP_003482177.1\|412687_413380_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	1.19314e-25
NZ_CP017188.1\|WP_005912453.1\|419116_420577_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	4.62895e-152
NZ_CP017188.1\|WP_016851501.1\|396426_397908_+\|glutamate-synthase-subunit-beta	gnl\|CDD\|273553	TIGR01318, glutamate_synthase_small_subunit_gltD, glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.	0

>NZ_CP017188.1|WP_005912472.1|405459_407256_-|hypothetical-protein
MPRKILLCLAATLALAGCKREPADAPSAPAAQTPTDSAPSAPVSRHTFSPDMTTGDFAELVKTLASDDFEGRGPGTPGEEKTVTYIRDQMQRIGLQPGNGDSWFQEVPMVETTADASTAPSLRSGEQTRTLAFGTDIVVGTRTGQAEVKLDNSELVFVGYGVDAPEQQWNDYAGQEWKGKTVVMFVNDPGFHTDDAKLFDGKRMTYYGRWTYKFEEAARKGAAAALIVHDTPGASYGWDVVKNSWSGPQYDLPAKDDPDPRLPVQGWISAETARQLFANAGLDLTQAYKDASKRGFKPVPLKASWSVDLKSTIAAKTSRNVVGVLPGTSHADEAVLYMAHWDHLGKHPGERGDNIYNGAVDNATGVAGILEIADAFAHQDPKPTRSVVFLAVTLEESGLLGSKYYVANPSFPLDKIAAVINLDAMSVAGRARDVTVVGMGSSELEDILKPIAAMQGRTLHAEATPQSGSYFRSDHFNFAKAGVPALYADGGEDLREGGTAAGRAAAEDYGRHRYHAPGDEYDAATWKLDGTIEDLQVVYGVGKEVAAGERWPNWYPGNPFKAARDRMMAGRPGTSAASAQPADATSRATQTNMAKPPR
>NZ_CP017188.1|WP_078585650.1|404793_405222_+|peptidase-propeptide-and-ypeb-domain-containing-protein
MKTALIGVLALVSQGALAQAADKPAKALTSGEVTSMLTAKGYTKVHDLKFEHGVWTADARSGDGKDVDVRIDPVTGRVYGDQTTSKLSEADVRASLSTGGYADVHDLKFNDGLWKADAKRNGQKVELHVDPEDGHVVSVEND
>NZ_CP017188.1|WP_016851494.1|403352_404486_+|cellulase
MSAVCFSLRALLRSTLLFIVFGSLPLAHAQTRALTYAGVNLSGAEFASSKKPGVLNKDYMYAAASDYTYFAGVGMNTIRLPILWERLQPTASGELDPAQLALLQQAVARAKAAGMYLVIDIHNYAKYYGYKIGSPEVPVATFTDLWRRLALAFNSDNVVMFGLMNEPNNISASEWAGAAQAAIDAIRRTGANNLILVPGALWTGAHSWYSTTNDGYSNATALTSIYDPLDRYAFEVHQYLDADSSGTSSTCVSSTIGAERLRNFTQWLRTNRKRGFLAEFGTANNAVCNQALQGMLAYMETNADVWLGWTWWAAGSWWNLSYAYSVHPNKDGTDKPQMAILSPQAALATRAPVAAAAARTSAASTSATSTSVARTAR
>NZ_CP017188.1|WP_016851497.1|401660_402713_+|cellulase
MKSLTTHTRRLRCRALSFLLLAAMPLAQAQSATGLKYAGVNLSGAEIKSSQKPGVLDIDYRYPAADEYAYFAGKHINTVRLPILWERLQPKTGGELDPAQLALIRQAVANAKAAKMYVIVDVHNYAKYYGYTIGSTKVPISTFNDLWRRLAIAFKSDNAVIFGLMNEPYDIDPQAWATAAQASIDTIRKTGATNLILVPGALWTGAHSWYSTVAGQSNAVAMASIRDPLNRYAIEAHQYLDADSSGTSGGCVSATVGVERLRSFTEWLRLNKKRGFLAEFGTGNTVTCNLALNGMLGYMESNSDVWMGWSWWAAGAWWSGAYPFNVQPDAQGRDKPQMSILSPRARRITD
>NZ_CP017188.1|WP_003482140.1|399808_400882_+|cellulase
MFRTPPHFPRLRIAALALTLLAAGPLAQAKEPPGPRRETAGLKYVGVNLSGAEFNSRKKPGTLFKDYTYPAASDFSYFAGKGMNTIRLPFLWERVQPELNGPLDQAQLGLIKKSLEAAKANKQYLILDLHNYATYSGKRIGTSDVPAGALADLWRRLALEFKDDKAVIFGLMNEPNGISAPDWANAAQGTITAIRKTGAKNLILVPGTAYTGAHSWRSTSYGVSNAKALEILKDPGNNLAFEAHQYLDKDYSGTKPVCTSDSVGQEKLQGFTSWLRENKQKGFLGEFATANNPVCDKALEGMLTYMEKNSDVWLGWTWWAAGAWWKPDYPFTVQPGKDGSDKPQMAILSKYARRAGK
>NZ_CP017188.1|WP_078585649.1|399486_399693_+|hypothetical-protein
MGCAHGKTPGCCVVGKLRQQRKRRIASLKRADVALLRQCVLPGLLRTRAHPHDAPCACSQAVKSGPCA
>NZ_CP017188.1|WP_016851500.1|398442_399501_-|NAD(P)-dependent-alcohol-dehydrogenase
MSTAHAYAAQAADQPLAPFVFERRAPGLNDVQIDIAYCGVCHSDLHTARNEWHNTLYPSVPGHEIVGRVTAVGNAVTGFKVGDLAGVGCMVDSCRSCASCQEGEEQYCEAGFTGTYNGPMFGGGENTYGGYSDHIVVDQKYVLRITHSDNLAAVAPLLCAGITTYSPLAHWKVGPGQKVGVVGLGGLGHMAVKIAKAMGATVVLFTTSESKRADALRLGASEVVISKDEAQMAAQYNTLDFILNTVAAPHNLDPFLNALKRDGAMVLVGVPEQSHPSPAVFNLVMKRRTLAGSLIGGIRQTQEMLDFCAKHNIVSDIETIRADQINEAYERMLKSDVKYRFVIDMATLDKAA
>NZ_CP017188.1|WP_016851501.1|396426_397908_+|glutamate-synthase-subunit-beta
MSRKQAFQFLDLPRTMPTRIPVELRTSGDWGELYGRFDKADAQYQAGRCLDCGNPYCSWKCPVHNAIPQWLQLVQEDRIIEAAALCHSTNPLPEVCGRVCPQDRLCEGSCTLEEFGAVTIGAVEKYIVDTAFKMGWRPDLGNVQASGHRVAVIGAGPAGLACADRLARAGIEAVVYDRYEQIGGLLQFGIPSFKLDKSVIGKRREILEGMGVQFRLGVEVGRDISIEQLLGEYDAVFLGTGAYRYTDGGLPGQDLKNVLPALPFLVQNSRIVSGNDPHGRPIAGWEDQLALPDLTGKRVVVLGGGDTGMDCVRSAIRLGAAKVTCAYRRDEASMPGSAREVANAREEGVRFLFNRQPLSIESGADDEAIGVTVVETKLGEPDASGRRNAVPVEGSESLLEADVVIIAFGFSPTLPDWLASQGVDAGGNGRIVAPSDGNGRLPYQTSNPRLFAGGDCVRGADLVVTAVAEGRDAAGSIVQLLGVKAQVKEPAAA
>NZ_CP017188.1|WP_029827786.1|391825_396298_+|glutamate-synthase-large-subunit
MAPRTRQGLNDDGLYNSVRDERDACGFGMVAQLDDQPSRALVDTAIAALSRMTHRGGVAADGLTGDGCGLLIRKPDAFLRGLARDAGITLGTRYAAGVVFLPLDEADAARCRAELEAQLHNAGVHFRGWRVVPTDDSVCGQLARDTLPRIEQVFVDAGAEQTEDGFTLALFLARRRAEQALHAVEHFYVTTLSPNGISYKGMVLPDKLSTFYPDLQRSDLSSSAIVFHQRFSTNTLPRWPLAHPFRLLAHNGEINTIEGNRRWAQARSKVWQTPRFDIAQFDPVISMHGSDSQSLDNMLELLIAGGMDLLQALRILVPPATQSLEFKDADLAAFYEFYGLNTEPWDGPAGIVACDSRYAACMLDRNGLRPARWMLTSDRHFLVASEAGVWELPAERITRKGKLGPGEMMAIDLKRGDLLDSDAIDRINRARAPYKQWLQQGVTYLQTELIDPSLVEEPFSEQTLRSYHKLFQLSTEEVEQVLRPLAETEQEATGSMGDDTPMAVLSRQTRPLYDYFRQAFAQVTNPPIDPLREGIAMSLTTQLGRETNIFHAGAETVNHVILNSPVLSQRKLRQLLKMEQYVERNRLIDLSYSLEEGLKAGLERICQEVEAAARAGAVMLLLSDRYPVPDRPMAHALLATGAVHHHLCKVGLRCDVNLIIETGTARDPHHMACLLGVGATAVYPYLAYQTLFDLGRRGILQLSKGGEQSQIGRRYRKGIYKGLSKIISKMGICTIASYRGAQLFEIVGLDPDVVDLCFADTPARIGGVDLARLDTEARELTVRAWNDQLKPEVGGLLKYVHGGEYHMYNPDVVMTLQRATRTGDAGDWQKYVAAVHARPASTLRDLVQLKRAHTPTPLDDVAPAEDVLRRFDSAAISLGALSPEAHEALAIAMNRLGGRSNSGEGGEDPARYGTEKRSKIKQVASGRFGVTPEYLVNAEVLQIKVAQGAKPGEGGQLPGHKVNELIARLRYAKPGIGLISPPPHHDIYSIEDLAQLIYDLKQVNPTALVSVKLVAHAGVGTIAAGVVKAGADLITVSGHDGGTGASPVSSIRYAGVPWELGVAESHQALVANDLRERTILQTDGGLKTGLDVVKAALLGADSFGFGTAPMIVLGCKYLRICHLNNCATGVATQDERLRAGYFTGLPERVEHFFRLLAEEVRQWLSYLGVRSLDEIVGRTDLLEQLDVSPRPGVKVDLSRLLTHAQYDGSHCAAQRLYESPDSLATQMDGLLADAIANKSGGDHRFLIHNTDRSIGARLSGAIARAHGNHGMSDAPLNLRFRGTAGQSFGAFNAGGLQLELEGEANDYVGKGMAGGRLVVRPPRGARFEARNTPIVGNTCLYGATGGELFAAGRAGERFAVRNSGALAVVEGAGDHCCEYMTDGVVLVLGKVGLNFGAGFTGGLAYVLDIERDFVDRYNHELIDIHRVSAEGFENHRQHLHTLISRHRELTGSIWAQQILDEFRDYIGKFWLVKPKAASIESLTESLRRAA
>NZ_CP017188.1|WP_003482133.1|391242_391623_+|hypothetical-protein
MRAVLPIARLACTLVVLTALTACNKPQPDEQEAVTAKAQHAAEQASAPAPDAAPEAPPIGSCDATQVQSLVGQPLTDAVGEQARSDAGAKSVRVLKPGQMTTMEFNGERLNLEVDAKNVISSVRCG
>NZ_CP017188.1|WP_078537418.1|408252_409470_+|peptidase-M23
MLACTLLGSMGASAQSQRETERKLQQLRDELKTISADRRELEGKRGTAAQQLRQADEKVAKTARALSETEAAMRAQEQHLSTLQQERAQLQRGLQNQRAQLAALLRAADQVGRNAPLKVLLSQDTVGDAARMLADHRYVQNARAQRIHALTTQLDALATVEQDIATRRQALDAARAQQKAQAATLQKDRSQQAATVAQLDDRYKQRAEREKAIGQDAKALEQLLANLRAAAAKAEAERRAAARRAAAEAAAQAKRSKTERSDRPGKTPPKVVANAPAPKVGGLSWPVAGNLLARFNATLPDGHTSKGVLIGAPKGTTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGATIKRGDAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
>NZ_CP017188.1|WP_016850463.1|409574_411101_+|PDZ-domain-containing-protein
MRVAVLSVALSLALFASPGWAQKAGPAAAQASADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGIRAGDVIVAIDGKPIDASKAMEPLRGESGSKVVLTIMRDKTPKPFDVTLQRETIRVASVRSKLLEPGFGYIRISTFQADTGADFQKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLNGAPVVVLVDAGSASASEVLAGALRDNKRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPDVLLTPEPQPGDADVPASLTDYSEATLPGHLRGDDEGEEGYSAGDVLPGDGPITEALAELKQPGAAAKAQAARKAKAQAAQKAKAANKTGAEPKPAAARPATTDKPRSAEPAGKAKPATTPPAPAEPVQPTTPTDKPAEPVN
>NZ_CP017188.1|WP_029827782.1|411266_412259_-|3-phosphoglycerate-dehydrogenase
MRIVVPDDYQGAVAQLPCLQQLQGHQVQVLGALDAELDARAACLADADALVLIRERTRVDAALLQRLPRLKLISQTGRVGAHVDVAACTALGVAVAEGVGSPVAPAELTWALILSASRRLTDYQHALQQGRWQALGDPGLGRVLHGRTLGIWSYGRIGQRVAGFGRAFGMQVVVWGGEASCAQAARDGFAVAGSREDLFERSDVLSLHRRLTAQTRHDVTAQDLARMRADALLVNTSRAELIAPGALLAALDAGRPAQAALDVFEHEPVLDPRDPLLRHARVLATPHLGYVERDSYALYFDAAFDNVLAFAAGTPRNLVNPEVLATTQRV
>NZ_CP017188.1|WP_003482171.1|412258_412579_-|DUF1820-domain-containing-protein
MSKSLYKVTFLNHGKVYELYAREVTGSHLWGFNQIGELVFDVHDGLVVDPTEERLREEFGNTRTLHLPMQSIVRIEEVEKKGQSVIRDATTGDKVVTPFPSPIKPR
>NZ_CP017188.1|WP_003482177.1|412687_413380_-|rhomboid-family-intramembrane-serine-protease
MFVSLPSRKKPTPRWAVPLLFATVWLAYLWSISRPGEARNTLWLDWGALSSGVSNLGDWWATLRDGSVLRLFTALFLHADWSHLLGNLVFLLIFGLPAERILGPWRLLLLFLVGGAASNLAAIFAIGTPDRVIIGASGAVSALIGTYLALFPGAKLGVVLPLGVFLEFIRVPAPLLIGAWALLQVVFAYIGPAFGMVAWSAHIAGFVFGIVYGLYVRAAIARRLRKRHGF
>NZ_CP017188.1|WP_016849428.1|413598_414939_+|membrane-protein
MSTASTLSRATLLAVGIAGVLAVGQAHGAAFQLKENSAKGLGRAFAGSGSAPDDASIIATNPAGMRQLDGRLFQADVSAISFSAKFQPDTAAYANGAPVSGGNGGDAGMIAPVPAMYFHVPFGENDNMHLGTSLTVPFGFKTEYDRDWVGRYHGTKTELQAIDFNVAFSYDVNPYVSFGASVFAERLDIDLANAVDFGSVLAARRVPGFAPGSADGYSRIKGDSTEVGFTLGGLFSIDENTHIGFSYRSQVEHKITDGTADFTVPGSAAAVLSVAAPGTFVDTKGRATVKLPASATASFTHNVNEQWSIMADVTRTAWSKFDQVTVDFASNQPDSVLDFSYRDTTFASIGADYRLSDTVILRGGLAYDQTPTTAEHRDVRVPDASRKWVSLGMSWRPSAQTEYNFGYTHLFTSDPTSDTRSATGDRLAGSYDVKGDVLAASINYKF
>NZ_CP017188.1|WP_005927217.1|415208_415910_+|hypothetical-protein
MSQPDFIQITDNAIAHEDCVAIVQRMRQSQQLHPGRIGGGVFPDLKHSRDLRISGMAEWAEVENRLQQAVFEGVLTYLRQYPQALISPLMLQVTTADGRPHRLVAEDIVQMSDQALGDLARTCLRPGAINLQWYTADQGGYPYWHCELYPRDANADTLHRHLLWTLYLNDDFAQGETEFLFQQRKARPRTGSLLIAPTAFTHTHRGNRPVGGDKFIATSWILFQSAQALYGGE
>NZ_CP017188.1|WP_016849427.1|416097_417225_+|radical-SAM-protein
MQKNSFPSASAAAERDVRSSRTVIKGRGTTAYVPGRFSVTTAVEIDDGWGALDADGETAMRPKTVVAEEIARSIISRNNSPDIGFSQSVNPYRGCEHGCVYCFARPSHAYLDLSPGLDFETRIFAKPNAAALLRAEIARPSYQCSPIALGINTDAYQPAERRLRISRQCLEVLGEARHPVSFVTKAALIERDIDVLAEMAQHNLVSVYFSVTTLDNRLAAKMEPRAAAPHARLRAMQALHAAAVPVGVLVAPVIPMINDKELERILDAAAAHGARSAGYVLLRLPHELTQLWREWLELHYPDRAKHVMSLVQQMRGGKDYDSRFGKRMVGEGPFAELIAQRFSIAYRRLGFGRLPRLDTTHFRPPRPDTPQLNLF
>NZ_CP017188.1|WP_005912457.1|417435_418026_-|hypothetical-protein
MRTFRIRGRRLGLRFRETVLLAGTLACSVLFVATQRQIGLLCYAVAPILLLAFFVLQADLVWRGHKTAGAAFIMAVAAWLTFSVLATYAFSGLVHTHNFLGTWLKALLGAGFFAVLFSLSVLLARKRSVSLYWYLAGSLAVVIAVAAVHPENSGDITVNCERGSCAAGIIAFWPGAFQAADGKRPISVVLPHSGGD
>NZ_CP017188.1|WP_005912453.1|419116_420577_+|cardiolipin-synthase
MLALAQGAWEWLATIPHLEALLLAAYVLYLLWIAGWIVLQKREPVATLSWVLSLAALPYLGLLIYYWLGPQKVKRQRLRRGRSRSGMESYSSVCPPDADCTELAKIAQSTTGLAPSSATEVHWLVDGAATYAAIIEAIRGARDHIHLEYYIFQPDHSGTAICAALMERARAGVKVRLLMDAIGSSAMTRRALRTLREAGVETAWFHPSQLLKPFKRPWLNLRTHRKVIVIDGRIGFTGGINVTDDENEQVRKQAYRDLHVRLQGHVVRSLQLVFLEDWLYATSQGRAAFHGQQLWPDDMPTRAQGTVDAQVLVSGPDSSWEAIHRLMVAAIHEAKHRVWLVTPYFVPGEAARMALTSAALGGLDVRLLVPRVSDSRLVTYAARSYFDELLEAGVRIYEYGPRMLHTKALLADDDVCIVGSANFDSRSFRLNFELSMLFRDQAVAAEMAGLIGTDLQQAQEVQFARHRPLWRSRLPEAFARLLSPLL

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Crispr_ID: NZ_CP017188_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017188_3

481283-481358

Orphan

Consensus_repeat	Method
TTCGTAGGAGCGGCCCTGGCCGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017188_3

>merge|NZ_CP017188|3|481283-481358|CRISPRCasFinder
TTCGTAGGAGCGGCCCTGGCCGCGAGCGAGTCGTCCGACGCCACATCGGCTTCTGTAGGAGCGGCCCTGGCCGCGA

>NZ_CP017188|3|3|481283-481358|CRISPRCasFinder
TTCGTAGGAGCGGCCCTGGCCGCGA	GCGAGTCGTCCGACGCCACATCGGCT
TCTGTAGGAGCGGCCCTGGCCGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017188.1\|WP_016848857.1\|473696_474359_-\|organic-solvent-ABC-transporter	unknown	unknown	gnl\|CDD\|225410
NZ_CP017188.1\|WP_033483042.1\|470589_470970_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017188.1\|WP_003482333.1\|491293_491626_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017188.1\|WP_029829718.1\|472350_473406_-\|VacJ-family-lipoprotein	unknown	unknown	gnl\|CDD\|225409
NZ_CP017188.1\|WP_005912356.1\|488922_489021_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017188.1\|WP_005912377.1\|474355_474901_-\|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD	unknown	unknown	gnl\|CDD\|275223
NZ_CP017188.1\|WP_016850440.1\|471123_471675_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207
NZ_CP017188.1\|WP_003482308.1\|474912_475662_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223838
NZ_CP017188.1\|WP_029829712.1\|489169_491095_-\|aminopeptidase-precursor	unknown	unknown	gnl\|CDD\|226483
NZ_CP017188.1\|WP_033483043.1\|501050_501947_+\|pseudouridylate-synthase	unknown	unknown	gnl\|CDD\|211332
NZ_CP017188.1\|WP_026006798.1\|473416_473707_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225655
NZ_CP017188.1\|WP_078518009.1\|485229_486864_+\|exodeoxyribonuclease-V-subunit-alpha	unknown	unknown	gnl\|CDD\|273631
NZ_CP017188.1\|WP_016848858.1\|475661_476456_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224052
NZ_CP017188.1\|WP_016849224.1\|492755_494555_+\|allophanate-hydrolase	unknown	unknown	gnl\|CDD\|236177
NZ_CP017188.1\|WP_029829717.1\|477626_481031_+\|exodeoxyribonuclease-V-subunit-gamma	unknown	unknown	gnl\|CDD\|273633
NZ_CP017188.1\|WP_016849225.1\|494638_498286_+\|urea-carboxylase	unknown	unknown	gnl\|CDD\|274264
NZ_CP017188.1\|WP_016849227.1\|499136_500714_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275057
NZ_CP017188.1\|WP_016850439.1\|471703_472213_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_CP017188.1\|WP_004429260.1\|500838_501018_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017188.1\|WP_033483028.1\|487653_488820_+\|nucleoside-hydrolase	unknown	unknown	gnl\|CDD\|239118

Protein	Function_ID	Function_description	E-value
NZ_CP017188.1\|WP_016848857.1\|473696_474359_-\|organic-solvent-ABC-transporter	gnl\|CDD\|225410	COG2854, Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component [Secondary metabolites biosynthesis, transport, and catabolism].	2.12519e-50
NZ_CP017188.1\|WP_016849225.1\|494638_498286_+\|urea-carboxylase	gnl\|CDD\|274264	TIGR02712, Includes:_Allophanate_hydrolase, urea carboxylase. Members of this family are ATP-dependent urea carboxylase, including characterized members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae. The allophanate hydrolase domain of the yeast enzyme is not included in this model and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from Oleomonas sagaranensis was shown to be highly active on acetamide and formamide as well as urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP017188.1\|WP_029829718.1\|472350_473406_-\|VacJ-family-lipoprotein	gnl\|CDD\|225409	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane].	4.51369e-101
NZ_CP017188.1\|WP_005912377.1\|474355_474901_-\|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD	gnl\|CDD\|275223	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD. Members of this protein family are the MlaD (maintenance of Lipid Asymmetry D) protein of an ABC transport system that seems to remove phospholipid from the outer leaflet of the Gram-negative bacterial outer membrane (OM), leaving only lipopolysaccharide in the outer leaflet. The Mla locus has long been associated with toluene tolerance, consistent with the proposed role in retrograde transport of phospholipid and therefore with maintaining the integrity of the OM as a protective barrier.	7.61801e-63
NZ_CP017188.1\|WP_016850440.1\|471123_471675_+\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	5.66269e-83
NZ_CP017188.1\|WP_003482308.1\|474912_475662_-\|ABC-transporter-permease	gnl\|CDD\|223838	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	1.82887e-81
NZ_CP017188.1\|WP_029829712.1\|489169_491095_-\|aminopeptidase-precursor	gnl\|CDD\|226483	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only].	6.48557e-66
NZ_CP017188.1\|WP_033483043.1\|501050_501947_+\|pseudouridylate-synthase	gnl\|CDD\|211332	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family. This group is comprised of bacterial proteins assigned to the RluA family of pseudouridine synthases. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. The RluA family is comprised of proteins related to Escherichia coli RluA.	3.09301e-127
NZ_CP017188.1\|WP_026006798.1\|473416_473707_-\|STAS-domain-containing-protein	gnl\|CDD\|225655	COG3113, COG3113, Predicted NTP binding protein (contains STAS domain) [General function prediction only].	2.74874e-12
NZ_CP017188.1\|WP_078518009.1\|485229_486864_+\|exodeoxyribonuclease-V-subunit-alpha	gnl\|CDD\|273631	TIGR01447, recD, exodeoxyribonuclease V, alpha subunit. This family describes the exodeoxyribonuclease V alpha subunit, RecD. RecD is part of a RecBCD complex. A related family in the Gram-positive bacteria separates in a phylogenetic tree, has an additional N-terminal extension of about 200 residues, and is not supported as a member of a RecBCD complex by neighboring genes. The related family is consequently described by a different model. [DNA metabolism, DNA replication, recombination, and repair].	3.92874e-153
NZ_CP017188.1\|WP_016848858.1\|475661_476456_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224052	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism].	9.41597e-122
NZ_CP017188.1\|WP_016849224.1\|492755_494555_+\|allophanate-hydrolase	gnl\|CDD\|236177	PRK08186, PRK08186, allophanate hydrolase; Provisional.	0
NZ_CP017188.1\|WP_029829717.1\|477626_481031_+\|exodeoxyribonuclease-V-subunit-gamma	gnl\|CDD\|273633	TIGR01450, recC, exodeoxyribonuclease V, gamma subunit. This model describes the gamma subunit of exodeoxyribonuclease V. Species containing this protein should also have the alpha (TIGR01447) and beta (TIGR00609) subunits. Candidates from Borrelia and from the Chlamydias differ dramatically and score between trusted and noise cutoffs. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP017188.1\|WP_016849227.1\|499136_500714_-\|hypothetical-protein	gnl\|CDD\|275057	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A. Members of this protein family are found, so far, exclusively in the genus Acinetobacter. Members average just over 600 amino acids in length, including a 22-amino acid C-terminal putative protein sorting recognition sequence, GlyGly-CTERM (TIGR03501). The GlyGly-CTERM signal always co-occurs with a subfamily of the rhomboid family intramembrane serine proteases called rhombosortase (TIGR03902). Members occur paired with a second rhombosortase target, with which it also shares an N-terminal motif CSLREA. This protein is designated Acinetobacter rhombotarget A (rbtA).	3.27046e-05
NZ_CP017188.1\|WP_016850439.1\|471703_472213_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	2.08881e-11
NZ_CP017188.1\|WP_033483028.1\|487653_488820_+\|nucleoside-hydrolase	gnl\|CDD\|239118	cd02652, nuc_hydro_2, NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. .	8.64622e-49

>NZ_CP017188.1|WP_029829717.1|477626_481031_+|exodeoxyribonuclease-V-subunit-gamma
MHATSAPDFRLYPSNALDTLAALLAQELRRPMPGQPLLQPEVVLIPQVAMRRWLQSTLAAEHGVAANLEFLTPGEFVARALERNLGAADDDLDMATTQWRLYAALQSDLGSDAALAPLAGYLSDGDALKPWALAGELGSVFEKYQAWRRDWLLRWEAGADPDDPQARLWRSIAAGRQYRARRIGQYLDRYARADGPLPQGLPPRVFAFAILNISPDVLRVLATQARVGTLHFYLPTPTQGYWGDLQTLRQRRREDGAVQLFAEQVQENPLLQAWGAAGRDFMALVGDYEVVHPLAEIAAYADPLDSGRRTLAAGGLGDSLLRRMQSDLFHRRGPAADARLPAVNLHDPSLQVHACHTRLRELQVLHDQLRALLDDARFDPPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASEPLAEVFLALLGLPIARFGLHEILDLLASAPIAEAAGLDEAGLERLRNWLHAAGARWGLDAAHRRQHQAPGDDAYTWRFALDRLLLGHASGADEDIDGVAPWPQLEGSALAALDTLLRLLRVLERHQAALADAMTPVEWRERLLGLLEALIPATPTAPRAQRALDRLRTLIDQFARDAVRAEYAGKVPAEVVRAHFAAVLGDSDTRAPLLTGGISFGRMVPMRLLPFRVICLLGMNDGDFPRRDPAAGLNRLTAELGTERRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGADARDGSVREPSVLISELLASAAQYHAASNALDTLVVRHPLQPFAAAAFGALGDDGADPRRFSYRRQWRPAVDSLVGQRQPLAPWVAGALPAEEIALPASMSIDALRRLLTDPAGQFLRHRLGMRLPDPAGEDSDLEPLLAPTRGLDHYGLQQQVFEAALAGDTEGLYERLRARALLPSGPLGRRQLDERVAQLRPYADAFRQWRGESPAQSRRLQVQIGEIELHGRVPGWYASGVGRVQVGALSGRSAIRHGLEWLLLRAAGEHAPYVRFFEHDDGLGPHPIDAQPLSQTQAHTALAELLQLYRQGVQTPLAFAPYSSWKYHQAARGGDLDKAIKEAAGQWQSGFGWSESHSPELRLVTRGRDPFADAQRFAAFATTSHRVYALLEQGNTGAPLETERVIDSWRHWHGAREDAE
>NZ_CP017188.1|WP_016848858.1|475661_476456_-|ABC-transporter-ATP-binding-protein
MTASASPVVQLSGVRIDRGGRTILRDVSLEVPRGSITAVLGPSGSGKSTLLAALTGELRPAAGAVTLFGNPIPTGSRALLEMRRNVGVLLQGNGLLTDLSVAENVALPLRTHTRLPAAVLQRLVQMKLHAVGLLAAADAWPRELSGGMARRVALARALALDPPLMIYDEPLTGLDPIASGVIMSLIQRLNDSLGLTSIIVSHHVHETLPICEQAVVIANGGIVFAGTPAQLQDSTDPLVQQFLHGQPDGPIAFDAAPRRDRSAA
>NZ_CP017188.1|WP_003482308.1|474912_475662_-|ABC-transporter-permease
MAFADSIRAFGRAGLFSLTVLRGSLPTRDFIAELVREIYKVGARSLPIIAVGGAFVGLVLTLQGYRTLTTYGASDALSTLLGLSLYRELAPVLTALLFIGRAGSSIAAELGLMRATDQIKALELMAIDPVAKAVAPRFWAAVLTVPLLTGVFCSLAITGGYFEAVHVLGIDNGTFWSGLSNSVDFWDDFGVAMLKSAIFGGTAALVAAYVGFHAEPTIEGTSVATTRAVVNASLLVLMFNFVLSAMLFR
>NZ_CP017188.1|WP_005912377.1|474355_474901_-|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD
MAMRGPRLEFAVGAFLLLTLASLLVLAVASTNQRWGFGSSQYTLTARFSQIGQLRAQAPVKIGGVTIGKVADISLDPTKFDSIVTLSLDTKYKDLPADTSAGIFTSGLLGESYIGLQPGGDPDTLKPGDEIGFTQPAVDLLQLVGKYMFSGGGGGSNAPAAANGQAPAPAQTAPPSTEPHQ
>NZ_CP017188.1|WP_016848857.1|473696_474359_-|organic-solvent-ABC-transporter
MKTTVLSAVLASTLLVCAPATVLAQPAAASALAQGAATKTVIDSSTRILSTLDQRRAEFRSNPAALRQFINGELNKAFDRDYSARLVLGVHGRGASDADVKLFADALADNLMQRYGTALLNFEGKPTFRAKSESALPGNRGVKVSTDLLRAGNDPTPVDYLMRNTGGQWKIFDVMIEGISYVQTFKTQFDGPLREKGIAKVAAELRSGNLQVGAAPANGN
>NZ_CP017188.1|WP_026006798.1|473416_473707_-|STAS-domain-containing-protein
MATNTVQRMGDTLVINGVLDRAAVTAAWPQAIAQLDGARALDLSGVQRLDSAGVAMLAELAARLRQAGSGEVVGEASGLDELRAAYRLSPTLDFQA
>NZ_CP017188.1|WP_029829718.1|472350_473406_-|VacJ-family-lipoprotein
MTQFRSLPLLASLLLGACASQAPKSAPPSGGTAIAPAADAPVRDDAGVTAQPAASGMAAPDALPASAAAPADPQAAAGADTAAAGAPTDAESDFDALYGPTTSQASANGAPAQPGAAPAYDPWERYNRGMHRFNMAVDRGVARPLATAYTKVVPSPARLGVTNFFDNLGTPLTMVNQLLQGHPVHAMQSLGRFVMNSTLGVAGLFDPASAAGIPRRSEDFGQTLGAWGWRNSRYFELPLFGPRTVRDTFGLAGDIPLSWIRQVDDSGTRFALQGLQLVDTRAQLMSLDSLRDQAPDEYALTRDAWMQRRNYQITRDLRSHREKNNELPEYLRDDKDNTVPGNAMPIPNWVR
>NZ_CP017188.1|WP_016850439.1|471703_472213_+|nuclear-transport-factor-2-family-protein
MSLSGAGEQAMTFKYFFSSSMLALSMVTSCSHVPGTASTPDTQAEQYIVDCSRDWAESVVTGNRSKRRIYFADDFIGTDTKGRRYDKSQVTRETGPAKQIISNTLDEINVRFFGDTAIAHGSETWTRKDGSTGRYVWTDIWIKRSGQWQIIAAQDAAVPVPTPPRNDGT
>NZ_CP017188.1|WP_016850440.1|471123_471675_+|glutathione-peroxidase
MSQTLYDIPVTRIDGQPTTLADYRGKVLLVVNVASKCGLTPQYEGLEALYRDKRALGLEVLAFPANDFNGQEPGSEAEIAQFCQLTYDVTFPMFAKIAVAGDQAHPLYGALTSTHPHTTGDGPMREKLAGYGIAPNPAPGVVWNFEKFLIGRDGKIIDRFAPDIPADDARLRAAIDAALATRS
>NZ_CP017188.1|WP_033483042.1|470589_470970_+|hypothetical-protein
MATRWIHAALCALLLTACSNSPATRQAAAANAPQPPHTVSADAAQCTAKGGQLRPVGRMQIPRCIVPYADAGKTCTDNSDCSGDCLATSIVPTGAAATGTCQRDSDRFGCRQTVVGGRGQAALCID
>NZ_CP017188.1|WP_078518009.1|485229_486864_+|exodeoxyribonuclease-V-subunit-alpha
MFAALFPSATTGQDRQAQAAALALRRALLLITGGPGTGKTTTIARLLLLRLAQAHAAGQPPPRIALAAPTGRAAERMAESLRIALARAIEQGLPAEHQGASPLPPAGEGARRAGEGTAPTDFSWHSALPTGASTLHRLLGVIPDSPHFRHDADNPLPFDLIVVDEASMVDLPLMCKLVQAVADGTQLILLGDADQLPSVEAGDVLAAILQAAGPADTLPPDDARALQPLLGSAPVTAPAASTPVGHLAGHRVHLLRGYRQAADFALAPLADAVRIGDADTALSLLRSGTLPGVHFHEDGDDPLSLGRDALLAHWHALTATNDPADALRQAGRLRLLTAVRAGPQGARGLNARIEQLLAESGSGARRLGAASPWFHGRLLLITENSYRHGLFNGDVGICLRSEASPASVRDPQAALVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDEVWLQLPTRDARVLSRELLYTGITRARRALHLAGSEAVIRSALARHAARISGLAWRLGAEQMQPTADAASPLRATTPTALGNPIQGSLF
>NZ_CP017188.1|WP_033483028.1|487653_488820_+|nucleoside-hydrolase
MLSELGVADAPVLTPTEAAVLRELRLHRPQLPLDTLLFTDPNRDPDDVVTYTIAKQLQVEGFLRLTDVVVTLGDADMRSQRAQLAKGVFDRLALPDVRVARGQDYPMTSTQAREHSKFLAEGDALRAAPDAVHTDGVRAMRERLVTSPHKLGMVVIAGMTDASALLAEAGDLVREKVASITIMGGIDPARDADGFVQPDARPYNNATDIHAARALYRRAQQLGIPLRILTKEAAYRAAVPPAFYEGIARNGHPVGEYLRDVQKNALKGLWEGIQANLIRDLDTAWFFRTFVAAQPQDPVAAGQQGSMSFDAIWPQVTKLNLYDPLTLLAALPGTARLLFQPTPMHREGASPVEHVGHAEVVRPEKARLLLSALAKAALAHDDEEQHAR
>NZ_CP017188.1|WP_005912356.1|488922_489021_-|hypothetical-protein
MSKGMDQKKNQKKEPTKTLKEKRAAKQEKRGK
>NZ_CP017188.1|WP_029829712.1|489169_491095_-|aminopeptidase-precursor
MRIHSKHIPHFRLARASVLTVALALFAGQGFAQTGNGPTYVAPTPTVAPPVDHAFAGVMRVDVDATDVARRIFTVHQQIPVDGSGAVTLLYPRWEAASHGPSLTVTDLAGLEVSAAGRRLPWRRDGYEPHAFHVEVPAGTQQIEVRFQMLAGGELLTRDIVSVPWQRLLLYPAGWYARNIPVAAMVTLPGGLRPFSALDVERAGGTHYAFKTTSLETLLDAPVLAGRYTAQLPLTGAVSLDIVAQRPADLQVPPARVAELRSLLAQLGAVFGPPPFARYAILARLSDEGSAGGAEHRASSENGLASSHFQDWLGQILSRDLIAHEIVHAWNGFYRTPADLWAPTPNVPVSGRLLWMYEGQTEFWGRVLATRAGQFTPDEVRDRLALEAAEIAARPGRAWRSLSDDVHYPAFMLRQPVAWRDWQRRRDYYSEGVMLWLAVDAELRTRSGGKRSIDDFAQRFFAGATPSAPTRTYTFEDICATLHAVAPADWAGFLRGWIDAHDELDTTRGLTQHGWSLVYTDTPTAAFGASEEEAGVADLTYSIGLTVRADGMVRTVAWNGPAFAAGLRPGTRVSTVNGAPFTQDAVRDAVRGSARRPIVLGIAQDEQRADVQIQYSGPLRYPRLERLANRSDTLARLLAPR
>NZ_CP017188.1|WP_003482333.1|491293_491626_-|hypothetical-protein
MMKWMGTALAAALLMSGCAKVEGEKFVGHWVNLQSQDETMDIERNGETFMVRSTTPKFFSRQPKTESYPAVYKDGALQVTNDGETVNFAIDESNGHLNTGGEQYERVPAK
>NZ_CP017188.1|WP_016849224.1|492755_494555_+|allophanate-hydrolase
MTHTAFWTLADWQSAYAQGAAPAELLSCLIAGLPQGDVAWISRLSLDGLQSRLAGLAQQLMQVGGDLSKLPLYGVPFAAKDNIDVAGLPTTCACPEFAYQPTHNAAVIDRLEAAGAVVIGKTNLDQFATGLVGTRSPYGPVPNAFKAEYISGGSSSGSASVVARGLVPFALGTDTAGSGRVPAGHNNLVGLKPTRGMVSNRGLVPACRTLDCITVLALSVDDADAALRAMGGFDASDAYSRQAPVRPASWPAKPVLGIPASPDWFGDIQAERVYTDALRRLETIGVELELIDFAPLFEVAALLYEGPWVGERYAAIEELMNAKPEVVHPVVRDIVQKATNFSAVDAYKAEYRRMALARKAEALMQGLDGLLVPTAPSIYTIEQLLAEPVTMNARMGVYTNFVNLLDFSAIALPAGMRADGLPAGITLIAPAWHEARLIAFGRRWQAAAPWKRGASQQELPPVDVPAAPSLDGHVIVAVVGAHLSGMPLNGQLTERGATLLESTHTSAAYRLYALPGTVPPKPGMLRTGEGAPIAVELWAMPVERYGSFVALIPSPLGIGSLDLIDGRTVQGFICESWATRGAEDITALGGWRAYVARKN
>NZ_CP017188.1|WP_016849225.1|494638_498286_+|urea-carboxylase
MFKKILIANRGEIAVRIARTLKKMGVTSVAVYSDADHDSLHVSVADEAVALNSGGSSSAAETYLRGDRILEIARKTGAGAVIPGYGFLSENTTFAEQCAEAGVVFVGPTPEQVRRFGLKHTARAIAEAAGVPLTPGTGLLQSLDDAKVAAQRIGYPVMLKSTAGGGGIGLSRCDSAAELATAYDSVQRLGQNFFKDSGIFIERFVADARHVEVQIFGDGKGRVVALGERDCSLQRRHQKVVEETPAPHLPDATRAALLDAAVKLGEAVNYVSAGTVEFIYDAARDAVYFLEVNTRLQVEHPITEAVTGLDLVEWMVRIAAGEPPSFDDLPTPRGTAIEVRVYAENPVRGFQPAPGILTDVQFPEDVRVDTWVQTGTEVSANYDPLIAKVIAYGAHREEARQKLLMALELTRLHGSATNLDYLRSILQSREFSAGTVSTLLLDRYDYVSPVVEVLESGTYTTVQDYPGRTGYWDIGVPPSGPMDDYAFRLANRIVGNHESAAGLECTLQGPTLKFHGDAVIALTGAPALATLDDGEPLPWWKPIAVRASQVLRIAKASSGCRSYIAIRRGIDVPEYLGSKSTFVLGQFGGHAGRTLRVGDVLPISRPEPAVCTTPAPACVPATPPHELVPSYGKHWDIGVLYGPHGAPDFFSEDSIANFFTTDYQVHYNSNRLGVRLVGPKPKWTRSDGGEAGLHPSNVHDCVYAIGSINFTGDTPVILTCDGPSLGGFVCPATIVKAELWKVGQVKPGDTIRFRRMGFDEALALEQAQDEAIRLLRPLPDLSARDLPAAPATVSECVLAELPAEGQRPAVAYRQAGDKYILLEYGPNVLDLRLRLRVHLLMEALKAAKLDGVHELSPGVRSVQIHYDSRVIAQSVLVERLIALETQLPGVEGLQVPSRIVHLPMAFEDSATLGAVTRYIETVKADAPWLPNNVDFIQRINGLSRREDVRTTVFEASYMVMGLGDVYLGAPCAVPLDPRHRLLTSKYNPARTFTAEGTVGIGGVYMCIYGMDSPGGYQLVGRTVPIWNKFLRNRQFGAEPWLLRFFDRVRFYPVTEVELDQFRADFRAGRTHIKVEDAVFDLAEHERLLAQDANSIEAFRERQQTAYATEVALWQNDPKVEAVEDAEEAVMQAVDGSAVVADMWGNVWKVLVDVGQEVQIGEPLVILEAMKMEFQVAASQAGTIAALHCKAGKPVAAGDALVVIRPHPVAATVPYA
>NZ_CP017188.1|WP_016849227.1|499136_500714_-|hypothetical-protein
MRSTLHATVVTAGLLALITTSAAIAAVPSVAQCTTPQPWAHSNAGVVVGNGTAASCTASALATAVAQGGYVTFNCGTRAASIAVNQTINISASTPTVIDGQGKITLDGRQAARIFQVQNGNALSVRNLKLQNGSSVQPPSNTQYAPGTWGGGAIKVSYRGKLEVINSQFLSNRSSIGGGAIFAGSDTDVTIVKSSFSKNTSWLGGALYTQLSRLTIVNSEFVGNQAINAPAGFPDADQFGNSGAIDTDGASLAGYLNAAAGGATLSVCGTVVRNNSAANSGGGATLWAYAPDTIDVRYSTFANNIAYGGPAGGARISLGFGDTTHSGTTITTPGIINVEETSFISNRAEKSNAGALYMDCYGPSCNVSNSTFYGNYAKGVGAAIQHVGWQPSNGDQGKTTVRFNNVTFAENTPGSTLFGSGFDIRNSIFYSKTERTFCSDQSSTGNNLIEYSAAGGLFHSCLTAGLARATDPLLGAPAANGGPTLTQLPAANSPVRNLGSGCRTIDQRGVARDTAVCDVGAVEIK
>NZ_CP017188.1|WP_004429260.1|500838_501018_-|hypothetical-protein
MVTRDAATHCMQRAIACSTAASVDRCSGQLPHARSDVRPRDGAASTRGVLELRLASRCV
>NZ_CP017188.1|WP_033483043.1|501050_501947_+|pseudouridylate-synthase
MPDAPRTHDGTPASRFQLPAGPWVSVFDALCACFPAIAAERWRNRFERGLVRDANDQALALSAPYRVGADIRYFREVADEPAIPYVETVVHADAQLVVACKPHFLPVAPAGAYVRETLLTRLVRRLDNPALVPLHRIDRETAGLVLFSANPATRGIYQALFRERRIRKHYLAVAAPLPELRFPYVHRSRLEPGEPFFRMREGVGEPNSETVIEVVARNADTWTYRLEPVTGRKHQLRVHMAALGTPILHDRFYPALEAQRPDDPGRPLQLFAHTLAFDDPITGEPRRFTATTEPTKSA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017188_3	3.1\|481308\|26\|NZ_CP017188\|CRISPRCasFinder	481308-481333	26	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	281141-281166	4	0.846
NZ_CP017188_3	3.1\|481308\|26\|NZ_CP017188\|CRISPRCasFinder	481308-481333	26	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	209773-209798	4	0.846
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	25338-25368	5	0.839
NZ_CP017188_2	2.2\|407732\|34\|NZ_CP017188\|CRISPRCasFinder	407732-407765	34	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1614842-1614875	6	0.824
NZ_CP017188_2	2.4\|407846\|31\|NZ_CP017188\|CRISPRCasFinder	407846-407876	31	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	934481-934511	6	0.806
NZ_CP017188_2	2.4\|407846\|31\|NZ_CP017188\|CRISPRCasFinder	407846-407876	31	NZ_CP015279	Mycobacterium chimaera strain DSM 44623 plasmid unnamed 1, complete sequence	150331-150361	7	0.774
NZ_CP017188_2	2.4\|407846\|31\|NZ_CP017188\|CRISPRCasFinder	407846-407876	31	NZ_CP015280	Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence	81610-81640	7	0.774
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	110715-110745	7	0.774
NZ_CP017188_2	2.1\|407678\|31\|NZ_CP017188\|CRISPRCasFinder	407678-407708	31	NZ_CP050094	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence	380719-380749	8	0.742
NZ_CP017188_2	2.2\|407732\|34\|NZ_CP017188\|CRISPRCasFinder	407732-407765	34	MH271303	Microbacterium phage MementoMori, complete genome	20739-20772	8	0.765
NZ_CP017188_2	2.2\|407732\|34\|NZ_CP017188\|CRISPRCasFinder	407732-407765	34	MN813682	Microbacterium phage Matzah, complete genome	21015-21048	8	0.765
NZ_CP017188_2	2.2\|407732\|34\|NZ_CP017188\|CRISPRCasFinder	407732-407765	34	MK937591	Microbacterium phage Cinna, complete genome	21039-21072	8	0.765
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP028969	Aminobacter sp. MSH1 plasmid pUSP1, complete sequence	120445-120475	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP026266	Aminobacter sp. MSH1 plasmid pAM01, complete sequence	117739-117769	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	138162-138192	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP013503	Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence	134326-134356	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	580143-580173	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP013509	Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence	134326-134356	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP013520	Rhizobium sp. N113 plasmid pRspN113c, complete sequence	134326-134356	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP013493	Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence	134326-134356	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP013516	Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence	134775-134805	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	316189-316219	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP050081	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence	486605-486635	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	23917-23947	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP049731	Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence	482003-482033	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	1004464-1004494	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	23917-23947	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	428001-428031	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	2251917-2251947	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	140682-140712	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	483199-483229	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	23915-23945	8	0.742
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	NC_027204	Sinorhizobium phage phiM12, complete genome	74902-74932	9	0.71
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	KR052482	Sinorhizobium phage phiN3, complete genome	76608-76638	9	0.71
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	KR052481	Sinorhizobium phage phiM19, complete genome	72551-72581	9	0.71
NZ_CP017188_2	2.6\|407954\|31\|NZ_CP017188\|CRISPRCasFinder	407954-407984	31	KR052480	Sinorhizobium phage phiM7, complete genome	72291-72321	9	0.71
NZ_CP017188_2	2.7\|407680\|35\|NZ_CP017188\|CRT	407680-407714	35	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	138975-139009	10	0.714
NZ_CP017188_2	2.8\|407734\|38\|NZ_CP017188\|CRT	407734-407771	38	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1614844-1614881	10	0.737
NZ_CP017188_2	2.2\|407732\|34\|NZ_CP017188\|CRISPRCasFinder	407732-407765	34	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	72444-72477	11	0.676
NZ_CP017188_2	2.2\|407732\|34\|NZ_CP017188\|CRISPRCasFinder	407732-407765	34	NZ_AP012556	Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence	22147-22180	12	0.647
NZ_CP017188_2	2.2\|407732\|34\|NZ_CP017188\|CRISPRCasFinder	407732-407765	34	NZ_CP023152	Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence	116465-116498	12	0.647

1. spacer 3.1|481308|26|NZ_CP017188|CRISPRCasFinder matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 4, identity: 0.846

gcgagtcgtccgacgccacatcggct	CRISPR spacer
tcgcgtcgtccgacgccgcatcggcg	Protospacer
 ** *************.*******

2. spacer 3.1|481308|26|NZ_CP017188|CRISPRCasFinder matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 4, identity: 0.846

gcgagtcgtccgacgccacatcggct	CRISPR spacer
tcgaggcgtccgacgccacgtcggtt	Protospacer
 **** *************.****.*

3. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 5, identity: 0.839

gggcgccataggtcttgccggca---tctgcgct	CRISPR spacer
gggtgccataggttttgccggcagactctgc---	Protospacer
***.*********.*********   *****

4. spacer 2.2|407732|34|NZ_CP017188|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.824

-cgccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
ccagcccca-tgatctggctgccgcgctcgacgaa	Protospacer
 *. * *** ********************.***.

5. spacer 2.4|407846|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 6, identity: 0.806

cgcca-ccggtacgcgcgttgtcgccgatgcg	CRISPR spacer
-gcaagatggtgcgcgcgttgtcgccgctgcg	Protospacer
 ** *  .***.*************** ****

6. spacer 2.4|407846|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP015279 (Mycobacterium chimaera strain DSM 44623 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.774

cgccaccggtacgcgcgttgtcgccgatgcg	CRISPR spacer
cggcggcggtgcgcgcgttgtcgccggtgat	Protospacer
** *. ****.***************.**

7. spacer 2.4|407846|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP015280 (Mycobacterium chimaera strain DSM 44623 plasmid unnamed 2, complete sequence) position: , mismatch: 7, identity: 0.774

cgccaccggtacgcgcgttgtcgccgatgcg	CRISPR spacer
cggcggcggtgcgcgcgttgtcgccggtgat	Protospacer
** *. ****.***************.**

8. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.774

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
tggcgccataggtcttgcctgaatcgtcatt	Protospacer
 ****************** * ***  *..*

9. spacer 2.1|407678|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP050094 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b4, complete sequence) position: , mismatch: 8, identity: 0.742

tgcccttgccgagctcggttcccaccagccc	CRISPR spacer
ttgcggtgccgaactcgattcccaccagcag	Protospacer
*  *  ******.****.***********

10. spacer 2.2|407732|34|NZ_CP017188|CRISPRCasFinder matches to MH271303 (Microbacterium phage MementoMori, complete genome) position: , mismatch: 8, identity: 0.765

cgccgcca-ctgatctggctgccgcgctcggcgag	CRISPR spacer
-gcagggagaggatcgggatgccgcgctcggcgag	Protospacer
 ** *  *   **** ** ****************

11. spacer 2.2|407732|34|NZ_CP017188|CRISPRCasFinder matches to MN813682 (Microbacterium phage Matzah, complete genome) position: , mismatch: 8, identity: 0.765

cgccgcca-ctgatctggctgccgcgctcggcgag	CRISPR spacer
-gcagggagaggatcgggatgccgcgctcggcgag	Protospacer
 ** *  *   **** ** ****************

12. spacer 2.2|407732|34|NZ_CP017188|CRISPRCasFinder matches to MK937591 (Microbacterium phage Cinna, complete genome) position: , mismatch: 8, identity: 0.765

cgccgcca-ctgatctggctgccgcgctcggcgag	CRISPR spacer
-gcagggagaggatcgggatgccgcgctcggcgag	Protospacer
 ** *  *   **** ** ****************

13. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP028969 (Aminobacter sp. MSH1 plasmid pUSP1, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
cggcgcgataggtcttgccgacatagccgga	Protospacer
 ***** *************.***   **

14. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP026266 (Aminobacter sp. MSH1 plasmid pAM01, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
cggcgcgataggtcttgccgacatagccgga	Protospacer
 ***** *************.***   **

15. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

16. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP013503 (Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

17. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

18. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP013509 (Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

19. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP013520 (Rhizobium sp. N113 plasmid pRspN113c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

20. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP013493 (Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

21. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

22. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

23. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

24. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

25. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP049731 (Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

26. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

27. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

28. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

29. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

30. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

31. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

32. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 8, identity: 0.742

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ggacgccataggccttgccggcaagatccca	Protospacer
**.*********.**********    * *

33. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to NC_027204 (Sinorhizobium phage phiM12, complete genome) position: , mismatch: 9, identity: 0.71

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ccgtttcataggtcttgccgtcatcttcgtc	Protospacer
  *. .************** ***** **..

34. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to KR052482 (Sinorhizobium phage phiN3, complete genome) position: , mismatch: 9, identity: 0.71

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ccgtttcataggtcttgccgtcatcttcgtc	Protospacer
  *. .************** ***** **..

35. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to KR052481 (Sinorhizobium phage phiM19, complete genome) position: , mismatch: 9, identity: 0.71

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ccgtttcataggtcttgccgtcatcttcgtc	Protospacer
  *. .************** ***** **..

36. spacer 2.6|407954|31|NZ_CP017188|CRISPRCasFinder matches to KR052480 (Sinorhizobium phage phiM7, complete genome) position: , mismatch: 9, identity: 0.71

gggcgccataggtcttgccggcatctgcgct	CRISPR spacer
ccgtttcataggtcttgccgtcatcttcgtc	Protospacer
  *. .************** ***** **..

37. spacer 2.7|407680|35|NZ_CP017188|CRT matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

cccttgccgagctcggttcccaccagcccgatgct	CRISPR spacer
atgatggtcggctcggtgcccacccgcccgatgct	Protospacer
 .  ** . .******* ****** **********

38. spacer 2.8|407734|38|NZ_CP017188|CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.737

ccgccactgatctggctgccgcgctcggcgaggatgct	CRISPR spacer
agccccatgatctggctgccgcgctcgacgaagaacat	Protospacer
   **  ********************.***.**   *

39. spacer 2.2|407732|34|NZ_CP017188|CRISPRCasFinder matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 11, identity: 0.676

cgccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
gatggaggaggatctggccgccgcgctcgccgag	Protospacer
 .. *  .  ********.********** ****

40. spacer 2.2|407732|34|NZ_CP017188|CRISPRCasFinder matches to NZ_AP012556 (Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence) position: , mismatch: 12, identity: 0.647

cgccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
tctacgggctgatcgggctgctgcgctcggcggc	Protospacer
. .    .****** ******.**********.

41. spacer 2.2|407732|34|NZ_CP017188|CRISPRCasFinder matches to NZ_CP023152 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence) position: , mismatch: 12, identity: 0.647

cgccgccactgatctggctgccgcgctcggcgag	CRISPR spacer
tctacgggctgatcgggctgctgcgctcggcggc	Protospacer
. .    .****** ******.**********.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1339938 : 1351708

Enterobacteria_phage(37.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005913435.1\|1339938_1340895_-	glycosyltransferase	A0A192Y8W7	Salmonella_phage	1.8e-25	27.1
WP_005920793.1\|1340875_1341604_-	hypothetical protein	NA	NA	NA	NA
WP_016851443.1\|1341767_1342712_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_016851442.1\|1342711_1343458_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_005920787.1\|1343677_1344733_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.0e-83	47.4
WP_005913450.1\|1344784_1345672_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	8.5e-94	57.5
WP_016851441.1\|1345668_1346226_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.6e-44	48.9
WP_029829443.1\|1346222_1347122_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.1e-27	35.7
WP_016850197.1\|1347462_1348629_+	nucleotide sugar dehydrogenase	M1HZB2	Paramecium_bursaria_Chlorella_virus	2.7e-116	58.1
WP_016850199.1\|1348911_1350315_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	6.5e-48	30.0
WP_005913455.1\|1350361_1351708_-	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	7.5e-33	27.1

DBSCAN-SWA_2

1862350 : 1951167

Stenotrophomonas_phage(53.85%)

terminase,head,integrase,capsid,portal,transposase,tail,tRNA,plate,holin

attL 1913286:1913330|attR 1951313:1951357

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029996360.1\|1862350_1864501_-\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_078585854.1\|1867248_1867431_-	hypothetical protein	NA	NA	NA	NA
WP_003489572.1\|1867504_1868749_-	MFS transporter	NA	NA	NA	NA
WP_005913639.1\|1869205_1869499_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_026007111.1\|1869810_1871088_-	lytic murein transglycosylase	NA	NA	NA	NA
WP_016849979.1\|1873383_1874346_-\|transposase	IS1595-like element IS1595 family transposase	NA	NA	NA	NA
WP_016849980.1\|1875644_1877192_+	hypothetical protein	NA	NA	NA	NA
WP_016851028.1\|1878716_1879247_+	hypothetical protein	NA	NA	NA	NA
WP_081341541.1\|1879554_1882743_-	Avirulence protein AvrBs3	NA	NA	NA	NA
WP_026007320.1\|1883209_1883524_+	NYN domain-containing protein	NA	NA	NA	NA
WP_070996147.1\|1885368_1885899_+	hypothetical protein	NA	NA	NA	NA
WP_070996149.1\|1886206_1889701_-	Avirulence protein AvrBs3	NA	NA	NA	NA
WP_026007320.1\|1890167_1890482_+	NYN domain-containing protein	NA	NA	NA	NA
WP_026007196.1\|1894564_1895104_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	9.6e-24	34.9
WP_016850980.1\|1895261_1895546_-	hypothetical protein	NA	NA	NA	NA
WP_078585916.1\|1895604_1896321_+	hypothetical protein	NA	NA	NA	NA
WP_029829333.1\|1896494_1897238_-	DUF3011 domain-containing protein	NA	NA	NA	NA
WP_016850983.1\|1897396_1899163_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_005913643.1\|1899585_1900113_+	N-acetyltransferase	NA	NA	NA	NA
WP_005913644.1\|1900288_1900888_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003482581.1\|1900977_1901706_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003482580.1\|1901835_1902360_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_003482577.1\|1902478_1903063_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_005921446.1\|1903259_1905164_+	potassium transporter Kup	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	3.7e-78	33.7
WP_016849298.1\|1905166_1905397_+	hypothetical protein	NA	NA	NA	NA
WP_003482572.1\|1905436_1906477_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	2.7e-06	28.2
WP_033483113.1\|1906529_1906988_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_003482569.1\|1906999_1907779_+	protein TolQ	NA	NA	NA	NA
WP_016849299.1\|1907936_1908386_+	protein TolR	NA	NA	NA	NA
WP_029829330.1\|1908375_1909416_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_003482565.1\|1909601_1910921_+	protein TolB	NA	NA	NA	NA
WP_003482562.1\|1910978_1911497_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
WP_011052060.1\|1911503_1912322_+	tol-pal system protein YbgF	NA	NA	NA	NA
WP_016850466.1\|1912364_1913048_+	7-carboxy-7-deazaguanine synthase QueE	J9PV61	Bacillus_phage	3.0e-38	41.0
1913286:1913330	attL	NA	NA	NA	NA
WP_011038085.1\|1913484_1913820_-	hypothetical protein	NA	NA	NA	NA
WP_016850467.1\|1914163_1914649_+	peptidase S24	A0A218MND2	uncultured_virus	1.1e-13	38.7
WP_050595578.1\|1916655_1917882_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_016851201.1\|1917881_1918349_+	DUF4411 domain-containing protein	NA	NA	NA	NA
WP_029996358.1\|1918380_1919076_-	site-specific DNA-methyltransferase	V9IQV5	Stenotrophomonas_phage	1.1e-107	77.8
WP_053503138.1\|1918993_1919239_-	Com family DNA-binding transcriptional regulator	V9IQK2	Stenotrophomonas_phage	4.1e-14	51.2
WP_029996356.1\|1919264_1920287_-\|portal	phage portal protein	A0A2H4J922	uncultured_Caudovirales_phage	3.1e-140	71.8
WP_033483117.1\|1920286_1922071_-\|terminase	terminase	V9IQL5	Stenotrophomonas_phage	6.6e-271	76.8
WP_029996354.1\|1922192_1923035_+\|capsid	phage capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	1.4e-66	52.7
WP_029996353.1\|1923081_1924098_+\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	8.4e-138	71.1
WP_016851435.1\|1924101_1924821_+\|terminase	terminase	Q9ZXM2	Pseudomonas_virus	1.0e-68	62.5
WP_029996352.1\|1924919_1925387_+\|head	head completion/stabilization protein	V9IQW6	Stenotrophomonas_phage	1.4e-31	50.3
WP_005917735.1\|1925386_1925596_+\|tail	tail protein	K4PAW7	Burkholderia_phage	7.0e-15	59.4
WP_005917737.1\|1925600_1925957_+	membrane protein	V9IQG9	Stenotrophomonas_phage	5.9e-22	56.1
WP_005922189.1\|1925949_1926225_+\|holin	phage holin family protein	V9IQV8	Stenotrophomonas_phage	1.3e-21	59.8
WP_080671044.1\|1926221_1926863_+	lysozyme	V9IQK6	Stenotrophomonas_phage	1.3e-48	60.9
WP_016851123.1\|1926862_1927351_+	hypothetical protein	V9IQW8	Stenotrophomonas_phage	5.8e-28	52.4
WP_016851122.1\|1927347_1927767_+\|tail	tail protein	A0A2H4J906	uncultured_Caudovirales_phage	7.4e-40	64.4
WP_016851121.1\|1927754_1928210_+	phage virion morphogenesis protein	V9IQH0	Stenotrophomonas_phage	1.3e-37	59.0
WP_080573070.1\|1928382_1929207_+	hypothetical protein	NA	NA	NA	NA
WP_081341542.1\|1929389_1929692_+	hypothetical protein	NA	NA	NA	NA
WP_016851120.1\|1930098_1930989_+\|plate	baseplate assembly protein	V9IQV9	Stenotrophomonas_phage	4.7e-84	53.7
WP_026007225.1\|1930981_1931530_+\|tail	phage tail protein I	V9IQK7	Stenotrophomonas_phage	7.9e-50	52.6
WP_016851118.1\|1931533_1932739_+	hypothetical protein	A0A1S5NTG6	Burkholderia_phage	9.6e-32	46.2
WP_080573069.1\|1932692_1932968_+	hypothetical protein	NA	NA	NA	NA
WP_016851116.1\|1933046_1933610_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	7.4e-27	48.6
WP_016851115.1\|1933606_1933966_+\|plate	phage baseplate protein	V9IQW0	Stenotrophomonas_phage	1.6e-35	64.4
WP_016851114.1\|1933977_1935144_+\|tail	tail sheath protein	E5FFG9	Burkholderia_phage	2.6e-135	64.5
WP_016851197.1\|1935174_1935684_+\|tail	phage major tail tube protein	V9IQX1	Stenotrophomonas_phage	5.8e-71	78.1
WP_029996350.1\|1935729_1936032_+\|tail	phage tail assembly protein	V9IQM4	Stenotrophomonas_phage	1.4e-24	66.3
WP_005922203.1\|1936040_1936154_+\|tail	GpE family phage tail protein	A0A0M4R2P3	Salmonella_phage	4.2e-06	68.6
WP_029996349.1\|1936183_1939054_+\|tail	phage tail tape measure protein	V9IQL1	Stenotrophomonas_phage	5.2e-185	46.6
WP_016851190.1\|1939066_1939468_+\|tail	tail assembly protein	V9IQX3	Stenotrophomonas_phage	2.5e-37	59.1
WP_016851189.1\|1939464_1940451_+	phage late control protein	V9IQM7	Stenotrophomonas_phage	4.0e-92	55.1
WP_080573077.1\|1940737_1941685_+	hypothetical protein	NA	NA	NA	NA
WP_080573076.1\|1941650_1941989_+	DUF4325 domain-containing protein	A0A2H4J4X6	uncultured_Caudovirales_phage	1.8e-07	32.0
WP_080573075.1\|1941993_1942458_+	hypothetical protein	NA	NA	NA	NA
WP_026007241.1\|1942764_1943193_-	XRE family transcriptional regulator	A4JWR8	Burkholderia_virus	1.4e-17	42.8
WP_016851187.1\|1943259_1943514_+	DNA-binding protein	A0A1B0VRL1	Pseudomonas_phage	2.2e-07	46.7
WP_080573074.1\|1943520_1943832_+	hypothetical protein	V9IQW3	Stenotrophomonas_phage	5.0e-25	57.0
WP_016851186.1\|1943854_1944136_+	hypothetical protein	NA	NA	NA	NA
WP_011038118.1\|1944132_1944372_+	hypothetical protein	NA	NA	NA	NA
WP_080573081.1\|1944399_1947063_+	bifunctional DNA primase/helicase	V9IQW5	Stenotrophomonas_phage	0.0e+00	69.9
WP_016851184.1\|1947356_1947575_+	hypothetical protein	NA	NA	NA	NA
WP_080573080.1\|1947625_1947850_+	hypothetical protein	NA	NA	NA	NA
WP_016851182.1\|1947846_1948110_+	hypothetical protein	NA	NA	NA	NA
WP_016851181.1\|1948188_1948599_+	hypothetical protein	NA	NA	NA	NA
WP_080573078.1\|1948612_1948768_+	hypothetical protein	NA	NA	NA	NA
WP_026007240.1\|1948760_1949036_+	hypothetical protein	NA	NA	NA	NA
WP_080573079.1\|1949128_1949278_+	hypothetical protein	NA	NA	NA	NA
WP_016851176.1\|1949543_1949750_+	hypothetical protein	NA	NA	NA	NA
WP_011038128.1\|1949707_1949968_+	hypothetical protein	V9IQX6	Stenotrophomonas_phage	2.2e-18	58.3
WP_026007239.1\|1949967_1951167_+\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	2.3e-118	53.5
1951313:1951357	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3198613 : 3206469

Xanthomonas_phage(63.64%)

coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033482610.1\|3198613_3198952_+	phage-like protein	Q38057	Xanthomonas_phage	7.1e-49	81.2
WP_033482613.1\|3199018_3199330_+	hypothetical protein	A0A1W6DXV7	Xanthomonas_phage	2.1e-47	89.3
WP_033482614.1\|3199349_3200672_-	filamentous phage phiLf protein I	Q4LAU4	Stenotrophomonas_phage	2.4e-129	55.2
WP_029219915.1\|3200673_3200994_-\|coat	minor coat protein	Q4LAU3	Stenotrophomonas_phage	1.5e-21	46.2
WP_005918124.1\|3201004_3201244_-	hypothetical protein	Q9XJ91	Xanthomonas_phage	7.4e-37	97.5
WP_033482619.1\|3202132_3202261_-	hypothetical protein	NA	NA	NA	NA
WP_075241185.1\|3202289_3202406_-	hypothetical protein	NA	NA	NA	NA
WP_080683254.1\|3202381_3202513_-\|coat	coat protein	NA	NA	NA	NA
WP_033482623.1\|3202544_3202841_-	single-stranded DNA-binding protein	B1NI78	Stenotrophomonas_phage	1.5e-26	65.6
WP_033482625.1\|3202837_3203944_-	replication protein	S0F3I3	Stenotrophomonas_phage	1.0e-160	75.1
WP_033482627.1\|3203936_3204116_-	hypothetical protein	NA	NA	NA	NA
WP_033482628.1\|3204278_3204503_-	hypothetical protein	A0A1W6DXK4	Xanthomonas_phage	8.0e-25	89.9
WP_080683255.1\|3204630_3205119_+	hypothetical protein	A0A077JCZ5	Xanthomonas_phage	8.0e-62	94.6
WP_016850842.1\|3205192_3205444_-	hypothetical protein	NA	NA	NA	NA
WP_050595534.1\|3205520_3205871_+	hypothetical protein	A0A1W6DXV7	Xanthomonas_phage	7.9e-11	37.7
WP_050595535.1\|3205875_3206469_-	hypothetical protein	A0A1D6ZIU8	Xanthomonas_phage	4.3e-25	45.2

DBSCAN-SWA_4

3710618 : 3731805

Xanthomonas_virus(23.08%)

portal,capsid,tail,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033482658.1\|3710618_3715019_-	hypothetical protein	C4ML20	Xanthomonas_virus	0.0e+00	50.7
WP_029828853.1\|3715009_3715402_-	hypothetical protein	Q2NPH1	Xanthomonas_virus	4.1e-32	52.8
WP_029828851.1\|3715401_3715869_-	DUF1833 domain-containing protein	Q52PL0	Xanthomonas_phage	8.0e-35	46.5
WP_029828849.1\|3715865_3716222_-	hypothetical protein	Q52PL1	Xanthomonas_phage	1.6e-19	44.4
WP_029828847.1\|3716221_3718939_-\|tail	phage tail tape measure protein	C4ML16	Xanthomonas_virus	2.4e-94	34.0
WP_029828845.1\|3719100_3719580_-	hypothetical protein	NA	NA	NA	NA
WP_029828844.1\|3719576_3720320_-	hypothetical protein	NA	NA	NA	NA
WP_029828843.1\|3720359_3720791_-	hypothetical protein	NA	NA	NA	NA
WP_029828840.1\|3720783_3721104_-	hypothetical protein	NA	NA	NA	NA
WP_029828838.1\|3721100_3721877_-	hypothetical protein	A0A291AUT0	Sinorhizobium_phage	7.3e-25	34.9
WP_050595538.1\|3721924_3722929_-\|capsid	minor capsid protein E	A0A2H4J890	uncultured_Caudovirales_phage	1.6e-56	40.8
WP_033482660.1\|3723000_3723672_-\|head	head decoration protein	NA	NA	NA	NA
WP_029828834.1\|3723674_3725078_-	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	1.2e-41	45.9
WP_033482662.1\|3725067_3726570_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	4.2e-109	48.3
WP_029828831.1\|3726562_3726778_-	hypothetical protein	B7SYD5	Stenotrophomonas_phage	8.0e-06	41.9
WP_029828829.1\|3726779_3728867_-	DNA packaging protein	A5LH27	Enterobacteria_phage	2.3e-153	42.5
WP_029828821.1\|3730373_3730652_-	hypothetical protein	NA	NA	NA	NA
WP_050595539.1\|3730648_3731152_-	hypothetical protein	Q2NPA5	Xanthomonas_phage	1.6e-20	40.0
WP_029828818.1\|3731148_3731805_-	DNA primase	A0A248XCW5	Klebsiella_phage	2.4e-37	44.5

DBSCAN-SWA_5

3751885 : 3762722

Salmonella_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029828741.1\|3751885_3752794_+	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	3.1e-43	33.9
WP_033482666.1\|3752797_3753553_+	hypothetical protein	NA	NA	NA	NA
WP_029828737.1\|3753549_3753768_+	hypothetical protein	NA	NA	NA	NA
WP_029828735.1\|3753764_3754208_+	hypothetical protein	NA	NA	NA	NA
WP_029828734.1\|3754204_3754423_+	hypothetical protein	NA	NA	NA	NA
WP_029828732.1\|3754556_3754778_+	hypothetical protein	NA	NA	NA	NA
WP_033482667.1\|3754764_3754989_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_003481884.1\|3755209_3755422_-	carbon storage regulator	J7I430	Pseudomonas_phage	1.3e-13	76.5
WP_016849897.1\|3755561_3758210_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-84	40.0
WP_003481873.1\|3758311_3758800_-	regulatory protein RecX	NA	NA	NA	NA
WP_003481871.1\|3759111_3760146_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	5.1e-114	61.3
WP_005915033.1\|3760318_3760960_-	LexA family transcriptional regulator	A0A1W6JNS2	Morganella_phage	2.4e-13	40.2
WP_005915030.1\|3761045_3762722_-	2-polyprenylphenol 6-hydroxylase	G8DDN0	Micromonas_pusilla_virus	1.9e-41	29.4

DBSCAN-SWA_6

4494981 : 4538130

Stenotrophomonas_phage(62.86%)

terminase,head,capsid,portal,tail,protease,plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003483788.1\|4494981_4496268_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.3e-137	59.9
WP_002806026.1\|4496393_4497020_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.0e-56	57.4
WP_016851282.1\|4497112_4498405_-	trigger factor	NA	NA	NA	NA
WP_016851283.1\|4500419_4500617_+	hypothetical protein	NA	NA	NA	NA
WP_033482901.1\|4500802_4501132_-	hypothetical protein	NA	NA	NA	NA
WP_016851285.1\|4502139_4503261_+	hypothetical protein	A0A1B0VBT5	Salmonella_phage	1.9e-29	29.4
WP_026007262.1\|4504402_4505302_+	hypothetical protein	NA	NA	NA	NA
WP_078585598.1\|4506229_4506646_+	N-acetyltransferase	NA	NA	NA	NA
WP_029828252.1\|4506818_4507520_-	site-specific DNA-methyltransferase	V9IQV5	Stenotrophomonas_phage	2.1e-103	75.5
WP_078585599.1\|4507437_4507683_-	Com family DNA-binding transcriptional regulator	V9IQK2	Stenotrophomonas_phage	7.0e-14	51.2
WP_016850658.1\|4507708_4508722_-\|portal	phage portal protein	A0A2H4J922	uncultured_Caudovirales_phage	5.8e-139	71.9
WP_029828248.1\|4508721_4510485_-\|terminase	terminase	V9IQL5	Stenotrophomonas_phage	1.2e-269	76.8
WP_029828246.1\|4510627_4511470_+\|capsid	phage capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	3.4e-68	53.5
WP_029828245.1\|4511516_4512530_+\|capsid	phage major capsid protein, P2 family	Q9ZXM3	Pseudomonas_virus	9.3e-137	71.4
WP_016851153.1\|4512533_4513253_+\|terminase	terminase	Q9ZXM2	Pseudomonas_virus	5.3e-70	63.8
WP_029828243.1\|4513351_4513819_+\|head	head completion/stabilization protein	V9IQW6	Stenotrophomonas_phage	4.6e-30	49.7
WP_005917735.1\|4513818_4514028_+\|tail	tail protein	K4PAW7	Burkholderia_phage	7.0e-15	59.4
WP_005929454.1\|4514032_4514389_+	membrane protein	V9IQG9	Stenotrophomonas_phage	3.5e-22	56.1
WP_005922189.1\|4514381_4514657_+\|holin	phage holin family protein	V9IQV8	Stenotrophomonas_phage	1.3e-21	59.8
WP_078585789.1\|4514653_4515295_+	lysozyme	V9IQK6	Stenotrophomonas_phage	2.7e-49	60.4
WP_016851162.1\|4515294_4515783_+	hypothetical protein	V9IQW8	Stenotrophomonas_phage	1.2e-28	52.6
WP_016851161.1\|4515779_4516199_+\|tail	tail protein	A0A2H4J906	uncultured_Caudovirales_phage	1.1e-40	65.2
WP_016851160.1\|4516186_4516636_+	phage virion morphogenesis protein	V9IQH0	Stenotrophomonas_phage	6.3e-37	56.5
WP_078585788.1\|4516817_4518356_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_016851159.1\|4518451_4519342_+\|plate	baseplate assembly protein	V9IQV9	Stenotrophomonas_phage	2.6e-82	53.0
WP_029828239.1\|4519334_4519877_+\|tail	phage tail protein I	V9IQK7	Stenotrophomonas_phage	1.1e-51	56.6
WP_016850456.1\|4519889_4521689_+	hypothetical protein	V9IQX0	Stenotrophomonas_phage	8.9e-82	37.6
WP_016850455.1\|4521762_4522056_+	hypothetical protein	NA	NA	NA	NA
WP_016850454.1\|4522058_4522733_+	hypothetical protein	NA	NA	NA	NA
WP_016850453.1\|4522875_4523439_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	8.2e-26	47.0
WP_016850452.1\|4523435_4523795_+\|plate	phage baseplate protein	V9IQW0	Stenotrophomonas_phage	2.1e-35	62.7
WP_029828235.1\|4523806_4524973_+\|tail	tail sheath protein	E5FFG9	Burkholderia_phage	1.1e-133	63.2
WP_016850450.1\|4525002_4525512_+\|tail	phage major tail tube protein	V9IQX1	Stenotrophomonas_phage	2.1e-73	81.1
WP_029828232.1\|4525557_4525860_+\|tail	phage tail assembly protein	V9IQM4	Stenotrophomonas_phage	2.2e-25	67.4
WP_005922203.1\|4525868_4525982_+\|tail	GpE family phage tail protein	A0A0M4R2P3	Salmonella_phage	4.2e-06	68.6
WP_029828231.1\|4526011_4528882_+\|tail	phage tail tape measure protein	V9IQL1	Stenotrophomonas_phage	8.9e-193	47.1
WP_016851032.1\|4528894_4529296_+\|tail	tail assembly protein	V9IQX3	Stenotrophomonas_phage	3.5e-39	61.4
WP_016851031.1\|4529292_4530279_+	phage late control protein	V9IQM7	Stenotrophomonas_phage	2.8e-93	55.7
WP_029828228.1\|4530885_4531317_-	transcriptional regulator	E5E3U2	Burkholderia_phage	1.4e-09	38.2
WP_078537260.1\|4531402_4531651_+	hypothetical protein	NA	NA	NA	NA
WP_008572766.1\|4531653_4531974_+	hypothetical protein	V9IQW3	Stenotrophomonas_phage	2.0e-24	58.7
WP_016851009.1\|4531984_4532263_+	hypothetical protein	NA	NA	NA	NA
WP_016851008.1\|4532259_4532472_+	hypothetical protein	NA	NA	NA	NA
WP_078585791.1\|4532504_4535177_+	bifunctional DNA primase/helicase	V9IQW5	Stenotrophomonas_phage	0.0e+00	69.7
WP_015472861.1\|4535497_4535716_+	hypothetical protein	NA	NA	NA	NA
WP_016849269.1\|4535712_4536000_+	hypothetical protein	NA	NA	NA	NA
WP_016849270.1\|4535999_4536272_+	hypothetical protein	NA	NA	NA	NA
WP_016851003.1\|4536401_4536776_+	hypothetical protein	V9IQL6	Stenotrophomonas_phage	1.7e-19	48.8
WP_014091203.1\|4536768_4536951_+	hypothetical protein	NA	NA	NA	NA
WP_016851002.1\|4536943_4537216_+	hypothetical protein	NA	NA	NA	NA
WP_016851001.1\|4537212_4537437_+	hypothetical protein	NA	NA	NA	NA
WP_016851000.1\|4537502_4537706_+	hypothetical protein	NA	NA	NA	NA
WP_016850999.1\|4537702_4537912_+	hypothetical protein	NA	NA	NA	NA
WP_078585787.1\|4537908_4538130_+	hypothetical protein	V9IQX6	Stenotrophomonas_phage	1.6e-14	56.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017188

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection