CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP017190	Xanthomonas campestris pv. vesicatoria str. 85-10, complete sequence	4 crisprs	DEDDh,csa3,cas3,WYL,DinG	2	10
NZ_CP017191	Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_1, complete sequence	0 crisprs	NA	0	11
NZ_CP017193	Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_3, complete sequence	0 crisprs	NA	0	0
NZ_CP017192	Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_2, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017190_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017190_1

139236-139356

Orphan

Consensus_repeat	Method
CATCGCCGGAACCCAC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP017190_1

>merge|NZ_CP017190|1|139236-139356|PILER-CR
CATCGCCGGAACCCACCTTGGCGGTCACGCGGCCCTTGGTGTGACGAATGGTCATGTCGCCCGAACCCACGTCGGCGCTCACTGCGGCGGCCCCGTTGATCTGCGCATCGCCGGAACCCAC

>NZ_CP017190|1|1|139236-139356|PILER-CR
CATCGCCGGAACCCAC	CTTGGCGGTCACGCGGCCCTTGGTGTGACGAATGGTCA
TGTCGCCCGAACCCAC	GTCGGCGCTCACTGCGGCGGCCCCGTTGATCTGCG
CATCGCCGGAACCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017190.1\|WP_008576522.1\|143973_145323_+\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223936
NZ_CP017190.1\|WP_003483692.1\|141587_141950_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP017190.1\|WP_074038585.1\|141952_142201_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_011346971.1\|131884_133252_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_CP017190.1\|WP_008578099.1\|140715_141591_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP017190.1\|WP_008571999.1\|125472_128301_-\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP017190.1\|WP_011346969.1\|129407_130895_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|369647
NZ_CP017190.1\|WP_039416416.1\|137549_137972_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_011346968.1\|128481_129411_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP017190.1\|WP_008576520.1\|142976_143948_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|223619
NZ_CP017190.1\|WP_011346970.1\|131140_131641_-\|DUF3060-domain-containing-protein	unknown	unknown	gnl\|CDD\|371435
NZ_CP017190.1\|WP_039416420.1\|145552_146305_+\|DUF2058-family-protein	unknown	unknown	gnl\|CDD\|225664
NZ_CP017190.1\|WP_011346974.1\|136016_137420_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
NZ_CP017190.1\|WP_011346979.1\|142333_142891_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP017190.1\|WP_011346978.1\|139732_140719_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_041855041.1\|133416_134400_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NZ_CP017190.1\|WP_008576524.1\|145315_145552_+\|protein-SlyX	unknown	unknown	gnl\|CDD\|179141
NZ_CP017190.1\|WP_074038586.1\|134410_135745_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP017190.1\|WP_011346981.1\|146647_147481_+\|transporter	unknown	unknown	gnl\|CDD\|379259
NZ_CP017190.1\|WP_011346976.1\|138338_138869_-\|DUF2884-family-protein	unknown	unknown	gnl\|CDD\|378556

Protein	Function_ID	Function_description	E-value
NZ_CP017190.1\|WP_008576522.1\|143973_145323_+\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl\|CDD\|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NZ_CP017190.1\|WP_003483692.1\|141587_141950_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	3.34567e-30
NZ_CP017190.1\|WP_011346971.1\|131884_133252_-\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP017190.1\|WP_008571999.1\|125472_128301_-\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP017190.1\|WP_011346969.1\|129407_130895_-\|cupin-domain-containing-protein	gnl\|CDD\|369647	pfam08007, Cupin_4, Cupin superfamily protein. This family contains many hypothetical proteins that belong to the cupin superfamily.	1.49269e-122
NZ_CP017190.1\|WP_039416420.1\|145552_146305_+\|DUF2058-family-protein	gnl\|CDD\|225664	COG3122, COG3122, Uncharacterized protein conserved in bacteria [Function unknown].	2.91364e-46
NZ_CP017190.1\|WP_008578099.1\|140715_141591_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.90791e-58
NZ_CP017190.1\|WP_008576520.1\|142976_143948_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	1.53779e-68
NZ_CP017190.1\|WP_011346970.1\|131140_131641_-\|DUF3060-domain-containing-protein	gnl\|CDD\|371435	pfam11259, DUF3060, Protein of unknown function (DUF3060). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed.	2.83665e-09
NZ_CP017190.1\|WP_011346968.1\|128481_129411_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.21992e-08
NZ_CP017190.1\|WP_011346974.1\|136016_137420_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_CP017190.1\|WP_011346979.1\|142333_142891_+\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	4.76526e-78
NZ_CP017190.1\|WP_041855041.1\|133416_134400_+\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	4.56066e-10
NZ_CP017190.1\|WP_008576524.1\|145315_145552_+\|protein-SlyX	gnl\|CDD\|179141	PRK00846, PRK00846, hypothetical protein; Provisional.	3.64875e-37
NZ_CP017190.1\|WP_074038586.1\|134410_135745_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	5.31548e-121
NZ_CP017190.1\|WP_011346981.1\|146647_147481_+\|transporter	gnl\|CDD\|379259	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation.	9.33232e-11
NZ_CP017190.1\|WP_011346976.1\|138338_138869_-\|DUF2884-family-protein	gnl\|CDD\|378556	pfam11101, DUF2884, Protein of unknown function (DUF2884). Some members in this bacterial family of proteins are annotated as YggN which currently has no known function.	2.57703e-12

>NZ_CP017190.1|WP_011346976.1|138338_138869_-|DUF2884-family-protein
MKLLVSAVVMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRDGLPAATIGVDGALSIDGKPVDLNDAQRQAMRSYYAQVQGVAKKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDRIGDKIEAEADTFKHKALQICDQLATLRTAQDAAAHLVPAFAPYSTLTQHDIDDCRK
>NZ_CP017190.1|WP_039416416.1|137549_137972_-|hypothetical-protein
MNKFVMLCMALLLCTLAACGDQSSRRAERGKPRVAVTTQSVMIRRPPAANAEITPEGTLKIDDIALPQKEASRAKLQLLFGHLQMLRQQAVNEAGPDPEYKSIKLTATPQIQTLSGELLDEIPSLQPYRESFSNVQAERH
>NZ_CP017190.1|WP_011346974.1|136016_137420_+|class-II-fumarate-hydratase
MSERFRTEHDSMGELQVPADALWGAQTQRAVQNFPVSGQPMPRGFIRALGLIKAAAAGVNAELGLLPKAIGKTVQAAALQVAEGRFDAQFPIDVYQTGSGTSSNMNANEVIATLATRAGKDAVHPNDHVNLGQSSNDVVPTAIRVSALLAVQEHLQPALKHLRKTIDKRAKSLDKIVKTGRTHLMDAMPLTFGQEFGAWSAQLSSAQERIDDALKRLRRLPLGGTAIGTGINADPRFGGKVAKALSSLSGARFESAENKFEGLAAQDDAVELSGQLNALAVALIKIANDLRWMNAGPLAGLGEIELPALQPGSSIMPGKVNPVIPEATVMACAQVIGHHTAITIAGQTGNFQLNVTLPLIAYNLLDSINLLGNVSRLLADTAIAGLKVRQERVREALDRNPILVTALNPIIGYEKAAAIAKRAYKEQRPVLDVAKEDSGLGEAELRRLLDPAALTRGGIQAGGGGGG
>NZ_CP017190.1|WP_074038586.1|134410_135745_-|HlyC/CorC-family-transporter
MEADMLGNVLLLLVALLLVLLNGFFVAAEFALVKLRHTQAVGLAQTNGWRGRLLLGVHAHLDAYLSACQLGITLASLGLGWVGEPAFAHLLQPLFDTLGLSPEAAQFTALAIAFSLISFLHIVLGELAPKTMAIRRPERMSLWTAAPLYVFYWLMYPAIWVLNTSANRFLRLLGWGEVEHHSHRYSREELMLIVGRQDPNAAAPDQGLALMSHALELPDLVAGDLMRPREHLRSLREGMTLEAVLAEFSESRYSRYPWFDADGEKVLGILHTKDLLVAMARGQNLDDLRPLLRPPTVLTLETPIPNALEQFRAGTTHLALCVEEEGRILGFFTLEDLLEVVVGDIEDEHRHVVRDAPIRGQDGSLLVAGSTSIFRLERLLGQDLSAPDHVNSVGGLILYQLQRLPEEGETLELDGHLLTVRRMAGHRIQAVTVRPVGEAVDAAS
>NZ_CP017190.1|WP_041855041.1|133416_134400_+|CAP-domain-containing-protein
MVELPALFRPAMRPIFARLAFAILPAALPATAQDADFAAQAAALYRTPPAIASCRAGELQPAQRQRVLALINDIRRLHGLDAVDDDPAAEPEATQAALVIAANGRLSHTPTPDWRCYSDSAAKGARRSLIYGGVSSPLLRFSSADEIVIEWLTDANNVSAGGLGHRRWLLDPFLQRVAFGMVAGRNGAAFSSGAALRLVPTVGVAARTREDFVAWPIGEYPGRYYADDALLSFTALPDRKRKFANRDVDYADAQVEIRERDGRQLQVRNLSEDHEGFGVPNSLQFRVPRLQPGVIYDVTIRGVRFGGQSRDYRYWFRIGQSPRASTE
>NZ_CP017190.1|WP_011346971.1|131884_133252_-|adenylosuccinate-lyase
MSDSALLALSPLDGRYASKVDALRPIFSEYGLIKARVKVEIEWLLALAAEPGIAELAPFSPAAAQRLRALADDFSVAHAARVKEIERTTNHDVKAVEYFIKEQLKDDAELGPALEFVHFACTSEDINNLSYGLMLEQARREMLLPSLDGITAALRTLAHAQAAQPMLSRTHGQTASPTTLGKEIANVVARLERQRKQIAAVELTGKINGAVGNYNAHLVSYPDLDWAAFAQRFVESLGLVFNPYTTQIEPHDNVAEIGDASRRANTILIDLARDIWGYISLGYFKQKLKEGEVGSSTMPHKVNPIDFENAEGNLGIANALFEHFSAKLPISRWQRDLTDSTVLRALGTAFGHTQVALDSLAKGLGKLTVNPERLDADLDAAWEVLAEAVQTVMRRHGLPNPYEQLKALTRGQGITAASMQAFVESLQLPEDDKQRLRALTPGAYTGLAEQLARAI
>NZ_CP017190.1|WP_011346970.1|131140_131641_-|DUF3060-domain-containing-protein
MRVTHTALTLLTLGSVLALSGCGGDGPAAQAPSAVSNTLTDPASGADCAGKDVRLTRNDSEWILHGECGTVTITASRGAMNLDTARSIRLEGSNFTVLNQQLGQLSVSGHDNTLNLTDVDRVDIQGNKNLVLARAVKQVRFSGNDNTVNPSSKPVLDDRGSGNKVM
>NZ_CP017190.1|WP_011346969.1|129407_130895_-|cupin-domain-containing-protein
MAVRKATPLAIEVQARPGQPLGMPVERFLRNYWHKHPLLIRNAFADFASPLQPEDLAGLACEDGVLARLISHDRATDGWDVRTGPFQETDFPGLPDHDWTLLVQDVDKWDADVRALLEHFRFLPRWRIDDIMISFAATGGSVGAHVDHYDVFLLQGQGHRRWQIDARTVQGRKATPLAFRDDVELKLLREFKPTHDWVLGPGDMLYLPPLIPHHGVAEDACLTFSIGTRAPSSAELIGDYLDTLIADADDAVRYHDQDLKVPADPYEIDVTAMNRVVAALNALRMNDPDRLGDWFGRFMTTYRASGDVVPAPEPIPREAVEQALEEGVLLHRHPWSRLAWRRAKRGATLFCSGLEFALSAKDASRLAAAEEIDGTLYAQLSPRGREVVLELLAQGHYQRAHEDAEDDIADDDHAHALSVSADHDDQDADDDAPEADGDIDADADVEQVAASADTPAEALQADVEPGDAAEAEQEVDSAIADETDSDDSDDATKPA
>NZ_CP017190.1|WP_011346968.1|128481_129411_-|GNAT-family-N-acetyltransferase
MSAHARPQIVTLDPAADAAALRALRPACATDTAGDTSGVEWDALDPLSLHLAARTDDGQLIASVRLTADRRLDRLGVLPDWRRRGVADQLLAAAVDAARQHGWPGLHACPTPAAEAVFARQGFLPDAPPLSPERIGQARDAPGTVVHRRLDGPMAVDTFTAALAATTGLLCAARRQVLIYTRALDPPLFDNAAVLDALRRFATARHDKRVHVLVQDTASAAASCSAMLRLAQRLPSVFRFRAVSDPVDASFASAYVVGDDAYYFRPTGHRFDDGETWLSGAARSRQLEREFAQIWERSALWNEPRALGI
>NZ_CP017190.1|WP_008571999.1|125472_128301_-|2-oxoglutarate-dehydrogenase-E1-component
MDNLLKQFAQSSQLAGGNAAYIEDLYEQYLVAPDSVDPKWKSYFDGFEGRGAGDVPHSAAIAHILTASKQAANAGTGAGASDERERNVGRLITAYRARGHLGAQLDPLGLVPPVNPPDLDLPFHSLSQADLDSEFSTGGVGGQPRMKLKDLLTRLKATYASSIGAEFMHIQEFDQRQWIYKRLEDAGGKIAGDAASRKRTLERLTAAEGLERYLHTKYVGQKRFSLEGGDSLIPMMDEIIRQSGNDQVKDIVIGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHAHDDRAHTGDVKYHMGFSADIAVGTDKQVHLALAFNPSHLEIVDPVVVGSVRSRQERFGDAERKSVLPILIHGDAAFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTSTRDDARSTLYCTDVAKMIGAPVFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEADEPAATQPVMYQTIRKHKTTRELYAAKLESEGVLSADEAKALVDGYRNKLDSGEYTTELAKRKPDEFAIDWSKYLVGTAADPVDTRVKRDQLDRLAKLITTIPEGVELHARVAKIYEDRVKMAAGDQPGDWGFAENLAYATLLAEGHKLRLVGQDAGRGTFFHRHAILHDQKTDDYYLPLRQLVQNPEDATVIDSLLSEEAVMGFEYGYSTTDPNALCIWEAQFGDFANGAQVVIDQFIAAGEAKWGRIAGLSLFLPHGYEGQGPEHSSARLERFLQLCALENMLVCVPTTPAQCFHMIRRQMRMTTRKPLVVMTPKSLLRHKLAVSSLEELADGQFQHLIPDAKADAAKVKRVVLCSGKVYYDLLEDQTKRGQDDVAIVRIEQLYPFPRAQLAAELKAYGNATDVVWCQEEPQNQGAWYQIRHHLNFCLAGGQSLHYAGRARSPSPAAGHMADHIIEQQKLVADALLNPFNDQVAE
>NZ_CP017190.1|WP_011346978.1|139732_140719_-|hypothetical-protein
MNAVTNQASPARTFAWLLKREYWEHRGGFVWAQFITGGIAVFFALLGAVIGAISARRNMVGDSITMDDLAEYTRTLGQVGDGLLLGGIGIASVVLAFVVFFYALGSLYDDRRDRSVLFWKSLPVSDVQTVLSKAAWALLLAPLISIAIGAAVGMALWLIAIVGALIAGVPSPWALATHSHPFSLLWLLLKTVPMSLLWALPTVGWLMFCSAWANSKPFLWAVLFPLLACVMLSILSAMPGVSLPIGWIWYIVGYRGLLSALPGTWSPLAVSGNLDSSTLQSPSDLVQWALQHTDSTRVYGSADIWIGAAVGIALIAASIYLRRRRSEA
>NZ_CP017190.1|WP_008578099.1|140715_141591_-|ABC-transporter-ATP-binding-protein
MTAVSSDHVVDARGLRKAYKHRLALDNTSFTIAAGRIIGLIGPNGAGKTTALKAVLGLTDFAGELQVLGMDPRTQRNALMNEVCFIADVAVLPRWLRVGEAIDFVAGVHPRFDRAKCERFLANTQLNRKSRVRELSKGMIVQLHLALVMAIDARILVLDEPTLGLDILYRKQFYQRLLEDYFDEQKTIIVTTHQVEEIEHILTDVMFIRDGRIVLTADMESISERYTEVLVGADQLDAARSLKPIDERGLPFGKTVMLFDGAPKEQLARFGETRNPGLADLFVAVMKGTYA
>NZ_CP017190.1|WP_003483692.1|141587_141950_-|GntR-family-transcriptional-regulator
MNDIQWSDGAPIYRQLKERVIAMMLDGILKPGDALPSVRQVAADYQLNPITVSRAYQELADENLVEKRRGLGMFMTPEAAQKLRGSERERFLNEEWPAVLERIQRLGLSIDDLLPQGKTP
>NZ_CP017190.1|WP_074038585.1|141952_142201_-|hypothetical-protein
MNSTRLTRPVPLLLFGSTLFAIGCLGAASSQVTESDADYGVSEAVTENATTPPEARSRPGRHVRASLSMPYFSFAQALRPRS
>NZ_CP017190.1|WP_011346979.1|142333_142891_+|glutathione-peroxidase
MLLNRLLALVLTGFFATSAFAAGTPVLDVEYRPLAGKTPINLNRTYGGKVVMVVNTASKCGFTPQYEGLEALNQRFGSRGFTVLGFPSNDFQGQEPGSEKQIQEFCTLTYGVKFPMFEKVHVLGAQATPLYQRLTQATGVAPGWNFHKYLISRDGRVVAQFPSKIKPDDPSVLAAIERELKAPAH
>NZ_CP017190.1|WP_008576520.1|142976_143948_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MKMGKRGAAASLLMVAMSASMPAMSQQPAAAATKEKPALNASSDKSTREDVSYAIGMDVARSFEPIAQDIDVNAMQRAIENAFKGGKPLLSDEQTQATDTALRTALAARNGQQVPGMAPGAAPAAPSKENVGLMLGDRAVGPSLAGIKDEIDLSILMEAVRTVFAKGTTRLTQQEAAATMQAFASAKQGAAAANNRKQGNEFLAKNKTEKGVITTASGLQYMVLRQGSGERPMRTSKVRVNYEGKLLNGQVFDSSYQRGQPAEFGLDQVIPGWTEGVALMPVGSKYRFWIPSNLAYGPNGTQGGPIGPDATLTFDVELMGILP
>NZ_CP017190.1|WP_008576522.1|143973_145323_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MRVAIFGTGYVGLVTGACLAEVGHQVVCVDIDQAKLDALNRGLIPIYEPGLEPMVKANHAAGRLRFTSDAAAAIAHGEITFIAVGTPADQDGSADLQYVLAVARTVGRHIDGPAIVVNKSTVPVGTADIVRVAIQEELAARGVAHEVDVVSNPEFLKEGDAVADCMRPDRIVIGAKKPAAIARMRRLYAPFNRNRDRIVEMDVRSAELTKYAANAMLATKISFMNEIATIAERVGADVEHVRNGIGSDPRIGWHFIYPGAGYGGSCFPKDVQALAKTAEQYGMRPTLLEAVESVNNAQKGHLFELVQRHYGAEGTGSVAGKTFAVWGLAFKPNTDDMRAASSRRLMEQLWEAGATVRAYDPEATREARRIFGERDDLAYCDDAFSALEGADALVVVTEWKQFRSPDFGKIKQALKDDVVFDGRNLYDPQEIEAAGLAYYAIGRGRSLYA
>NZ_CP017190.1|WP_008576524.1|145315_145552_+|protein-SlyX
MHEQLPLHDRALEARLIELETRLSFQEQALNELSEALADARLTGARNAELIRHLLEDLGKVRSTLFADAADEPPPPHY
>NZ_CP017190.1|WP_039416420.1|145552_146305_+|DUF2058-family-protein
MQIAAAMSDTLRDQLLGLGFKSAPKPERKPDARPAARAHGNGGKPAPGGNRPGQGRGPQRPHAAAATDGNGERKPAGRPERRHDGKPGAAPRPQHAAADRRGPRPARTREDIDLAKAYAIRAQREKDERIEAERVKQEEARLRHEAKAKLEALVKDKGLNDAAADIARHFPYGGKIKRIYVTADQLKALNAGELGVLQLNGRYLLVTAELLAEAEAVFAPSVALKVDPNAPAGDDPYADPKYQVPDDLVW
>NZ_CP017190.1|WP_011346981.1|146647_147481_+|transporter
MSLSSKFLKSNVVAAVDSRALSRVPVQAPRRTASALVMLALCVASGHAAAQADDAPAFDRPGIPFAAEALQPGAFAWEQGLPDASTDRSDGQRTTQYTADTLLRLGLFQNVELQLGSDSYNWQHGGGMRVRGGGDSSVGLKVALPSRSESFHWAALGTYSIPTGSPAFSDGYSRELGVTASWDLAQQRAIALYVNYARDDDGHTWTFAPNYTFFSGDHFSSYVEAGVDTGSAHSRVAGAGGAWQLPHAMQLDVSVLRGLTSESPDWQGGIGLSIAFE

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Crispr_ID: NZ_CP017190_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017190_2

787280-787350

Orphan

Consensus_repeat	Method
CCGAACTCAAGGTTCATCTCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017190_2

>merge|NZ_CP017190|2|787280-787350|CRISPRCasFinder
CCGAACTCAAGGTTCATCTCTGCAATTACCGTGGTTTCAGGTAAAGAGCCGAACTCAAGGCTCATCTCTGC

>NZ_CP017190|2|1|787280-787350|CRISPRCasFinder
CCGAACTCAAGGTTCATCTCTGC	AATTACCGTGGTTTCAGGTAAAGAG
CCGAACTCAAGGCTCATCTCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017190.1\|WP_011347362.1\|791062_791602_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_011347355.1\|782691_785430_+\|type-VI-secretion-system-ATPase-TssH	unknown	unknown	gnl\|CDD\|274528
NZ_CP017190.1\|WP_011347366.1\|795639_799098_+\|type-VI-secretion-system-membrane-subunit-TssM	unknown	unknown	gnl\|CDD\|274531
NZ_CP017190.1\|WP_039417400.1\|789116_791054_+\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP017190.1\|WP_011347351.1\|775828_776335_+\|type-VI-secretion-system-contractile-sheath-small-subunit	unknown	unknown	gnl\|CDD\|226047
NZ_CP017190.1\|WP_011347368.1\|799744_800467_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP017190.1\|WP_008571949.1\|779301_779805_+\|type-VI-secretion-system-baseplate-subunit-TssE	unknown	unknown	gnl\|CDD\|226049
NZ_CP017190.1\|WP_011347367.1\|799094_799748_+\|type-VI-secretion-system-associated-protein-TagF	unknown	unknown	gnl\|CDD\|132416
NZ_CP017190.1\|WP_039417406.1\|785441_785891_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_039416769.1\|776327_777845_+\|type-VI-secretion-system-contractile-sheath-large-subunit	unknown	unknown	gnl\|CDD\|226048
NZ_CP017190.1\|WP_011347357.1\|786082_786631_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_039417404.1\|787712_787910_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_011347364.1\|792980_794318_+\|type-VI-secretion-system-baseplate-subunit-TssK	unknown	unknown	gnl\|CDD\|274536
NZ_CP017190.1\|WP_008571950.1\|779807_781685_+\|type-VI-secretion-system-baseplate-subunit-TssF	unknown	unknown	gnl\|CDD\|377574
NZ_CP017190.1\|WP_011347365.1\|794319_795636_+\|type-VI-secretion-system-protein-TssL	unknown	unknown	gnl\|CDD\|180801
NZ_CP017190.1\|WP_011347363.1\|791598_792984_+\|type-VI-secretion-system-associated-FHA-domain-protein-TagH	unknown	unknown	gnl\|CDD\|274537
NZ_CP017190.1\|WP_039416793.1\|778480_779314_+\|ImpE-protein	unknown	unknown	gnl\|CDD\|226862
NZ_CP017190.1\|WP_008571946.1\|777944_778448_+\|type-VI-secretion-system-tube-protein-Hcp	unknown	unknown	gnl\|CDD\|377536
NZ_CP017190.1\|WP_039417412.1\|788553_788940_+\|TIR-domain-containing-protein	unknown	unknown	gnl\|CDD\|379328
NZ_CP017190.1\|WP_011347354.1\|781648_782659_+\|type-VI-secretion-system-baseplate-subunit-TssG	unknown	unknown	gnl\|CDD\|274530

Protein	Function_ID	Function_description	E-value
NZ_CP017190.1\|WP_011347355.1\|782691_785430_+\|type-VI-secretion-system-ATPase-TssH	gnl\|CDD\|274528	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP017190.1\|WP_011347366.1\|795639_799098_+\|type-VI-secretion-system-membrane-subunit-TssM	gnl\|CDD\|274531	TIGR03348, VI_IcmF, type VI secretion protein IcmF. Members of this protein family are IcmF homologs and tend to be associated with type VI secretion systems. [Cellular processes, Pathogenesis].	0
NZ_CP017190.1\|WP_039417400.1\|789116_791054_+\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
NZ_CP017190.1\|WP_011347351.1\|775828_776335_+\|type-VI-secretion-system-contractile-sheath-small-subunit	gnl\|CDD\|226047	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	1.1132e-70
NZ_CP017190.1\|WP_008571949.1\|779301_779805_+\|type-VI-secretion-system-baseplate-subunit-TssE	gnl\|CDD\|226049	COG3518, COG3518, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	1.43912e-26
NZ_CP017190.1\|WP_011347367.1\|799094_799748_+\|type-VI-secretion-system-associated-protein-TagF	gnl\|CDD\|132416	TIGR03373, VI_minor_4, type VI secretion-associated protein, BMA_A0400 family. Members of this protein family are found exclusively, although not universally, in bacterial species that possess a type VI secretion system. Genes are found in type VI secretion-associated gene clusters. The specific function is unknown. This model represents the rather well-conserved amino-terminal domain of a protein family in which carboxy-terminal regions, when present, show little conservation. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	6.09546e-32
NZ_CP017190.1\|WP_011347363.1\|791598_792984_+\|type-VI-secretion-system-associated-FHA-domain-protein-TagH	gnl\|CDD\|274537	TIGR03354, VI_FHA, type VI secretion system FHA domain protein. Members of this protein family are FHA (forkhead-associated) domain-containing proteins that are part of type VI secretion loci in a considerable number of bacteria, most of which are known pathogens. Species include Pseudomonas aeruginosa PAO1, Aeromonas hydrophila, Yersinia pestis, Burkholderia mallei, etc. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.58092e-106
NZ_CP017190.1\|WP_039416769.1\|776327_777845_+\|type-VI-secretion-system-contractile-sheath-large-subunit	gnl\|CDD\|226048	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	0
NZ_CP017190.1\|WP_011347368.1\|799744_800467_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.27805e-46
NZ_CP017190.1\|WP_011347364.1\|792980_794318_+\|type-VI-secretion-system-baseplate-subunit-TssK	gnl\|CDD\|274536	TIGR03353, VI_chp_4, type VI secretion protein, VC_A0114 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	3.41924e-180
NZ_CP017190.1\|WP_008571950.1\|779807_781685_+\|type-VI-secretion-system-baseplate-subunit-TssF	gnl\|CDD\|377574	pfam05947, T6SS_TssF, Type VI secretion system, TssF. This is a family of Gram-negative bacterial proteins that form part of the type VI pathogenicity secretion system (T6SS), including TssF. TssF is homologs to phage tail proteins and is required for proper assembly of the Hcp tube (the T6SS inner tube) in bacteria.	0
NZ_CP017190.1\|WP_011347365.1\|794319_795636_+\|type-VI-secretion-system-protein-TssL	gnl\|CDD\|180801	PRK07033, PRK07033, DotU family type VI secretion system protein.	1.05452e-111
NZ_CP017190.1\|WP_039416793.1\|778480_779314_+\|ImpE-protein	gnl\|CDD\|226862	COG4455, ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only].	4.22571e-59
NZ_CP017190.1\|WP_008571946.1\|777944_778448_+\|type-VI-secretion-system-tube-protein-Hcp	gnl\|CDD\|377536	pfam05638, T6SS_HCP, Type VI secretion system effector, Hcp. HCP is a family of proteins which are expressed in up to 1000 copies in Gram-negative bacteria. Together these copies aggregate into a needle-like shaft or tube that will penetrate other bacteria via a puncturing protein attached to its head. Initially Hcp forms a hexameric structure with a central channel of 40 Angstroms. These hexamers pile up one on top of each other forming nanotubes resembling the gp19 tail phage tube.	9.43242e-31
NZ_CP017190.1\|WP_039417412.1\|788553_788940_+\|TIR-domain-containing-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	0.000451428
NZ_CP017190.1\|WP_011347354.1\|781648_782659_+\|type-VI-secretion-system-baseplate-subunit-TssG	gnl\|CDD\|274530	TIGR03347, VI_chp_1, type VI secretion protein, VC_A0111 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.02976e-116

>NZ_CP017190.1|WP_011347357.1|786082_786631_+|hypothetical-protein
MVNAKYITEETAAHGRVLAFPNVSSCVAVVVVLPDELVGWHVTVKTLDSIDKGMAAQGAAKFLDYARSGTPRRLLIVGHFTHHDPTALRDWVRAQLAVDLPTQSFDITRHRKAETNVAYHLFFEHNGHDIPQITFKNSTKVGVSNVTNGESGVPNGGLPVHNRSADFTVSRWHRLRRHFVDV
>NZ_CP017190.1|WP_039417406.1|785441_785891_+|hypothetical-protein
MVAKATVYLNGIEYGSSDAAMGGGRRGGPVNDLADHAERKAWREAWPRICREVRATADGTPFEITIEVNMTICADCQKWMIVEVRRHLGQLGRAFTFYATVGKEKPVVVARDTVWNAKVGQCRLWKADRSDLQMGRVRKHEVIYEKTRG
>NZ_CP017190.1|WP_011347355.1|782691_785430_+|type-VI-secretion-system-ATPase-TssH
MADISRAALFGKLNKTTYRGIESATAFCRLRGDREVDLLHWLHQLLQAQDGDLHRIVRHFSLDAARLALDLTAALDRLPRGGGGHFDLSASVEEAVERAWVHCTLRYGRQRIRGGDLLVAILHTRSLRNGLLAMSSEFGKLRAEALADDLDAIVAGSPEDDATDIAAASAPAGPAAAGGTAALALYTVDLTAQAREGKLDPIIGRDDEIRQVVDILMRRRQNNPILVGEAGVGKTAVVEGFAQRIARGDVPPALKDVQLRTLDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPIILFVDETHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTFAEYKKYIEKDPALTRRFQAVQVDEPDEAKAVRMMRGVASMMEQHHRVQILDEALEAAVKLSHRYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRRRIESLETEHAIIERERAIGIVVEERAAACANLLQSEHSRLRELDQRWVGEKALVDELLSLRAQLRSSNSSVEGTGSALEAEADTDADAAADAAVAQSASGDTAVLDAPVQVDRDTLLARLQLVQAELAALQGESPLILPTVDYQAVAAVVADWTGIPVGRMARNEIDTVLRLPDLLAKRVIGQDHAMEMIAKRIQTSRAGLDNPDKPIGVFLLAGTSGVGKTETALALAETLYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAGTDLIASLCKDPELIPDPEAMAKAIREPLLKVFPPALLGRLVAIPYYPLSNDMLGQIVRLQLNRIKKRIEERYKIPFEYDHSVVELVVSRCTESESGGRMIDAILTNSMLPEISRQFLTRVIEGKKINHSRASAVADGFFYEF
>NZ_CP017190.1|WP_011347354.1|781648_782659_+|type-VI-secretion-system-baseplate-subunit-TssG
MASPSRQSADPVALLAHLEAQPQDFELFEALRRLECEHPAQPRLGQAARPLEEPVRLGQRASLEFPPRDIDSLQPGPDGLPPTLRTLALGLFGPHGALPLHLTEHAIEREGAGDPTFAAFADIFHHRMIALWYRAWADARPTVQMDRPGEDRFGARLDALTGVDQPALRGRDAMPLAARRHFAGRFVAQARNAEGLRAVLIGLFDVSVQVQEFVANWLPLPEEGRLRMGRAAARMGRDATLGASARNAQHRFRLRIGPLEIARYREFLPGGPALEVLTAAVRGYVGDEQAWDLQLVLAREDVPLPLMGQGQRIGLSLWLGHYRRPRDADQLVLAPS
>NZ_CP017190.1|WP_008571950.1|779807_781685_+|type-VI-secretion-system-baseplate-subunit-TssF
MDPRLLHHYNRELQHVREMGAEFAQAYPKVAGRLGMSGIECADPYVERLLEGFAFLSARVQLELEAQQPVFAQHLMDMLYPHFLSPVPSMAVVELQPEQGEGIGPAGHLVPRGSALRSLIGHGDRTACEYRTAHAVTLWPLRLTAASYLASPAALATLGVPVESRARAGLRLVFTVNAGLRLDMLALDTLPIFITGADGLAGSLYEQLHANALGFVVRARAADGQVLSRNFGPEHLQPQGFDDEQALLPRSERSFSGYRLLQEYFACPERFLFAAFDGLAQVLPRAACTEFEIVVWFDRAVERLDNAVDASNFRLHCTPAINLFPRRGDRIHLQPGICEHHVLADRTRPMDFEIHGVEQVEGFGDGNTPMQRFEPFYGAQPRSWHERRSAFYALRRQPRRLSTGQRRTGPRSSYVGSEVFLSLVDGDQAPYPHQLRQLGMQLWCSNRDLPLHMPVGKSSTDFVLDDGGPVAAIRCVAGPTRPRSGVTAGDTRWRLISHLQLNYLSLLEAGDDGATAVREMLTLYHDPHDAAARRQVEGVRRIASRPIVRRIPVPGPATYGRGLEITLTCDDAAFEGQGVYLLASVLRHVFARQASLNSFTETVLCTLERNEVVRWPAHLGNRPIL
>NZ_CP017190.1|WP_008571949.1|779301_779805_+|type-VI-secretion-system-baseplate-subunit-TssE
MAELTQQERLQPSLLDRLIDDRRHELAESRDARAIGPAKLRDCVMRDLTWLLNCTRHWHEDALQAYPHVATSVLNYGIPDLAGARLAGLDVVELQNRIHAAIVAFEPRLAAASLQVTAKVDTGRMDRMSLSFVIDSELWAQPLPLALYLRTDLDLETGRFSLSSGAH
>NZ_CP017190.1|WP_039416793.1|778480_779314_+|ImpE-protein
MSTVHPEHACARLIKADNPEASLATAKEWVRQCPADAQARIGLFQLLAVVGDWERARQQLLLAADLDQAWIGVAGAYACILDAEREREQVLAGRMMPLMPGQVPQWQHDLLQALQHDRDGEPAQAARRRALALTQADAIAGHVDGERFDWLADADPRFGPCLEVILEAGYAWLPFAQLRSLRFEVPGSLRDMLWQSVEIQWRDGTHSRGVVPCRYPGSHHSDDGAIRLGKRITWQGEDLSACGLGQRLLAGSEDDYPLLDIRHIAFDTAAVAAPWPN
>NZ_CP017190.1|WP_008571946.1|777944_778448_+|type-VI-secretion-system-tube-protein-Hcp
MAFDMHLKFGSGDVEIKGASNHSKHKDEVPIIAWSWGTSNTGNLHTGAGYAAGGKANVQDISVTKYVDSCSNALLNACCTGARVDSATLYVTNATGEQTDYVTIELSEGVMITSVSTGGSGGEDRLTENVTLHFGKFKYSFQPQDDKGKKQGGTKDFTFNMQEVKKS
>NZ_CP017190.1|WP_039416769.1|776327_777845_+|type-VI-secretion-system-contractile-sheath-large-subunit
MSNPMATQNSSATQDLADAQPLTSQSDDFAALLTREFRPRSERAGEEVRLAVRTLAEQVLERSDIISDDLAQTINAYVAEIDRKITEQLNLILHAPHFQALEGAWRGLHYLVSNTESDTQLKIRVLNVSKKELAKNLKRFKGTAWDQSPVFKKIYEAEYGQLGGEPYGCLIGDYHFDHSPQDVDTLRGISQIAAASHAPFIAAAGPGLMGMESWSELSNPRDLAKIFSTPDYAAWRSLRQSEDAKYLALAMPRTLARLPYGAKTDPVEAFDFEEDTQGADSSRYTWQNAAYAMAVNINRSFKQYGWCTRIRGVESGGAVEGLPTHTFPADDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNTDMAAFIGAQSLGKPEEYDDPDATANAALSARLPYMFACCRFAHYLKCIVRDKIGSFSTRQQMQSWLTDWVMNYVDGDPANSSEETKARKPLAAAEVVVEEVEGNPGYYTSKFYLRPHYQLEGLTVSLRLVSRLPSAQAA
>NZ_CP017190.1|WP_011347351.1|775828_776335_+|type-VI-secretion-system-contractile-sheath-small-subunit
MSVRSSSQKFIARNRAPRVQIEYDVEIYGSQKKVQVPFVMGVLSDLSGANTENLPALEARDAVEIDIDNFDSRLRAMQPRVAMSVSNTLTGSGELPVDITFDSLDDFSPTAVVKTVAPLAELLEARTQLANLGTYLDGKAGAERLIADAIKDPTLLRSLVAAPKSTDE
>NZ_CP017190.1|WP_039417404.1|787712_787910_+|hypothetical-protein
MPFTYTHWIQQASRVLHPCSAELPALDILIDAYGRTPSENNLRCLKNAFRPWRDAQGEGDAWIDS
>NZ_CP017190.1|WP_039417412.1|788553_788940_+|TIR-domain-containing-protein
MRSPTGAMPIGAMREDWNALYQAAMRQAQLMLFCYTDEFRDSQWCRQEWDQFIGQKAGRPADRQLRGLILEFTTDACTLPGSRGDGVTRIPVAKTDGGRCGLAWDKGDYILSSTDYARVLAQIQQLIR
>NZ_CP017190.1|WP_039417400.1|789116_791054_+|type-VI-secretion-system-tip-protein-VgrG
MAHAITLQSPLGKTLRFVRMSAHEALGRPYAFVLHGISRDVAIDLRALLGKPMAVKVTSPQGYVRHYHGIVAEAEQTGFEQIEGLRYATYAFSLVPKLWLLGQRRDCRIYKNKSVPELVRALLADVGCTDVKLRLSASYRPREYCVQYRESGLDFVSRLMEQEGIYYYFEHSASTHTLVLADSLGGHEAVAPFAQIPYCPPGQKGSRMKDAITDWSLARSAHSTRVRLDDYDYLKPKASLRVNETPAESSGPALGELEVFDYPGEHLDIAAGRRHAQVRAEALNVAQAQYQGWTDACGLQVGALFKLRDFPLAEHNQEYLVTSANTELVEVDYVSGGETVAEPFASTFRALRSRQPYRSPQTTPRPSIAGLQTAVVDGKTPEDIAVDQHGRVQVNFFWSPPGTPNAYCSCPVRVAQAWAGKRWGAQHIPRVGQEVVVSFLEGNPDRPLIIGSVYNADQMPPYALPEHRTRSGVKSRSLLGGAEDYNEIRFDDKKGNEELLLHAQRDLRHEVENDHFVTVDRNETAEVKRERSHTVGGNDRLDVGKALRIQAGSEIELVTGMARLQLKASGEIVLSGTRLTLDGRVSVGIQGGVSVDVSAMANLTLRSNASVLLQSNAVTTARANAALLLQSSGPAVLKGTPPIIA
>NZ_CP017190.1|WP_011347362.1|791062_791602_+|hypothetical-protein
MLQILPAARQMRLSPCAHAALAPDMAPETAVRELLARGLAQDALPLALRLLPRPYAVAWLCQCMRAQTLSGHDSEGLRLAQAWVQQPGPTQRESARAFAADDDYQSVGAWLAAAAAWSDGSLSEEDGPPVADHLTAAAAVAALLHLAGREPATFEAQLVRWSEDAARLLSGLRVRERTP
>NZ_CP017190.1|WP_011347363.1|791598_792984_+|type-VI-secretion-system-associated-FHA-domain-protein-TagH
MSAVSPRLTLTVRDAQAVSGSRPPQASFAAEGGRIGRDASCDWVLEGEGVSRLHASVRYLDGVYFIEDHSTNGVLHNGVPLRAGFPVPLHAGDALRIDAFEIDVAVEGAGVTAVPAATQTWNHAEPWTLSPTPPPQPSQQPPLERERDVFAELGAASTQPADTDPLALFATSFTLAGSQGDAAAFGLGHAPAMADAYRAPVAVPAAAGVVLPEHWDLTRSEFALPPAADAIAAVQRPLQPAPVSVVAAAPAPTPTPMPMPASASEVAPASTSTTVPTAAQPVVAQSPDAPELPALFAAMTAGLMDVLRARAELKNSLRLPVTLIQRTENNPLKFAATVDEAVARLLAPAGPGYLTGAAAIDEAMEDIGRHQVALLAGMRAAFEHVFTQFDPARFEADAAGHSALAAWGNRPWRRYAQHYRELLGDPDERFRRLFGEEFARAYEQQLARAKTQAQPADGDRA
>NZ_CP017190.1|WP_011347364.1|792980_794318_+|type-VI-secretion-system-baseplate-subunit-TssK
MTPYNKVIWSEGLFLRPQHMQQQERYLERYMELQAGALRPHAWGFSQLELEPELLAIGKLGIRRARGCFPDGTPFSIPDRDPAPPALDVPANCRDQVVSLALPLRATAQPDSAWPDGDGSRLARYRVGEAEVGDASGSIAGTVLLEVGVLASRLRLQSEPGEGLVEVPMARIVECRADRRVILDDAFIPTASRIEGAARLSTLLAELLGLLHQRGQALAERVAGSDRGGVAEIADVLMLQVINRYQPLVAHWASAPLEHPEALYCVLLGMAGELATFTRASKRSGPFPPYAHDALQASFEPVVASLRESLSAVLEQSAIAVPLQQRKYGVWVGMVPDPALLDSAAFVLAVKADLRAEDLRKRLPTESKIGPVEKIRDLVNLQLPGVAVSALAMAPRQVPYHAGCAYFELDRQSSLWKTLRTSGGVALHFGSGFPGLELELWAVRN
>NZ_CP017190.1|WP_011347365.1|794319_795636_+|type-VI-secretion-system-protein-TssL
MSNTVDQHDDDATVVRSATPAPRPAAATPARQATTRTVQPPDLDAAMRAAPGAMQGNAVVRAATPLLLLAVQLRHSTQTPDIATLREHCSTRLQRFEQELRQQGIDDKTGIAARYVLCTLLDEAVLAAPWGEGSGWSQRTLLVTFHGETYGGAKVFDLLDRLARDPARHLDLLELLYLALALGFGGRYRVEQGGRARLADRQAELYQLIQRQRLPAPAELSPNWQGAQAPLLRNTAATPLWIATLASLCIVLLAFVWLHARLNALTAPISAQLARIGLERVTLPIPAAATPATSAALAPLLAAEQRAGWLTVQTEGDGRSTVRLASASMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAQSVGAVLAAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILLIPET
>NZ_CP017190.1|WP_011347366.1|795639_799098_+|type-VI-secretion-system-membrane-subunit-TssM
MRLVLDFLRTRYVASAAVLALLAMLVWVGGPYLSVGRLQPLASVSGRLLAVAVLLLVWAGWRYLRWRRDNAKQQRMAGELVGQGASAEDASGNDSRARAAQEQVRLRARFAEAMAVLRRRRRNGPGLHVLPWYLLIGAPGSGKSTLLQSSGLEFPLKEHGNHAALEGVGGTRNCDWWFADQAVFLDSAGRYTTQDSDAIADAGAWHGFLDLLRRHRRQPLNGVIVTVSVAELLELDGDAGLSHARAVRHRLDELVDKLRARVPVYLVVTKCDLVSGFAEFFADLDAAGRAQVWGVSFPQAQAADDTDPLTPFPTELERLLERIDQRVLERLHRARDARERAAVLSFPQQLRLLQPALMEFVQTAFGRHGYAGQPWLRGVYLSSGTQQGHPIDRVISAVARHFGVAAAGLPPAISAPRSYFLPRLLNDVVFAEAGLAGSQPGSAQRRRLLQLACWAVLTATTLGVLSGMAGSYARNVQLIGQVRDALDAYPAGALPADAGEAAFYAKALQRFDALARARDVALPPGQSIPWSRRFGLHQGRALARDVQDAYLRDLNGALLPALAQSLRRKLEQASNDPQRLYPLLKGYLMLGDPARRDVLHLATLAGTVWRQIFPDDASVRAGLNRHLRALLGPVDGARALALDRQQIEQTRASLRTAELPALVYGGLKLTQPGVDAGQAPRLDRRLGLLGDVFERRSGLPLSAPLPPLFTRQAFQAQTGGGIARGVQQFLADDWVLGTAPLDPLARSQLERQVLALYQRDYIAAWDSLLADLVLRPVTQTGQASAVAAKLGGPASPLKALLVLLREHTHALGRTPPAKGGASAAAGGEATAAAEPDVAADPIERHFEPLNRLLDGGPGASALDETLAALTQMSRTLLGAAAGVAADQNDPALLIAAQQAEQLPPPLGNWMATLSGRGRALTASSAGEALRNAQRQAAGRECALLVSGRFPFVPGSRNDIPLRDFAELFGPGGRMDRFAQQSLLGKVDTSGRRWQWNPGMAAVGADDVLERAQLADEIKQAFFAGGGAQPQVAFTVSIPPQAAISRLQLEVDGQTLEVREGARASQSMTWPGPNPGLVRVAAWDASGQALPVLEYRGPWAWFRALQAGRLRRSGDLDYTASLALGSATVRMDVQPASLRHPFAASAVQRFSCP
>NZ_CP017190.1|WP_011347367.1|799094_799748_+|type-VI-secretion-system-associated-protein-TagF
MSAMQRPPGFYGKLPAVGDFVHRRLPESFVDPWHVAMQDVLSAAGAVSRAPEGQAPVWRFVLPTGLAGTAAWAGAMRASVDRVGRAFPLVIAAPLPAGDAGGTTAAVMPTYLHLPTWLDAADTVLCNIGAERRQDGAWLDRVCVTLAQQAHDETTMSASPPLSAGAITAGSSLWWTAMTGSAPGAWMQFAGWPAACHAHVLLGALQTANACVAEDMQ
>NZ_CP017190.1|WP_011347368.1|799744_800467_+|serine/threonine-protein-phosphatase
MSACYVSAGRTEQGNVRRQNEDAILLRDDLGLWAVADGLGGHSAGDLASRMVVDVLGALRRDGDLASFVDAIDAQLSQVNQQLRALARARRVDVIASTVVVLVHDHDLLMCGWVGDSRAYAFEEGQLQLLTRDHVAGDKDELTQVGRAQPAGGALTRAIGADDALYVDWVVRARRPGQHYLLCSDGINKELSDDEIAAHCRREQQPAALVARLFDTALGRAGRDNVSAVALRLAPRNAPP

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Crispr_ID: NZ_CP017190_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017190_3

1217332-1217403

Orphan

Consensus_repeat	Method
GCGGGCTGTTGCGAGGGACTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017190_3

>merge|NZ_CP017190|3|1217332-1217403|CRISPRCasFinder
GCGGGCTGTTGCGAGGGACTCGCTTCGTTAAATCCCCGCACATGGATGTGCAGGCTGTTGCGAGGGACTCGC

>NZ_CP017190|3|2|1217332-1217403|CRISPRCasFinder
GCGGGCTGTTGCGAGGGACTCGC	TTCGTTAAATCCCCGCACATGGATGT
GCAGGCTGTTGCGAGGGACTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017190.1\|WP_008573399.1\|1220356_1221457_-\|acetylornithine-deacetylase	unknown	unknown	gnl\|CDD\|181544
NZ_CP017190.1\|WP_074038533.1\|1224789_1225305_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_011347701.1\|1215724_1215985_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367663
NZ_CP017190.1\|WP_080955575.1\|1207155_1208421_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340897
NZ_CP017190.1\|WP_011347697.1\|1208401_1210315_-\|CocE/NonD-family-hydrolase	unknown	unknown	gnl\|CDD\|225487
NZ_CP017190.1\|WP_011347699.1\|1213151_1214396_-\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP017190.1\|WP_011347706.1\|1223445_1224477_-\|N-acetylornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235304
NZ_CP017190.1\|WP_011347702.1\|1215981_1217280_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP017190.1\|WP_008573394.1\|1217404_1218355_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|273832
NZ_CP017190.1\|WP_014090334.1\|1203946_1205569_+\|cytochrome-bd-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
NZ_CP017190.1\|WP_011347705.1\|1222155_1223391_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235305
NZ_CP017190.1\|WP_008573408.1\|1227151_1227589_+\|SufE-family-protein	unknown	unknown	gnl\|CDD\|376883
NZ_CP017190.1\|WP_011347703.1\|1218351_1218963_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP017190.1\|WP_011347698.1\|1210639_1213051_+\|glycoside-hydrolase-family-95-protein	unknown	unknown	gnl\|CDD\|379625
NZ_CP017190.1\|WP_014090341.1\|1218968_1220312_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|235306
NZ_CP017190.1\|WP_011347694.1\|1205585_1206737_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NZ_CP017190.1\|WP_011347708.1\|1225455_1226886_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP017190.1\|WP_011347704.1\|1221462_1221915_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP017190.1\|WP_008573380.1\|1206825_1206936_+\|cytochrome-bd-I-oxidase-subunit-CydX	unknown	unknown	gnl\|CDD\|369733
NZ_CP017190.1\|WP_011347700.1\|1214556_1215711_-\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460

Protein	Function_ID	Function_description	E-value
NZ_CP017190.1\|WP_008573399.1\|1220356_1221457_-\|acetylornithine-deacetylase	gnl\|CDD\|181544	PRK08737, PRK08737, acetylornithine deacetylase; Provisional.	0
NZ_CP017190.1\|WP_011347701.1\|1215724_1215985_-\|hypothetical-protein	gnl\|CDD\|367663	pfam03795, YCII, YCII-related domain. The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. This family also now includes the family formerly known as the DGPF domain (COG3795). Although its function is unknown it is found fused to a sigma-70 factor family domain in CC_1329. Suggesting that this domain plays a role in transcription initiation (Bateman A per. obs.). This domain is named after the most conserved motif in the alignment.	1.34791e-07
NZ_CP017190.1\|WP_080955575.1\|1207155_1208421_+\|MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.75945e-111
NZ_CP017190.1\|WP_011347697.1\|1208401_1210315_-\|CocE/NonD-family-hydrolase	gnl\|CDD\|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	3.32323e-150
NZ_CP017190.1\|WP_011347699.1\|1213151_1214396_-\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP017190.1\|WP_011347706.1\|1223445_1224477_-\|N-acetylornithine-carbamoyltransferase	gnl\|CDD\|235304	PRK04523, PRK04523, N-acetylornithine carbamoyltransferase; Reviewed.	0
NZ_CP017190.1\|WP_011347702.1\|1215981_1217280_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	2.21237e-162
NZ_CP017190.1\|WP_008573394.1\|1217404_1218355_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|273832	TIGR01850, N-acetyl-gamma-glutamyl-phosphate_reductase, N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. [Amino acid biosynthesis, Glutamate family].	8.44626e-138
NZ_CP017190.1\|WP_014090334.1\|1203946_1205569_+\|cytochrome-bd-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
NZ_CP017190.1\|WP_011347705.1\|1222155_1223391_-\|argininosuccinate-synthase	gnl\|CDD\|235305	PRK04527, PRK04527, argininosuccinate synthase; Provisional.	0
NZ_CP017190.1\|WP_008573408.1\|1227151_1227589_+\|SufE-family-protein	gnl\|CDD\|376883	pfam02657, SufE, Fe-S metabolism associated domain. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export).	1.26168e-61
NZ_CP017190.1\|WP_011347703.1\|1218351_1218963_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	5.16119e-22
NZ_CP017190.1\|WP_011347698.1\|1210639_1213051_+\|glycoside-hydrolase-family-95-protein	gnl\|CDD\|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	6.40273e-41
NZ_CP017190.1\|WP_014090341.1\|1218968_1220312_-\|acetylglutamate-kinase	gnl\|CDD\|235306	PRK04531, PRK04531, acetylglutamate kinase; Provisional.	0
NZ_CP017190.1\|WP_011347694.1\|1205585_1206737_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	7.04992e-123
NZ_CP017190.1\|WP_011347708.1\|1225455_1226886_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP017190.1\|WP_011347704.1\|1221462_1221915_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.53301e-11
NZ_CP017190.1\|WP_008573380.1\|1206825_1206936_+\|cytochrome-bd-I-oxidase-subunit-CydX	gnl\|CDD\|369733	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein. This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in E. coli. Members have a consensus motif (MWYFXW) which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to Proteobacteria.	3.97495e-09
NZ_CP017190.1\|WP_011347700.1\|1214556_1215711_-\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0

>NZ_CP017190.1|WP_011347702.1|1215981_1217280_-|argininosuccinate-lyase
MTNLLWQKPGVAVDAKIQSFLAGDDVILDREFFLYDIAASKAHAQGLQHIGILSLQELGGLSEQLDLLAADFRSGAFVLDAQYEDCHSAIEARLTERLGDAGRKIHTGRSRNDQILVATRLWLKDKLQRVATLSAEIAKVALDRAQAEAGLPVPGYTHIQRAVVSSAGMWWAGWAEAFIDNAVRADDTVRLVDSNPLGTAAGYGVNLPLDRAHTTAELGFARLLVSPIYAQLSRGKYELAALEALGSATLDLRRIAWDLSLFTSGEFAFVALPAQYTTGSSIMPNKRNPDVIELMRATHASVAAARTEIEQLLSLPSGYHRDLQSSKGAIVHGFGRGLAALELLPALLANLEWRPDKLRAAIDSGMYATDVAVEAAVAGVPFREAYKAAAQAAETAGQGRTPEGSLAARVSPGAAADLQLDVLQARWQALRA
>NZ_CP017190.1|WP_011347701.1|1215724_1215985_-|hypothetical-protein
MTTRYLVLALRKPGFPADVVQPHLDFLDALRAAGQLELTGGFSDRSGGAYVLVNVATLQEAQQIVARDPLVLRDASALTVYEWNTH
>NZ_CP017190.1|WP_011347700.1|1214556_1215711_-|glutamate-5-kinase
MSTPASTLSPFTEQALPPWRRAVLKVGSSLLAADGGGLSPRFALGLAQFVSANLAAGRELVIVSSGAVAAGRAILPKAADVGAPIAARQALAALGQAQLIALWQRFFERPVAQVLLTHDDLRNRRRYLNARATLGELLRLGALPVINENDTVSVDELKLGDNDNLAAIVAALVDADALFIATDIDGLYSADPRSNPLARPLDDVPELTPEVLAMAGGSGSNVGTGGMRTKLEAAAKAGAAGIETYLFNGRSGEVVRALAQDRLRGTRIHAARARIAARKYWLRHAPVEAGAILIDDGAAAALTGKGASLLPGGVAGAQGDFRRGDMVEIRLRDTAGDQCLARGVSQYSALDIRRIAGRHSREIENVLGYSYGENVVHRDDLVVL
>NZ_CP017190.1|WP_011347699.1|1213151_1214396_-|glutamate-5-semialdehyde-dehydrogenase
MTIKTLALQCRDAAQVVSQLSAPAKHALLDAMAAALEADAAAILAANARDLEAARAKGTGSAMLDRLALDDKRLAGIAAALREVAQLPDPVGRITREDVRPNGIRVQKVRVPLGVIAMIYEARPNVTADAAALCIKAGNGVILRGGSEAIHSNTAIARALQRALREANVPDAALTLVEDLRRETMLELLQLNDIVDLAIPRGGEGLIRFVAEHARVPVIKHYKGVCHLFVDASAEMELALRLLIDGKATRPSACNSLETLLVHAGIAERFLPLAAQALRERKVELRGDAATQAVLPDIAAASDDDYAAEFLDLILAIRVVPDLDTALAHIRQYGSDHTEVIATQDADNAERFVQSLRSAVVMVNASSRFSDGGELGLGAEIGISTTRLHSYGPMGLEALTVERFVVRGEGQVRH
>NZ_CP017190.1|WP_011347698.1|1210639_1213051_+|glycoside-hydrolase-family-95-protein
MRDIPSHACADPHRRRLLTHLGAAALLPLLGRAGSSDATTPPARPTRSPVLPPEHALRLPYAAPAADAQLLREGLPIGNGRLGALCGGAPACETLFVSEGSLWSGGSNAVLQDDGQFAYTKEEFGSFMLLAKLFVELEGHAQAQVFDYQRELDMSNGCVRVRYRIGDTRYTRTLFASHPDAAIVLRLDCEGAGSHRGRIRLIDTHAGAGRADGDAGLRFAGQLDNGLRYAAALRVHSDDGSLETGDGLLQFRDCRGLTIVLCGDTDYAADGARGWRDPTRDPLARARHRAQAAASVPAALLLDTHVADHRALFDTLQVELGQSSDAQRGLETWQRIQARAAAPALPDPELEVAYLQFGRYLTIAASRDGLPTNLQGLWLENNEPPWMSDYHSDVNLQMNYWLADPSGLGTCVDALTRYCLAQLPSWTRITQAHFNDPRNRFRNTSGKIAGWTVAISTNPFGGNGWYWHPAGNAWLCDSLWQHYEFTQNRDDLTRIYPLLKGACQFWQAPLIAMEVTDADGRTRQCLVDDHDWSPEHGPENARGIAYAQELVWTLFGQYRQASALLGRDAAYAATVATLQQRLYLPEISPLSGQLQEWMSPTDLGEAHHRHLSPLMGLFPGHRLHPDLGPPAQVEAARRLLEARGMQSFGWACAWRALCWARLGDAERAYALVLTNLKPSIGHSNGTAPNLFDIYDLSQHGDPTLGGVFQIDANFGTPAAMLEMLLYSRPGQITLLPALPKAWAAQGRVTGLGARGGFTVDMAWRNGVPTQVSVRSVGGTRTRIAWGAQAHDITIARGQVRRVL
>NZ_CP017190.1|WP_011347697.1|1208401_1210315_-|CocE/NonD-family-hydrolase
MRRLAACLLATAIAAATGSAWAQTSPMTPDITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKGARNAPIMLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVKESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDQRNTLNYLVMGPWRHSQVNYDGSALGALNFEGDTARQFRSEVLRPFLDQYLVDGAPKADTPPVFIYNTGENHWDRLKAWPRSCDKGCASSSRPLYLQAGGKLSFQQPVAGQAGFEEYVSDPAKPVPFVPRPVDFADRAMWTTWLVHDQRFVDGRPDVLTFVTEPLTEPLQIAGAPEVHLQASTSGSDSDWVVKLIDVYPEEMASNPKMGGYELPVSLAIFRGRYRESFSTPKPLASNQPLAFQFGLPTANHTFQPGHRVMVQVQSSLFPLYDRNPQTYVPNIFFAKPGDYQKATQRVYVSPEQPSYISLPVR
>NZ_CP017190.1|WP_080955575.1|1207155_1208421_+|MFS-transporter
MSVVTAASSSSAQLRGRGLVLAAILLSAFNLRTAVTSLTPLLERIADEYAFGAPTMGALGMLPTAAFALTGVATPALLRRFGLLRVALLSMALATLGLVLRPLLPGTAGLLVGSLVALAGMGMGNVMLPPLVKRYFGDRVGRVSTLYITVLQVGTLLPALLAVPVADALGWRSSMVAWVLPALLATAAWALVHANHRRIRATGPAPVTPTPEAEGRVARTALGWSMAVTFGMTSLVTYSMFTWLPTLLREAGASPAFGGTMVALFAALGMVGALTMPALAVRMRNPFPIVLLCAACHLVAFAGLWWAPLAAPVLWVTLLGLGPSTFPLALVLVNQRSRTAAGSAALSGFSQGVGYAVSCLGPFLFGWLHAHSGGWTSPFVFLVICLLVQLAAAWVACRPQFLEDAWTPPARGARALNVPAD
>NZ_CP017190.1|WP_008573380.1|1206825_1206936_+|cytochrome-bd-I-oxidase-subunit-CydX
MWYFAWILGTGLAALAAVLNGMWFEAREPERGEPPQ
>NZ_CP017190.1|WP_011347694.1|1205585_1206737_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MDFVLLDYTTLRVIWWLLLGVLLSGYAVMGGFDLGVGALLPFVASNDAERRLVINTVGPVWEGNQVWLILGGGAIFAAFPPLYAVSFSGFYLAMFLILFALILRPVGFKFRGKLVSPRWRSTWDWALFVGGFIPALIMGVAVGNVLLGVPFHFDDSMRTFYTGNLLGLLTPFALLAGLLSVAMLLAHGAAMLVLKTDGPVAERAARFGGIAALCALALFAAGGAWVALGLPGYAVTSVLATDAATNPLGKTAALTAAGGWLHNYSSMPATLMAPLVGLVGLAMSAVCLRLRRGGLAFIASGSAIVGIVFTVGFALFPFLLPSSSAPSASLTVWDASSSRLTLWIMLLATAVFMPIVLAYTSWVYRVLKGKVTDDAVTANPNAY
>NZ_CP017190.1|WP_014090334.1|1203946_1205569_+|cytochrome-bd-oxidase-subunit-I
MIDSTVVELSRLQFAVTAMYHFIFPPLTMGLSFLLGIMESVYVMTGKQIWRRMTMFWGVLFGINFAMGVGTGIVMEFEFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFLGLFFLGWNRLSKVQHLITTWLVALGSNFSALWILIANGWMQNPAGAVFNPDTMRMEVVDFVAVLFNPVAQAKFVHTVSAGYVLGAVFVMSISAFYLLRGKHIEMARRSFAVAAAFGLLSSLSVVVLGDESGYAASEHQKMKLAAIEAMWETEAAPADFTAFGIPNQTTHRNDYAIKIPYLMGLIATRSLDEPIPGILELVGRAEHRIRGGQIAYGALQRIRADKNDAQARKVFDAHWQDLGHGLLLKRYRDDIGNATPEQIAQAAMDTVPRVLPLFWTFRIMAAIGMYLIAFFAVAFWFACKHNFQEKRWFLSLALWTLPLPWIAIECGWFVAEYGRQPWAVEGVLPTFYAASGLDLYEIVMTLVGFTALYTTLLVIAIKLSLKTINKGPEVLFPPMPPNALPAALQDHAPSRHAPLSSGAVAGSAP
>NZ_CP017190.1|WP_008573394.1|1217404_1218355_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MTVEQKTIGIVGARGHTGSELIKLVAAHPQLHLSFVSSRELAGQRVAEHNDAYQGQLRYENLDAAAVAAKAADVVILALPNGMAEPFVAAIDAAAPQTLVIDLSADYRFDPAWYYGLPELTRGSYAGQKRISNPGCYATAMQLTIAPLLDQLAGPPQCFGVSGYSGAGTTPSDKNNPALLSNNVMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIQARYTQRYADEPLIEIVDEAPWVSRIAGKHGVQIGGVTLAPGNKRVVVVATLDNLLKGAATQAMQNLNLALGWDELMAIR
>NZ_CP017190.1|WP_011347703.1|1218351_1218963_-|GNAT-family-N-acetyltransferase
MSVVTLPARWREQPNMRGRHASLEPLQTAHADGLREVVGDGALSRLWYTSVPAPEQVEAYIAAALAACADGAALPYAVRDAAGDIVGCTRYYALDAAVPRLSIGYTWYAPRVQRSGVNTETKLMLLQYAFETLGCLSVVFETSWFNHTSRAAIARLGAKQDGVLRNHARHADGTPRDTVVFSIIDTEWAGVKRHLQFRLEANA
>NZ_CP017190.1|WP_014090341.1|1218968_1220312_-|acetylglutamate-kinase
MSPSAQPHKQTRQTIVRLLSSMASAKEISQYLKRFSQLDAKRFAVVKVGGAVLRDDLDALTSSLSFLQEVGLTPIVLHGAGPQLDAELAAAGIEKHTVNGLRVTSPEALAIVRKVFQASNLKLVEALQQNGARATSITGGVFEAEYLDRDTYGLVGEVKAVNLAPIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDADGKLIDSINLSTEFDHLMQQPWINGGMRVKIEQIKDLLDRLPLESSVSITRPSDLAKELFTHKGSGTLVRRGERVLRATSWDELDLPRLKSLIESSFGRTLVPEYFETTTLLRAYVSENYRAAVILTDEGQFGAGRLTYLDKFAVLDDAQGEGLGRAVWNVMREETPQLFWRSRHNNQVNIFYYAESDGCIKQEKWKVFWYGLENFEQIQHCVAHCATRQPTLLG
>NZ_CP017190.1|WP_008573399.1|1220356_1221457_-|acetylornithine-deacetylase
MTDLLTSTLDHLQALVAFDTRNPPRAIAAQGGIFDYLRAQLPGFQVEVVDHGAGAVSLYAVRGTPKYLFNVHLDTVPDSPHWSADPHAMRRLDDRVVGLGVCDIKGAAAALVAAANAGNGDAAFLFSSDEEANDPRCIAAFLARGVPYEAVLVAEPTMGEAVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGANALDHVQSLAHARFGGLTGLRFNIGRVEGGIKANMIAPAAEVRFGFRPLPSMDVDGLLASFAGFAEPAAAHFEETFRGPSLPSGDIARAEERRLAARDVADALDLPIGNAVDFWTEASLFSAGGYTALVYGPGDIAQAHTADEFVTLAQLQGYAESVHRIINGSH
>NZ_CP017190.1|WP_011347704.1|1221462_1221915_-|GNAT-family-N-acetyltransferase
MEPMPALRISTDKQELDLPLIHRFLSEQAYWCLGIPLDTVQRAIAGSLCFGGYCAGVGQVAFARVITDGATFGYLADVFVLDAHRGRGYGKQLVAAVMAHPHLQGLRRFMLATSDAHALYAQHGFAAPARPQALMEIAYPDLYRTTTTAA
>NZ_CP017190.1|WP_011347705.1|1222155_1223391_-|argininosuccinate-synthase
MSAASTNPESRIPTPGTKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHVTVDGGPAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRAEELGTRIIAHGCTGMGNDQVRFDLAVKALGDYQIVAPIREIQKEHTQTRAYEQKYLEARGFGVRAKQQAYTINENLLGLTMSGGEIDRWEAPGEGARGWCAPRSAWPSEALTVTLKFVEGEAVELDGKPLPGAKILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLITAHRALEDAVLTKQQNRFKPDVARKWVELVYEGFYHDPLKSDIEAFLKSSQSKVNGEVTLETRGGRVDAVAVRSPHLLNTKGATYAQSADWGVEEAEGFIKLFGMSSTLYAQVNR
>NZ_CP017190.1|WP_011347706.1|1223445_1224477_-|N-acetylornithine-carbamoyltransferase
MSLKHFLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGETEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTQDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDQRYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTNNGVFSHCLPLRRNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALASQAGIGNRD
>NZ_CP017190.1|WP_074038533.1|1224789_1225305_-|hypothetical-protein
MRPSPFFMLLCTFAGQVIPAYAAEPDPKNRVVVIENVKLDYAQVLNVEPVYQTLRATRIEEQCEAEQAAQAAAAPAEDEGRINRMVDSVKEMFSRRPEPAAPAAVPPTSTRRNCKVVEVPREFRRPIAFDVDYVYKGTKYRSRLPEDPGNRLRIRVSVTPYIPDAIVAPPR
>NZ_CP017190.1|WP_011347708.1|1225455_1226886_+|cysteine--tRNA-ligase
MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRRYGALRYARNITDVDDKINAAAQAQGVPISTITDRFAAIYRQDMAALGVVPPDIEPEATAHIPQIVAMIEQLIATGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVDVAPYKRDPGDFVLWKPSSDDLPGWPSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDLQFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARHPPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEAESGSDLAVSMTIPAEVESALDDDLNTPLALSVMASIASDARALRSDLMQSGQASARMIELHAARAKLLGAGMALGLLQQDPAAWFSRGTDAGDDARITALVEERSAAKKAKDFARADAIRKQLAEEGIVLEDTPQGVRWKRA
>NZ_CP017190.1|WP_008573408.1|1227151_1227589_+|SufE-family-protein
MTTSPFPLEPTATEAQAAIAEEFSFFGDWSERYQYLIDLGRKLPAFPEQWKTEEHRLHGCQSMVWIVPEGNAERLDFHAVSDSAIVSGLIYLALRVYSGRSAQEILATEPDYIAGIGLAKHLSPTRSNGVAAMLAFIRDTARAQQ

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Crispr_ID: NZ_CP017190_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017190_4

5169326-5169407

Orphan

Consensus_repeat	Method
GCTTTTCCGGGTCCCGGGTCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017190_4

>merge|NZ_CP017190|4|5169326-5169407|CRISPRCasFinder
GCTTTTCCGGGTCCCGGGTCCCGACCTCTAAAGCGGCACCACCAACCTGCCCACTTGCAGCTGTTCCGGGTCCCGGGTCCCG

>NZ_CP017190|4|3|5169326-5169407|CRISPRCasFinder
GCTTTTCCGGGTCCCGGGTCCCG	ACCTCTAAAGCGGCACCACCAACCTGCCCACTTGCA
GCTGTTCCGGGTCCCGGGTCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017190.1\|WP_011346885.1\|5163588_5164344_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|227044
NZ_CP017190.1\|WP_011346891.1\|5176540_5177887_-\|RIP-metalloprotease-RseP	unknown	unknown	gnl\|CDD\|182723
NZ_CP017190.1\|WP_011346889.1\|5171409_5172201_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	unknown	unknown	gnl\|CDD\|235390
NZ_CP017190.1\|WP_008578271.1\|5164401_5165361_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NZ_CP017190.1\|WP_014089738.1\|5160105_5161422_-\|polyhydroxyalkanoate-depolymerase	unknown	unknown	gnl\|CDD\|130908
NZ_CP017190.1\|WP_074038598.1\|5174090_5176544_-\|outer-membrane-protein-assembly-factor-BamA	unknown	unknown	gnl\|CDD\|274514
NZ_CP017190.1\|WP_039418601.1\|5170093_5171380_-\|lipid-A-disaccharide-synthase	unknown	unknown	gnl\|CDD\|234580
NZ_CP017190.1\|WP_008578268.1\|5162398_5162845_+\|membrane-protein	unknown	unknown	gnl\|CDD\|367596
NZ_CP017190.1\|WP_008578264.1\|5158700_5159063_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP017190.1\|WP_011346883.1\|5161722_5162325_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369778
NZ_CP017190.1\|WP_008578263.1\|5156774_5158328_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372583
NZ_CP017190.1\|WP_011346886.1\|5165544_5169135_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_CP017190.1\|WP_003485378.1\|5172226_5172685_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP017190.1\|WP_011346884.1\|5163049_5163499_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017190.1\|WP_008578280.1\|5172681_5173695_-\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	unknown	unknown	gnl\|CDD\|234858
NZ_CP017190.1\|WP_011346882.1\|5159059_5159977_+\|membrane-protein	unknown	unknown	gnl\|CDD\|379374
NZ_CP017190.1\|WP_011346890.1\|5173822_5174014_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017190.1\|WP_011346885.1\|5163588_5164344_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|227044	COG4700, COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown].	2.68018e-60
NZ_CP017190.1\|WP_011346891.1\|5176540_5177887_-\|RIP-metalloprotease-RseP	gnl\|CDD\|182723	PRK10779, PRK10779, sigma E protease regulator RseP.	4.79365e-123
NZ_CP017190.1\|WP_011346889.1\|5171409_5172201_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	gnl\|CDD\|235390	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase.	7.89975e-151
NZ_CP017190.1\|WP_008578271.1\|5164401_5165361_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NZ_CP017190.1\|WP_014089738.1\|5160105_5161422_-\|polyhydroxyalkanoate-depolymerase	gnl\|CDD\|130908	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some [Fatty acid and phospholipid metabolism, Degradation].	0
NZ_CP017190.1\|WP_039418601.1\|5170093_5171380_-\|lipid-A-disaccharide-synthase	gnl\|CDD\|234580	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed.	0
NZ_CP017190.1\|WP_008578268.1\|5162398_5162845_+\|membrane-protein	gnl\|CDD\|367596	pfam03653, UPF0093, Uncharacterized protein family (UPF0093).	3.52541e-44
NZ_CP017190.1\|WP_008578264.1\|5158700_5159063_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	1.38706e-18
NZ_CP017190.1\|WP_011346883.1\|5161722_5162325_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	7.62064e-07
NZ_CP017190.1\|WP_008578263.1\|5156774_5158328_-\|hypothetical-protein	gnl\|CDD\|372583	pfam13372, Alginate_exp, Alginate export. This domain forms an 18-stranded beta-barrel pore which is likely to act as an alginate export channel.	1.29105e-31
NZ_CP017190.1\|WP_011346886.1\|5165544_5169135_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP017190.1\|WP_003485378.1\|5172226_5172685_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	3.06233e-81
NZ_CP017190.1\|WP_074038598.1\|5174090_5176544_-\|outer-membrane-protein-assembly-factor-BamA	gnl\|CDD\|274514	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog, YtfM, that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244), followed by an outer membrane beta-barrel domain (pfam01103), while the YtfM family typically has a single pfam07244 repeat. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP017190.1\|WP_008578280.1\|5172681_5173695_-\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	gnl\|CDD\|234858	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional.	1.42102e-173
NZ_CP017190.1\|WP_011346882.1\|5159059_5159977_+\|membrane-protein	gnl\|CDD\|379374	pfam13796, Sensor, Putative sensor. This family is often found at the N-terminus of proteins containing pfam07730 and pfam02518. The N-termini of proteins containing these two domains often function in stimulus sensing.	8.67053e-32

>NZ_CP017190.1|WP_011346886.1|5165544_5169135_-|DNA-polymerase-III-subunit-alpha
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDMPALAVTDLNNLFALVKFYKAAEGVGIKPIAGADVMIATPDMTPWRMTLLCRDREGYLSLSRLLTRAWMEGHRPEGGVAIHPEWLQAGHANLFALAGRDSLAGRLFNEGRADLAEQQLADWQRVFGDGLHLELTRTGREGEERFNQFALHAAGVRGLPVVASNDVRFLYASDFNAHEARVCISSGRVLDDPKRPREYSDQQYMKSSEEMAALFADIPDAIDNTHALAQRCNIEMRLGTYFLPAYPVPEDETLDSWIRSQSRQGLAARLEKNPIAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQWGKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDAGRVLGFSYGLVDSVAKLIPNILGITLKDAMGEGKDSEMASPDLIQRYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPDPLSEFCPLFAEHDEDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARAGIDPVDITAIPLDDVPTYKGVFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLYRPGPMDLIPDFNARKHGQQEIVYPDPRTEVILKDTYGIMVYQEQVMQMAQIVGDYSLGGADLLRRAMGKKVPAEMAKHREIFREGAAKGGVSAAKADEIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEAASPDTIQYGLGAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTARLNRRTLEAMINAGAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSAPAMRLDLPESKEWPLGQLLTGERETLGFYLSGHPFDPHREEVRELVGCDLGALEKILASQQRGGGGGGGDGEKRAWRPEVSAILAGQVVGVRRKGDSQVFVQLEDGRGRVECSAFSDAMAEFGHLLTRDRILIVKGGLREDEFNDGYSLRIRQCWDYEQICADHAQRLSLRLDLREKHAFSRIDALLAKHRPGKTPLRLDLLLRAPSGGVAGMLDLNGTHSVRIDQQLMDSLRADPAVRTVKIKYSPPWA
>NZ_CP017190.1|WP_008578271.1|5164401_5165361_-|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha
MNPNYLDFEQPIADLEAKIQELRKASTGPAVNVETEVRALRDKLRVRTAQIFRDLSAWQVSQLARHPQRPYTLDYIDTICDEFQELAGDRAYADDKAIVGGLGRIDGRPVVIIGHQKGRDTKTKVARNFGMPRPEGYRKALRLMKLAERFRLPLLTFIDTPGAYPGIGAEERGQSEAIARNLLEMAELKIPVICTVIGEGGSGGALAIGVGDRTLMLEYGTYSVISPEGCASILWKDAAKAKDAAEQLGLTAKRLKGLGLVDKVIREPTGGAHRNPEQMGKRLKAVLLNELDALEKIPVDALLQQRYERLRSYGAYEGH
>NZ_CP017190.1|WP_011346885.1|5163588_5164344_-|tetratricopeptide-repeat-protein
MSPLLLISLLLQAACCVHVVRSGRPLYWIFLLLAFSLLAVLVYVCVAVIPDLRNDPNARRRLKRVRSTLDPQREQRDASRRLDVADTPENRRQLAETLLARGDYAQAAEHYQGALRGLYRDDPHLMLGLAKAQFGLGQPQQTRQTLDALIAANPSFRSHDGHLLYARAVEGSGDTEAALHEYETLAQGYPGEEARVRYAQLLQRIARNDQARAVYEQVLRHAAASPKHYQREQRAWVDLARKGLRELDTSA
>NZ_CP017190.1|WP_011346884.1|5163049_5163499_-|hypothetical-protein
MQRKPEIEAVLKAEIDHLLEQSTQRFRSGALAESLALGLQAWALIPEPKANWDYYPQSLSASFVKDYADLHDQENVHRWIEVMALMYDDPDHTDHLVLMTEGEAMLQLGDEARACAAFGKIHALYGKKGFAGHQKRYLEMLLKPHPTGA
>NZ_CP017190.1|WP_008578268.1|5162398_5162845_+|membrane-protein
MTLYLWIKTFHLLFVIAWMAAVFYLPRILVNIAEAGSDTAVRARLVLMGRRLYTFGHSMLGLALLLGAVLWQGYRVIPDFPTMVAGGWLHAKLFAVALILAHYIVSGRWVKGAEQGRAVPSGRALRWFNEAPVILLVGVIWLVLAKPF
>NZ_CP017190.1|WP_011346883.1|5161722_5162325_-|class-I-SAM-dependent-methyltransferase
MQQSAPKQYDAHYFRRWYRDAGLADPARLRRKVALAVAQAEYYLERPIRSVLDVGCGEAAWRAPLLALRPKLSYLGFDSSAYAVQRYGRSRQIHPARFGDFAWLRPCAPVDLLICSDVLHYVPTREFNQGLPGLAEMCAGVAFLEAFAEEDAFEGDHDGFQARPARWYRKRFASVGFAALGSHCWLSPQLADQASALERG
>NZ_CP017190.1|WP_014089738.1|5160105_5161422_-|polyhydroxyalkanoate-depolymerase
MGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEYEKPAWALDDVEVDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFRLEDYITYIQEFIRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLATENGIEWFQNNLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQFYDEYNAVLDMPAEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRNTALLSIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRWREVVYPQVREFIARYDADPVGSRDLATVTPIRKRGKRA
>NZ_CP017190.1|WP_011346882.1|5159059_5159977_+|membrane-protein
MNTIAQAHPLPTTIGDYLLQLRQALSGADPAMIQDALYDAEEYLRSELAEQQGKSEAEVIAGVASSYGAPEEVAEIYRETEVTVARALRPPVPPQRASWIGTFFGVAADPRTYGALFYMLLSLLTGVFYFTWVVTGASLSVGMLILIIGVPLLVLFFGSVRVLSLVEGRVVETLLGVRMPRRPQHPGLQGGWLQRIGAMFTDARTWSTMLYFLLMLPLGIVYFTVFCTLLSLSLGLAASPIAALFDQVAVLTWDGLDITSAWLTLPLFAVGVLLLFVTLHLARAFGKLHGMFAKQLLVRSGEAAA
>NZ_CP017190.1|WP_008578264.1|5158700_5159063_+|PadR-family-transcriptional-regulator
MSEPDIHLRKFQKELSAGTVSLALLAVLAQADAPLYGYLIAKRLERLEGVLSGKQSALYPVLRNLEGAGLLHSHVEPSASGPPRRYYRITDSGRDCLRDWTAAWRATRDSVDSVLEGTHS
>NZ_CP017190.1|WP_008578263.1|5156774_5158328_-|hypothetical-protein
MQMTRLAQPAMADTSFGATRRLCLAIGLALPGLGLAQVQPAPTNAEQAVAEPAKAPVTAAPATAKGYPLEAQGWGAKQGGNMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSLSNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKGRIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNGARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNYYGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWSLSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQTTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNIDPNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF
>NZ_CP017190.1|WP_039418601.1|5170093_5171380_-|lipid-A-disaccharide-synthase
MDGQRNGASVGSDPTALPIPHSPLPIPGAHARPPRIALIAGEASGDILGAGLIEQLRLRYPNAEFVGIGGDAMRGVGCQTWFDASELAVMGLTEVLRHLPRLLKLRSAFRERVLAWKPDVFIGIDAPDFNLPVERWLKQRGIKTVHYVSPSVWAWREKRAEKIGVSADLVLCLFPMEPPIYARHGVDARFVGHPMADDIAYQADRAAARATLGLSASSTVLAVLPGSRHGEISRLGDTFFQAAWLVSEHLPNLHVLVPAANPGCKQLLAEQLSRSSLPVMRSHLLDGQARTAMLAADVVLLASGTATLEAMLVKRPMVVGYKVAPLTYRIVKLLGLLKVNRYALPNILANDDLAPELMQDDCAPERLCVALLDWFKHPDKVAALQPRYLALHAQLRRDASARAADAVAGLLEGRDSEVGIWDSAGAKA
>NZ_CP017190.1|WP_011346889.1|5171409_5172201_-|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase
MRDSTPLIHPTAVIDPSATLADDVRVGAFSLIGADVQIGAGTEVGPHCSIHGPTRIGRNNRFIGHAAIGGEPQDKKYAGERTELVIGDGNVIREFVTINRGTGGGGGVTVVGNDNWMLAYTHVAHDCHVGNHCVFSNNTTLAGHVTVGDYVIISGFAGAHQFCRIGAHAFLGMGALTNGDVPPFTMVGSDSLGRPRGINSEGLKRRGFDAERITAIKRAYRTLYVAGLPLADAKLQLAEQAKSSEDVRGMLEFIEAAERPLLR
>NZ_CP017190.1|WP_003485378.1|5172226_5172685_-|3-hydroxyacyl-ACP-dehydratase-FabZ
MSHHVYELPIDVSQIQTLLPHRYPFLLVDRILELDLETKWIVAQKNVSINEPFFQGHFPNRPVMPGVLIIEALAQVGGVMTQLGLGRDALSQLFYMVKVDKARFNKQVVPGDVLIMEVQMKRLIRNVGCFYGEAKVDGEVVASAEVMCAGAR
>NZ_CP017190.1|WP_008578280.1|5172681_5173695_-|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase
MRLTASAIAEQFGLTVVGDGTTEVSGVATLAHAGAGQLSFLSNPRYRPQLADTQAAVVVLRADDADAAKGTALVAKDPYTAFAKIAALFDVAPVREPGIHASAVIDPTAQVSPGAHVGPFVSIGARSRVGDGCVIGTGSIIGEDCVVDEGSELLARVTLVTRVRLGKRVRIHPGAVIGADGFGLAMDAGHWIKVPQLGGVVIGDDCEIGANTCIDRGALEDTVLEEDVRVDNLVQIAHNCRIGAHSAIAGCTGIAGSAKIGRYCLLGGHVGVVGHLEICDKVVITGKSVVRNSIHEPGEYSSGTPLTDNRTWRKNAARFKQLDVLARRILAVGKEKE
>NZ_CP017190.1|WP_011346890.1|5173822_5174014_+|hypothetical-protein
MKTVLSIFGSVILLGAITSASADDFAQQRTSALSFWDQQVQCVDASDWGATATCLGNVWNNYF
>NZ_CP017190.1|WP_074038598.1|5174090_5176544_-|outer-membrane-protein-assembly-factor-BamA
MKLLHSFRLLSSSYAGIQQHPNTTPTGCDMTRLPTRRLLALALAAGLSLPAVALAVEPFVASDIRVDGLQRIASGTVFTYLPVNRGDTVDDAKVADAIRALYRTGFFEDVQLDRQGNILVITVKERPAINKLTVTGNKDIKSEELLKGLGDIGLSEGGTFDRLSLDRVTQELTRQYNNRGKYNVEITPTVSPLDRNRVDVAIAIKEGKAAKIRHVNLIGTEKFANEDILDNWESKEHNWASWYRRDDQYSKEKMSGDLEKLNSWYLDRGYVDFSIDSTQVSISPDKRDMFISAGVTEGEQYKISEIKVTGDTVLPQADIERLVIPKAGDIFSRALLEYTSDAITNTLSNVGYAFAKVNPIPTPNREDRTVAVNLQVVPGPRVTVRRILYKGNSRTSDEVLRREMRQFENTWYSQAAIDRSKIRLQRLGYFESVDVETPAVPGSNDQVDVVYNVKETTSGSFVFGLGYSQSFGVTTSVQLSQNNFLGGGNRVAVEASRSSYQQRYAFSYTNPFFTDDGVSLGYNLSWRALDYSDFNTAQFNSKNGSAQVVFGVPITENDTVSAMVGIDSNQITTFAGTTPQAIIDYINAIGTRTFHAWRTELGWARDTRNDFFMPTRGMYQRVGLETTLPGSTVEYYKLNYQISNYWPIIPALVLNTRFELGYGDSYGKDSTRVLTNPDGSTRTVTATGLPFYENFYAGGTNSVRGFEDNTLGPRSEAINGFTRGQPLGGSFKTVGSVEMYFPKLFDSPSARVSAFVDFGNVYNGVDNFKANELRASTGVALLWRAPVGPISISYAFPLKKEDNDEIERLQFTFGGQF
>NZ_CP017190.1|WP_011346891.1|5176540_5177887_-|RIP-metalloprotease-RseP
MGDFIGSVWWMIVSLGVLVTFHEFGHFWVARRCGVKVLRFSVGFGKPLWMRRNRHGTEFVVAAIPLGGYVKMLDEREGDVHPAEQGQAFNRKTVWQRIAIVAAGPIANLLLCMAMLWAMFVVGKQDYSATIGRADGLAAEAGLGPGERIVRIDGRSVSSWSDASMQLTTAAMDRRDVRVLTASDAAGSSEHTLRLSQLPVGFDERRVAALAGIGWQFMLKPPVIAEVVKGSVADGLLKPGDRIVAIDGQPIRSAEDIIPQVQALGAHGGPGMIEVARGEDRLALEIAPRKSPQGQWMIGVRPAAAPAPEYDSRQQYGLFAAVPAAIRETGRMTADSLGMMKRMLTGQASVKNISGPVTIARAANASAERGLDWFLYFLGLLSLSLAIINLMPIPILDGGHLLYYLIELIKGSPISERAMIAGQYVGLAVLAGLMGLAFYNDILGLVPR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017190_2	2.1\|787303\|25\|NZ_CP017190\|CRISPRCasFinder	787303-787327	25	NC_014842	Pantoea sp. At-9b plasmid pPAT9B05, complete sequence	45680-45704	5	0.8
NZ_CP017190_1	1.2\|139306\|35\|NZ_CP017190\|PILER-CR	139306-139340	35	NZ_CP020333	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM170, complete sequence	127336-127370	10	0.714

1. spacer 2.1|787303|25|NZ_CP017190|CRISPRCasFinder matches to NC_014842 (Pantoea sp. At-9b plasmid pPAT9B05, complete sequence) position: , mismatch: 5, identity: 0.8

aattaccgtggtttcaggtaaagag	CRISPR spacer
gcgtaccgtggtttcagataaagaa	Protospacer
.  **************.******.

2. spacer 1.2|139306|35|NZ_CP017190|PILER-CR matches to NZ_CP020333 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM170, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggcgctcactgcggcggccccgttgatctgcg	CRISPR spacer
aagtttgctcacttcggcggccacgttgatctctg	Protospacer
.    .******* ******** ********* .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

336405 : 347176

Micromonas_pusilla_virus(16.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011347109.1\|336405_338082_+	2-polyprenylphenol 6-hydroxylase	G8DDN0	Micromonas_pusilla_virus	1.9e-41	29.7
WP_011347110.1\|338167_338809_+	transcriptional repressor LexA	A0A1W6JNS2	Morganella_phage	2.4e-13	40.2
WP_008574635.1\|338981_340016_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.1e-113	61.0
WP_011347111.1\|340312_340801_+	recombination regulator RecX	NA	NA	NA	NA
WP_011347112.1\|340902_343551_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	4.8e-84	39.8
WP_003481884.1\|343690_343903_+	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	1.3e-13	76.5
WP_029819220.1\|345217_347176_+	PAS domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-12	42.9

DBSCAN-SWA_2

422583 : 432338

Leptospira_phage(80.0%)

transposase,integrase

attL 422555:422614|attR 454477:455702

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
422555:422614	attL	NA	NA	NA	NA
WP_087942069.1\|422583_423716_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_087944903.1\|424711_425867_+\|transposase	IS3-like element ISXc8 family transposase	NA	NA	NA	NA
WP_126952920.1\|426055_426487_+	hypothetical protein	NA	NA	NA	NA
WP_087944180.1\|426545_427654_-\|transposase	IS3-like element ISXca2 family transposase	S5WIU1	Leptospira_phage	5.9e-44	38.3
WP_005916811.1\|427919_429377_-\|integrase	site-specific integrase	A0A0A0YR56	Pseudomonas_phage	3.9e-11	24.8
WP_126965074.1\|430228_431239_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	8.6e-42	37.5
WP_087944180.1\|431229_432338_-\|transposase	IS3-like element ISXca2 family transposase	S5WIU1	Leptospira_phage	5.9e-44	38.3
454477:455702	attR	NA	NA	NA	NA

DBSCAN-SWA_3

939539 : 978410

Salmonella_phage(40.0%)

transposase,integrase

attL 945046:945062|attR 981881:981897

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087944903.1\|939539_940696_-\|transposase	IS3-like element ISXc8 family transposase	NA	NA	NA	NA
WP_011347465.1\|941627_941933_-	hypothetical protein	NA	NA	NA	NA
WP_011347466.1\|942021_942342_-	hypothetical protein	NA	NA	NA	NA
WP_011347467.1\|942390_943500_-	O-methyltransferase	NA	NA	NA	NA
WP_011347468.1\|943563_944214_-	hypothetical protein	NA	NA	NA	NA
WP_011347469.1\|944341_944665_-	hypothetical protein	NA	NA	NA	NA
WP_011347470.1\|944756_945437_-	DUF3275 family protein	NA	NA	NA	NA
945046:945062	attL	NA	NA	NA	NA
WP_011347471.1\|945498_946428_-	DUF3577 domain-containing protein	NA	NA	NA	NA
WP_080954318.1\|947835_948192_+	hypothetical protein	NA	NA	NA	NA
WP_011347473.1\|948329_951326_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.4e-84	27.8
WP_011347474.1\|951334_952609_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_011345701.1\|952802_953870_+	cointegrate resolution protein T	NA	NA	NA	NA
WP_011347477.1\|955305_956628_-	pectate lyase	NA	NA	NA	NA
WP_080505918.1\|957286_957817_+\|integrase	integrase	NA	NA	NA	NA
WP_011347479.1\|957950_959027_+	hypothetical protein	NA	NA	NA	NA
WP_011347481.1\|959340_960267_-	hypothetical protein	NA	NA	NA	NA
WP_011347482.1\|960266_962393_-	hypothetical protein	NA	NA	NA	NA
WP_011347483.1\|962633_963026_-	hypothetical protein	NA	NA	NA	NA
WP_011347484.1\|963047_963260_-	hypothetical protein	NA	NA	NA	NA
WP_011347485.1\|963732_965271_-	DNA cytosine methyltransferase	A0A1B0V7P0	Salmonella_phage	1.7e-94	40.0
WP_011347486.1\|965805_967818_-	DNA topoisomerase III	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	5.8e-13	23.6
WP_011347487.1\|968097_968538_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_011347488.1\|968611_969145_-	DUF3158 family protein	NA	NA	NA	NA
WP_011347489.1\|969141_969897_-	TIGR03761 family integrating conjugative element protein	NA	NA	NA	NA
WP_011347490.1\|970218_971445_-	hypothetical protein	NA	NA	NA	NA
WP_011347491.1\|971448_972009_-	DUF2857 domain-containing protein	NA	NA	NA	NA
WP_011347492.1\|972024_973668_-	hypothetical protein	NA	NA	NA	NA
WP_011347493.1\|973660_973921_-	hypothetical protein	NA	NA	NA	NA
WP_087944892.1\|974037_975193_+\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
WP_011347495.1\|976466_978410_+\|integrase	tyrosine-type recombinase/integrase	A0A0U1UNT3	Pseudomonas_phage	2.7e-100	49.9
981881:981897	attR	NA	NA	NA	NA

DBSCAN-SWA_4

996033 : 1028062

Escherichia_phage(40.0%)

transposase,integrase

attL 1016103:1016162|attR 1028057:1028937

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001389365.1\|996033_996798_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_011347518.1\|997373_999101_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_003465017.1\|999196_1000081_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003830781.1\|1000264_1000528_-	hypothetical protein	NA	NA	NA	NA
WP_077203601.1\|1000379_1000910_-	hypothetical protein	NA	NA	NA	NA
WP_000480968.1\|1001098_1001935_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|1001934_1002738_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000904906.1\|1002803_1003418_-	recombinase family protein	E5FFF9	Burkholderia_phage	2.3e-37	48.6
WP_001389365.1\|1003961_1004726_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_011347521.1\|1004754_1005249_+	hypothetical protein	NA	NA	NA	NA
WP_011347522.1\|1005251_1006400_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_011347523.1\|1006418_1007597_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_011347524.1\|1007633_1008662_+	alcohol dehydrogenase catalytic domain-containing protein	A0A2K9L339	Tupanvirus	4.7e-27	30.0
WP_011347525.1\|1008714_1009944_+	MFS transporter	NA	NA	NA	NA
WP_011347526.1\|1010017_1010497_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_011347527.1\|1010512_1013014_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.4e-88	31.9
WP_011347528.1\|1013181_1013535_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011347529.1\|1013723_1014725_+	cation transporter	A0A1V0SED0	Indivirus	4.1e-20	26.4
WP_049756420.1\|1015019_1016138_+	MFS transporter	NA	NA	NA	NA
1016103:1016162	attL	NA	NA	NA	NA
WP_001389365.1\|1016156_1016921_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_011347531.1\|1016886_1017771_-	TniQ family protein	NA	NA	NA	NA
WP_000393453.1\|1017767_1018676_-	AAA family ATPase	NA	NA	NA	NA
WP_011347532.1\|1018678_1020397_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_041855125.1\|1020590_1020803_+	hypothetical protein	NA	NA	NA	NA
WP_003830784.1\|1022045_1022888_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_032437899.1\|1023005_1023539_+	alkylhydroperoxidase	NA	NA	NA	NA
WP_011347538.1\|1024460_1025477_-	MFS transporter	NA	NA	NA	NA
WP_087944905.1\|1025442_1026592_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-52	43.7
WP_011347540.1\|1026724_1027165_-	carboxymuconolactone decarboxylase	NA	NA	NA	NA
WP_001389365.1\|1027297_1028062_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
1028057:1028937	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1112480 : 1143705

Xanthomonas_phage(66.67%)

transposase,coat,integrase

attL 1098277:1098291|attR 1150333:1150347

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1098277:1098291	attL	NA	NA	NA	NA
WP_011347617.1\|1112480_1113443_+\|transposase	IS1595-like element IS1595 family transposase	NA	NA	NA	NA
WP_011347618.1\|1113618_1114674_-	DNA-binding protein	NA	NA	NA	NA
WP_011347619.1\|1114858_1116133_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_011347620.1\|1116140_1119131_+\|transposase	Tn3-like element TnXax1 family transposase	A0A1B0V7H9	Salmonella_phage	7.6e-86	27.4
WP_011347621.1\|1119263_1120541_+	lytic murein transglycosylase	NA	NA	NA	NA
WP_155405766.1\|1120579_1120816_-	hypothetical protein	NA	NA	NA	NA
WP_008575714.1\|1121666_1122107_-	TIGR01244 family phosphatase	NA	NA	NA	NA
WP_008575716.1\|1122103_1122535_-	membrane protein	NA	NA	NA	NA
WP_008575717.1\|1122531_1122972_-	YeeE/YedE family protein	NA	NA	NA	NA
WP_011347623.1\|1122968_1123835_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_033479010.1\|1124089_1124398_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011347626.1\|1124948_1125974_-	alpha/beta hydrolase	A0A2P1EM31	Moumouvirus	3.2e-52	37.5
WP_039417975.1\|1126085_1126907_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_011347629.1\|1127118_1127307_-	hypothetical protein	NA	NA	NA	NA
WP_011347630.1\|1127311_1127959_-	conjugal transfer protein TrbP	A0A1W6DY89	Xanthomonas_phage	3.4e-108	88.8
WP_011347631.1\|1127960_1129154_-	hypothetical protein	A0A1W6DXR3	Xanthomonas_phage	1.0e-211	94.7
WP_011347632.1\|1129153_1129483_-	DUF2523 domain-containing protein	A0A1D6ZIU0	Xanthomonas_phage	1.1e-54	98.2
WP_041855057.1\|1129482_1130946_-	hypothetical protein	A0A1D6ZIU5	Xanthomonas_phage	1.2e-172	75.9
WP_011347634.1\|1131083_1131314_-	hypothetical protein	A0A1W6DXZ2	Xanthomonas_phage	2.2e-30	100.0
WP_011347635.1\|1131325_1131529_-	hypothetical protein	A0A1D6ZIU2	Xanthomonas_phage	9.8e-30	98.5
WP_011347636.1\|1131532_1131829_-	hypothetical protein	NA	NA	NA	NA
WP_041855058.1\|1132158_1132704_-	hypothetical protein	NA	NA	NA	NA
WP_011347638.1\|1133004_1133190_-	hypothetical protein	NA	NA	NA	NA
WP_041855059.1\|1133186_1133438_-	hypothetical protein	NA	NA	NA	NA
WP_041855132.1\|1133990_1134329_+	phage-like protein	Q38057	Xanthomonas_phage	6.4e-50	83.0
WP_005918116.1\|1134367_1134760_-	hypothetical protein	A0A077JCA3	Xanthomonas_phage	2.3e-19	46.2
WP_011347640.1\|1134789_1136112_-	hypothetical protein	Q4LAU4	Stenotrophomonas_phage	3.2e-129	55.2
WP_005918122.1\|1136113_1136434_-	filamentous phage phiLf protein VI	Q4LAU3	Stenotrophomonas_phage	1.2e-21	46.2
WP_005918124.1\|1136568_1136808_-	hypothetical protein	Q9XJ91	Xanthomonas_phage	7.4e-37	97.5
WP_005918131.1\|1137684_1137813_-\|coat	Phi-Lf prophage-derived major coat protein	NA	NA	NA	NA
WP_005918133.1\|1137840_1137957_-\|coat	Phi-Lf prophage-derived minor coat protein	NA	NA	NA	NA
WP_011347643.1\|1137932_1138064_-	hypothetical protein	NA	NA	NA	NA
WP_011347644.1\|1138095_1138392_-	hypothetical protein	A0A1W6DXU2	Xanthomonas_phage	3.5e-44	90.7
WP_011347645.1\|1138388_1139429_-	inovirus-type Gp2 protein	A0A077JDC0	Xanthomonas_phage	5.5e-201	98.0
WP_039417963.1\|1139760_1139976_-	hypothetical protein	NA	NA	NA	NA
WP_080505884.1\|1140060_1140564_+	hypothetical protein	A0A077JCZ5	Xanthomonas_phage	1.5e-63	96.2
WP_011347650.1\|1141728_1142472_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.7e-67	52.5
WP_087944892.1\|1142549_1143705_+\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
1150333:1150347	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2193597 : 2229756

Leptospira_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087942069.1\|2193597_2194729_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_011348344.1\|2195122_2195470_+	type I addiction module toxin, SymE family	NA	NA	NA	NA
WP_087944910.1\|2195511_2196619_+\|transposase	IS3-like element ISXca2 family transposase	S5WIU1	Leptospira_phage	7.7e-44	38.3
WP_074038731.1\|2196824_2197982_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_003490678.1\|2198151_2198829_-	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	7.4e-05	27.4
WP_011348347.1\|2198854_2199298_-	hypothetical protein	NA	NA	NA	NA
WP_011348348.1\|2199506_2200394_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	1.2e-31	31.6
WP_011348349.1\|2200895_2203028_+	glycogen debranching protein GlgX	NA	NA	NA	NA
WP_008576847.1\|2203652_2204045_-	H-NS histone family protein	NA	NA	NA	NA
WP_008576845.1\|2204135_2204528_-	hypothetical protein	NA	NA	NA	NA
WP_065613593.1\|2204638_2205340_-	thermonuclease family protein	NA	NA	NA	NA
WP_011348353.1\|2205775_2206024_+	hypothetical protein	NA	NA	NA	NA
WP_011348354.1\|2206520_2206865_+	hypothetical protein	NA	NA	NA	NA
WP_011348355.1\|2206928_2207210_+	hypothetical protein	NA	NA	NA	NA
WP_049756423.1\|2207193_2207586_+	transcriptional regulator	NA	NA	NA	NA
WP_011348357.1\|2207658_2209254_-	MobA/MobL family protein	NA	NA	NA	NA
WP_011348358.1\|2209519_2209846_+	hypothetical protein	NA	NA	NA	NA
WP_074038482.1\|2210027_2210477_+	hypothetical protein	NA	NA	NA	NA
WP_011348359.1\|2210450_2211104_-	hypothetical protein	NA	NA	NA	NA
WP_011348360.1\|2211143_2215106_-	hypothetical protein	NA	NA	NA	NA
WP_039419429.1\|2215138_2215780_-	DUF1629 domain-containing protein	NA	NA	NA	NA
WP_087944903.1\|2215821_2216978_-\|transposase	IS3-like element ISXc8 family transposase	NA	NA	NA	NA
WP_087942069.1\|2217323_2218455_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_011348364.1\|2218790_2219321_-	hypothetical protein	NA	NA	NA	NA
WP_080505898.1\|2219686_2220208_-	DUF4189 domain-containing protein	NA	NA	NA	NA
WP_011348365.1\|2220247_2221384_-	type IV secretion system protein	NA	NA	NA	NA
WP_011038242.1\|2221415_2221928_-	hypothetical protein	NA	NA	NA	NA
WP_039418204.1\|2223084_2224632_-	histidine kinase	NA	NA	NA	NA
WP_074038727.1\|2224710_2225361_+	hypothetical protein	NA	NA	NA	NA
WP_011345631.1\|2225923_2226904_-\|transposase	IS5-like element IS1646 family transposase	A0A077K814	Ralstonia_phage	7.4e-99	61.3
WP_087944903.1\|2228600_2229756_+\|transposase	IS3-like element ISXc8 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2622218 : 2630263

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011348607.1\|2622218_2623565_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.3e-32	27.1
WP_011348608.1\|2623611_2625015_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.5e-47	29.8
WP_008576953.1\|2625304_2626471_-	nucleotide sugar dehydrogenase	M1HV26	Paramecium_bursaria_Chlorella_virus	4.7e-116	57.6
WP_039416342.1\|2626811_2627714_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.2e-25	36.3
WP_011348610.1\|2627710_2628268_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.5e-43	47.8
WP_011348611.1\|2628264_2629152_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.6e-95	58.5
WP_011348612.1\|2629207_2630263_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	6.8e-82	48.3

DBSCAN-SWA_8

3133627 : 3213556

Ralstonia_phage(25.0%)

transposase,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345631.1\|3133627_3134608_+\|transposase	IS5-like element IS1646 family transposase	A0A077K814	Ralstonia_phage	7.4e-99	61.3
WP_041855153.1\|3134719_3135151_+	hypothetical protein	NA	NA	NA	NA
WP_011348965.1\|3135291_3136023_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	1.4e-09	27.8
WP_039418991.1\|3136205_3136745_+	hypothetical protein	NA	NA	NA	NA
WP_011348967.1\|3136754_3137186_-	hotdog family protein	NA	NA	NA	NA
WP_011348968.1\|3137172_3139539_-	MMPL family transporter	NA	NA	NA	NA
WP_041469883.1\|3139528_3139810_-	hypothetical protein	NA	NA	NA	NA
WP_011348969.1\|3139745_3139973_-	hypothetical protein	NA	NA	NA	NA
WP_011348970.1\|3140111_3140759_-	hypothetical protein	NA	NA	NA	NA
WP_008571161.1\|3140682_3141657_-	acyltransferase	NA	NA	NA	NA
WP_011348971.1\|3141653_3141941_-	hypothetical protein	NA	NA	NA	NA
WP_011348972.1\|3141952_3142702_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_011348973.1\|3142755_3143502_-	xanthomonadin biosynthesis membrane protein	NA	NA	NA	NA
WP_005914783.1\|3143476_3143746_-	acyl carrier protein	NA	NA	NA	NA
WP_039418047.1\|3144049_3145396_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_074038914.1\|3145509_3146403_+	pteridine-dependent deoxygenase	NA	NA	NA	NA
WP_046934810.1\|3146708_3148016_-	acyl-CoA synthetase	NA	NA	NA	NA
WP_041855091.1\|3148642_3151003_+	S9 family peptidase	NA	NA	NA	NA
WP_039418043.1\|3151433_3152150_+	hypothetical protein	NA	NA	NA	NA
WP_011348981.1\|3152146_3152740_+	hypothetical protein	NA	NA	NA	NA
WP_008571148.1\|3153142_3154042_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA
WP_011348983.1\|3154885_3157687_-	DNA polymerase I	A0A218MKQ4	uncultured_virus	6.2e-66	30.3
WP_008571145.1\|3157763_3158054_+	DUF2782 domain-containing protein	NA	NA	NA	NA
WP_011348984.1\|3158409_3159453_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_011348985.1\|3159502_3167686_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_029820696.1\|3167697_3169374_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_011348987.1\|3169370_3169832_-	hypothetical protein	NA	NA	NA	NA
WP_011348988.1\|3169828_3173524_-	protein kinase	Q0N495	Clanis_bilineata_nucleopolyhedrovirus	1.2e-08	29.2
WP_011348989.1\|3173528_3174245_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_039417626.1\|3174241_3174817_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_041855092.1\|3174813_3178344_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_039417628.1\|3178340_3179618_-	type VI secretion system protein TssL	NA	NA	NA	NA
WP_011348993.1\|3179599_3180934_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_011348994.1\|3181436_3182327_-	aldo/keto reductase family oxidoreductase	NA	NA	NA	NA
WP_039417629.1\|3182576_3183458_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011348996.1\|3183516_3184848_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_008573306.1\|3185167_3185716_-	hypothetical protein	NA	NA	NA	NA
WP_008573304.1\|3185712_3187680_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	7.3e-37	27.9
WP_011348998.1\|3187829_3189161_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_011348999.1\|3189396_3189711_-	hypothetical protein	NA	NA	NA	NA
WP_041855093.1\|3189754_3192274_-	tetratricopeptide repeat protein	A0A2P1EMR8	Moumouvirus	1.0e-11	30.2
WP_039419276.1\|3192252_3192792_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_011349002.1\|3193141_3193669_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_011349003.1\|3193659_3194736_+	DUF4880 domain-containing protein	NA	NA	NA	NA
WP_039419279.1\|3195197_3198086_+	TonB-dependent receptor	NA	NA	NA	NA
WP_011349005.1\|3198189_3199491_+	histidine-type phosphatase	NA	NA	NA	NA
WP_011349006.1\|3199563_3200868_+	hypothetical protein	NA	NA	NA	NA
WP_011349007.1\|3201485_3202220_-	hypothetical protein	NA	NA	NA	NA
WP_011349008.1\|3202280_3202940_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_011349009.1\|3202991_3203381_-	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_039419229.1\|3204571_3204835_+	hypothetical protein	NA	NA	NA	NA
WP_126952868.1\|3205281_3205776_-	hypothetical protein	NA	NA	NA	NA
WP_011349013.1\|3205908_3206406_-	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|3206577_3207709_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_011349014.1\|3207849_3210612_-	type VI secretion system ATPase TssH	A0A248SJW6	Salicola_phage	9.5e-75	27.5
WP_011349015.1\|3210668_3211709_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_041855094.1\|3211672_3213556_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_9

4220298 : 4231809

Leptospira_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011346248.1\|4220298_4220997_-\|transposase	transposase	NA	NA	NA	NA
WP_041855019.1\|4221389_4221827_+	hypothetical protein	NA	NA	NA	NA
WP_011346250.1\|4221823_4223467_+	hypothetical protein	NA	NA	NA	NA
WP_041855020.1\|4223552_4224410_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.6e-39	34.0
WP_011346252.1\|4224406_4224700_-\|transposase	transposase	NA	NA	NA	NA
WP_087944898.1\|4224770_4225857_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.9e-43	37.2
WP_046935371.1\|4226960_4227599_+	hypothetical protein	NA	NA	NA	NA
WP_011345631.1\|4227738_4228719_-\|transposase	IS5-like element IS1646 family transposase	A0A077K814	Ralstonia_phage	7.4e-99	61.3
WP_080505912.1\|4229641_4230070_+	hypothetical protein	NA	NA	NA	NA
WP_011346255.1\|4230410_4230593_-	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|4230676_4231809_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1

DBSCAN-SWA_10

4737476 : 4780224

Bacillus_phage(18.18%)

integrase,protease,transposase

attL 4765063:4765080|attR 4780310:4780327

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003483788.1\|4737476_4738763_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.3e-137	59.9
WP_011346585.1\|4738907_4741379_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.8e-224	52.2
WP_011346586.1\|4741592_4741865_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.7e-21	64.0
WP_011346587.1\|4742504_4744475_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_011346588.1\|4745137_4746316_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_011346589.1\|4746312_4747080_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_011346590.1\|4747092_4747749_+	hypothetical protein	NA	NA	NA	NA
WP_011346591.1\|4747776_4748229_+	ribonuclease HI	A0A1Q2U2R0	Vibrio_phage	2.8e-40	55.4
WP_008571573.1\|4748237_4748972_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	2.3e-36	40.9
WP_011346592.1\|4749013_4749718_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_109298542.1\|4750274_4751576_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_109298543.1\|4751591_4753571_-	molybdopterin-guanine dinucleotide biosynthesis protein MobA	NA	NA	NA	NA
WP_011346595.1\|4753817_4754171_+	conjugal transfer protein TraD	NA	NA	NA	NA
WP_126952843.1\|4754281_4754839_-	hypothetical protein	NA	NA	NA	NA
WP_011346597.1\|4754777_4755164_-	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|4755233_4756365_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_074038611.1\|4756694_4757090_-	hypothetical protein	NA	NA	NA	NA
WP_011346598.1\|4757101_4757851_-	hypothetical protein	NA	NA	NA	NA
WP_074038610.1\|4757979_4758315_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011346600.1\|4758699_4759104_+	hypothetical protein	A0A1C9C5K8	Heterosigma_akashiwo_virus	1.1e-16	35.9
WP_039416578.1\|4759315_4760365_-	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_011346602.1\|4760385_4761135_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA
WP_011346603.1\|4761134_4761884_+	MBL fold metallo-hydrolase	A0A0A0RUN7	Bacillus_phage	1.9e-09	26.0
WP_011346604.1\|4761883_4762915_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_011346605.1\|4762911_4763292_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_011346606.1\|4763316_4763814_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_008571288.1\|4763810_4764056_+	molybdopterin converting factor subunit 1	NA	NA	NA	NA
WP_039416583.1\|4764052_4764499_+	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
4765063:4765080	attL	NA	NA	NA	NA
WP_074038609.1\|4765832_4766258_+	hypothetical protein	NA	NA	NA	NA
WP_011346608.1\|4766576_4767476_-	site-specific DNA-methyltransferase	S4VTY0	Pandoravirus	1.6e-103	66.2
WP_046934847.1\|4767688_4768048_-	hypothetical protein	NA	NA	NA	NA
WP_011346610.1\|4768065_4768380_-	hypothetical protein	NA	NA	NA	NA
WP_087944180.1\|4768453_4769561_+\|transposase	IS3-like element ISXca2 family transposase	S5WIU1	Leptospira_phage	5.9e-44	38.3
WP_011346611.1\|4769932_4770412_+	DNA repair protein RadC	NA	NA	NA	NA
WP_039417682.1\|4770565_4771192_+	hypothetical protein	NA	NA	NA	NA
WP_087944892.1\|4772123_4773279_+\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
WP_011346615.1\|4774197_4775061_+	excinuclease Cho	NA	NA	NA	NA
WP_011346616.1\|4775209_4775464_-	hypothetical protein	NA	NA	NA	NA
WP_011346617.1\|4775728_4777330_+	MobA/MobL family protein	NA	NA	NA	NA
WP_011346618.1\|4777382_4777724_-	hypothetical protein	NA	NA	NA	NA
WP_011346619.1\|4777880_4778561_-	hypothetical protein	NA	NA	NA	NA
WP_011346620.1\|4778706_4780224_-\|integrase	site-specific integrase	NA	NA	NA	NA
4780310:4780327	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP017191

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 8223

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041854952.1\|291_795_+	hypothetical protein	NA	NA	NA	NA
WP_129111526.1\|791_1706_-	hypothetical protein	NA	NA	NA	NA
WP_011345660.1\|1716_4620_-	hypothetical protein	NA	NA	NA	NA
WP_011345659.1\|4680_5667_-	hypothetical protein	NA	NA	NA	NA
WP_011345658.1\|5669_6323_-	hypothetical protein	NA	NA	NA	NA
WP_041854950.1\|6831_8223_-	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	7.8e-110	50.0

DBSCAN-SWA_2

23204 : 24122

Arthrobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345641.1\|23204_24122_-	M23 family metallopeptidase	V5R8R0	Arthrobacter_phage	9.6e-08	41.2

DBSCAN-SWA_3

32534 : 38518

Ralstonia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345631.1\|32534_33515_+\|transposase	IS5-like element IS1646 family transposase	A0A077K814	Ralstonia_phage	7.4e-99	61.3
WP_152667177.1\|33619_33901_-	hypothetical protein	NA	NA	NA	NA
WP_087944894.1\|34302_35458_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.1e-88	58.8
WP_100101058.1\|35920_37022_+\|transposase	IS3-like element IS1404 family transposase	S5WIU1	Leptospira_phage	4.5e-44	41.9
WP_011345631.1\|37537_38518_-\|transposase	IS5-like element IS1646 family transposase	A0A077K814	Ralstonia_phage	7.4e-99	61.3

DBSCAN-SWA_4

61213 : 62506

Aeromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345611.1\|61213_62506_-	AAA family ATPase	A0A1I9KF58	Aeromonas_phage	2.8e-29	29.6

DBSCAN-SWA_5

76289 : 76796

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046936165.1\|76289_76796_-	hypothetical protein	A0A2H4P790	Pseudomonas_phage	7.6e-23	37.2

DBSCAN-SWA_6

86353 : 90073

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345748.1\|86353_88540_+	DNA topoisomerase TraE	A0A1X9I6W8	Streptococcus_phage	1.6e-32	27.5
WP_011345746.1\|88765_89506_+	EAL domain-containing protein	NA	NA	NA	NA
WP_011345745.1\|89776_90073_+	hypothetical protein	A0A1I9KFG5	Aeromonas_phage	9.0e-16	59.3

DBSCAN-SWA_7

95773 : 97801

Roseobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345737.1\|95773_97801_+	DEAD/DEAH box helicase	A0A1B0UY08	Roseobacter_phage	8.9e-22	25.0

DBSCAN-SWA_8

101942 : 145879

Salmonella_phage(21.43%)

integrase,transposase

attL 106523:106539|attR 142529:142545

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345730.1\|101942_102854_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	5.7e-45	34.8
WP_011345729.1\|102869_104093_-	site-specific DNA-methyltransferase	A0A142KCX9	Gordonia_phage	7.1e-06	25.8
WP_011345728.1\|104106_104685_-	hypothetical protein	NA	NA	NA	NA
WP_011345727.1\|104700_105519_-	DNA methyltransferase	A0A2K8I312	Pseudomonas_phage	1.2e-54	44.4
WP_011345726.1\|105765_106143_-	hypothetical protein	NA	NA	NA	NA
WP_011345725.1\|106238_106592_-	single-stranded DNA-binding protein	NA	NA	NA	NA
106523:106539	attL	NA	NA	NA	NA
WP_011345724.1\|106780_107080_+	HU family DNA-binding protein	NA	NA	NA	NA
WP_041854964.1\|107388_107739_+	carbon storage regulator	NA	NA	NA	NA
WP_011345722.1\|108037_109126_+	acyltransferase	A0A2H4J8Z5	uncultured_Caudovirales_phage	1.5e-12	28.8
WP_129111511.1\|109170_109860_-	hypothetical protein	NA	NA	NA	NA
WP_129111510.1\|109899_110289_-	hypothetical protein	NA	NA	NA	NA
WP_100666167.1\|110393_111425_-	hypothetical protein	A0A172Q0B8	Acinetobacter_phage	3.2e-28	29.6
WP_011345719.1\|111465_111861_-	hypothetical protein	NA	NA	NA	NA
WP_011345718.1\|111928_113149_-\|integrase	tyrosine-type recombinase/integrase	Q5QBN6	Enterobacteria_phage	1.2e-18	27.4
WP_129111531.1\|113170_113620_-	hypothetical protein	J7I0S8	Pseudomonas_phage	7.7e-35	52.1
WP_011345716.1\|113720_114611_-	hypothetical protein	NA	NA	NA	NA
WP_011345715.1\|114607_115078_-	hypothetical protein	NA	NA	NA	NA
WP_129111532.1\|115097_115796_-	hypothetical protein	NA	NA	NA	NA
WP_129111533.1\|115792_116203_-	hypothetical protein	NA	NA	NA	NA
WP_041854963.1\|116253_116592_-	hypothetical protein	NA	NA	NA	NA
WP_041854962.1\|116749_118105_-	hypothetical protein	NA	NA	NA	NA
WP_011345711.1\|118365_121326_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.1e-81	25.5
WP_005918428.1\|122323_123022_-	UPF0149 family protein	NA	NA	NA	NA
WP_011345576.1\|123040_126016_-\|transposase	Tn3-like element ISXc4 family transposase	Q1MVP5	Enterobacteria_phage	4.7e-253	47.1
WP_003491210.1\|126020_126440_-	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_003491212.1\|126439_126679_-	hypothetical protein	NA	NA	NA	NA
WP_003491216.1\|126893_127817_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.8e-39	51.4
WP_087944895.1\|127821_128879_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.9e-37	36.1
WP_074038421.1\|130343_130991_+	hypothetical protein	NA	NA	NA	NA
WP_011037255.1\|131081_132419_+	avirulence protein	NA	NA	NA	NA
WP_011345705.1\|132690_133257_-	recombinase family protein	Q71TD8	Escherichia_phage	3.0e-44	53.0
WP_005917852.1\|133446_133707_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_011053002.1\|133703_134105_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_005917846.1\|134129_134393_+	hypothetical protein	NA	NA	NA	NA
WP_011053001.1\|134399_135587_+	hypothetical protein	NA	NA	NA	NA
WP_011345704.1\|135866_137093_+	replication protein	NA	NA	NA	NA
WP_011345703.1\|137423_140387_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.2e-80	25.2
WP_011345701.1\|141554_142622_+	cointegrate resolution protein T	NA	NA	NA	NA
142529:142545	attR	NA	NA	NA	NA
WP_011345700.1\|142609_143647_-	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|144746_145879_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1

DBSCAN-SWA_9

154916 : 158228

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345687.1\|154916_158228_-	AAA family ATPase	A7KV33	Bacillus_phage	4.2e-29	28.4

DBSCAN-SWA_10

162299 : 163391

Stenotrophomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345682.1\|162299_163391_-	AAA family ATPase	A0A2D2W2C3	Stenotrophomonas_phage	3.2e-10	31.0

DBSCAN-SWA_11

171396 : 171846

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011345672.1\|171396_171846_+	hypothetical protein	A0A1Y0SZR3	Pseudomonas_phage	2.9e-13	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017190

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP017191

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection