CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP017749	Cupriavidus sp. USMAA2-4 chromosome 2, complete sequence	2 crisprs	csa3,DEDDh	0	3
NZ_CP017748	Cupriavidus sp. USMAA2-4 chromosome 1, complete sequence	3 crisprs	cas3,WYL,csa3,RT,DEDDh,DinG	0	5
NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	1 crisprs	c2c9_V-U4	5	3

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017749_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017749_1

2242540-2242636

Orphan

Consensus_repeat	Method
GCCGCAGTGCAGGGCGCCGCGCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017749_1

>merge|NZ_CP017749|1|2242540-2242636|CRISPRCasFinder
GCCGCAGTGCAGGGCGCCGCGCGCGTGCAGGTCCGCGCCGACCAGCAGGCCCGAGCCGGCGGAGAGCCTGTCGCCGCAGTGCAGGGCGCCGCGCACG

>NZ_CP017749|1|1|2242540-2242636|CRISPRCasFinder
GCCGCAGTGCAGGGCGCCGCGCGCG	TGCAGGTCCGCGCCGACCAGCAGGCCCGAGCCGGCGGAGAGCCTGTC
GCCGCAGTGCAGGGCGCCGCGCACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017749.1\|WP_071039613.1\|2251006_2251984_-\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NZ_CP017749.1\|WP_071021324.1\|2239760_2240645_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP017749.1\|WP_071021333.1\|2234317_2234899_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP017749.1\|WP_071022800.1\|2237156_2238020_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP017749.1\|WP_071039607.1\|2232672_2234190_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP017749.1\|WP_071039614.1\|2254334_2255090_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017749.1\|WP_157128551.1\|2238193_2239726_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP017749.1\|WP_071021300.1\|2252093_2253176_-\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|213783
NZ_CP017749.1\|WP_071021308.1\|2248761_2248965_-\|CopG-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP017749.1\|WP_071039608.1\|2235066_2236449_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP017749.1\|WP_157128552.1\|2243353_2243497_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017749.1\|WP_071040446.1\|2240847_2241366_+\|multidrug/biocide-efflux-PACE-transporter	unknown	unknown	gnl\|CDD\|226610
NZ_CP017749.1\|WP_071039611.1\|2243863_2245027_+\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|374209
NZ_CP017749.1\|WP_071039606.1\|2231596_2232565_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP017749.1\|WP_071040448.1\|2241502_2242096_-\|N-acetyltransferase	unknown	unknown	unknown
NZ_CP017749.1\|WP_071039612.1\|2249823_2250927_-\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NZ_CP017749.1\|WP_071021310.1\|2247057_2248707_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|183265
NZ_CP017749.1\|WP_071021315.1\|2245068_2245329_+\|molybdopterin-synthase-sulfur-carrier-subunit	unknown	unknown	gnl\|CDD\|340594
NZ_CP017749.1\|WP_071021312.1\|2245518_2246487_+\|chemotaxis-protein-CheV	unknown	unknown	gnl\|CDD\|223905
NZ_CP017749.1\|WP_157128550.1\|2236881_2237052_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017749.1\|WP_071039613.1\|2251006_2251984_-\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	2.34275e-177
NZ_CP017749.1\|WP_071021324.1\|2239760_2240645_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.40065e-34
NZ_CP017749.1\|WP_071021333.1\|2234317_2234899_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.04492e-18
NZ_CP017749.1\|WP_071021300.1\|2252093_2253176_-\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	gnl\|CDD\|213783	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc. [Energy metabolism, Pyruvate dehydrogenase].	0
NZ_CP017749.1\|WP_071039607.1\|2232672_2234190_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP017749.1\|WP_157128551.1\|2238193_2239726_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.78875e-61
NZ_CP017749.1\|WP_071039608.1\|2235066_2236449_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	5.89373e-137
NZ_CP017749.1\|WP_071040446.1\|2240847_2241366_+\|multidrug/biocide-efflux-PACE-transporter	gnl\|CDD\|226610	COG4125, COG4125, Predicted membrane protein [Function unknown].	5.99967e-53
NZ_CP017749.1\|WP_071039611.1\|2243863_2245027_+\|glycosyl-hydrolase	gnl\|CDD\|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	8.99264e-05
NZ_CP017749.1\|WP_071039606.1\|2231596_2232565_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.41456e-67
NZ_CP017749.1\|WP_071022800.1\|2237156_2238020_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.99708e-40
NZ_CP017749.1\|WP_071039612.1\|2249823_2250927_-\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	4.72463e-135
NZ_CP017749.1\|WP_071021310.1\|2247057_2248707_+\|STAS-domain-containing-protein	gnl\|CDD\|183265	PRK11660, PRK11660, putative transporter; Provisional.	2.83029e-167
NZ_CP017749.1\|WP_071021315.1\|2245068_2245329_+\|molybdopterin-synthase-sulfur-carrier-subunit	gnl\|CDD\|340594	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins. CysO, also termed 9.5 kDa culture filtrate antigen cfp10A, together with CysM (Cysteine synthase M), forms a protein complex CysM-CysO that represents a new cysteine biosynthetic pathway in Mycobacterium tuberculosis. The replacement of the acetyl group of O-acetylserine by CysO thiocarboxylate to generate a protein-bound cysteine is catalyzed by CysM in a pyridoxal 5?-phosphate (PLP)-dependent manner. The family also includes QbsE that functions as the sulfide donor for the biosynthesis of thioquinolobactin in Pseudomonas fluorescens. A JAMM motif protein QbsD catalyzes removal of the carboxy-terminal dipeptide from QbsE. Both CysO and QbsE are similar to prokaryotic sulfur carrier proteins such as ThiS and MoaD, containing the beta-grasp ubiquitin-like fold.	5.38516e-23
NZ_CP017749.1\|WP_071021312.1\|2245518_2246487_+\|chemotaxis-protein-CheV	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	2.10753e-39

>NZ_CP017749.1|WP_071040448.1|2241502_2242096_-|N-acetyltransferase
MQPPPRPLELRIDVSHGPAETERDIDAVHDRLCRPDGALHGMPSLACGVPGLRLRYREADGEYYIYVEDVARGRLAGYTVFNRLVEVDRRADRHLRAPHSKYALDYQRRGLASAIYRWALDGGLCLITGARQSAAAHALWMRLAAHYPLGYVELRDKALRYLGPAVTPVVLDDLHTRMILLGRGWTLDTLAGATGMR
>NZ_CP017749.1|WP_071040446.1|2240847_2241366_+|multidrug/biocide-efflux-PACE-transporter
MQQAQPKHRASPSRPRPDTPKTLAERLAHALSFELTAIVLCAPVVSWVLGLSLVHVGALTALVSLIAMAWNVAFNAVFERIERRFGLVRNVAVRIVHAIAFELGLIALVLPLASWWLEISLLEALLLDLGILLFFLPYTFFFNLVYDRLRARRIERKARKARKAWKAGEART
>NZ_CP017749.1|WP_071021324.1|2239760_2240645_-|LysR-family-transcriptional-regulator
MRHSPEALLAFAEAASLGSFSAAARKLGKRQSTISEAIANLEIDLGVQLFDRTARQPRLTDAARALLPEVLRVLEASEAIDQLAARLAGGEEARLTLVVSDTYQSSRYEETLAELERRFPTLELECQNAEHDDVIDLIQQGRAQLGLMAARSSYPPDIGAATVAEQAEIGLYVGLQHPFAAYGDGEVPLAALHEARELRLHTYVAPRGAPLETGLVAGRRWWSAPSYLMLMEMALAGFGWTELPRRMVEHFARGRLLELHARGWPRRMPVDAVWSRERPLGPAGSWVLERMLAP
>NZ_CP017749.1|WP_157128551.1|2238193_2239726_+|MFS-transporter
MPDSFRSRACLPACAGTTLYPASPASPASPASPASPASPASPASPAPPPLLREAPGPAVAPRGTATLWVLSAGMFMAILDTNIVNVAMPAMRAGLGASLSELAWIVDVYNLSFAGLMLSAGLLADRLGARRVFLGGLALFLLASALCGLAPTVAALVGARALQGAGAALFLPSSLALLRAAYPDAAARARAVGVFGGLVATAAAAGPVLGGIVLAPLGWRGAFLVNLPAGLLALLAGPRVLAALPARPGRGADRAGQLLGMAALGAASFALIEGPARGWLSPAVGLAALAALVSALAFVQVERRGAAPMIPARLFADPALGGANWVGFVIGAAYFGCLFLLSLYLQQGLCMTPLHTGLSLLPLALCLTAGNVIAGRLLPRLGARRQIAAGLALAALGYLLCALATLHGGLAALLAAMLPLAAGTALAIAPMTATVLERAPSDLAGTASAVLNATRQVGALAGTAGAAAILAIAIGAGGDAGAAMRLGACAAALLSVAGIAGALRIGARPH
>NZ_CP017749.1|WP_071022800.1|2237156_2238020_-|LysR-family-transcriptional-regulator
MNWDNTRYFLAIARSGSLRGAAASLEVDQATVGRRLAAFEEELGATLFLRTPQGYVLSQAGEMMLADAEQMESAAEAIGRKSALADRLLAGPVRIATTDTLAEGFVLPALAALQRRHPELEYTLLTATELVDVAAREADLAVRGLRPQAGNVIIKKLGVVEMGLYAAPDYLARRGKPRRGAGLSGHDLLMFPRDTVPRHWQELGGESLRGAHVALQSNSQMALRSAALRGMGIALLSAFLAERDSGLVRIFPDRRDWVDIWLVLHPDLRRVARVRAVIEALAGAFKR
>NZ_CP017749.1|WP_157128550.1|2236881_2237052_+|hypothetical-protein
MQIYLETHLRKTPAVARTSAARPTRPLLARLQAFLDAGWQRNLHHAQALARVYANR
>NZ_CP017749.1|WP_071039608.1|2235066_2236449_-|NCS2-family-permease
MMDQSIPSPTELDAASAPPQRKLDRYFEISARGSNTRQEVVAGITTFMAMVYAVFVVPGMLGKAGFDTSAVFVAVCLTTAFGSLLMGMWARLPIAIGCAISLTAFVAFGLVLGQKLTPSVALGAVFLMGVVFTAISVTGVRSWILRNLPAGVAHGAGIGIGLFLLLIASNDVGLVVKNSGAGLPVTLGKITAFPVVMSVLGLAAIFGLERRRVPGGILLVIVGISALGLAFDPAVKFTGVFALPSLSAPGHAALIGAMDVRGALSAAVLPSVFALVMTAVFDATGTIRAVAGQAGQLDASGHIRNGGRALTADSVSSIFSAFFGGAPAAAYIESTVGVAAGAKTGLAAVVVGLLFLAVMFFSPLAGLVPSYATAPALMYVGLLMLSSVSRLHMEDTVDALAGLVCAVFIVLTCNIVTGIMLGFCTLVVGRIVAGEWRKLNVGTVAIAVVLAAFYAGGWAI
>NZ_CP017749.1|WP_071021333.1|2234317_2234899_-|class-I-SAM-dependent-methyltransferase
MPSFSDPWLHPWLPAISARSTTSPVLEIGCGHGDDTAVLADAGLRVIAFDLSRAAVAAARLRVPSAQIECRDIRAPFPPQASELGAVIASLSLHYFPWDETVSIVQRIRDAMRPGGWLLCRLNSTEDHNFGAGQGVRIEENYYSVDGQPKRFFDEEAVCRLFDGQWQRVSMTHQRTRKYVRSKALWEVVVERV
>NZ_CP017749.1|WP_071039607.1|2232672_2234190_+|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MSSIQHAIEHYIGGRRTVGASGRSQEVTNPASGQVTGHVALAGVAEVNAAVAAAAAAFPAWAGTPPIRRARVLFRFLELLNRDKDALAHAITAEHGKVFTDAQGEVARGIDIVEFACGVPQLLKGDYTAQVSTGMDNWTLRQPLGVVAGITPFNFPVMVPMWMFPVALATGNTFVLKPSPTDPGPSLMIADLLKEAGLPDGVFNVVQGDKVAVDALVEHPDVRALSFVGSTPIASYIYETGAHHGKRVQALGGAKNHMVVMPDADIEQAVDALIGAAYGSAGERCMAISVAVLVGDVAERLMPRLVERARSLKVLDGENLAAEMGPIVTRAAHARITGYIERGVAEGAKLLVDGRDFDPASAGPGCAGGFWMGGTLFDHVTPEMTIYKEEIFGPVLSCVRVKDMAEAVRLINAHEFGNGVSCFTRDGNAAREFGQQIEVGMVGINVPIPVPMAWHGFGGWKRSLFGDMHAYGEEGVRFYTKQKSIMQRWPESIEKGAEFVMPTAK
>NZ_CP017749.1|WP_071039606.1|2231596_2232565_-|LysR-family-transcriptional-regulator
MKAKNKEEIWGHLHWLTVLAQQGSYTAAAAYLNVTKGAVSQRIADLERAAGVPLVQRTTRSVRLTDAGQRLVEEVGAPFEQIARSFAGVRDTAGEPRGVLRVTAPVAFSRQQLVPRLAGFFERYPDIRLELELSDKLRALALEGFDLAIRHTMAPPDTHVAWALCPTRNVLVASRAYLRRRGHPATPADLAGHDCLYYPRTRETPAWHFVEARPGAGQARPRVTVPVSGPFCATNSEALRDAALAGLGIALVPDFTAQSALQGNKLVEVLDEWLPVGAFPDQIFAIRPYAAHVPRAVSVFVEWLRTALQGGFAPAARVRREA
>NZ_CP017749.1|WP_157128552.1|2243353_2243497_-|hypothetical-protein
MRAHPYRTAPTRQPLPGVRACAGGRAAGRGQRTPARAGRHFLLAVLS
>NZ_CP017749.1|WP_071039611.1|2243863_2245027_+|glycosyl-hydrolase
MASSIAGSAAPHDGKTTLLVATRKGAWLYRADAARQQWVPDGPHFLGHIVHHLVLDPRDRRTLLAAARTGHLGPTVFRSTDGGRHWREATRPPAFARAEAGQEARVVDHVFWLAPGHADETGTWYAGTSPQGLFRSEDGGDTWAPVSGFNDHPMRPAWTGGAQDGTPDGPKLHSILVDPRDARHLYIGMSSGGVFESTDGGAGWAPLNAGCAADFLPPPPPEFGHDPHRVLLHPAAPDILYQQNHCGIYRMDRREGIWRRIGEAMPAEVGDIGLPIVAHPRDADTVWVFPMDGTDVWPRVSPQGRPAAYVTHDAGRSWQRQDRGLPAQQAWFTVKRQAMATDACDPVGLYVGTTGGEIWASADEGGNWSCLAQHLPEIYALETAVFA
>NZ_CP017749.1|WP_071021315.1|2245068_2245329_+|molybdopterin-synthase-sulfur-carrier-subunit
MKVMICSVLHSYTGGQPVVEAAGTSVAALLDDLERRYPGMRFRIVDEQGGLRPYMRVFVNRSQAMRLDAPLGESDEVHILQALAGG
>NZ_CP017749.1|WP_071021312.1|2245518_2246487_+|chemotaxis-protein-CheV
MSSSSAMREVDERTNLTNNNQFELLLFRLGDSNHSGQSEWFGINVFKVREILVMPTVTTVVGAAPAVLGMADIRGQVIPVIDLPKLVGCTPRSGLNILLVTEYARSTQGFAVEAVEEIVRLEWSQVVSAETSVKGDLVTSIAKLDAESDNPRLVQVLDVEQILRDVLPTRQPDVDPATVGPRLSLRPGARILAADDSAFARSLIEQGLQAMGVQVVMTKTGQEAWDVLGEIADQAAGSGKSVQDEIALVLTDLEMPEMDGFTLTRKIKGDARLKSLPVVIHSSLSGEASEEHVRKVGADAYVSKFLAKDLAETIRGVLARHA
>NZ_CP017749.1|WP_071021310.1|2247057_2248707_+|STAS-domain-containing-protein
MTALREAWRAGLFRRGNWLPNIVSGLIVGVVALPLAMAFAIASGARPAQGLYTAIIAGLLVSACGGSRVQIAGPTGAFIVILSGITARHGIEGLQIATLMAGIMLLAMGLARLGVVIKYIPAPVIVGFTTGIAVIIWVGQWRDFFGLPAVPGEHFHDKVWHLLQVLPQWHPATTGIALLSLALVVATPHIAPLRRVPGPLVALVVATALQAAFGFDGVATIGSAFGGISRGLPAFALPEVTPARVVELIGPAFTIAMLGAIESLLSAVVADGMAGTRHDSNQELIGQGIANIVAPLFGGFAATGAIARTATNIRNGGNSPLAGITHAVVLMLVLVLLAPLAASVPLAALAAILFVVAYNMSEVRHFAAMVVRAPRADVAILLITFVLTVFADLVVAVNIGVILAMMQFLRRMAASVEIARQDHGALGRELGAVPALPPGTLVYAIEGPFFFGAVENFERALVQTHTDPRCLVIRLRRVPFMDITGLQTLIEVVGKLRRRGVAVVLCEANARVRGKLARAGVMSALGEGNYVDSLEAALERCRVLRAAAA
>NZ_CP017749.1|WP_071021308.1|2248761_2248965_-|CopG-family-transcriptional-regulator
MESKTARLTVLIDPVKKKAFETLCASQDLTPSQVVRQLIRDYLQHHGVEYATKARAPAASTGRKRAG
>NZ_CP017749.1|WP_071039612.1|2249823_2250927_-|2-oxo-acid-dehydrogenase-subunit-E2
MRIFKLPDLGEGLQEAEIVAWHVAEGETVAADQPLLSVETAKAIVEIPSPFAARLARHYAAPGDIVHLGAPLAGFEGAGEDDAGTVVGTVAVGSQVVAEAPAPLAGGGAGAVRAAPAVRALARKLSVDLAMVTPSGAEGVITAADVERVAKALAETGPAEVLRGVRRAMAQNMARAQSEVAAATVMDDADVQAWPPGTDATMRLVRALVAGCRAEPGLNAWYEGGSGRRHVLQKIDVGIAADLPEGLFVPVLRDAGRRDAADLRQGLERMRADIRARTIAPEEMRGNTITLSNFGMIGGKYAAPIVVPPTVAILGAGRMHDAVVAAAGAVAIHRLLPLSLTFDHRVVTGGEAARFLAAVIADLALPD
>NZ_CP017749.1|WP_071039613.1|2251006_2251984_-|alpha-ketoacid-dehydrogenase-subunit-beta
MAEIHLVEAVNQALAHELARDPSVVLLGEDIGVNGGVFRATVGLQARFGAQRVIDTPLAESGIAGAAVGMAAMGLKPVAEIQFTGFIYPAIDHIINHAGRLRHRSRGRLSCPMVLRSPFGAGIHAPEHHSESPEAMFAHMPGIRVVIPSSPARAYGLLLAAIRDPDPVIFLEPTRLYRLFRQEVADDGQALPLDACFTLRDGSDLTLVSWGAMLQETLAAAGQLEQEGISAAVIDVATLKPLDLDTILASVARTGRCVIVHEAPRTAGFGAEIAAGLADAGLYSLAAPVLRVTGYDTVVPLARQEALYMPSVARIVDAARRAMAA
>NZ_CP017749.1|WP_071021300.1|2252093_2253176_-|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha
MGTVASFEIGYTQYLDARGEPKQDLPAFARDPAALLPLYRAMVLARQFDLKAIALQRTGKIGTFASAIGQEAIGVGVASAMRPEDVLVPSYRDHAAQFVRGVTMTESLLYWGGDERGSHFAAAPHDFPNNVPIATQVCHAAGAAYAFRLRGEARAAVCLLGDGGTSKGDFYEGMNLAGAWRVPMVLVVSNNQWAISMPRAAQTAAQTLAQKAIAAGVPGRQVDGNDIVAVRQAAAQALERARAGDGPSLIEAITYRLGDHTTADDASRYRDEASVKAHWAQEPVLRLRNYLASLGAWDAAREEALIKDCAQQVAQAVEAYLATPMPAPAAMFEHLYATLPAALAGQLAMAQRFAGTDTPP
>NZ_CP017749.1|WP_071039614.1|2254334_2255090_+|hypothetical-protein
MHENKNDAPTSKVFYRPIEASIRWAGLLRYEQVILASISSPRNLPLSLDCPRWGELRLYTERIYDGILNGELPFGRDGITTHDTELIDSFDLTIRHVDLKRWMRQHYPEQRPGFLFSRSERITHPFISLETGQAMLVEQLALRSALEQSKRQLRELQDKHDALLKQSTVIPACAQCPISDRAEATYLNIIGGMLELMLGQSPSGAPYSSFKTQEAVVSALVAHHHGVMGIAERTLNGKFATARRRLHSAIL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP017749_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017749_2

3082763-3082865

Orphan

Consensus_repeat	Method
AGTTCGACCCCTACAGCCAGGGTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017749_2

>merge|NZ_CP017749|2|3082763-3082865|CRISPRCasFinder
AGTTCGACCCCTACAGCCAGGGTGCCAAGGCTGGCGAGAAGTTCGATCCCTACAGCCAGGGTGCCAAGGCCGGCGACAAGTTCGACCCCTACAGCCAGGGCGC

>NZ_CP017749|2|2|3082763-3082865|CRISPRCasFinder
AGTTCGACCCCTACAGCCAGGGTGC	CAAGGCTGGCGAGAAGTTCGATCCCTACAGCCAGGGTGCCAAGGCCGGCGACA
AGTTCGACCCCTACAGCCAGGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017749.1\|WP_071020010.1\|3089118_3090303_+\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223476
NZ_CP017749.1\|WP_071020035.1\|3072493_3073474_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP017749.1\|WP_071020016.1\|3086981_3088727_+\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP017749.1\|WP_071039993.1\|3073477_3076264_+\|ribosome-associated-ATPase/putative-transporter-RbbA	unknown	unknown	gnl\|CDD\|224054
NZ_CP017749.1\|WP_071020027.1\|3079110_3081180_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	unknown	unknown	gnl\|CDD\|236645
NZ_CP017749.1\|WP_084085499.1\|3083073_3084780_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP017749.1\|WP_071020036.1\|3069265_3070513_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|225715
NZ_CP017749.1\|WP_071040542.1\|3070699_3072253_+\|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein	unknown	unknown	gnl\|CDD\|225098
NZ_CP017749.1\|WP_071020024.1\|3081532_3082456_+\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270406
NZ_CP017749.1\|WP_071020013.1\|3088734_3089106_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|235094
NZ_CP017749.1\|WP_071020002.1\|3092211_3093264_+\|bifunctional-UDP-4-keto-pentose/UDP-xylose-synthase	unknown	unknown	gnl\|CDD\|183375
NZ_CP017749.1\|WP_071020039.1\|3068563_3069040_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP017749.1\|WP_071020042.1\|3066573_3068559_-\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|377393
NZ_CP017749.1\|WP_071020029.1\|3076266_3077394_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP017749.1\|WP_071020017.1\|3086101_3086671_+\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|225786
NZ_CP017749.1\|WP_071039995.1\|3091270_3092215_+\|formyltransferase	unknown	unknown	gnl\|CDD\|235902
NZ_CP017749.1\|WP_157128588.1\|3084979_3085885_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017749.1\|WP_071040543.1\|3077558_3078932_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP017749.1\|WP_071020008.1\|3090281_3091283_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|182669
NZ_CP017749.1\|WP_071020001.1\|3093275_3094166_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200564

Protein	Function_ID	Function_description	E-value
NZ_CP017749.1\|WP_071020010.1\|3089118_3090303_+\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	gnl\|CDD\|223476	COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane].	7.12771e-153
NZ_CP017749.1\|WP_071020035.1\|3072493_3073474_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	9.25909e-29
NZ_CP017749.1\|WP_071020016.1\|3086981_3088727_+\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	2.5251e-64
NZ_CP017749.1\|WP_071039993.1\|3073477_3076264_+\|ribosome-associated-ATPase/putative-transporter-RbbA	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.80114e-91
NZ_CP017749.1\|WP_071020027.1\|3079110_3081180_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.24865e-118
NZ_CP017749.1\|WP_084085499.1\|3083073_3084780_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	3.50275e-106
NZ_CP017749.1\|WP_071020036.1\|3069265_3070513_-\|MgtC/SapB-family-protein	gnl\|CDD\|225715	COG3174, COG3174, Predicted membrane protein [Function unknown].	5.86091e-52
NZ_CP017749.1\|WP_071040542.1\|3070699_3072253_+\|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein	gnl\|CDD\|225098	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown].	9.10385e-90
NZ_CP017749.1\|WP_071020024.1\|3081532_3082456_+\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270406	cd13688, PBP2_GltI_DEBP, Substrate-binding domain of ABC aspartate-glutamate transporter; the type 2 periplasmic binding protein fold. This subfamily represents the periplasmic-binding protein component of ABC transporter specific for carboxylic amino acids, including GtlI from Escherichia coli. The aspartate-glutamate binding domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.03881e-97
NZ_CP017749.1\|WP_071020013.1\|3088734_3089106_+\|EamA-family-transporter	gnl\|CDD\|235094	PRK02971, PRK02971, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional.	3.70523e-06
NZ_CP017749.1\|WP_071020002.1\|3092211_3093264_+\|bifunctional-UDP-4-keto-pentose/UDP-xylose-synthase	gnl\|CDD\|183375	PRK11908, PRK11908, bifunctional UDP-4-keto-pentose/UDP-xylose synthase.	0
NZ_CP017749.1\|WP_071020039.1\|3068563_3069040_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	4.06177e-14
NZ_CP017749.1\|WP_071020042.1\|3066573_3068559_-\|FUSC-family-protein	gnl\|CDD\|377393	pfam04632, FUSC, Fusaric acid resistance protein family. This family includes a conserved region found in two proteins associated with fusaric acid resistance, FusC from Burkholderia cepacia and fdt-2 from Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.	1.28394e-172
NZ_CP017749.1\|WP_071020029.1\|3076266_3077394_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	4.6005e-24
NZ_CP017749.1\|WP_071020017.1\|3086101_3086671_+\|HdeD-family-acid-resistance-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	2.00564e-25
NZ_CP017749.1\|WP_071039995.1\|3091270_3092215_+\|formyltransferase	gnl\|CDD\|235902	PRK06988, PRK06988, formyltransferase.	0
NZ_CP017749.1\|WP_071040543.1\|3077558_3078932_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	7.46086e-60
NZ_CP017749.1\|WP_071020008.1\|3090281_3091283_+\|glycosyltransferase	gnl\|CDD\|182669	PRK10714, PRK10714, undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional.	1.00594e-114
NZ_CP017749.1\|WP_071020001.1\|3093275_3094166_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200564	cd10939, CE4_ArnD, Catalytic domain of Escherichia coli 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD and other bacterial homologs. This family is represented by Escherichia coli 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD (EC 3.5.1.n3). ArnD plays an important role in the biosynthesis of undecaprenyl phosphate alpha-4-amino-4-deoxy-L-arabinose (alpha-L-Ara4N). It catalyzes the deformylation of 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol. The ArnD-dependent deformylation likely occurs on the inner leaflet of the inner membrane. This family also includes many uncharacterized bacterial polysaccharide deacetylases. All family members show high sequence homology to the catalytic domain of bacterial PuuE (purine utilization E) allantoinases and Helicobacter pylori peptidoglycan deacetylase (HpPgdA), and are classified within the larger carbohydrate esterase 4 (CE4) superfamily.	2.69778e-143

>NZ_CP017749.1|WP_071020024.1|3081532_3082456_+|amino-acid-ABC-transporter-substrate-binding-protein
MPFFAVPVRAAMFRRLGAFASLATVAAAFAMPAQAQSPVLQKIRDTGTITLGYRESALPFSFADDKGQPAGYAVDLCLRVAEAAKQKLGLPELKVRWLPLTPQNRVPAVVNGLVDLDCAPNTNTLERQKQVAFSVSHYVSTVRLLVRADSGIHSFADLRGKTVVTSAGSTGDRHVRRLKAEYGYRDVYAKDHGESFLLLESGRAQAFVMDDVLLAGLRARAKDPSQYVIVGPALSVEQNALMMSKADPAWKQLVDQTLAKMFAGPDIAALQKRWFQEAIGARGVNLALVPSDQVRAAWKHPSDAVTE
>NZ_CP017749.1|WP_071020027.1|3079110_3081180_+|bifunctional-diguanylate-cyclase/phosphodiesterase
MLASSYDQLLVLFSVLVAMLASYTALDLAGRLTAARGRAAQMWLLAGAVVMGLGIWSMHFVGMLAFRLPIRLGYDLPITLLSLLIAIGASGFALRLVTLPSLPPSRLALGALLMGGAVAGMHYTGMAAMRMRPGIDYEPWWFALSLVIAVAACGAALWIAFRLRHQGRHTHRLRVGAAVLMGLAIAAMHYTGMAAARFPLGTICGAATDGLAGEALALPILVITICVLTMALLTSILDLRMEMRTAVLAASLAAANEELSYLALHDKLTKLPNRALLEDRFEQALRSAARTRSRLAILFIDLDGFKAINDSFGHQIGDQVLAEAAGRIRASAGAGDIVGRLGGDEIVLVSQSDAPEDAGALAARILGSLRDAITVSGHALHISASIGIALYPDNGTDQRTLLRNADAAMYHAKASGRDTCCFFTHSMNADAQARLELAQDLRMALERHELELHYQPKFQAPDNTVCGAEALLRWRHPRRGLLSPDQFLALAEKTGLILPIGTWVLDEACAQLARWHAEGRAQLTMAVNLSATQFCHPALVGTVRAAIERHGLAPQCLTIEITESTAMRDVETSLAILQRLDEMGVRIAIDDFGTGYSSLLYLKRIPASELKIDRGFVRELAQDGEDAAIVSAIIALGQTLNLKIVAEGVETTAQQDFLTRLGCDTLQGYLLGAPVPAVDFPGQAIPAAA
>NZ_CP017749.1|WP_071040543.1|3077558_3078932_+|TolC-family-protein
MAACSTVQVDMPAAPAAPAAFQQVPQAGGSQADLARWWQDWHDPELTRHVEAALRANTDLRVARARVLEARAWAAVADSARYPTLAAQAGAARGFGDLRSPSPVPDRSPDLEAYAGGVSAAWEVDVFGRRASDAEAAAGMALAAEEQLHGVQLAIAADVAQNYLEAQGLQRRLALLDRSLATLGELERYVQARFRAGQALGYDLERVREQVSAREAERPVLQSQIEVRQRRLAVLEGQAAQSAPALGEPGPFHVPPVPAGELPSSVLDRRPDVRASAALVRAQAARLGSAKAELLPRFYLSFVGLDGRIRIDGLPALSGTGGLLGVGVDLPLFNAGRIRSTIAANDARLQAALAEHDKTVLRTLEEVDSAYGVRSGLDQREARLGGTLAIARRNADQSRRLYEAGRRTFEDVLSARLGALQREDELLQAQTGQALATVQLYRALGGGWSPAAGAAAG
>NZ_CP017749.1|WP_071020029.1|3076266_3077394_+|ABC-transporter-permease
MRQWLKNVARLSRKEIFSLFSDATLMILIVFAFTLAVVSVAKGIKAEVSNASVAIVDGDQSALSRHLRDAIQPPYFKPPVDVDRRAIDAELDRGRYIFAIEIPPDFEANVLAGRSPSLQVLVDATAMTQAGLGAAYLQEILTGETLAFLRARNLQAQLPAVAVMRVQFNPNTESYWFTSTMQIVVNITVLSIILVGAAVIREREHGTIEHLLVMPVRASEIAAAKIIANGSVIFLVSLLSLWLVVNLWLRVPLQGSLALFALSTALYLFSVTALGMWLATLAPAMPQFGLLAVPTYAVAYLLSGAATPVQSMPAAMQPVVQFLPTTQFVTLTQAILFRGAGIDIVWPQLLGVTAAGGLFLALALARFRAMLAQQG
>NZ_CP017749.1|WP_071039993.1|3073477_3076264_+|ribosome-associated-ATPase/putative-transporter-RbbA
MAMSGGALPGAIEITGLAHRYGAVQALETVSLTLPGQSTIGLIGPDGVGKSTLLGLIAGVKRIQQGQVSVLGADLRERARREAILPRVAFMPQGLGRNLYPTLSVYENVDFFGRLFGLDGAARAARIRRLLEATGLAPFPDRPAGKLSGGMKQKLGLCCALVHNPDLLILDEPTTGVDPLSRRQFWTLVDELRAEQRGMTVIVATAYMEEAQRFEHLVAMDAGRVLVSDSTAAVLQRAGTRDLEQAYISLLPPARRGDGAGLQIPPRPPVDGEPAIEAEGLTRRFGDFVAVDHVSFRIERSEIFGFLGSNGCGKTTTMKMLTGLLDASSGSARLLGQPIDATDMRTRMRVGYMSQSFSLYEELSVRQNLDLHARLYRMEGEQAQQAVAQALDGFELAPYADERPAALSLGIRQRLQLAAACLHRPEVLILDEPTSGVDPGARDMFWRHLVKLSREARVTIFVSTHFMNEAARCDRISFMHRGRVLAVGTPEALRRQRDAATLEDAFVDYLMEAEGQDAPAATPAAAAAGTKATTGPAGHGLPGGDAAAPAPSALAAPLARIWAFARRESIELARDKLRLAFAILGPVILLLAAAWSVSFDVENVRFAALDRDQSLASRELLEQFAGSRYFVPAGTVRDETEAQQALRAARASLVVEIPPDFGRELLAGRRPEVAFHIDGSSPFPGATVRTYANAVLLGYVQARARALPVAAPALPMGVETRFVYNEQFRSIYAISPGIVMLALILIPTMLTALGVVREKEMGSITNLYASPAGVGEYLLGKQLPYAGLAMVAYLALVALTITVLGVPLKGSFLALSLGALLFILAATSLGLLVSTFVRSQVAAIFGTAILCLIPSVNFSGLLYPVSTLTGSGYWVGLGFPSSWFQLVSLGSFTKGLGADSFGAMYLALLGFALAYLAGARCLLRKQEA
>NZ_CP017749.1|WP_071020035.1|3072493_3073474_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKNRFRWALLGLLVILLAGAGFWWETAHRTRWPADIAYANGRLEMARVDVAVKYGGRVVELPVHEGDVLAAGALVARQDDSELRAQLAAANAARARAADAMLRARAETDGRAARQRLARLEWSETVKLFDEGQVSAVERDRRRLALEGEQAGVDGAHAALGEARAAEAEAEAQIARLQAVLDETAVRAPVAGRVEYRVVEVGTVLPAGGRVASMLNPDDIYFTIFLPGPQAGRLAIGAAARILLDAFPGEAIPARIGYVASEAQFTPKYVETEGERAKLMYRVKLQLPVEVARRLAPRLKAGMTGAGYVRLDAARSWPPALAVRGE
>NZ_CP017749.1|WP_071040542.1|3070699_3072253_+|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein
MDDGALTRALMHGAAYPHAAPGVRCIETHLSRVFLAGEYAYKVRKPVRFDFVDFSTLAARRADCEEELRLNRRLAGALYLDVVPIAAVAGGAGGHEDREADGNTPVRLGGSGPALDYAVRMRRFAQHDLLAARVQAGNVDGAMMDALGRRLADFHADAPRCGSTDATDYGTPARVAATLEECLQGVARLADADGAEAIQCLDRAMRSEALRLAPAMAARRRSGHVRECHGDLHLGNVVVVDGEALPFDCLEFNAGLRWIDSISDTAFLYMDLIHHGRRDLAYRFLNAYLERGGDYAGLGLLPFYAALRALVRARVGLERRHQCAAAGADAAPAAGWRALLELAETLLSRRRGAILLMHGLSGSGKSTVAARLAERGGMVRVRADVERKRPGAPPAGGWYAPAAGAATYRRLLAACRLGACAGFPMIADATFLARARRECFAAQAARLRLPFVIVHCEATVDTLRARISARAQARNDPSDADLEVLGRQLREQEPLCAAELRATTSASDADTLAARFA
>NZ_CP017749.1|WP_071020036.1|3069265_3070513_-|MgtC/SapB-family-protein
MEHDYVAFSVALGIGLAIGLERERSNAGGDEQVPAGLRTFTVASLAGAVAARLPGPLVLPAVLLATGALACLAYHRTSDRDPGMTTELALLCVVLLGALATSEATLAAGAATVVLLLLHGKAWLHHFARQILSEQELRDALVLAAAALVVWPLLPDRYLGPFKAWNPHTLWLIAVLVMLMGAAGHIAVRWLGSQLGLPMAGLFGGFVSSSATIASMAALARKEPDKAQAAVAAALLSTVSTFVQMILLLAATSLATLRQLAIPLAAGLAVIAAFGGLWAWRSTHAEQAPEESPQGRAFDWRVAAGFALMTAFLLWLAAAAQAWLGATALVAVAAVAGFADAHAATASIGAQVAAGRLPVGSAMWPVLAAFSTNTLTKIGLATAAGGYRFALQVGAGLVAAAGATWLGTLAALSLS
>NZ_CP017749.1|WP_071020039.1|3068563_3069040_-|winged-helix-turn-helix-transcriptional-regulator
MNSIDALRFAFTGQLMLAGRQWRQISQAAVTSYGISAAAAGPLLFIRRLGGGVRQVTLADYVGLEGASLVRLLDQLSAAGLVRREVDASDRRANALWLTEAGEELAAKIEVDLKRIRSQVFAHIPAQDLEGALRVLDALARAADSVVVPQSPAPSQEA
>NZ_CP017749.1|WP_071020042.1|3066573_3068559_-|FUSC-family-protein
MGSTWPSARDWIFSTKAFVASMLALFIALYIGLPRPYWAMATVYVVAHPLTGATRSKSMYRVLGTLLGAAASVALVPSLVNTPPLLMAAVAVWVAVLLYVALLDRSPRSYLFMLAAYTLPMVALPAVDHPGGVFDLAIARSEEICLGIICASVVGAVVFPAKVSNVLRDRLAQWMGDAAQWAGDMLSLRDAGAAVSLHQSRHRMAADILALDQLISQLSYDTETAARIRDAKELRGRMTMLLPVLASLASLVETMQRDEAGVPDQLAARMTAVSAWIRGEAAAPPALEENTPPALATAVASTAYERLRELTALWQDCVALQRRLGEAAPAGDWQPVFRRWNVGAARHYDHGMLLFSTGTTALGIFCMGMVWILSGWADGASAVALGAVSCCFFAALDEPAPMIRSFFIWNVVCVLLAMVYLFMILPRAHDFEMLVAMFAIPYLLFGVMIAQPRLALIAVPLAMVTATDIGLQGSYNADFQTFFNTNVAGVAGILFALVWTLLVRPFGTAAAARRLVRASWGDIARNATGRAPHEHDHLRARMLDRLAQLVPRLAASENERSTDGFTEVRVELSTLALQRELPALPEASQHAVRRVLQSVAGYYRDRLEAKADAPPEALQRRLMRAMQGVAERADQASRTAMSALVEMEVALFSTSPVNGKQ
>NZ_CP017749.1|WP_084085499.1|3083073_3084780_-|HAMP-domain-containing-protein
MRDRRIADSHCLTDPYNNAPQAEGVTVKLSSLTIKTKLLLGFGTLAAIAIVICAMSLRALSQTTEAFSAYIHGLDARAEMAVKVRTAVDRRAIAARNLVLVTQQADLDIEKADVAQAHEDVKNNLRRLKEMALSAPAGAQELVAEIDRVETRYGPVALDIVSLALAKRNDEAIAKMNNECRPLLAALVKATEAYAAFTRTRQEETIRQMEADYALQRQLLIGISIAAVALAVIGGLLLTRAITRPIERAVDAARAVAQGELGQRIDVESDDETGRLLRALRDMTARLAQIVNGVRDSSGRITGATGEIAAGNVDLSARTEQQAASLEETAASIEELTVTVRQNSENAREASTLAHDAADVAQKGSTAVGRVVDTMQQISASSEKIAEITGIIEGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSAAKEIKELISVSVQQVHAGSTLAGEAGETMGVVTQAVARVNRIIEEIAQASGEQSRGIEQVNQAISQIDHVTQQNATLVSEAASASRAMEEEARRLKEAVAFFRLPVARSGGRLAPAEHGSPLGDHPDYAAA
>NZ_CP017749.1|WP_157128588.1|3084979_3085885_-|hypothetical-protein
MKKKSLHGLPLALAWLYLWAFAPASAQALDGRGAQAAAGGAGEAPAIAVPPARAVLCDAPWFRSGARVQMEGDGAMPMSITMTLRDTDQTPQGCRAVLEVMSKSALSALMGPPVVMDQVHEVSIDRHPNETAPDAASEIESQHAVINARGRYARMFGEAAFKGKGVFSYAGMDIREGTTLAGETFESSVALDISPAGSDEVVGSMRALHASIIVGSRRVGKRQVIDTVLGRKSCLPITYDKRTSLGPLMVGDEVIQVEPTVMHITDWYCPTEAFVLRTDIRQLDQLQRIDVTSMTLDSGDN
>NZ_CP017749.1|WP_071020017.1|3086101_3086671_+|HdeD-family-acid-resistance-protein
MLLYYAKLWWVVALRGIFAVLFGLCAFFAPIATLAVLILIFGAYAAADGVVALAMAISGKERDGSDRWILALQGVLGLGIGALTLFNPAVTALSLLLYIAAWTLATGVLQIVAAVRLRKEIPNEWWMILAGLASIALAFLLLWNPVAGALAVLWMIASWATVCGILLIGVAFRLRRAHHDHLHGKPLAA
>NZ_CP017749.1|WP_071020016.1|3086981_3088727_+|glycosyltransferase-family-39-protein
MRSSSTSRYAGLPVAAIALVSLFILLVWFGTLDARHLLRSDEGRYAEIAREMFASGDWVTIRYNDLKYFEKPPFHMWVTALTYTLFGLGDWQARLCVALSGMIGLVASMMASTRWFGARAGLLTGLVLVAAPMWSVAAHFNSLDMTLSGAMACVLAFMLLAQHPDASPAARRGWMWACWLAMGVAILTKGLVGIALPGLVLVLYTLISRDFALWRRIHLFSGIALMLVVTVPWFWLVSERNPEFPQFFFIHEHWQRYTSKVHSRSGPVYYFVPLLIAGFLPWLGLFPRMWQVVRGEGQALRSGARPFRPALLTAIWAIAIFVFFSLSDSKLPGYIVPIFPALGILAGSALEHITERSWRRQMLAMAVICAIGLAASPYVATLNSDNTPNALYRPFAVWVGAAFVALLAGIWLSYRVLRRRGVFASVVTYSVAMFCGFTIALLGHEVMGRKSSGADMVPAIKAVLTDDMPLYGVRMLDHTLPFYLQHTLVMVEAPDELDFGTKQEPQKWVPTLDGFVAKWQDGQHAMAIMGADTYEHLRQRHVTMYKIAQDTRRVVVSNFAPPGQAQAAPAASVEPAASAPQ
>NZ_CP017749.1|WP_071020013.1|3088734_3089106_+|EamA-family-transporter
MSLSTFAFIFTGVLLNACAQLLLKAGVNAVGAITLDRATLFATALRVLTQWPVLAGLTLYVVSVGVWIVGLSRVDVSIAYPMLSLGYVVNALAAWWLFGEMIGPLRVAGILLILAGVFLIARS
>NZ_CP017749.1|WP_071020010.1|3089118_3090303_+|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein
MSASVSPAEAFLPFVRPSIDEAAIAEVGKVLASGWITSGPKMQAFEEALSALFGGRPVRTFANGSATMEIALRIADIGPGDEVITTPITWVATANVVLTVGARPVFVDIDPRTRNIDLDAVEAAITPRTRAIMPVYLSGLPVDMERLYAIAARHQLRVIEDAAQAIDSRWRGQRIGAFGDLASFSFQANKNITCVEGGCLVMNSPEEALRAERLRLQGVIRTGMDGMDVEEPGGKFNLTDVNAAIGLAQLAHLDAITARRAALAETYFRCAEAAGLRDLGIGLPLPLDPHEATTNWHMFQVVLPVERFAGEHPLGARAAVMEAMREQGVGTGVHYPPVHLFSYYRSLGWREGMLPHAERIGRGIVTLPMFPAMRDADVERVCATLSETCKRLFK
>NZ_CP017749.1|WP_071020008.1|3090281_3091283_+|glycosyltransferase
MQTPLQMSPVEVSVIIPVYNEEDGLQALFDRLYPVLDGLGESYEIIFVNDGSRDRSPQLLAAQFHRRPDVTRVVLFNGNFGQHMAILAGFEHSRGKIVVTLDADLQNPPEEIPRLVASMREGHDYVGTIRRERNDSAFRRIASKAMNRLRERITRIKMTDQGCMLRAYDRNIVDTVNACREVNTFIPALAYTFSANPIEIVVEHEQRHAGESKYSLFQLIRLNFDLVTGFSIVPLQWFSAIGTLLSIASAGLVVLLLARRFLFGAEVQGVFTLLAFNFFLVGIMLFGIGLLGEYIGRIYQEVRNRPRFRIQAVLEAGPEGAARPASTEAPCAQ
>NZ_CP017749.1|WP_071039995.1|3091270_3092215_+|formyltransferase
MRAVVFAYHNVGDRCLRVLHARGVEVALVVTHRDRADENIWFRRVADTAAELGLPCIYGEDPADPALAEAVAAARPDMIFSFYYRAMIPQAVLSLAPRGAFNMHGSLLPKYRGRVPVNWAVLHGENETGATLHAMEAKPDAGYIVGQTAVPILPDDTAAQVFDKVTVAAEQTLWGVLPEMLAGRTPQHPNRLEQGSYFSGRKPEDGRINWSQPAAAVYNLIRAVAPPYPGAFTDLGGRRFVVAQARRPAPARQASLAAALQGGAPGLHVVQDSIVGLCGDGGLVLVHELQSDGATLAPAAFASLLTASTKEENR
>NZ_CP017749.1|WP_071020002.1|3092211_3093264_+|bifunctional-UDP-4-keto-pentose/UDP-xylose-synthase
MKKVLILGVNGFIGHHLTRRILETTSWEVYGMDMSSDRLGDLVEHPRMHFFEGDITINKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPSTSEVYGMCTDGEFDPESSSLVYGPINKPRWIYACSKQLMDRVIHAYGMEQGLNYTLFRPFNWIGAGLDSIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGEQKRAFADIADGISALMRIIENPNGVASGKIYNIGNPGNIHSVRELAEMMLKMAGDYPEYAEEAKKTQIIETSSGDFYGKGYQDVQHRVPKIDNTMTELGWKPEFNMEQALRRIFEAYRGKVVEARTLVDSAS
>NZ_CP017749.1|WP_071020001.1|3093275_3094166_+|polysaccharide-deacetylase-family-protein
MARIALKVDVDTLRGTREGVPALLNMLEKVRAEATFLYSLGPDHTGWALRRVFRPGFLKKVSRTSVVSNYGLRTLMYGVLLPGPDIGRRGAAQMRAAQAAGHECGIHTWDHVYWQDNVRGRDAAWTRRQMQSAFDRFVDIFGEAPPTHGAAGWQMNDEAFLQIDDWGMAYASDGRGVSPYIPTVGGRPCRHVQMPTTLPTLDELIGVDGLTEDNVHEAVLKLSADGRDHVFTLHTELEGGKLAPVFMRLLQGWRAQGHELVSMATYYRHLDRSTLPQLPVSWGSIPGRSGELIIQP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6006 : 18507

Pseudomonas_phage(36.36%)

integrase

attL 5244:5259|attR 22887:22902

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5244:5259	attL	NA	NA	NA	NA
WP_071038588.1\|6006_6801_+	nuclease	J7HXJ4	Pseudomonas_phage	9.1e-55	46.8
WP_071040255.1\|6830_8021_+	hypothetical protein	J7HXB6	Pseudomonas_phage	1.9e-64	51.5
WP_071038589.1\|8135_9038_+	hypothetical protein	I6XKU1	Burkholderia_virus	1.9e-93	52.2
WP_157128487.1\|9110_10001_+	cell division protein FtsK	A0A1Y0SUG1	Pseudomonas_phage	6.9e-11	58.3
WP_071038591.1\|10008_11748_+	AAA family ATPase	H2BD46	Pseudomonas_phage	5.4e-76	36.6
WP_071038592.1\|11747_11930_+	hypothetical protein	NA	NA	NA	NA
WP_071038593.1\|11926_12130_+	AlpA family phage regulatory protein	B7SYF9	Stenotrophomonas_phage	4.3e-09	53.6
WP_071038594.1\|12129_12444_+	hypothetical protein	NA	NA	NA	NA
WP_071038595.1\|12446_12698_+	hypothetical protein	NA	NA	NA	NA
WP_071038596.1\|12694_12967_+	hypothetical protein	B1GS76	Salmonella_phage	6.6e-05	38.6
WP_071038597.1\|12977_13352_-	TonB family protein	NA	NA	NA	NA
WP_071038598.1\|13415_15287_+	DNA cytosine methyltransferase	Q9ZXI4	Pseudomonas_virus	6.7e-173	62.0
WP_071038599.1\|15289_15814_-	hypothetical protein	NA	NA	NA	NA
WP_071038600.1\|15812_16457_+	hypothetical protein	H2BDG4	Pseudomonas_virus	3.8e-43	44.4
WP_071038601.1\|16459_16732_-	DUF1488 family protein	NA	NA	NA	NA
WP_071038602.1\|16764_17289_+	DUF1643 domain-containing protein	A0A142F2K6	Mycobacterium_phage	3.5e-23	42.5
WP_071038603.1\|17514_18507_+\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	2.8e-05	22.3
22887:22902	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3579477 : 3618469

Burkholderia_phage(50.0%)

head,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071040197.1\|3579477_3581445_+	selenocysteine-specific translation elongation factor	A0A2K9L516	Tupanvirus	1.0e-14	27.7
WP_071040198.1\|3581730_3582102_+	hypothetical protein	NA	NA	NA	NA
WP_071040577.1\|3582098_3582452_-	DUF1353 domain-containing protein	A0A1L2CVI8	Pectobacterium_phage	5.3e-15	47.8
WP_071040199.1\|3582475_3582940_-	hypothetical protein	NA	NA	NA	NA
WP_071040200.1\|3582991_3583192_-	hypothetical protein	NA	NA	NA	NA
WP_071040201.1\|3583188_3583539_-	HNH endonuclease	NA	NA	NA	NA
WP_071040202.1\|3583600_3585043_-	hypothetical protein	A0A0B4ZZU0	Achromobacter_phage	3.0e-56	35.1
WP_071040203.1\|3585058_3585445_-	hypothetical protein	NA	NA	NA	NA
WP_071040204.1\|3585504_3586002_-	lysozyme	Q3HQU9	Burkholderia_phage	5.5e-26	43.8
WP_071040205.1\|3585998_3586430_-	hypothetical protein	A0A0U5LBV3	unidentified_phage	6.1e-29	55.7
WP_071040206.1\|3586514_3586697_-	hypothetical protein	NA	NA	NA	NA
WP_071040578.1\|3586706_3587414_-\|tail	phage tail protein	A9YX14	Burkholderia_phage	8.4e-60	57.9
WP_071040207.1\|3588142_3588802_-	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	4.0e-72	58.2
WP_071040208.1\|3588803_3589985_-	hypothetical protein	A9YX12	Burkholderia_phage	6.2e-124	62.3
WP_071040209.1\|3589984_3590335_-	hypothetical protein	A9YX11	Burkholderia_phage	5.2e-39	71.8
WP_071040210.1\|3590343_3591069_-	hypothetical protein	A9YX06	Burkholderia_phage	7.7e-77	62.4
WP_071040211.1\|3591081_3591462_+	hypothetical protein	NA	NA	NA	NA
WP_071040212.1\|3591458_3592439_-	hypothetical protein	A9YX04	Burkholderia_phage	3.8e-95	62.4
WP_071040579.1\|3592800_3593262_-	hypothetical protein	NA	NA	NA	NA
WP_071040213.1\|3593270_3593840_-	hypothetical protein	A0A2H4YEU5	Salmonella_virus	1.9e-38	43.1
WP_157128606.1\|3594003_3594171_-	hypothetical protein	NA	NA	NA	NA
WP_084085590.1\|3594340_3594508_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_084085592.1\|3594604_3594880_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_084085594.1\|3594935_3595379_+	hypothetical protein	NA	NA	NA	NA
WP_071040215.1\|3595375_3595687_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	1.2e-15	42.2
WP_071040216.1\|3595683_3596268_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	4.8e-21	36.8
WP_071040217.1\|3596264_3598019_-	hypothetical protein	A0A0P0IE11	Acinetobacter_phage	9.4e-28	36.8
WP_071040218.1\|3598121_3598640_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	5.1e-14	37.4
WP_071040219.1\|3598642_3599083_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	1.3e-39	54.8
WP_071040220.1\|3599091_3600909_-	DUF3383 domain-containing protein	A0A0P0I492	Acinetobacter_phage	6.3e-59	43.3
WP_071040221.1\|3600970_3601552_-	hypothetical protein	A9YX29	Burkholderia_phage	2.7e-64	62.5
WP_071040222.1\|3601555_3601927_-	hypothetical protein	A9YX28	Burkholderia_phage	8.9e-29	53.7
WP_157128607.1\|3601933_3602092_-	hypothetical protein	NA	NA	NA	NA
WP_157128608.1\|3602088_3602901_-	hypothetical protein	NA	NA	NA	NA
WP_071040224.1\|3602897_3603257_-	hypothetical protein	NA	NA	NA	NA
WP_071040225.1\|3603398_3603932_-	hypothetical protein	A0A0M4S631	Salmonella_phage	2.3e-38	52.0
WP_071040226.1\|3603928_3604312_-	DUF4054 domain-containing protein	A9YX25	Burkholderia_phage	1.9e-42	67.5
WP_071040227.1\|3604351_3604813_-	hypothetical protein	NA	NA	NA	NA
WP_071040228.1\|3604814_3605903_-	DUF2184 domain-containing protein	A9YX23	Burkholderia_phage	5.3e-146	83.4
WP_071040229.1\|3605971_3606478_-	hypothetical protein	NA	NA	NA	NA
WP_084085598.1\|3606487_3607927_-	DUF2213 domain-containing protein	A9YX03	Burkholderia_phage	1.6e-129	63.8
WP_084085716.1\|3608093_3608441_-	hypothetical protein	A9YX01	Burkholderia_phage	6.2e-32	56.5
WP_071040232.1\|3608619_3609357_-\|head	phage head morphogenesis protein	A9YWZ8	Burkholderia_phage	7.9e-69	56.6
WP_071040233.1\|3609353_3610799_-	DUF1073 domain-containing protein	A9YWZ7	Burkholderia_phage	3.9e-197	70.2
WP_071040234.1\|3610820_3612371_-\|terminase	phage terminase large subunit	H9C0C7	Vibrio_phage	3.2e-112	44.9
WP_071040235.1\|3612321_3612732_-	hypothetical protein	NA	NA	NA	NA
WP_071040236.1\|3612945_3613308_+	hypothetical protein	NA	NA	NA	NA
WP_071040237.1\|3613336_3614716_-	chromosome partitioning protein ParB	A0A1P8VV91	Erythrobacter_phage	2.2e-80	30.5
WP_157128609.1\|3614982_3615678_-	hypothetical protein	NA	NA	NA	NA
WP_071040239.1\|3615714_3616185_-	RusA family crossover junction endodeoxyribonuclease	A9YWY9	Burkholderia_phage	3.9e-45	59.6
WP_084085718.1\|3616181_3617447_-	DUF1376 domain-containing protein	H2BD69	Pseudomonas_phage	9.8e-35	59.8
WP_071040241.1\|3617503_3618469_-	site-specific DNA-methyltransferase	Q8W6P4	Burkholderia_virus	4.6e-117	58.7

DBSCAN-SWA_3

3626829 : 3651822

Burkholderia_phage(31.82%)

integrase,tail

attL 3623291:3623304|attR 3639728:3639741

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3623291:3623304	attL	NA	NA	NA	NA
WP_071038588.1\|3626829_3627624_+	nuclease	J7HXJ4	Pseudomonas_phage	9.1e-55	46.8
WP_071040255.1\|3627653_3628844_+	hypothetical protein	J7HXB6	Pseudomonas_phage	1.9e-64	51.5
WP_071038589.1\|3628958_3629861_+	hypothetical protein	I6XKU1	Burkholderia_virus	1.9e-93	52.2
WP_157128487.1\|3629933_3630824_+	cell division protein FtsK	A0A1Y0SUG1	Pseudomonas_phage	6.9e-11	58.3
WP_071038591.1\|3630831_3632571_+	AAA family ATPase	H2BD46	Pseudomonas_phage	5.4e-76	36.6
WP_071038592.1\|3632570_3632753_+	hypothetical protein	NA	NA	NA	NA
WP_071038593.1\|3632749_3632953_+	AlpA family phage regulatory protein	B7SYF9	Stenotrophomonas_phage	4.3e-09	53.6
WP_071038594.1\|3632952_3633267_+	hypothetical protein	NA	NA	NA	NA
WP_071038595.1\|3633269_3633521_+	hypothetical protein	NA	NA	NA	NA
WP_071038596.1\|3633517_3633790_+	hypothetical protein	B1GS76	Salmonella_phage	6.6e-05	38.6
WP_071038597.1\|3633800_3634175_-	TonB family protein	NA	NA	NA	NA
WP_071038598.1\|3634238_3636110_+	DNA cytosine methyltransferase	Q9ZXI4	Pseudomonas_virus	6.7e-173	62.0
WP_071038599.1\|3636112_3636637_-	hypothetical protein	NA	NA	NA	NA
WP_071038600.1\|3636635_3637280_+	hypothetical protein	H2BDG4	Pseudomonas_virus	3.8e-43	44.4
WP_071038601.1\|3637282_3637555_-	DUF1488 family protein	NA	NA	NA	NA
WP_071038602.1\|3637587_3638112_+	DUF1643 domain-containing protein	A0A142F2K6	Mycobacterium_phage	3.5e-23	42.5
WP_071038603.1\|3638337_3639330_+\|integrase	site-specific integrase	A0A088CD23	Shigella_phage	2.8e-05	22.3
WP_071040198.1\|3639711_3640083_+	hypothetical protein	NA	NA	NA	NA
3639728:3639741	attR	NA	NA	NA	NA
WP_071040577.1\|3640079_3640433_-	DUF1353 domain-containing protein	A0A1L2CVI8	Pectobacterium_phage	5.3e-15	47.8
WP_071040199.1\|3640456_3640921_-	hypothetical protein	NA	NA	NA	NA
WP_071040200.1\|3640972_3641173_-	hypothetical protein	NA	NA	NA	NA
WP_071040201.1\|3641169_3641520_-	HNH endonuclease	NA	NA	NA	NA
WP_071040202.1\|3641581_3643024_-	hypothetical protein	A0A0B4ZZU0	Achromobacter_phage	3.0e-56	35.1
WP_071040203.1\|3643039_3643426_-	hypothetical protein	NA	NA	NA	NA
WP_071040204.1\|3643485_3643983_-	lysozyme	Q3HQU9	Burkholderia_phage	5.5e-26	43.8
WP_071040205.1\|3643979_3644411_-	hypothetical protein	A0A0U5LBV3	unidentified_phage	6.1e-29	55.7
WP_071040206.1\|3644495_3644678_-	hypothetical protein	NA	NA	NA	NA
WP_071040578.1\|3644687_3645395_-\|tail	phage tail protein	A9YX14	Burkholderia_phage	8.4e-60	57.9
WP_071040207.1\|3646123_3646783_-	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	4.0e-72	58.2
WP_071040208.1\|3646784_3647966_-	hypothetical protein	A9YX12	Burkholderia_phage	6.2e-124	62.3
WP_071040209.1\|3647965_3648316_-	hypothetical protein	A9YX11	Burkholderia_phage	5.2e-39	71.8
WP_071040210.1\|3648324_3649050_-	hypothetical protein	A9YX06	Burkholderia_phage	7.7e-77	62.4
WP_071040211.1\|3649062_3649443_+	hypothetical protein	NA	NA	NA	NA
WP_071040212.1\|3649439_3650420_-	hypothetical protein	A9YX04	Burkholderia_phage	3.8e-95	62.4
WP_071040579.1\|3650782_3651244_-	hypothetical protein	NA	NA	NA	NA
WP_071040213.1\|3651252_3651822_-	hypothetical protein	A0A2H4YEU5	Salmonella_virus	1.9e-38	43.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP017748

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017748_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017748_1

2265899-2265992

Orphan

Consensus_repeat	Method
GGCCGGCCGCGATCGGATTGCTTGAGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017748_1

>merge|NZ_CP017748|1|2265899-2265992|CRISPRCasFinder
GGCCGGCCGCGATCGGATTGCTTGAGGTATCGCGTTTTGCTGGGGGTGTTGGCGCTTGCACCCAACGGCCGGCCGCTATCGGATTGCTTGAGGT

>NZ_CP017748|1|1|2265899-2265992|CRISPRCasFinder
GGCCGGCCGCGATCGGATTGCTTGAGGT	ATCGCGTTTTGCTGGGGGTGTTGGCGCTTGCACCCAAC
GGCCGGCCGCTATCGGATTGCTTGAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017748.1\|WP_071037619.1\|2257803_2260167_+\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|274573
NZ_CP017748.1\|WP_071010669.1\|2278508_2278763_+\|cell-division-topological-specificity-factor-MinE	unknown	unknown	gnl\|CDD\|184442
NZ_CP017748.1\|WP_071037620.1\|2262306_2262918_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP017748.1\|WP_084084627.1\|2271308_2271953_-\|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl\|CDD\|376890
NZ_CP017748.1\|WP_071010683.1\|2254104_2254404_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP017748.1\|WP_071010676.1\|2267583_2268279_-\|two-component-system-response-regulator-KdpE	unknown	unknown	gnl\|CDD\|182522
NZ_CP017748.1\|WP_071037618.1\|2257215_2257728_+\|rod-shape-determining-protein-MreD	unknown	unknown	gnl\|CDD\|225444
NZ_CP017748.1\|WP_071010678.1\|2260178_2261321_+\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
NZ_CP017748.1\|WP_071037621.1\|2264260_2265826_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|293752
NZ_CP017748.1\|WP_071010671.1\|2276843_2277617_+\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|234994
NZ_CP017748.1\|WP_071010670.1\|2277673_2278489_+\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
NZ_CP017748.1\|WP_071010673.1\|2276229_2276319_-\|K(+)-transporting-ATPase-subunit-F	unknown	unknown	unknown
NZ_CP017748.1\|WP_071037623.1\|2272008_2274270_-\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_CP017748.1\|WP_071037622.1\|2268315_2271204_-\|DUF4118-domain-containing-protein	unknown	unknown	gnl\|CDD\|225115
NZ_CP017748.1\|WP_083383910.1\|2261333_2262149_-\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|276807
NZ_CP017748.1\|WP_083383909.1\|2263149_2264196_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270297
NZ_CP017748.1\|WP_071010684.1\|2252481_2253987_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP017748.1\|WP_071037625.1\|2276665_2276845_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017748.1\|WP_071037624.1\|2274412_2276230_-\|potassium-transporting-ATPase-subunit-KdpA	unknown	unknown	gnl\|CDD\|235494
NZ_CP017748.1\|WP_071010682.1\|2254981_2256025_+\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|237562

Protein	Function_ID	Function_description	E-value
NZ_CP017748.1\|WP_071037619.1\|2257803_2260167_+\|penicillin-binding-protein-2	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP017748.1\|WP_071010669.1\|2278508_2278763_+\|cell-division-topological-specificity-factor-MinE	gnl\|CDD\|184442	PRK13989, PRK13989, cell division topological specificity factor MinE; Provisional.	3.64088e-49
NZ_CP017748.1\|WP_071037620.1\|2262306_2262918_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	2.04252e-14
NZ_CP017748.1\|WP_084084627.1\|2271308_2271953_-\|potassium-transporting-ATPase-subunit-KdpC	gnl\|CDD\|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	6.08836e-98
NZ_CP017748.1\|WP_071010683.1\|2254104_2254404_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	4.44858e-36
NZ_CP017748.1\|WP_071010676.1\|2267583_2268279_-\|two-component-system-response-regulator-KdpE	gnl\|CDD\|182522	PRK10529, PRK10529, DNA-binding transcriptional activator KdpE; Provisional.	2.46529e-125
NZ_CP017748.1\|WP_071037618.1\|2257215_2257728_+\|rod-shape-determining-protein-MreD	gnl\|CDD\|225444	COG2891, MreD, Cell shape-determining protein [Cell envelope biogenesis, outer membrane].	8.57401e-31
NZ_CP017748.1\|WP_071010678.1\|2260178_2261321_+\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	2.02761e-151
NZ_CP017748.1\|WP_071037621.1\|2264260_2265826_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|293752	cd16028, PMH, Phosphonate monoester hydrolase/phosphodiesterase. Phosphonate monoester hydrolase/phosphodiesterase hydrolyses phosphonate monoesters or phosphate diesters using a posttranslationally formed formylglycine as the catalytic nucleophile. PMH is the member of the alkaline phosphatase superfamily. The structure of PMH is more homologous to arylsulfatase than alkaline phosphatase. Sulfatases also use formylglycine as catalytic nucleophile.	3.7199e-180
NZ_CP017748.1\|WP_071010671.1\|2276843_2277617_+\|septum-site-determining-protein-MinC	gnl\|CDD\|234994	PRK01973, PRK01973, septum site-determining protein MinC.	2.11151e-140
NZ_CP017748.1\|WP_071010670.1\|2277673_2278489_+\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	3.41189e-163
NZ_CP017748.1\|WP_071037623.1\|2272008_2274270_-\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP017748.1\|WP_071037622.1\|2268315_2271204_-\|DUF4118-domain-containing-protein	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	0
NZ_CP017748.1\|WP_083383910.1\|2261333_2262149_-\|sel1-repeat-family-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	8.52493e-34
NZ_CP017748.1\|WP_083383909.1\|2263149_2264196_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270297	cd13579, PBP2_Bug_NagM, Uncharacterized NagM-like protein of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.11978e-133
NZ_CP017748.1\|WP_071010684.1\|2252481_2253987_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP017748.1\|WP_071037624.1\|2274412_2276230_-\|potassium-transporting-ATPase-subunit-KdpA	gnl\|CDD\|235494	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional.	0
NZ_CP017748.1\|WP_071010682.1\|2254981_2256025_+\|rod-shape-determining-protein	gnl\|CDD\|237562	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional.	0

>NZ_CP017748.1|WP_071037621.1|2264260_2265826_+|sulfatase-like-hydrolase/transferase
MTTRNVLFIMCDQLRRDHLGCYGHPALRTRNIDALARRGVRFERAFVTSGVCGPSRMSFYTGRYVSSHGATWNRVPLSVGEVTLGEYLKDSGRALALAGKTHVMPDHAGLKRLHLDGGSELEQLLRSGHFVEVDRHDGHHAEPRSAYADWLRAQGYDSADPWTDYVISAETAQGEIVSGWQMRNAGLPARVAEPHSETAYTVGQAMQYIATRGDDPWVLHLSLVKPHWPYLAPAPYHAAYALDDCLPLKRDPAELEDPHPVLSAYRTQEECANFMRSEVSDTVRPAYQGLIQQIDDRLGELWEQLERLGRWQDTLIVFTADHGDFLGDHWLGEKEQFYDTVQNIPLIVYDPSPQADATRGSASEAMVSAVDVVPTVLDALSLPPADHRIEGRSLLHITQARGAQDGAWRDFVVSELDYAYRGARLALGRHPGECRAWMVRDARWKYVHWQGFRPQLFDLANDPDEFFDLGTDAGHEPVRAAMRQKLLEWFLALKPRVTVSHEEVAAKTNVYKQAGVFFGVW
>NZ_CP017748.1|WP_083383909.1|2263149_2264196_+|ABC-transporter-substrate-binding-protein
MTPATLIPRALRALLPRPAASSVSTALASAATAATVTAIAAFAAPGARAQASDKPIRIVVGYPGGGTSDLTARLIADKLRESLKQTVVVENKPGAGGRLAMDYARTQPADGTTLVLANSAVMTIAPLVYSKLHYDAVRDFTPVAQTANFQLALAVGPGVPAKTLQEYVSWLRASPQNNSFASPALGSLPHFFGLLFGKQLGVTMLHVPFNGSTPEITALVGGQVPAAIDTLGDLAEMHRSGKIRVLASSGTQRSAALPEVPTFGELGHKDIEGLGRNGIFVPAGTPAPVVARLNAAIVKALQAPDLRERFVKMGLDPQSGTPEQFARLLADDRAKWGPIVKASGYTGD
>NZ_CP017748.1|WP_071037620.1|2262306_2262918_-|winged-helix-turn-helix-transcriptional-regulator
MDQARQGQGGGGPADTLRQPATLRQFLNYRLYHLTCAALGASALHLRAAAGVSRREWRMISFLGECPGTRLTELAASAGLDKVLASRAMQALMARGLVRREVGAGDRRAASFALTEAGQAVYRSAFARALDFNTQLASCLDEEEAALLSRCLDKLQAHAAQLLAEAQSLPHAAPAPAGPADAAADPLRLWRGQAPTDFRDSVD
>NZ_CP017748.1|WP_083383910.1|2261333_2262149_-|sel1-repeat-family-protein
MFRRHAVPAAGCPPRHGTSHAWLPWWRLLALLVLILLLVLLAAPSAGAAAGPAVPAAARVVTEQALAAYQAGRFEQALAGFGRAAREGDRLAQYDYAMMLLRGEGTPVRADEAMVWLKKAADNDMTHAQYTWGEMYEHGDLLPRSLEQANVWYERAARGGHVAAQMALATNYFTGRGVARDYGKAFQWYRRAADAGNGDAQYIVASYYERGEPGVVGQDAGQARIWYARSAAHGDPAALAKLRSMIEQDVRERQARQDQLDHRGERAGAGP
>NZ_CP017748.1|WP_071010678.1|2260178_2261321_+|rod-shape-determining-protein-RodA
MDRRRVISLVKSALTGFDKPLALIVFLIFATGIVALYSAAIDMPGRVEDQLRNILLSYAVMLVIAYLPTQTLMRVAVPLYTVGVALLVAVAMFGLIRKGARRWLNVGMVIQPSEIMKIAMPLMLAWYFQKREGVIRWFDFLVALLLLLVPVGLIAKQPDLGTALLVMAAGLYVIYFAGLSWKIILPLLGVVVVAITLLVSFESKICAPGVNWPILHDYQQHRICTLLDPTTDPLGKGFHTIQSIIAIGSGGVTGKGWLKGTQTHLEFIPEKHTDFIFAVYSEEFGLVGNAMLLVLYLMLIFRGLYIAANAPTLFSRLLAGAVTLIFFTYAFVNMGMVSGILPVVGVPLPLMSYGGTALVTLGMGIGILMSISRQKRLIQS
>NZ_CP017748.1|WP_071037619.1|2257803_2260167_+|penicillin-binding-protein-2
MTEIRNVEQEIGRFRIRVAAAAFFAVICFGLLLSRFLWLQWYKHDQYSAKAEDNRISVAPIEPNRGIIMDRNGLVLARNYSAYTLEITPSKLTESLDDTIDALSKVIDIQPRDRRRFKRLLEESRSFESLPIRSQLTDEEVARFSAQRFRFPGVDVRARLFRQYPLGEAASHVIGYLGRISQRDQERIEAMDEANDAEGAKYDPRKDADNYKGTNYIGKIGIEQSYETELHGLTGFEEVEVTAGGRPVRTLSTSPATPGNNLILSLDIRLQQLGEALFGNRRGALVAIEPETGDILAFVSKPTFDPNLFVEGIDTNTWNELNNSPDKPLLNRPLRGTYPPGSTYKPFMALAALATGKRTAAWGFHDPGSFTLGNHTFRDDKPGGHGWVDMYQSIVQSCDTYYYMLARDMGVNGIHDFMKPLGFGQLTGIDIEGEARGILPSTDWKRRAYRRPEQQKWYDGETISLGIGQGYNNFTILQLANATAILANNGVAMKPHLVKAVEDSISRARALTVPKESYRIPLKQADIDVIKRAMVGVTHAGTAARAFAGAAYESAGKTGTAQTFSLGKNEKYNHHALDEHKRDHALYTAFAPVDHPRIAIALIVENAGWGAAEAAPIARKMMDYYLQGKWPAELADIAPPASERAGGQPPVDTPSVFTTGLTASAATATVMANAGASAAAASGPAGTPAVAGASAPATASAGASAAAASASAPAVPERASAGMAAALDPAAIAPADAEETLEQRMQQALGHSKPKPASAPAPTAAAHVAPRPAVKPRAKAAAPEAAR
>NZ_CP017748.1|WP_071037618.1|2257215_2257728_+|rod-shape-determining-protein-MreD
MTNPQYLLRPVNPIFIALSFVLAFLFNLLPWGTTLWIPDMVALVLVFWNIHQPRKVGMGVAFLLGLLMDVHDARLLGEHAMAYTLLAYFAITIHRRVLWFTVYTQALHVLPLLFIAHAVPVLIRLIMGAPLPDWTVLLAPGIEALLWPMATALLLAPQRRPSDVDETRPL
>NZ_CP017748.1|WP_071010682.1|2254981_2256025_+|rod-shape-determining-protein
MFGFLRSYFSNDLAIDLGTANTLIYMRDRGIVLDEPSVVAIRQEGGPNAKKTITAVGKEAKQMLGKVPGNIEAIRPMKDGVIADFTVTEQMLKQFIKMVHDSKLLRPSPRIIICVPCGSTQVERRAIRESALGAGASQVYLIEEPMAAAIGAGLPVSEPSGSMVVDIGGGTTEVGIISLGGMVYKGSVRVGGDKFDEAIVNYIRRNYGMLIGEQTAEAIKKEIGSAFPGSEVREMEVKGRNLSEGIPRAFTVSSNEILEALTDPLNQIVSAVKIALEQTPPELGADIAERGMMLTGGGALLRDLDRLLAEETGLPVLVAEDPLTCVVRGSGMALERMDKLGSIFSYE
>NZ_CP017748.1|WP_071010683.1|2254104_2254404_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MALDLSDVKRIAHLARIEISDEEAGQTLTQLNNFFSLVEQMQAVDTAGLEPLAHPLSAVREMSQRLRDDAVTEADRRDDYQRPAPAVERGLYLVPKVIE
>NZ_CP017748.1|WP_071010684.1|2252481_2253987_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSLSVDTVTSLRQLSDALAARTVSAEELAREYLARIERAGALNAFVDVNPELTLAQARAADERRARGEAGALTGVPIAHKDVFVTRGWRATAGSRMLADYESPFDATVVERLAAAGMVTLGKTNMDEFAMGSSNENSYFGAVRNPWDAARVPGGSSGGSAAAVAAGLAPAATGTDTGGSIRQPASFSGITGIKPTYGRVSRYGMIAFASSLDQGGPMARSAEDCALLLSAMAGFDTRDSTSLAPEQGGVDEDFTRLLGRPWASADAARPLAGLRIGLPREYFGAGLSADVEQAVRAALAEYEKLGATLVEVSLPKTELSIPVYYVIAPAEASSNLSRFDGVRYGHRAAEYRDLLDMYKKTRAEGFGAEVKRRILVGAYVLSHGYYDAYYLQAQKIRRIIADDFQRAFAQCDVIMGPVAPTVAWKLGEKSADPVQMYLADIFTLSTSLAGLPGMSVPCGFGEAGMPVGLQLIGNYFDEARLLQAAHAFQQATDWHLRQPAEA
>NZ_CP017748.1|WP_071010676.1|2267583_2268279_-|two-component-system-response-regulator-KdpE
MPFDFSPTVLVVEDEPHIRRFVRESLEGEGCSVHEAETLKRGLIDAGTRQPDVVILDLGLPDGDGMTLIREMRTWTEVPVLVLSARTGENDKIAALDAGADDYLTKPFGVGELIARVRVLLRRHARLNPQGSAQVSFGEVQVDLANRLVTRGGEAVHLTPIEYRLLAVLIANRGKVLTHRELLRQVWGPSHSESSHYLRVYMGHLRQKLEGDPAQPVHLLTEVGVGYRFVG
>NZ_CP017748.1|WP_071037622.1|2268315_2271204_-|DUF4118-domain-containing-protein
MSDSSLRDPSERPDPDALLQRVQAEGARAARGKLRVYFGASAGVGKTYAMLSAARALHGDGVDVLVGVVETHGRAETEALLAGLERLPPKVVPYRERELTEFDLDGALARRPALVLVDELAHSNAPGSRHPKRWQDIQELQAAGIDVWTTVNVQHLDSLNQAVGGITGIRVWETVPDAVFDDADEVILVDLPADELLRRLQEGKVYLPEQARHAARNFFRKGNLIALRELALRRTADRVDDDVRAYRHAEAIQPVWRTREAVLACIGAGDDAEQVVRSVRRMAGQLDCEWHVVTIATPRLAPLSEAARLRMQEAMRLAEEMGARTETLAGNDMVRAVVGYVRRHNLTKVVLGRAPADWRRGGGTVLERARAVLATSLSPFLGARAWLFGRRSFADALAAACPEIDVIRVAADTTRDDLRGRNPPPGTRPVLADDEAQAEVALAHRKDYLWALVWCGAATALSALTRPWFDLVNIAMLFLAAVVAVALRHGRGPAALASVVSVAAFDFFFVPPRMSFAVSDVQYLLTFAVLLTVGLVIGQLTAGLREQAEVSVQRETDARTLYELARELSAALMTEQIVSIGSRFLHAAFQANCAFFLVSAQGRLLPPLVDPAHRDGSRGGIDPVLAQWVFDHGQPAGTGTHTLPGSTVLYLPLKAPMQVRGVLAVEPQAWRAFTEPGLRRQVDVFATLIAIAIERLHYVEVAQQALVSMESERLRSSLLAAVSHDLRTPLTGLIGMAETLLRGVPALAPPVAETVDAMRGQALRMRTMVVNLLDMARLQSRDVQMQQEWQSLEELVGAALAAMRDALRQHRITVADLSALPLVECDAVLMERVLCNLLENAAKYTPPGSTVAIAGEVAGEEVRLAVEDDGPGVPAGKERLIFEKFTRGERESATTGVGLGLAVCEAIVQAHGGRIWVEGRGDGGSGARFVIALPRGNPPAIEPEAPVAAAQEAREHAPHDKS
>NZ_CP017748.1|WP_084084627.1|2271308_2271953_-|potassium-transporting-ATPase-subunit-KdpC
MHTQVQASPAAAAPDAPDAPEAQRGLLRPLLTVFVALSVVTGLLYPGAVTGIAKALFPSQAAGSLIVKDGKAIGSELIGQPFSDPRYFWGRLSATAPMPYNASASSGSNLGPRNAALTDAAHARIEALRAADPGNAAPVPVDLVTASGSGLDPHISPAAADYQAARVARLRGLPLARVQALVIANTDAPLLAVLGDPVVNVLKLNLALDAEPRR
>NZ_CP017748.1|WP_071037623.1|2272008_2274270_-|potassium-transporting-ATPase-subunit-KdpB
MQQDSMTAQAKAGGAASADTAQATGAPTHGRAGGGHHRPGPRGMFAPELVKPALLESFKKLSPRDQLRNPVMFVVYVGSILTTVLYLRALFAPAAAGGESAAFILAVTVWLWFTLLFANFAEALAEGRSKQQAEALRGLKTTVTAKLLKSGARQGPGAATEPRAATALRRGDVVLVEAGDMIPGDGEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVVRITTNPGESFIDRMITMVEGAKRQKTPNELALTILLVGLTIVLLLATATLQPFSVYSVLVTKAGLPVTITVLVALLVCLIPTTIGGLLSAIGVAGMSRMMEANVIATSGRAVEAAGDVDVLLLDKTGTITHGNRQASRFIPAPGVTPQQLAEAAWLSSLADETPEGRSIVMLARQQSGTALPDGVDPAGHVFVPFTAQTRMSGVDVGAGAVGGAAQRSVRKGAADAVRKYVTERAGKFPDAVLQAVDDVARVGSTPLVVAEAAAGPSGRTDAPDAIVRVLGVVELKDIVKAGIRERFGELRRMGIKTVMITGDNRLTAASIAAEAGVDDFLAEATPEAKLKLIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGSLTTFSVANDVAKYFAIIPAAFATTYPQLNQLNVMGLATPGSAILSAVIFNALIIVVLIPLALKGVVYRPLGAATLLRRNLLIYGLGGIVVPFAGIKVIDMILAACGWA
>NZ_CP017748.1|WP_071037624.1|2274412_2276230_-|potassium-transporting-ATPase-subunit-KdpA
MSTEFLGLLALYLAILLAAAPFLGRYIRRAMEDGSYGLTAWGRPLERLLYRLGGVRPGAEMGWKQYAVAVIAFNLLGVVAVYALQRVQGLLPLNPQGFGAVSPDSAFNTAVSFVTNTNWQGYAGESTMSYLTQMLALTVQNFVSAATGIAVVFALIRGFARQNASTIGNFWVDMTRSTLYVLLPLSVVMALALVSQGVIQNFDAYRDVGLVQAVEYSQPKVDAAGQPVLDAKGQPVTEPARTDKQTLAMGPVASQEAIKMLGTNGGGFFNANSAHPFENPTELSNLIEMLAIFLIPAALCFSFGEMVRDRRQGVAVLAAMTVIFVAMACAAALSEQQANAALAGLPVDHAASLLQAGGNMEGKESRFGIAATALFATITTAASCGAVNAMHDSFTAIGGAVPMLLMQLGEVVFGGVGSGLYGMLVYAVLAVFIAGLMIGRTPEYLGKKIEAYEMKMTAVAILVTPLLVLLGTSVAVMSEAGRAGVFNPGTHGFSEILYALSSASNNNGSAFAGLSANTPFYNVLLAAAMWFGRFWIIVPILAMAGSLAAKKRLPATGGSMPTHGPLFVVLLVGSVLMVGALTYIPALALGPVAEQLQGPVAAAAP
>NZ_CP017748.1|WP_071010673.1|2276229_2276319_-|K(+)-transporting-ATPase-subunit-F
MDWADLLGGALAVVVFVYLLIALFRPEKF
>NZ_CP017748.1|WP_071037625.1|2276665_2276845_-|hypothetical-protein
MEPVTVEMPHSNVVCRTNCNNSAVHAGQCRKRRAAVRWRKAHNGHNVRNVRNVRKAGRT
>NZ_CP017748.1|WP_071010671.1|2276843_2277617_+|septum-site-determining-protein-MinC
MSQKKSPRFELRSGNVDALLLSLETADVPALRDDLLSRFEATPDFFSDDVVALDLRRLPDEAPVALEQVIDTLSTLKARAIGVVARPDQRGWAGAFGLPLLDSQSRRGARAGQPARAAQDADEAAPAAAETAAPAPAPAPEPVRQAVPTLVIDRPLRSGQQIYAQGDVVILDLVSYGAEVIAEGNIHIYAPLRGRALAGVKGNPDARIFCTCLEPELISIAGIYRTAEQTLPAEVLGKSAQVRLAQEKLILEPLRMK
>NZ_CP017748.1|WP_071010670.1|2277673_2278489_+|septum-site-determining-protein-MinD
MAKIIVVTSGKGGVGKTTTSASFAAGLALRGHKTAVIDFDVGLRNLDLIMGCERRVVYDLINVVQNEANLNQALIKDKKCENLFILPASQTRDKDALTRDGVERVINGLTDMGFEYIVCDSPAGIESGALMAMYFADEALVVTNPEVSSVRDSDRILGILASKTKRATEGGEPIKEHLLITRYNAKRVHGGEMLSLTDIQEILRIKLIGVVPESEAVLHASNQGTPAIHLEGTDVADAYADVVDRFLGKDKPMRFTDYQKPGLLSRIFGSK
>NZ_CP017748.1|WP_071010669.1|2278508_2278763_+|cell-division-topological-specificity-factor-MinE
MSILSFLLGEKKKSASVAKERLQIILAHERTGHSAPADYLPALQRELVAVISKYVKISDEDLRVSLERQDNLEVLEVKIEIPQG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP017748_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017748_2

2298980-2299088

Unclear

Consensus_repeat	Method
TCGGTTTGCGGGGCAACGGCCTGTTTCGGCTCTCGTGACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017748_2

>merge|NZ_CP017748|2|2298980-2299088|CRISPRCasFinder
TCGGTTTGCGGGGCAACGGCCTGTTTCGGCTCTCGTGACTTGACGCTTGTCGTGTTGGTTCGGGCGATTTCGGTTTGCGAGGCAACGGCCTGTTTCGGCTCTCGTGACT

>NZ_CP017748|2|2|2298980-2299088|CRISPRCasFinder
TCGGTTTGCGGGGCAACGGCCTGTTTCGGCTCTCGTGACT	TGACGCTTGTCGTGTTGGTTCGGGCGATT
TCGGTTTGCGAGGCAACGGCCTGTTTCGGCTCTCGTGACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017748.1\|WP_071010651.1\|2301897_2302524_+\|glutathione-transferase-GstA	unknown	unknown	gnl\|CDD\|182533
NZ_CP017748.1\|WP_071037635.1\|2306172_2307336_+\|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380618
NZ_CP017748.1\|WP_071037634.1\|2294405_2295134_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP017748.1\|WP_071010656.1\|2295333_2296632_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP017748.1\|WP_083383904.1\|2309331_2310069_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017748.1\|WP_084084633.1\|2307332_2308418_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl\|CDD\|226985
NZ_CP017748.1\|WP_084084631.1\|2303487_2304141_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP017748.1\|WP_071010661.1\|2287587_2288865_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341031
NZ_CP017748.1\|WP_071010650.1\|2302555_2303344_-\|FprA-family-A-type-flavoprotein	unknown	unknown	gnl\|CDD\|223503
NZ_CP017748.1\|WP_071010655.1\|2296746_2297475_+\|Asp/Glu/hydantoin-racemase	unknown	unknown	gnl\|CDD\|226004
NZ_CP017748.1\|WP_071037633.1\|2292050_2293337_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349916
NZ_CP017748.1\|WP_071037632.1\|2290661_2291807_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP017748.1\|WP_071010658.1\|2293560_2294409_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP017748.1\|WP_071037630.1\|2286188_2287499_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|235710
NZ_CP017748.1\|WP_071010652.1\|2300818_2301751_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP017748.1\|WP_071010654.1\|2297529_2298951_+\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|184033
NZ_CP017748.1\|WP_071037631.1\|2288971_2289811_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
NZ_CP017748.1\|WP_071038492.1\|2304299_2305796_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341045
NZ_CP017748.1\|WP_071010648.1\|2308631_2309072_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341391
NZ_CP017748.1\|WP_071010653.1\|2299972_2300710_+\|Asp/Glu/hydantoin-racemase	unknown	unknown	gnl\|CDD\|226611

Protein	Function_ID	Function_description	E-value
NZ_CP017748.1\|WP_071010651.1\|2301897_2302524_+\|glutathione-transferase-GstA	gnl\|CDD\|182533	PRK10542, PRK10542, glutathionine S-transferase; Provisional.	2.7874e-82
NZ_CP017748.1\|WP_071037635.1\|2306172_2307336_+\|BMP-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380618	cd19963, PBP1_BMP-like, periplasmic binding component of a basic membrane lipoprotein (BMP) from Brucella abortus and its close homologs in other bacteria. Periplasmic binding component of a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. These outer membrane proteins include Med, a cell-surface localized protein regulating the competence transcription factor gene comK in Bacillus subtilis, and PnrA, a periplasmic purine nucleoside binding protein of an ATP-binding cassette (ABC) transport system in Treponema pallidum. All contain the type 1 periplasmic sugar-binding protein-like fold.	1.82877e-143
NZ_CP017748.1\|WP_071037634.1\|2294405_2295134_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	9.86176e-33
NZ_CP017748.1\|WP_071010656.1\|2295333_2296632_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.76171e-83
NZ_CP017748.1\|WP_083383904.1\|2309331_2310069_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.59516e-12
NZ_CP017748.1\|WP_084084633.1\|2307332_2308418_+\|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl\|CDD\|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	3.77029e-45
NZ_CP017748.1\|WP_084084631.1\|2303487_2304141_-\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	7.74181e-78
NZ_CP017748.1\|WP_071010661.1\|2287587_2288865_-\|MFS-transporter	gnl\|CDD\|341031	cd17478, MFS_FsR, Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters. Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.96146e-112
NZ_CP017748.1\|WP_071010650.1\|2302555_2303344_-\|FprA-family-A-type-flavoprotein	gnl\|CDD\|223503	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion].	4.15784e-69
NZ_CP017748.1\|WP_071010655.1\|2296746_2297475_+\|Asp/Glu/hydantoin-racemase	gnl\|CDD\|226004	COG3473, COG3473, Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism].	7.07792e-36
NZ_CP017748.1\|WP_071037633.1\|2292050_2293337_-\|amidohydrolase	gnl\|CDD\|349916	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
NZ_CP017748.1\|WP_071037632.1\|2290661_2291807_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.65578e-22
NZ_CP017748.1\|WP_071010658.1\|2293560_2294409_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.30792e-100
NZ_CP017748.1\|WP_071037630.1\|2286188_2287499_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|235710	PRK06133, PRK06133, glutamate carboxypeptidase; Reviewed.	0
NZ_CP017748.1\|WP_071010652.1\|2300818_2301751_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.97093e-27
NZ_CP017748.1\|WP_071010654.1\|2297529_2298951_+\|dihydropyrimidinase	gnl\|CDD\|184033	PRK13404, PRK13404, dihydropyrimidinase; Provisional.	0
NZ_CP017748.1\|WP_071037631.1\|2288971_2289811_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.13745e-38
NZ_CP017748.1\|WP_071038492.1\|2304299_2305796_-\|MFS-transporter	gnl\|CDD\|341045	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.21338e-59
NZ_CP017748.1\|WP_071010648.1\|2308631_2309072_-\|CBS-domain-containing-protein	gnl\|CDD\|341391	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.05262e-57
NZ_CP017748.1\|WP_071010653.1\|2299972_2300710_+\|Asp/Glu/hydantoin-racemase	gnl\|CDD\|226611	COG4126, COG4126, Hydantoin racemase [Amino acid transport and metabolism].	3.03077e-38

>NZ_CP017748.1|WP_071010654.1|2297529_2298951_+|dihydropyrimidinase
MPAHDTLDLVIRNADVVTASDRFQCDIGVRDGRIAVLGHDLPRGAREVDATGLLALPGGVDGHCHLDQPMPDGLRMADDFFTGTRAAVCGGTTTVIPFAAQEKGGSLQAAVDDYHRRAEGRAVADYGFHLIVADPTPKVLREELPALIRRGYTSFKVYMTYDDLKLSDREMLSVLEVAKENGALVMVHAENADCISWLTDKLIGEGRIAPRFHGLARPAAVEREATHRAITFAELVDVPILIVHVSGQEAIEQIRWAQGRGLRILAETCPQYLYLTADDMGLSGDHGYEGAKCVCSPPPRDFENQAAVWRALAGGVFSVFSSDHAPFNYDDPAGKQPGGERPSFDHIPNGVPGIETRLPLLFDGIARGKLTLHQFVALTSYRPARLYGLYPRKGTIAVGADADIVLWDPARKVRIANAELHHAVDYTPYEGIEVTGWPVHCFSRGEMLVEGGRYLEPLAGRGRFLAAGVPVMD
>NZ_CP017748.1|WP_071010655.1|2296746_2297475_+|Asp/Glu/hydantoin-racemase
MSKPIRLGMLTPSSNTALEPITSAMVSGLPGVSAHFSRFTVTEISLRDQALGQFDLDKILGAAQLLADARVDVIGWNGTSSGWLGFERDEALCRQITEATGIPATTSVLALNEILDKTGARRFGLATPYLADVQQRIVANYARSGFDCVAERHLDLHVNYSFAEVEEATIARMVRELAQTRPQAITTFCTNLRAAHLVEALEAETGIPVYDTIATVVWKSLRLAGVDTRALAGWGRLFREVE
>NZ_CP017748.1|WP_071010656.1|2295333_2296632_+|MFS-transporter
MQTTSRAGALAETRSSVRWKIFLMMLFLIAINYIDRASLSVAMPLIAKEFDLSPTMQGLILSAFFWTYALMQVPGGMLADKYKPRIVIATATVFWGAFQALAAVCTSSTALLLTRLGLGAAEAPIYPAGGKLNAIWMTQNERGRGATLLDGGAPLGAALGAILITWLITALGSWRLSFVVAGGGTVLAGMWAWYYIRNHPREHKGVNEIEAKYIEEAQASEHRAEPANLSGRSLDFFKYRSVWCMALGWMCFNTVFYGLLTWMPNYLNKVHGFDIKAMGGASFIIFFSGFVGELIGGWIADKWKAAGGSPNRVMRTLFGIAAVVATVSIFSVAYVKDAVVVVALLSSTLFFLRWCGLFWCIPSILGTRDKVGFLGGVMNLGGNIGGISVPIIVGMIVQYTGSYFLALMFFAAAGVGLLIASTAIDYEKKLPV
>NZ_CP017748.1|WP_071037634.1|2294405_2295134_-|GntR-family-transcriptional-regulator
MSVTQTLASTPRLRTLGMSAEIAARLRTMIEEGELPPGARVDERAFCELFDVSKTPLREALKVLVAEGLVLHRQYIGYRVAPLDLDELRATFETLHGLEALAGELAAARLSEAALAKLERRHQAMLEAHAAGRRTEYFRINQEIHQVIIDGAANPVLAGIYAALMSKVHRARGAANADTLRWQESHEEHEAIMAALREPGRPRLAAVLRHHSENTAREVLSVVERSLSEPARRLANDNRGQR
>NZ_CP017748.1|WP_071010658.1|2293560_2294409_-|fumarylacetoacetate-hydrolase-family-protein
MKLVRVGKPGAERPGLIDAEGRVRDLSGVTGGIGAADLSPAGLARLAQVDVGALPVVEGERFGVPWSGIGKIVAIGLNYADHAAEAGMPLPAEPIVFLKANSSLNGPDDAVMLPFGSVKSDWEVELGVVIGTTARNVARESALQHVAGYCVVNDVSEREFQIERGGTWDKGKGCDTFCPVGPWLVTRDEVADPQALGLWLEVNGERVQQGSTATMVFDVATLVSYVSRFMTLHPGDLICTGTPPGVGMGFKPPRFLKAGDTMRLGIDGLGEQRQGVVAYGEL
>NZ_CP017748.1|WP_071037633.1|2292050_2293337_-|amidohydrolase
MSEHAPELETLLERNTRNTPAPATDTPDGPPLQQALAHHRRYCELGDTLDSRDELQAIRHRIHQNPELAFQELQTAELVASRLEAWGYEVTRGVGGTGVVGTLRSGEGGRSIGIRADMDALPIQELTGLPYASANAGRMHACGHDGHTTVLLGAARQLARTRRFRGTVHLIFQPAEEIGAGGGAERMLADGLFERFPCDAIFGLHNHPGVETGTFMFRTGPLMAACDTVVITIRGKGGHAARPHQSVDPILVAGSLVMALQSVVARNIDPNETAVVTIGTLHAGHAANVIPDSARMELSVRSFSPEVRAALESRIRQIVTAQAESYGASAEIDYQRGYPVLVNSEAETEFARQVAEELVGPDKVVAPCARVAGSEDFAYFLQQRPGCFVRLGNGVGKPLLHNAGYDFNDALLTVGAAYWTRLVERYLE
>NZ_CP017748.1|WP_071037632.1|2290661_2291807_+|IS481-family-transposase
MPWSPRDTMSLRHEFVLLAQQEGCNRRQLCQRYGISPQTGYKWIARYTEQEMAGLVERSRRPATSPTRTAEELERLVVDLRLQHPAWGGRKISRRLQDLGHTPVPAPSTVTSILHRHGLISPEASVKAQPWQRFEHAAPNQLWQMDFKGGFRTHDGQMCSPLTVLDDHSRFAVTLAACTQTHTAVVQEHLAQAFRHFGLPWRINADNGAPWGSPSQPGQLTGLGVWLIRLGVRLTHSRPAHPQTNGKDERFHRTLKAEVINARGFASSLQAQHAFDAWRDIYNLQRPHEALGLATPVTRYQPSPRSYPEVLPEIEYGPDDLVVKIKWDGQLRFRGQTFKVSNALRDFPVALRPQPNHDGRFDLYFVDHCFGYIDLNDHQAA
>NZ_CP017748.1|WP_071037631.1|2288971_2289811_+|helix-turn-helix-transcriptional-regulator
MTRPTRRLPPAPAPDPAALARADTYAETPAYVRYDRGPMPVTAMAADYLPGHVTKPHQHPHAQLIHAVHGVMVVSTGEGQWIVPPTRGMWMPGGTVHWIRMVGRVQMRTAYVRPDAAAGLPQSCTVLGISALLRELILAAIDIPATYAPDSRDGRLMRLLLDEVMLVPTLPLHLPRPADAGLRQICEAITATPDTALTLAQWGGRLGVDPKTIQRRFARETGMTFGQWRQQARLLAALERLAAGVKVVDVALDLGYESPSAFSTMFRRQFGVPPSGFFR
>NZ_CP017748.1|WP_071010661.1|2287587_2288865_-|MFS-transporter
MSTPAQSAPPGAAQPAQSAQSAHRAADAAHRAADAERTGFRVLSAISFAHFLNDMIQSLILAIYPMLKGGFNLSFAQIGLLTLTYQITASLLQPVVGLYTDRHPKPFSLAVGMGFTLCGLLLLSVAPTYGVLLVAAALVGTGSSIFHPESSRVARMASGGQHGLAQSIFQVGGNGGSATGPLLAAWIVHQQSNLAWFSLAALLAIAVLWQIGGWYARQLEHGARKRKAGAGTLAPLPTATVVRAMVVLMLLIFSKYFYMASLNTYYTFYLMEKFGLARESAQLYLFVFLFAVAAGTILGGPIGDRIGRKRVIWGSILGVAPFTLMLPHANLFWTGVLSFIIGFILASAFSAILVFAQELIPGKVGMVSGLFFGFAFGMGGIGAAVLGRLADAQGIESVYQLCAFLPLLGLLAVFLPDLRHRQGKA
>NZ_CP017748.1|WP_071037630.1|2286188_2287499_+|M20/M25/M40-family-metallo-hydrolase
MRPSSSPRLIHALRPAALAACAALCASLAAGAYAAPVEPAWQLSQQEKPALLDTLKDLVSIESGSKDLEGLDRVATLIRDRLAALGGDARLVEPGEVYRMEDTPQKVGKMVLAQFHGKGTRKIMLIAHMDTVYLRGMLAQQPFRIDGERAYGLGIADDKNGVAVILHTLAVLKKMNFQDYGTLTVLVNGDEEISSPGARAMLSRLGAEQDAVFSCEATRVNGDRLSLATSGIGAVQLKVTGKASHAGGAPEQGRNALYELSHQVLQMRDLSDPASGLKVNWTIASAGTNRNVIPAIASAQADVRVLRTADYDALERKLQERIKNQLIPDTKVEVRFERRRPPLEATPASRALAAHAQTVYAEIGEKLAVFDTAEGGGTDAAFAAAATKAPVIERFGLRGFGAHSNDAEYVDLNSVAPRLYLLTRMIMDVSQDKTGR
>NZ_CP017748.1|WP_071010653.1|2299972_2300710_+|Asp/Glu/hydantoin-racemase
MQLLIINPNTSQSVTDLIEAEARRSLSQGTRITMATAPFGVAYIETRFEALVGGYATACAAAEHAGRFDGLVVAAFGDPGLAGLKELFDVPVVGMTEAALASACLLGQRFSIIAISHRIEAWYRECVAANGLTSRLASVRSLQEPLRDIGSVQQDHAARLEQLSLQAVREDGADVIIVAGAPLAGLARELKERIPVPVVDGVSSAVRHCESLVALAPRGAREGSFARPPRKPNVGLPPALARLLD
>NZ_CP017748.1|WP_071010652.1|2300818_2301751_-|LysR-family-transcriptional-regulator
MAANSQYQLTPADLDAVLALVRGGTLAEAGRRLGVDASTVFRVLQRVEKGLGRRLFERSRAGYLATELAQQFAQHAERIEAELEAARGHAAGSAGTLSGLVRISTTDTVLHALLLPALSDFGRAHPGLRFELAATNELASLSRRDADIAVRATRQPPPHLIGRRLGPLRVAVFAARGLAEQVAPLPAQQDGAAAAPGWDAAALSALPWIGPDEALPEHPSVRWRRKHLPRVVPQYGVNSIGSLAEAVAAGLGAGVISLAIAARSPHLVALTPALEPCETDLWLLTHPESRHLRRIAAVVTHLAARIAVPE
>NZ_CP017748.1|WP_071010651.1|2301897_2302524_+|glutathione-transferase-GstA
MKLYYTPGACSLATHIALREAGLPFTLARVDLATHKLAEPENGSDDFYAISPRGYVPLLQLDNGSRHTEGVALLEYVADRVPERALLPAPGTPERMEAVGWLALVATELHKVFSPWLWHKETAASTREDCKAKLALRFAELDAHLARREYLMGDTFTVADAYCFTVVNWANMLGLPLGAYPSLQAYLARVAARPKVREALVAEGLAKD
>NZ_CP017748.1|WP_071010650.1|2302555_2303344_-|FprA-family-A-type-flavoprotein
MAITLYEADGHSCLMFADLVEEEHGEVVQTNQFLVVDHGHGALIDPGGHMTYGELYLAISRYFPPKQLDYVLASHADPDIVASVGRWLTASDSKVLISRVWARFLPHFCQAGKTAGRIVTLPDPGAAIPLGHCHLLAVPAHFLHSEGNFQFYDPVSKILFSGDLGAAMTSAAEAGTVVTDFDAHVAAMLPFHQRYMSGNRACRLWAGMARGLDIEWIVPQHGPPLRGKAMVARFIDWVGSLACGLDLLTQEHYRVPRVPGAH
>NZ_CP017748.1|WP_084084631.1|2303487_2304141_-|glutathione-peroxidase
MHAFPLALPRARRAAPAASLPVLLGATLLALAAAALPRAAAAADQPAAAPAGARPGTCPAALNFRFPRLQDEAPQDLCQYAGKVVLVVNTASYCGFTPQYEGLEALYSKYRERGLVVLGFPSNDFSQEPGSAKEIAEFCYNTYGVKFPMLGKSHVRGSEVNPMYALLAKETGTAPKWNFYKYLIDRNGRVVASFNSLTKPDEAPFVARIEQLLDASR
>NZ_CP017748.1|WP_071038492.1|2304299_2305796_-|MFS-transporter
MRVIGGIVLCILLAALDQTVVIPAVPAIAADLNGFGHLSWIVTAYLIVSTVTTPLYGKLSDHFGRRRLLLAAIALFMLASVACAMAQSLGQLILFRALQGVGGGGLMSLAQAAIADVVAPRQRGRYQGYLATVWAVASIAGPLVGGWVSDHMSWRWLFWINVPLGLLAMLMCHRGLARLALPRAGGRLRVDWLGAMLLTVAIVTFLLAMSWGGDLFDWLSPEMGGLALATLAALAALAWQERRAADPMLPPRLFANRAYVLGAAASALAALDIFLCIFALPLQFQLVRGADASLSGLLVVPFLLATVAGNFIVAWLAPRLGRLRGLLVAGLAAAVVGLAVLAVVPATIPLPVVLLAMVVAGVGLGVAMVGTLMNVQNALERRDMGAGTGALLVLRSLGSAFGGALAGTLLTLEFRRAQAAAGLPAELDLGALRHGSEALAQLAPAVRDALGAGVASGFHLIFAAGAAAALLALLIARRGPDVELRSSVTEHAATLAME
>NZ_CP017748.1|WP_071037635.1|2306172_2307336_+|BMP-family-ABC-transporter-substrate-binding-protein
MTLTRRRLLQWSAALAAAPLAACGRKEDVPAAAPASAAEAASAPAAAAAVTGKPLEIGFVYLGPVGDAGWTYAHERGRQALIEAFGDRIRTTYVENVPESGAEAERVFLDLASQGKQLIFGTSFGYMEPMLKIARQFPEVRFEHATGYKTASNLGVYAGRMHEPAFLAGVIAGQMTRSNVLGFVGAVPIPEVIRNINAFTLGARAVNPKAVVKVVWVNKWFDPGREREAAGALAAQHADVLIQNTDSPAVLQYAEEKGLRAFGWDSDMSRFGPRAHLASAVFNWGVYYKQTVGDLLAGRWQPATTWWGIKQEMNDLVSLDDKLPAAVRASLASHRQAIVAQGNAAIFRGPLQDNTGKTVLAAGASADDAALLAMNYYVAGVEGRIPA
>NZ_CP017748.1|WP_084084633.1|2307332_2308418_+|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MSAHPQDRPQDHPQAAPQHAAVAAGQDATGPEHDQWHPVLALEHADGDGPYPVRLLERDLVLWRNADGWHAWDDRCPHRGAAFTLGRVQDGLLRCGYHGWRFESSGRCTRYPAHPGLVPAPRACAVTHAVREAYGLLWVRLARAGDGAAPPPALPPFPESGAAGCRQVIAGPYDVATSAPRLVENFLDMAHFGYVHDGYLGDPEHTEVPPYEVEASGDPRAPDALRTIGCRAWQPRSHASAEGGAMVEYEYRVVAPYTAVLTKVPDLGDDHRAAIALFICPREPEASRVWFVMSLVSEDDDASLRAFQDTIFLQDQPIVESQRPRRLPLATGVEVPQPADRMASAYRRYLAAHGVRFGTLP
>NZ_CP017748.1|WP_071010648.1|2308631_2309072_-|CBS-domain-containing-protein
MKTARQVLEAKSSQAIFSIQPGATVYSALQLMAEKGIGALLVMEYGKIVGILSERDYARKVILMQRTSRDTLVREIMTTAVIYVRGDQSTDECMALMTEHRLRHLPVMQGEDLIGMLSIGDLVKDIISEQRFIIEQLEHYITGTHS
>NZ_CP017748.1|WP_083383904.1|2309331_2310069_-|TetR/AcrR-family-transcriptional-regulator
MTRLYRRAGRAGFGNAAATDGAAARPARPLKRPSQQRARFTVAAIYEAFVRIWQARGWAGVTTRAVALEAGCSVGTLYEYFPNKEALLSGFVRHAIERLLARIEDEAAHAPAADWRERVGRLVRLCCSAEDGAWTAYDRDMMALEARIAEPKHHQRFFEELCAAWLRVLAACPDLPRQPDAAVVASLAQAVWGARRYRLLLAPVPPASDWALQMERFCVLALEQACGIGAGPPPGPHPGPHPRPQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP017748_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017748_3

2627308-2627442

Orphan

Consensus_repeat	Method
CGATGTTTCACGTGAAACACAGGCCGG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP017748_3

>merge|NZ_CP017748|3|2627308-2627442|PILER-CR
CGTTGTTCCACGTGAAACACTGGCCGGGCATTCCATGCCCGGCTTTTTTGTGTCCGGATTCGATGTTTCACGTGGAACACAGTCGAGGTGCCGACCGCTTCGCATTGGCGATGTTTCACGTGAAACACACGCCGG

>NZ_CP017748|3|1|2627308-2627442|PILER-CR
CGTTGTTCCACGTGAAACACTGGCCGG	GCATTCCATGCCCGGCTTTTTTGTGTCCGGATT
CGATGTTTCACGTGGAACACAGTCGAG	GTGCCGACCGCTTCGCATTGGCGATG
TTTCACGTGAAACACACGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017748.1\|WP_071010406.1\|2629486_2630197_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP017748.1\|WP_071010396.1\|2634821_2635364_+\|F0F1-ATP-synthase-subunit-delta	unknown	unknown	gnl\|CDD\|235593
NZ_CP017748.1\|WP_071037742.1\|2625413_2626418_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
NZ_CP017748.1\|WP_071010405.1\|2630276_2631050_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
NZ_CP017748.1\|WP_071010420.1\|2618826_2619981_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380556
NZ_CP017748.1\|WP_071037744.1\|2627521_2629486_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP017748.1\|WP_071037743.1\|2626420_2627296_+\|N-formylglutamate-amidohydrolase	unknown	unknown	gnl\|CDD\|377442
NZ_CP017748.1\|WP_084084902.1\|2618157_2618532_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017748.1\|WP_071010400.1\|2633054_2633921_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|235617
NZ_CP017748.1\|WP_071010403.1\|2631115_2632018_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP017748.1\|WP_071010401.1\|2632342_2632816_+\|ATP-synthase-subunit-I	unknown	unknown	gnl\|CDD\|225849
NZ_CP017748.1\|WP_071037741.1\|2623336_2624080_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP017748.1\|WP_071010414.1\|2624344_2625289_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP017748.1\|WP_071010419.1\|2620437_2621490_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223633
NZ_CP017748.1\|WP_071010422.1\|2615673_2616558_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223633
NZ_CP017748.1\|WP_071010398.1\|2634348_2634819_+\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NZ_CP017748.1\|WP_071010392.1\|2635414_2636956_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NZ_CP017748.1\|WP_013958389.1\|2633982_2634249_+\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|180739
NZ_CP017748.1\|WP_083383864.1\|2616584_2617604_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
NZ_CP017748.1\|WP_071037740.1\|2621493_2623323_+\|branched-chain-amino-acid-ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|223488

Protein	Function_ID	Function_description	E-value
NZ_CP017748.1\|WP_071010406.1\|2629486_2630197_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	5.83465e-78
NZ_CP017748.1\|WP_071010396.1\|2634821_2635364_+\|F0F1-ATP-synthase-subunit-delta	gnl\|CDD\|235593	PRK05758, PRK05758, F0F1 ATP synthase subunit delta; Validated.	1.83605e-70
NZ_CP017748.1\|WP_071037742.1\|2625413_2626418_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.44685e-145
NZ_CP017748.1\|WP_071010405.1\|2630276_2631050_+\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.55386e-86
NZ_CP017748.1\|WP_071010420.1\|2618826_2619981_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380556	cd06333, PBP1_ABC_RPA1789-like, type 1 periplasmic binding-protein component (CouP) of an ABC system (CouPSTU; RPA1789, RPA1791-1793), involved in active transport of lignin-derived aromatic substrates, and its close homologs. This group includes RPA1789 (CouP) from Rhodopseudomonas palustris and its close homologs in other bacteria. RPA1789 (CouP) is the periplasmic binding-protein component of an ABC system (CouPSTU; RPA1789, RPA1791-1793) that is involved in the active transport of lignin-derived aromatic substrates. Members of this group has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP).	5.63938e-157
NZ_CP017748.1\|WP_071037744.1\|2627521_2629486_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP017748.1\|WP_071037743.1\|2626420_2627296_+\|N-formylglutamate-amidohydrolase	gnl\|CDD\|377442	pfam05013, FGase, N-formylglutamate amidohydrolase. Formylglutamate amidohydrolase (FGase) catalyzes the terminal reaction in the five-step pathway for histidine utilisation in Pseudomonas putida. By this action, N-formyl-L-glutamate (FG) is hydrolyzed to produce L-glutamate plus formate.	4.79987e-60
NZ_CP017748.1\|WP_071010392.1\|2635414_2636956_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_CP017748.1\|WP_071010400.1\|2633054_2633921_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	2.19572e-69
NZ_CP017748.1\|WP_071010403.1\|2631115_2632018_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	2.88819e-76
NZ_CP017748.1\|WP_071010401.1\|2632342_2632816_+\|ATP-synthase-subunit-I	gnl\|CDD\|225849	COG3312, AtpI, F0F1-type ATP synthase, subunit I [Energy production and conversion].	3.0756e-10
NZ_CP017748.1\|WP_071037741.1\|2623336_2624080_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	1.30692e-116
NZ_CP017748.1\|WP_071010414.1\|2624344_2625289_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	2.12237e-69
NZ_CP017748.1\|WP_071010419.1\|2620437_2621490_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|223633	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism].	3.67053e-47
NZ_CP017748.1\|WP_071010422.1\|2615673_2616558_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|223633	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism].	2.44687e-72
NZ_CP017748.1\|WP_071010398.1\|2634348_2634819_+\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	1.16986e-54
NZ_CP017748.1\|WP_013958389.1\|2633982_2634249_+\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|180739	PRK06876, PRK06876, F0F1 ATP synthase subunit C; Validated.	1.8377e-23
NZ_CP017748.1\|WP_083383864.1\|2616584_2617604_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	1.20685e-68
NZ_CP017748.1\|WP_071037740.1\|2621493_2623323_+\|branched-chain-amino-acid-ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|223488	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.83864e-113

>NZ_CP017748.1|WP_071037743.1|2626420_2627296_+|N-formylglutamate-amidohydrolase
MTASFDKPAAPAPFLLWQAEEGEGVPLVCDSPHSGTFYPADFGSVLPPQRLRGGEDTHVEALWEHVPRVGGTLLAATFPRVYIDPNRTLEDLDPELLEGAWPEPLAPGEKTRLGYGLVWSRMDSSTPIYARKLGVDEVRQRIDRYYRPYHAALGEAVEAAHRRFGAVWHLNLHSMPNNAYERLKIQSPHPLADFVLGDRDGSTCEPGIVDLVETVLRGMGYTVARNDPYKGVQLIARIGRPAERRNSLQIEIRRPLYMDEVSRERNGGFAKLQRDLGLLTEEIAHYLRRQL
>NZ_CP017748.1|WP_071037742.1|2625413_2626418_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNRACAPRRRFVLSCFAVAAVAAAALPAASALAQDKYPSRPIKLVVPFAAGGSTDLIARLVSEYAGRELGQSVVVENKGGAGGSLGMEQVARSAPDGYTIGMATVSTHGSNPAVFPKLSYDPIKDFAPITNVVAIPSVFAVHPSVPAKTMQEFIALAKANPGKYSFASPGAGSLGHVNIENFMMLAKIDLLHVPYKGAGLALNDAVAGQVSAITDNLSSTLPHVKSGRLRALAVLGAARSPLLPNVPTYAELGFKDMGDGGWFGIVAPAGTPPAIVARLNAAIHKGMQNPDFKRRVEESGGTLIPNSPEQFRAQMQQAMARYARVAKAANIKLD
>NZ_CP017748.1|WP_071010414.1|2624344_2625289_-|LysR-family-transcriptional-regulator
MRIRSPSMSELHAFAAAAKLGSFTRAAEQLCVTQGAISRAIARLEDHFGQPLLQRNAHRIVLTASGRQLLEAVAGPLAAIESASTALLAGDRRHALTLSAVPTLASVWLVPRLPDFHRRHPDIVLDFVPYRRKEDFSGPAPDAAILAGTAGQWPQWQADYVIGSEMVPICHPSRAALRSAEGRWRHPAELQDEPLLHHTTAPANWQNWLRAAGVPDAAPRLSTGFDQVSILVQAVKADMGLAVLQRCLVRDEIASGSVAVPFDLPIRLQRGYYLCAPRGRSHPALEHFRAWLLEIAGRDPDVLDAGQFMHVTDE
>NZ_CP017748.1|WP_071037741.1|2623336_2624080_+|ABC-transporter-ATP-binding-protein
MSLILEVKDLHVRYGKVEAVHGANLKVEAGRIVTVIGPNGAGKSTMLNAIMGALPSTGSATGEVRYLGHDMAGIPVEGRVSRGMCLVPEKRELFATMSVEDNLLLGAYRRKRAGEKNFLDQKEVVYELFPRLKERAKQEAGTLSGGERQMLAVGRALMAKPSLLMLDEPSLGLAPLIVKEIFHIVSDLRRTGVATLLIEQNARAALQVADYAYVIETGDMSMEGPAAELAANPRVIETYLGLAKKAA
>NZ_CP017748.1|WP_071037740.1|2621493_2623323_+|branched-chain-amino-acid-ABC-transporter-ATP-binding-protein/permease
MTMLTDKQQAVAGSRGGLTRNRVLTLLFALCLLLLPALPTPEYWITLGNYIGLYSIVAIGLVLLTGVGGMTSFGQAAFVGLGAYGTAYLSTQVGLSPWLGLLAGLLVTMACAYVIGLITMRMSGHYLPLATIAWGLSLFFLFGNLDFLGKYDGLNGIPVLSLFGIELGSGRAMFYLIWAVVLLAVLAVQNLLNSRPGRAIRALKGGGVMAEAMGVNTAWMKVVIFVVAAMLACISGFLYAHLQRAVNPTPFGLNYGIEYLFMAVVGGVGHVWGAVLGAGVLTILKDVLQGVLPKLLGANGNFEIIVFGVLLVLLLQHAREGIWPFLKKLFPAAPPVVAPEHAPALAVRPKPAAGELLLDVRAARKEFGGLVAVNDVSFQVRAGEIIGLIGPNGAGKSTTFNLVTGVLPVTRGEVRYRGEVISSLPSREIVKRGIGRTFQHVHLLPTMTVLENVAIGAHLRGDFRAQGGVSAAVLRLNRAEEEKLLFEAARQLERVGLADCMYMEAGSLALGQQRILEIARALCCDPALLLLDEPAAGLRYKEKQALAALLKKLKGEGMSVLLVEHDMDFVMNLTDRLVVMEFGTRIAEGVPEAVQKDPAVLEAYLGGVE
>NZ_CP017748.1|WP_071010419.1|2620437_2621490_+|branched-chain-amino-acid-ABC-transporter-permease
MDLSIAAILAQDGITSGAIYALLALALVLVFSVTRVIFIPQGEFVAYGALTLAAIQAGQAPQTSWLVLVMGVLTFLYECATVLRSAELRRTAGRRLAVLAGKYLLFPLAVHLLAQRLGATPMPMAAQIALTLLIVIPIGPMLYRLAYQPLAEASTLVLLIVSVGVHFAMVGLGLVMFGAEGSRTTAFSDANWNLGGLAVSGQSLWVVGMSAVLIAALYFYFERTIPGKALRATAVNRLGARLVGIGTTQAGRLSFTLAAAMGALCGILIAPLTTVYYESGFLIGLKGFVGAIVGGLASYPVAAAGALLVGLLESYSSFWASAFKEVIVFTLIIPVLLWRSLNSKPVEEEE
>NZ_CP017748.1|WP_071010420.1|2618826_2619981_+|ABC-transporter-substrate-binding-protein
MKFKRASLLAMAAAALFAGAASAQVKIGVTVSATGPAASLGIPEKNTISLLPKEIAGKKVEYIVLDDASDTTTAVKNTRKLISEDKVDAVIGSTVTPNALAMVDIVAENDTPMITLAASARIIEPMDAKRKWAFKTPQNDSHMATAIAEHMTNHNVKTVAFIGFADAYGDSWADEFGKVAGMRKIKVVANERFARTDTSVTGQVLKMMAANPDAVLIAGSGTPAALPAKTLKERGWKGKIYQTHGVANADFLRVCGKDCEGTFLPAGPLLVAEQLPDSNAVKKPAMTYKTAYEKAFGGQVSTFGGHAWDAGLLLQRAIPIALKSGAQPGTVEFRKALRDAMEQTKELAISHGIMNMSPTDHLGLDQRARVMVQIVNGAWKLQAN
>NZ_CP017748.1|WP_084084902.1|2618157_2618532_+|hypothetical-protein
MPVPAQRGRQLLLASQLSRPEQGGCLLCEAGERLVGCLSFNVVPCLAQGGLAALALEWWHDGADAAPALAASCAMLADWCRAHGIRQLLLAPALVDAAAPPQGFAVDASGLWCRMLVPSYKRLG
>NZ_CP017748.1|WP_083383864.1|2616584_2617604_+|branched-chain-amino-acid-ABC-transporter-permease
MAAAVAGADRAREGRGVQKKIWYGLLLAGLIVAPLAGAYPVFVLKVLCFALFACAFNLLIGYTGLLSFGHAAFFGGAAYTAGYAMKAWGVTPEVGLVLGTVVGAAIGYVVGALAIRRQGIYFSMITLALAQMLYFFCLQAPFTGGEDGLQGVPRGKLFGVLPLDSDVTLYYVALVIFVAAFALIVRTVHSPFGQILKAIKENEPRAVSLGYDTDRFKLQAFVLSAALSGLAGAIKALVLGFATLTDVHWSMSGSVILMTLVGGLGTLSGPLAGAFVVVALENKLGDIGTFLASMTGIGWFNSLGESVTTVTGVIFVICVLTFRRGIMGELLARFGRRTG
>NZ_CP017748.1|WP_071010422.1|2615673_2616558_+|branched-chain-amino-acid-ABC-transporter-permease
MDIFGIPLPAMLSQLLLGLVNGAFYAMLSLGLAVIFGLLNVINFAHGALFMLGAVLTWMGMEYAGLSYWWMLVLAPLAVALIGVVIERTMLRWIYKLDHIYGLLLTLGITLVVEGVFRSIFGVSGLPYSPPDALQGATDLGFMILPNYRAWVVVASIAVCLATWYVIEKTKLGAYLRAGTENPKMVEAFGINVPLMVTLTYGFGVALAAFAGVLAAPVIQVSPLMGQHLIIVVFAVVVIGGMGSIMGSIITGLGLGVIEGLTKVFYPEASSTVVFFIMVIVLLLRPAGLFGREK
>NZ_CP017748.1|WP_071037744.1|2627521_2629486_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MLYPKEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDAMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQADRVLYRKAIRTRLENQPNLMLFQQAVDDLMVEGDRVVGAMTQVGIAFRARAVVLTAGTFLDGKIHVGLDNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRTIDFTVMEEQPGDLDPVPVFSFLGRPEQHPQQLPCWITHTNGLTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFDVQLELVHSIRGLESAHILRPGYAIEYDYFDPRALKASLESKAIEGLFFAGQINGTTGYEEAAAQGLLAGINAGCFARERDPWTPRRDQAYLGVLVDDLITRGVTEPYRMFTSRAEFRLSLREDNADMRLTEAGRELGVVDDVRWDAFNRKRDAVSRETERLKSTWVNPALLPPEDAVPLLGKAIEREYSLADLLRRPGVSYEALMALQGGRHAAEAPLDAEPMIADQIREQIEIGIKYHGYIARQAAEVDKLGANEATRLPPDFDYTEVRGLGFEVSQKLNQHRPETLGQASRISGVTPAAISLLLVHLKKKGMGRKAGQPAQAGTGQPPQEAA
>NZ_CP017748.1|WP_071010406.1|2629486_2630197_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MTAPKSFAGADDTALRRRLEAGLSAIGLALAPGQVDTLLAYLALLRKWNGVYNLTAIRHPDEMLSHHLLDSLAAVPALAEAARAAAVTPPARGRVLDVGSGGGMPGLPLAISCPDLSVLMVDIVQKKTAFLTQCRAQLGLSNAGAHWGPVEKLDDAQGFAVITSRAFAELVDFVTLSGHLLAPGGKLVAMKGVYPHAELERMEAAGLMADWQLDAVPRLAVPELDAERHLVVLSRR
>NZ_CP017748.1|WP_071010405.1|2630276_2631050_+|ParA-family-protein
MAKVFVIANQKGGVGKTTTTVNLAAGLAAQDQRVLLVDLDPQGNASMGSGIDKQSLEHSVYQVLVGLATIPQARQRSESGKYDVLPANRELAGAEVELVELEQRERRLKQAIAEVDADYDFVLIDCPPSLSLLTLNGLCAAHGVIVPMQCEYFALEGLSDLVNTIKQVHANLNRDLKVIGLLRVMFDPRVTLQQQVSAQLEAHFGDKVFKTVIPRNVRLAEAPSYGMPGVAFDASSKGAKAYLDFGAEMIARVKQLG
>NZ_CP017748.1|WP_071010403.1|2631115_2632018_+|ParB/RepB/Spo0J-family-partition-protein
MSTVKKKGLGRGLEALLGGPAEIVETARQEGAPQVLRLDQLQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRRVAEPDRYEIIAGERRFRASKLAGLDKVPVLVKEVADEVAAAMALIENIQREDLNPLEEAQGIMRLIREFRFTHEQAAEAVGRSRSAVSNLLRLLNLAQPVQTMLMAGDLDMGHARALLAVDGATQITLANQVVNKRLSVRETEKLVAAALKPVELTSLKHRAGAGGRDVARLEEELSDALGLPVQIKLNTRGKGQLTVRFTSNDALDEVLVRLRGAVGDQRVA
>NZ_CP017748.1|WP_071010401.1|2632342_2632816_+|ATP-synthase-subunit-I
MHREDKARRADWTDEAETEDDIVEPLSHADAVNLFGERALRASRMTPGKVVLVQVVVTLLSAAAWGWFGRPGAASAWSAWFGGMVCFVPSGFFALRLWMMRARPSISGLVVGEAIKVFGTAALFVLVVVLYHDLRWVPMLVTFLLALKSYWVALAIR
>NZ_CP017748.1|WP_071010400.1|2633054_2633921_+|F0F1-ATP-synthase-subunit-A
MSEAIPGAEHALTPSGYIAEHLQNLNSIGGKQASVVDFSVLNYDTIFWSVLCGLIAVGFLMIAARRVTAGVPGRFQAFVEMIVEMVDDQAKGIIHGDRSWIAPLALMVFCWITIMNAVDLIPVDWVTGLNSFLGIFHLHLPHHRAVATADLNGTLGMSFSVLILMIYYSFKIKGAGGFMHELFSAPFGAKWYLAPFNLVLNIIEFLAKAVSLGMRLFGNMYAGELVFLLIALLGSMWTFGADLSALGFVGHVLAGAVWAIFHILIVLLQAFIFMMLTLVYIGQAHDHH
>NZ_CP017748.1|WP_013958389.1|2633982_2634249_+|F0F1-ATP-synthase-subunit-C
MQAFLANIQGLTAIGIGIIIGLGAIGACLGIALMGGKYIEACARQPELMNPLQTKMFLLAGLIDAAFLIGVGVAMLFAFANPLLAVIK
>NZ_CP017748.1|WP_071010398.1|2634348_2634819_+|F0F1-ATP-synthase-subunit-B
MNLNATFLAQMVVFFILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKRVDQAMSEARTEGAQRVADAEKRAQLVADEIKQNAQAEAARIIAQAKTDAEQQVTKAREQLRDQVSVLAVKGAEQILKREVNAQVHADLLNQLKAEL
>NZ_CP017748.1|WP_071010396.1|2634821_2635364_+|F0F1-ATP-synthase-subunit-delta
MAETATIARPYAEALFRAASESSAGNLGAWSELMSEMGQVAANPDMQALATDPNVPGEKLAETFLSVLKSPVNDEAKRFVQLLVENNRLIVLPEIAEQFHVLKNAREGSADVEITSAFPMEGAQLNDLVAALERKFGRKLQPKVAVDPSLIGGVCVKVGDEVLDTSVRARLASMQAALTA
>NZ_CP017748.1|WP_071010392.1|2635414_2636956_+|F0F1-ATP-synthase-subunit-alpha
MQLNPSEISELIKSRISGLGADAEVRNTGTVISVTDGICRVHGLSGVMQGEMLEFPGNTFGLALNLERDSVGAVVLGEYEHISEGDTVKCTGRILEVPVGKELLGRVVNTLGQPIDGKGPINAKETDVIEKVAPGVIARQSVSQPVQTGLKSIDAMVPIGRGQRELIIGDRQTGKTAVAVDSIINQKGKGVFCVYVAIGQKASTIANVVRKLEEHGAMEYTIVVAAAASDSAAMQYLAAYAGCTMGEYFRDRGEDALIVYDDLTKQAWAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEKFTNGAVKGKTGSLTALPVIETQAGDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVVKKLSGGIRTDLAQYRELAAFAQFASDLDDATRKQLERGRRVTELLKQPQYQPLQVWQLAASLYAANNGFLDNVEVKDLLPFEKGLHDHLKSKYADLVNRIEDTKDLSKEDEAALRAAIEDFKKSAAF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

168408 : 175451

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071036850.1\|168408_169038_+	DUF2829 domain-containing protein	A0A2I7R7I1	Vibrio_phage	6.0e-17	53.7
WP_084084375.1\|169041_169719_+	transglycosylase SLT domain-containing protein	A0A0S4L2W4	Pseudomonas_phage	1.7e-38	46.9
WP_071036852.1\|169712_170039_+	hypothetical protein	NA	NA	NA	NA
WP_071036853.1\|170234_170591_+	hypothetical protein	NA	NA	NA	NA
WP_157128329.1\|170622_171276_+	hypothetical protein	A0A2K8HN72	Pseudomonas_phage	4.1e-29	48.2
WP_071036855.1\|171235_172021_+	hypothetical protein	F8TUP1	EBPR_podovirus	6.6e-66	53.5
WP_084084377.1\|172024_172567_+	HNH endonuclease	NA	NA	NA	NA
WP_071036856.1\|172587_173340_+	hypothetical protein	A0A076G6J2	Vibrio_phage	1.3e-63	51.3
WP_071036857.1\|173372_175451_+	hypothetical protein	M4MB09	Vibrio_phage	3.7e-124	39.4

DBSCAN-SWA_2

444527 : 478656

Erwinia_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071036964.1\|444527_445904_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_071036965.1\|447059_447593_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_071036966.1\|447647_448475_-	TonB family protein	NA	NA	NA	NA
WP_157128348.1\|448844_449336_+	hypothetical protein	NA	NA	NA	NA
WP_084084414.1\|449482_450073_+	hypothetical protein	NA	NA	NA	NA
WP_157128350.1\|450484_451006_-	hypothetical protein	NA	NA	NA	NA
WP_084084416.1\|451002_451656_-	DUF2778 domain-containing protein	A0A1S6L3A5	Erwinia_phage	4.4e-15	42.5
WP_084084418.1\|452208_457680_-	hypothetical protein	NA	NA	NA	NA
WP_157128352.1\|457679_460058_-	hypothetical protein	NA	NA	NA	NA
WP_071036968.1\|460699_461314_+	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	3.2e-23	46.7
WP_071036969.1\|461315_461795_+	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_071036970.1\|461813_463004_+	type II secretion system F family protein	NA	NA	NA	NA
WP_084084420.1\|463000_463618_+	hypothetical protein	NA	NA	NA	NA
WP_157128356.1\|463606_464418_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_157128358.1\|465542_466904_+	hypothetical protein	NA	NA	NA	NA
WP_071036973.1\|466900_467254_+	hypothetical protein	NA	NA	NA	NA
WP_004633552.1\|467306_467678_+\|transposase	transposase	NA	NA	NA	NA
WP_004633551.1\|467719_468010_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_009238807.1\|468072_469602_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.4e-115	46.1
WP_071036974.1\|469623_469914_+	hypothetical protein	NA	NA	NA	NA
WP_085960481.1\|470499_471685_+\|transposase	IS3-like element ISRme13 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.2e-56	39.7
WP_157128359.1\|471831_474147_+	general secretion pathway protein GspD	NA	NA	NA	NA
WP_071036976.1\|474150_474651_+	type II secretion system protein	NA	NA	NA	NA
WP_071036977.1\|474659_475061_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_084084428.1\|475656_476793_+	c-type cytochrome	NA	NA	NA	NA
WP_011517431.1\|477447_478656_+\|transposase	IS4-like element ISBvi1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1281551 : 1290500

Tupanvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071011660.1\|1281551_1282475_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	1.1e-38	33.2
WP_071011658.1\|1282610_1283717_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_071011657.1\|1283841_1284744_-	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	2.5e-53	40.5
WP_071011655.1\|1284829_1286134_-	pyrimidine utilization transport protein G	Q9KX94	Enterobacteria_phage	2.8e-146	64.9
WP_071011654.1\|1286528_1286873_-	hypothetical protein	NA	NA	NA	NA
WP_071011652.1\|1287037_1288030_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	1.2e-27	33.1
WP_071011651.1\|1288095_1289043_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.3e-12	26.4
WP_071011649.1\|1289114_1290500_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	4.9e-72	36.2

DBSCAN-SWA_4

3499606 : 3560496

Bacillus_phage(16.67%)

transposase,tRNA,integrase

attL 3492242:3492258|attR 3565133:3565149

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3492242:3492258	attL	NA	NA	NA	NA
WP_071014835.1\|3499606_3500383_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_071037997.1\|3500694_3501336_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_071037998.1\|3501457_3501763_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_071037999.1\|3501800_3502691_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_071038000.1\|3502969_3503884_+	WYL domain-containing transcriptional regulator	NA	NA	NA	NA
WP_084084737.1\|3503888_3504362_+	BREX-3 system P-loop-containing protein BrxF	NA	NA	NA	NA
WP_071038552.1\|3504409_3508138_+	ATPase	NA	NA	NA	NA
WP_071038001.1\|3508149_3509328_+	AAA family ATPase	NA	NA	NA	NA
WP_071038553.1\|3509321_3509951_+	DUF4276 family protein	NA	NA	NA	NA
WP_071038002.1\|3510073_3511963_+	sensor histidine kinase	NA	NA	NA	NA
WP_071038003.1\|3511959_3513324_+	hypothetical protein	Q858S9	Enterobacteria_phage	5.3e-18	27.9
WP_016495558.1\|3513696_3515229_+\|transposase	IS21-like element ISAav1 family transposase	NA	NA	NA	NA
WP_016495557.1\|3515218_3516061_+	ATPase AAA	A0A059NT77	Lactococcus_phage	2.0e-31	34.7
WP_003049965.1\|3516796_3519712_+\|transposase	Tn3-like element IS1071 family transposase	NA	NA	NA	NA
WP_077260283.1\|3519876_3520095_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	8.9e-21	70.1
WP_071038006.1\|3520443_3523098_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	5.6e-157	34.2
WP_071038007.1\|3523142_3524456_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	3.0e-79	40.2
WP_084084741.1\|3524587_3525361_-	zinc permease	NA	NA	NA	NA
WP_084084743.1\|3525574_3526894_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_071038009.1\|3526912_3527743_-	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_071038010.1\|3527798_3529130_-	DUF3422 domain-containing protein	NA	NA	NA	NA
WP_046462314.1\|3529302_3529701_-	VOC family protein	NA	NA	NA	NA
WP_043387381.1\|3529752_3530862_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.9e-35	31.4
WP_043387383.1\|3531145_3532051_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_071038011.1\|3532212_3534189_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_034390491.1\|3534735_3535962_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.1e-50	48.7
WP_157128428.1\|3535954_3536266_-	hypothetical protein	NA	NA	NA	NA
WP_071038012.1\|3536516_3537161_-	resolvase	NA	NA	NA	NA
WP_157128429.1\|3537459_3537819_-	hypothetical protein	NA	NA	NA	NA
WP_071038013.1\|3537802_3538108_-	hypothetical protein	NA	NA	NA	NA
WP_005798840.1\|3538309_3538744_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_005798838.1\|3538815_3539166_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_004178136.1\|3539179_3539455_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_000522996.1\|3539482_3539908_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_071038014.1\|3539946_3541632_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	9.3e-41	28.8
WP_000995361.1\|3541649_3542015_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_005413392.1\|3542011_3542248_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_010981356.1\|3542263_3542584_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_005797799.1\|3543180_3544143_+	chromate resistance protein	NA	NA	NA	NA
WP_071038016.1\|3544199_3545396_+	chromate transporter	NA	NA	NA	NA
WP_005797796.1\|3545457_3546366_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.0e-09	35.5
WP_005797792.1\|3546370_3546829_+	chromate resistance protein	NA	NA	NA	NA
WP_005797790.1\|3546844_3547234_+	hypothetical protein	NA	NA	NA	NA
WP_005797786.1\|3547306_3548209_+	DUF1259 domain-containing protein	NA	NA	NA	NA
WP_013722012.1\|3548268_3548628_+	hypothetical protein	NA	NA	NA	NA
WP_071038017.1\|3548674_3550501_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.0e-24	24.7
WP_059441849.1\|3550497_3552300_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.9e-33	26.3
WP_005797778.1\|3552315_3553386_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_005800234.1\|3553905_3555429_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_005800232.1\|3555418_3556228_+	ATPase AAA	A0A2L1IVB6	Escherichia_phage	1.3e-29	36.6
WP_009288528.1\|3556652_3557870_-	TniQ family protein	NA	NA	NA	NA
WP_011494285.1\|3557866_3558775_-	AAA family ATPase	NA	NA	NA	NA
WP_013741669.1\|3558777_3560496_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
3565133:3565149	attR	NA	NA	NA	NA

DBSCAN-SWA_5

4429002 : 4478717

Pseudomonas_phage(25.81%)

plate,coat,integrase,tail,terminase

attL 4426075:4426091|attR 4437830:4437846

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4426075:4426091	attL	NA	NA	NA	NA
WP_071038305.1\|4429002_4430241_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	2.0e-85	45.6
WP_071038306.1\|4430233_4430944_+	hypothetical protein	NA	NA	NA	NA
WP_071038307.1\|4430996_4431569_-	DUF1643 domain-containing protein	A0A142F2K6	Mycobacterium_phage	7.1e-25	41.6
WP_071038309.1\|4431765_4432413_-	hypothetical protein	A0A0U1SZL2	Pseudomonas_phage	1.5e-39	45.4
WP_071038310.1\|4432417_4433638_-	phosphoadenosine phosphosulfate reductase family protein	R9TRT5	Rhizobium_phage	2.3e-174	70.8
WP_071038311.1\|4434613_4435456_-	hypothetical protein	NA	NA	NA	NA
WP_071038312.1\|4435452_4435725_-	hypothetical protein	B1GS76	Salmonella_phage	5.0e-05	41.4
WP_071038595.1\|4435721_4435973_-	hypothetical protein	NA	NA	NA	NA
WP_071038314.1\|4435975_4436290_-	hypothetical protein	NA	NA	NA	NA
WP_071038315.1\|4436289_4436493_-	AlpA family transcriptional regulator	B7SYF9	Stenotrophomonas_phage	5.6e-09	51.8
WP_071038316.1\|4436489_4436672_-	hypothetical protein	NA	NA	NA	NA
WP_071038317.1\|4436671_4438411_-	AAA family ATPase	H2BD46	Pseudomonas_phage	5.4e-76	38.3
4437830:4437846	attR	NA	NA	NA	NA
WP_071038318.1\|4438407_4439088_-	hypothetical protein	J7I0T4	Pseudomonas_phage	1.3e-09	40.2
WP_071038319.1\|4439099_4440179_-	hypothetical protein	H2BD49	Pseudomonas_phage	5.2e-77	55.7
WP_157128446.1\|4440175_4440667_-	hypothetical protein	I2GUC6	Acinetobacter_phage	6.3e-30	46.2
WP_071038321.1\|4440674_4441469_-	nuclease	J7HXJ4	Pseudomonas_phage	9.7e-57	47.6
WP_071038322.1\|4441744_4442038_-	hypothetical protein	NA	NA	NA	NA
WP_071038323.1\|4442034_4442370_-	hypothetical protein	NA	NA	NA	NA
WP_071038324.1\|4442373_4442685_-	hypothetical protein	NA	NA	NA	NA
WP_071038325.1\|4442697_4443009_-	hypothetical protein	NA	NA	NA	NA
WP_071038326.1\|4443257_4443758_-	hypothetical protein	NA	NA	NA	NA
WP_084084816.1\|4443802_4444687_-	hypothetical protein	A0A0P0ZE37	Stx2-converting_phage	1.6e-31	34.1
WP_071038328.1\|4444667_4444931_+	hypothetical protein	NA	NA	NA	NA
WP_071038329.1\|4444930_4445167_+	hypothetical protein	NA	NA	NA	NA
WP_071038330.1\|4445480_4445792_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_071038331.1\|4445788_4446106_+	DUF4406 domain-containing protein	L7TKQ2	Pseudomonas_virus	1.1e-24	55.8
WP_157128447.1\|4446557_4447322_-	hypothetical protein	NA	NA	NA	NA
WP_071038333.1\|4447359_4447806_+	hypothetical protein	Q6JIG5	Burkholderia_virus	6.2e-53	71.1
WP_071038334.1\|4447802_4448801_+	YdaU family protein	A0A0P0I481	Acinetobacter_phage	6.3e-21	44.4
WP_157128448.1\|4448797_4448998_+	hypothetical protein	NA	NA	NA	NA
WP_071038335.1\|4448994_4449462_+	RusA family crossover junction endodeoxyribonuclease	A9YWY9	Burkholderia_phage	1.1e-44	60.1
WP_157128449.1\|4449498_4450194_+	hypothetical protein	NA	NA	NA	NA
WP_157128450.1\|4450302_4450851_-	hypothetical protein	NA	NA	NA	NA
WP_071038337.1\|4451110_4452490_+	chromosome partitioning protein ParB	A0A1P8VV91	Erythrobacter_phage	1.2e-81	31.1
WP_071038338.1\|4452565_4452916_+	hypothetical protein	NA	NA	NA	NA
WP_071038339.1\|4452908_4454192_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	5.2e-161	66.9
WP_071038340.1\|4454206_4455610_+	DUF4055 domain-containing protein	A0A0H5AWC7	Pseudomonas_phage	4.0e-98	46.4
WP_071038341.1\|4455751_4456528_+	hypothetical protein	A0A0S2SY92	Pseudomonas_phage	2.2e-53	54.3
WP_084084933.1\|4456740_4457880_+\|coat	P22 coat - protein 5 family protein	W6EBZ8	Rhizobium_phage	2.5e-98	52.7
WP_071038343.1\|4457932_4458154_+	hypothetical protein	NA	NA	NA	NA
WP_071038344.1\|4458153_4458549_+	hypothetical protein	NA	NA	NA	NA
WP_071038345.1\|4458552_4459203_+	hypothetical protein	NA	NA	NA	NA
WP_071038346.1\|4459203_4460034_+	hypothetical protein	NA	NA	NA	NA
WP_071038347.1\|4460247_4461771_+	hypothetical protein	B3GAJ6	uncultured_virus	5.4e-80	40.3
WP_071038348.1\|4461825_4462257_+	hypothetical protein	NA	NA	NA	NA
WP_071038349.1\|4462259_4462625_+	hypothetical protein	NA	NA	NA	NA
WP_071038350.1\|4462794_4463268_+	hypothetical protein	NA	NA	NA	NA
WP_071038351.1\|4463516_4465454_+	hypothetical protein	NA	NA	NA	NA
WP_071038352.1\|4465463_4466432_+	hypothetical protein	NA	NA	NA	NA
WP_071038353.1\|4466439_4467561_+	hypothetical protein	NA	NA	NA	NA
WP_084084935.1\|4467581_4468232_+\|plate	phage baseplate assembly protein V	B3GAJ7	uncultured_virus	3.0e-11	34.2
WP_084084820.1\|4468228_4468609_+\|tail	phage tail protein	NA	NA	NA	NA
WP_071038355.1\|4468610_4469750_+\|plate	baseplate protein	B3GAJ9	uncultured_virus	1.6e-60	46.1
WP_157128484.1\|4470536_4470776_+	hypothetical protein	I3UM19	Rhodobacter_phage	6.8e-06	42.3
WP_071038357.1\|4470772_4470982_+	hypothetical protein	NA	NA	NA	NA
WP_071038358.1\|4470985_4472146_+	hypothetical protein	A0A0E3HGL3	Synechococcus_phage	1.5e-18	28.8
WP_071036648.1\|4472142_4472475_+	hypothetical protein	NA	NA	NA	NA
WP_157128451.1\|4472523_4473363_-	hypothetical protein	NA	NA	NA	NA
WP_157128309.1\|4473492_4475229_+\|tail	phage tail protein	A9YX14	Burkholderia_phage	1.2e-56	40.8
WP_071036650.1\|4475282_4475465_+	hypothetical protein	NA	NA	NA	NA
WP_071036652.1\|4475550_4475997_+	hypothetical protein	A0A0U5LBV3	unidentified_phage	8.2e-29	55.7
WP_071036654.1\|4475986_4476469_+	glycoside hydrolase family 104 protein	Q6J1Q5	Burkholderia_virus	4.0e-45	62.8
WP_071036656.1\|4476465_4476801_+	ammonia monooxygenase	A0A291AUV3	Sinorhizobium_phage	5.2e-28	49.6
WP_071036661.1\|4476872_4477259_+	hypothetical protein	NA	NA	NA	NA
WP_071036662.1\|4477274_4478717_+	hypothetical protein	A0A0B4ZZU0	Achromobacter_phage	2.4e-61	35.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP017750

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017750_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017750_1

282407-282714

TypeV-U4

Consensus_repeat	Method
AGGCCGGTATGCACCGGTGCATAT	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_CP017750_1

>merge|NZ_CP017750|1|282407-282714|CRISPRCasFinder
GCGCCAATATGCACCGGTGCATATTGGCTTCTCCGTGCTTCCTGACCAGGCCGGTATGCACCGGTGCATATTGGTTTTTGGAGCCAGCGGCTTCCCGCCGATCAACCAGCAATGGCAGCAAGGCCGATATGCACCGGTGCATATCGGCCTTGGCCGCCGACGCTGCGCACCGCCTATGCACCGGTGCATACTTCAACCCCAGGTTATCTCGCCATCCTGTCGGAGCCTATAGCCTCCGTGGCTTTATGCACCGGTGCATGGCAGACGAGCCCGGGAATCAGCTCGACGCCATATGCACCGGTGCATAC

>NZ_CP017750|1|1|282407-282714|CRISPRCasFinder
GCGCCAATATGCACCGGTGCATAT	TGGCTTCTCCGTGCTTCCTGACC
AGGCCGGTATGCACCGGTGCATAT	TGGTTTTTGGAGCCAGCGGCTTCCCGCCGATCAACCAGCAATGGCAGCA
AGGCCGATATGCACCGGTGCATAT	CGGCCTTGGCCGCCGACGCTGCG
CACCGCCTATGCACCGGTGCATAC	TTCAACCCCAGGTTATCTCGCCATCCTGTCGGAGCCTATAGCCTCC
GTGGCTTTATGCACCGGTGCATGG	CAGACGAGCCCGGGAATCAGCTC
GACGCCATATGCACCGGTGCATAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017750.1\|WP_084085797.1\|281116_282238_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|272946
NZ_CP017750.1\|WP_071040745.1\|292261_292909_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017750.1\|WP_071040737.1\|275854_276478_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|180777
NZ_CP017750.1\|WP_071040743.1\|285554_286769_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017750.1\|WP_157128702.1\|283120_284395_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225891
NZ_CP017750.1\|WP_071040734.1\|271617_274047_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496
NZ_CP017750.1\|WP_071040864.1\|288908_291020_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|234698
NZ_CP017750.1\|WP_157128699.1\|274196_274721_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017750.1\|WP_071040741.1\|284591_284873_+\|DUF1778-domain-containing-protein	unknown	unknown	gnl\|CDD\|370057
NZ_CP017750.1\|WP_071040738.1\|276634_277663_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226990
NZ_CP017750.1\|WP_157128701.1\|280029_281124_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|224113
NZ_CP017750.1\|WP_157128700.1\|277891_278671_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017750.1\|WP_084085803.1\|291955_292207_+\|H-NS-histone-family-protein	unknown	unknown	gnl\|CDD\|225468
NZ_CP017750.1\|WP_071040739.1\|278761_279676_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271175
NZ_CP017750.1\|WP_071040733.1\|271001_271241_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017750.1\|WP_084085799.1\|286949_288455_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284995
NZ_CP017750.1\|WP_157128703.1\|291073_291676_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017750.1\|WP_071040736.1\|274720_275827_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017750.1\|WP_084085801.1\|288649_288883_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017750.1\|WP_071040742.1\|284869_285376_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP017750.1\|WP_084085797.1\|281116_282238_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|272946	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein. This model represents the most well-conserved core of a set of chromosomal and plasmid partition proteins related to ParB, including Spo0J, RepB, and SopB. Spo0J has been shown to bind a specific DNA sequence that, when introduced into a plasmid, can serve as partition site. Study of RepB, which has nicking-closing activity, suggests that it forms a transient protein-DNA covalent intermediate during the strand transfer reaction.	1.17547e-12
NZ_CP017750.1\|WP_071040737.1\|275854_276478_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|180777	PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional.	2.0287e-80
NZ_CP017750.1\|WP_157128702.1\|283120_284395_+\|hypothetical-protein	gnl\|CDD\|225891	COG3355, COG3355, Predicted transcriptional regulator [Transcription].	0.000415102
NZ_CP017750.1\|WP_071040734.1\|271617_274047_+\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	4.08233e-11
NZ_CP017750.1\|WP_071040741.1\|284591_284873_+\|DUF1778-domain-containing-protein	gnl\|CDD\|370057	pfam08681, DUF1778, Protein of unknown function (DUF1778). This is a family of uncharacterized proteins. The structure of one of the hypothetical proteins in this family has been solved and it forms a helix structure which may form interactions with DNA.	2.30902e-21
NZ_CP017750.1\|WP_071040738.1\|276634_277663_+\|hypothetical-protein	gnl\|CDD\|226990	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown].	1.84014e-16
NZ_CP017750.1\|WP_157128701.1\|280029_281124_+\|AAA-family-ATPase	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.37006e-26
NZ_CP017750.1\|WP_071040739.1\|278761_279676_+\|site-specific-integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	5.8843e-11
NZ_CP017750.1\|WP_071040864.1\|288908_291020_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	1.26655e-22
NZ_CP017750.1\|WP_084085799.1\|286949_288455_+\|hypothetical-protein	gnl\|CDD\|284995	pfam07693, KAP_NTPase, KAP family P-loop domain. The KAP (after Kidins220/ARMS and PifA) family of predicted NTPases are sporadically distributed across a wide phylogenetic range in bacteria and in animals. Many of the prokaryotic KAP NTPases are encoded in plasmids and tend to undergo disruption to form pseudogenes. A unique feature of all eukaryotic and certain bacterial KAP NTPases is the presence of two or four transmembrane helices inserted into the P-loop NTPase domain. These transmembrane helices anchor KAP NTPases in the membrane such that the P-loop domain is located on the intracellular side.	8.88509e-28
NZ_CP017750.1\|WP_084085803.1\|291955_292207_+\|H-NS-histone-family-protein	gnl\|CDD\|225468	COG2916, Hns, DNA-binding protein H-NS [General function prediction only].	5.04698e-10
NZ_CP017750.1\|WP_071040742.1\|284869_285376_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.74066e-07

>NZ_CP017750.1|WP_084085797.1|281116_282238_+|ParB/RepB/Spo0J-family-partition-protein
MAKTSTETDFIHRLRNRADGAGGADTPAGRMVLHTPPKGTGKSLEELLAEHPDAPTGLPSPASSATHATSQVPDSDQAREFGFRVPLSKLKQHPWNARIARSPERIREIASSMAGSRQYHPLAVTKDPAEPGTYFIFDGDTRFKAAELLNWPDIWVLEGHVDASSPLDVYVQSFRHTEDTDPIPQIDMGIRWAQLISEKLATQEQLAERLGYHQATISRMLSFSRFPERIQAFMRENKERFPYSVAGVLVSAIDSRTEEELLALCQRIVTEEISRRAIESLLKEKKQTARAPRKAAVISKPIRLGESQVGMLRTYETGAIEFKVQEAASIDEKVLAELVDLLGAAVELVSTGETNLRQALINKLTAPEKAPKK
>NZ_CP017750.1|WP_157128701.1|280029_281124_+|AAA-family-ATPase
MRFDLATKPFKVQAVAQLLGTTVDSVRRMVDEAGIEVSRQESGPKTRLFSVENIFDLAHHRSSKRGGKARSKKQVIATVYAPKGGVGKTTLASNLACRFALRGVKVLIIDLDFQSNLTLSFGYDSELTQEEALEAGVSPDKTVEAHFGNLIPGWPYGRRTLGEVVKKPFGDAGPHIVPSDLTLDRLDTMLTYEVLEGKNADLTIAKLLKDGQAGKDQHFDTRDYDIILFDAAPAKNRMTRGALLASDYVISPVSMEKFSTKALSYLSSVLTEMQDQFNRSPELVIVGNFFDPNRVRVMGQLMTITQTYQDAWLDRTIRRSEDFPKALNGETDVPLVLFKPSSASANELRDVADALLVRMGVIDG
>NZ_CP017750.1|WP_071040739.1|278761_279676_+|site-specific-integrase
MTDRLWLTDPAKAFAAWQEIGATGVDGRPFSSRSIIQHQAMFEAVLEHLAHCGQTLATFHTAELEAFLAARGLDRSSSTAKRYAKLFERLGRHLVTSGVRAENPGKPLSDSLAWPLDDPAIAFLPPAFDTALQQWVQPSPNDDRSTSRDKAAIALFLGAGLTVAEARQLPLAGFERALPGALARVRTESAGGRLSRIAIVEGFAQPPVLAWIAVRASHGYTGELLLAFRRTGKRAAVISLWRAVHDALVAIGYRGVESGPQALRNTYGRRLLLRGLDPKAAAERLGLSSARTTYRLRQTISASS
>NZ_CP017750.1|WP_157128700.1|277891_278671_+|hypothetical-protein
MNRYALCIAAVLLLAPSLGFTKEVTEVANWCSEGKKYLLFDRPRNPGDACKVIDSRCIRLNNYWCQKHTPGDPWEGAKDSDTNEPIQDPGKHAAFDSPVWSARAIAIDLRSKYTGVSGGKRKSEKDRLTSAFQIIGAYSPWCDTVGSVTETKDKTVGRSCSDGNRPGPNFAGRLCKAPTANETDPQNCIPGCNCPPTAARTLIQGLPGKTITDDLELFDKRGKPLPNLAIVIRNLAWQEHKRRVSDELVRRGIALLNEK
>NZ_CP017750.1|WP_071040738.1|276634_277663_+|hypothetical-protein
MKVRFDELDWKDVLSRAGLAEFLSNKQGPCPLCQGKTRFRFDNKNDAGTWYCNSCGAGNGYTLLRSYLGGDRQVFEFLKDTGLCRAAPQASPLPSHREARDAAEKAARDRQKKRDKLNATWKGSIALTEASPVWQYLRRRVPSLQLEWLSGDLLEHPSLEYWEVSSSKWVSRGHWPAMIAVARRRSGKPVTLHRTYLSKDGFKAPLAEVKKQMASPEKLLGAAILLNRPTTQSRKLIVCEGIETGLALVAATENRFEVWALLNAGNLAVADIPRDRFDEVIVCADRDPLDPRHGWRPGEHYAELLKARLLSEGFVCKLHVPTGERNDFCDLLQRARHLRLVA
>NZ_CP017750.1|WP_071040737.1|275854_276478_+|single-stranded-DNA-binding-protein
MASVNKVILVGNLGADPETRYMPSGDAVTNIRLATTDRYRDKASGDMKELTEWHRVSFFGKLAEIAGQYLKKGSQVYIEGRIRTRKWQDQSGQDKYSTEIVADQMQMLGSRQGGNSEGDNGFSEDGNSNRQAPAQPNGAARNRGGASGSGQQASAAQPAPAGNAGYGSPRSGGYAGGGAPRSGGFEDMDDDIPFALPRALDGIPFRR
>NZ_CP017750.1|WP_071040736.1|274720_275827_+|hypothetical-protein
MLPIHRKFFRLLLWIAKPVFRLVWGLLKLAPRGLLWLVMFLILVPYTLIAKPEKAERKLAWLQEQLGIPQEPEDDEAASGEAEHDDDAEAPQATPPVPAVRDVNELKRLAAGGTPDAALRGIEMRGATCIETVAIDGRVIVLYQYRDHYRRTIKSVGPAGKVERAEMGTLTRETFAQAGIPFCMSNAVWLTRLLYEAQREIAAVVAPVAFETSQAAVSAVDQVAVSASGSAKRRRRNASSSGHGQTATPALASATVTALHQPDDTKPLKVEVGRIVDMGMREYKPEGRRKYRSYTITLERAGGARRSFTGEHLGELASTRRLCVGDHVRIAMLGRMPVQVPDPDQPGEWIETHRNEFDVRHISSKAVA
>NZ_CP017750.1|WP_157128699.1|274196_274721_+|hypothetical-protein
MKEQLLDLFGEQVMPATARIPKVEGKESDRMSIDGLSSANLEVFCSRVAVSLWSGLQDDVVAFQAAKKKHEAAPAADGSDFFGLPNLWAEKIALFDALCWAFGLFEHSAIAPFDAVCDELDMDVARVRRSFARSLHQELRELFRVIRMALGESFAATVAEKLDDYVNLGNWRNQ
>NZ_CP017750.1|WP_071040734.1|271617_274047_+|hypothetical-protein
MKPHLLRLENFCGIRSGLGKSEIQLDLRNIDSSATLVALAGPNGTGKTTLMDNLHPFRVMPFHASSPSPGGFSYWDHIYGPEAAKHLEWEHHGRTYRSDLVFRQSGKRQKQDAYLTVEQDGQWIPVRLPDGTVSDGKTNTYDACIEHLLGKPEVFFTAHYASQSRVPLSGMSASDTKSLLSSMLGHDAIRSEGAKASAVAKLLGAELSRVQAELRQAQADAEQAAIIREQAKDADRALQDAKLRAEHAQESATTAATALAALSAQRDAQASLRTQRQQLEEQIRAARADLATQQTEAARQTDARRREIASTQAAAQQQLTGARSEAQRLQTDQSRREALIAQEAAIEQAYAQLSVIQATVTDLTAERSRLTPCVPALIQARGALGSAREAHQKTIADGTAKRQAVGTMQATAKLIEEVPCAGQALQGRCPLLAHANQAKANLPREIVVLQDLRKAFETERAQMVGLTEQLNALEGRDQQLRDLDRRLAEANGHLLSLTKAASQREALVAAKQEAPQAAENLRALVALQEQLVTQIGETAARMTELDADLAIRQQALAVTHVEQARKLEEMLLALPVPVDDTAHRQAQATLSAAQQALSAARHAADTAQGQIQVLQVRAAAVEQMARSREILAAQAAALSDEQAYWQLLAKCLSNDGLIALSIDDAGPAISELCNHLLEECYGGRFAVQFATQRTTQGGTQRETFEIHVQDADRGETKLLGLMSGGERVWINDCLVRALAVHMAHGTGGGVQTLFSDEADGPLDPDRKRQYMAMKRAVLSAGGYEREFFISQTPELNAMADAIIDIPSLV
>NZ_CP017750.1|WP_071040733.1|271001_271241_+|hypothetical-protein
MKQLRKLLRGIRSALAAPNSKQLEAAGRLLHTLAAASMIGSFTLAFGSGISSLADLGRCGGLLAWGVVLFLLGLLGFQG
>NZ_CP017750.1|WP_157128702.1|283120_284395_+|hypothetical-protein
MTSIMSVGNAHPQQSEDHYELYEQDTRGDFLRSSSRLVISSPVVSNKSKLSVSEQNFVGTETASPVFLPRKIANAIVNVYEALDAYDLSQTQRRVLACLIRFGVKVDSPASFIFLKKATIASKLKISEATIYRCLATLESFGLIEREEQRRTPETLKVIGRIRLTGIAIDALGLNPPAAASKQDMAQAAHIEEGAAGQELASVRDNNLPPQSSSKKQPAEPAAFRRIEGKAVPSDLAWLVEDRSLSLPGLFGLMKRARNASTRLSDVVQTAYHAIAELRGRDLFAYLAALIKKPLDFTFVANAARAERDRRQEEEGSKAKQHARITALATSLRGRVIADPNGGSWSVDEASVTLRRGTGRDAATNAWPLALALPQLEFLAQLAAGQPVSAPGTPTPATRSLRAAIADHLDRARAIVGARRAPAM
>NZ_CP017750.1|WP_071040741.1|284591_284873_+|DUF1778-domain-containing-protein
MPTANTTARLEARISFDLHAMLKRAAELQGRTMTDFVVAAVQEAAQRAIEQSDVVRLSLADQECFANALLSPPQPTPALERAFARRDKLLRAE
>NZ_CP017750.1|WP_071040742.1|284869_285376_+|GNAT-family-N-acetyltransferase
MSAAPFRLVPLDPAHDRAGFDSGSDPLNRYLREQVSQDVRRRVAACFVALADGPRIAGYYTLASASLLLAELPPSISKKLPRYPTVPAVRMGRLAVDQTFKGRGLGAALLADALERAIRSEIAAYAVMVDAKDEAAEAFYRYHGFIALPDSPRTLFLPLATVQAARRS
>NZ_CP017750.1|WP_071040743.1|285554_286769_-|hypothetical-protein
MPIVPIHQEFHLAPGAPPLAWAARAPKAGAHINLWWLYLAMCRANQLGLTLGDAGLATVAATAAAALSVCEADADGFRVTHDYGRLKDFVKPFLSGSLGAGLTLLQTMQAGYPWMAHWEDCGGPTADAHPDFVFFRDGTATAPSAVCLVESKGSRGPTSGPEAQADWERQIWPHRQQRLPLPDGSHLVPTEGRLVANELPGPSGRKRFRSTVVQGQFPRGLGFHAATFSRATLGTMGWTLTPSAGTRNRVVQTPPADAVGIQRACLRHVCRLLDLPATEASFAAPLSGEVDRDNPNRADLFFRALHELSRRRTPLDWGPDSRPDDVVVGLPQRIVMTNGTEWEVKLYCQYMVLWSILRDTPAQADHGAAPRQAEWADRGGVRIRLQGGDGVGLLARQSSGGTRD
>NZ_CP017750.1|WP_084085799.1|286949_288455_+|hypothetical-protein
MKSCRAHPAPALGWPAAGGTPTSCAHSGRPSMPAAAPARPLVLPPTALDAIATPFAGDLLGRQALAERLTTYLDRLRDGAVLAIDAPWGEGKTWFGRHWAKQLEQQGHPVAIIDAFGQDYAEDAFLLLASAIVGLRKAESGVTAKLKHRAGAVLRALLPVGTKALVNLAGRALGTSDLVDQVDEALGEAAEQATEKAGDAAGAWVKGRLDQWEAEQKTVQHFREALTEFAAETFNDTGKPTVILVDELDRCRPAFAVQLVERIKHFFDVPHLVFVLLMNRDQLEKAIRGVYGAETDAATYLGKFLHLSLRLPTARSVEPDGSIPGLSAYVFNTLERLGAVERDFADDFSLCAALFELSARDVERGCTLYSLATTGGDSANAALLAYAIALKLKHPALYAGLMQGRADTNVTCMEQLPAMLVALRMRDPYGTTRVADMTRLTIYQQALWALHYRWLYQHAPTSLGAHQAPKDEVAYNAHFPGVGDPQLFFQKTFRRLDLAIS
>NZ_CP017750.1|WP_084085801.1|288649_288883_+|hypothetical-protein
MSRDQPLPDGRYRARCRERCWERSLLGAAANGHSRVYPSADLVVVDGWAHFYRDCQEVWSCNPSYAATHFDVVAQGR
>NZ_CP017750.1|WP_071040864.1|288908_291020_+|tyrosine-type-recombinase/integrase
MQAEAVAPPARARRRRSVTRRHLHRGHFGFLRAIVQGLHARPMWERYLAEEGEIEAEQEAAAASEEEEPAAQFARHPKVRRVTTWLRAELRAAAGRAERFGMARLVHLDLGQIGRPGEALPSLEDFAAEAGLDGFSQAEQLEAYRGHFGRAVDREAKRASLMRRQLEAIDWLEGKYAQPVLAADGCRAWLADALAQRLEEAGVATLGQLIDRINGLGTGWWRALPAIGAGKARAIEAFLRQHAETLGKGVGEHVAVARRQRYAHELAAVVPRGLAAADTLVPLDKLVVPEALDGRLGAFRLPQARCLISAHNDYEAVLSWLRSKPGLPPDQVARLREKRRDLGSVPGPLDWLHYLSHTQRAYRKEAERFLLWAIVERQKPLSSMDTDDCLAYRDFLAAPPAHWCAPRSRERWSPIWRPFEGPLTPRAQAYALTVLGNLYSYLNEKNYLGGNPWTGVRPPRTAMPAMDVGRSLSTDQWQFVTRQLAALPPTSANQRLQVALPLLYSTGLRLAEVVSLTTADLDWVSLPRPGTREREEAWWLTVLGKRSKVRRVPVPDGVVAALGRYLAARGFADDPRDQREPVALLGHATDTAERTPWGKADTAGAAASLQPGTLYKQVKRFFQACARDLALVDARGAQRLAEASTHWLRHTHISHGLAAGVPIEVMQQNAGHDSLATTTRYVTTEDARRAAALRRFFEQGDSQ
>NZ_CP017750.1|WP_157128703.1|291073_291676_-|hypothetical-protein
MARTILSLAFVGLISGCATSSEYTRTGAALYAWENSRSAALVVADGDNKVRACTQFAMVENSYSADAKLKISDALLKAASAIHGVGTGTGTPNKDDAEATASAMSATIQKLGNALNTTTERTSFLMVGGFYICQLQANGLEAAKVHLLATELIKTAGTLQPTRTQYVQRPVAGSNGSGEADDSPPKTEGSEPKQPNTTAK
>NZ_CP017750.1|WP_084085803.1|291955_292207_+|H-NS-histone-family-protein
MSVEIERAAAITWIRVQMARHGISLEDLLAAGCFGVRKRSAATGRGGYANAAGETWDGEGAMPDWLQRAVNAGQVADFFRVGS
>NZ_CP017750.1|WP_071040745.1|292261_292909_-|hypothetical-protein
MTVNNRLRAILRQAYQPCSGIGSSCADARWDPTAGHVPRGQCGATTELDIVRLVLVCAEPSTPRRDEEYAQACSADEYISDAAIVSLGLLERKGTPFHENLRQILDLCWRDLPFSVQMERTWITNSVLCSAQTAGGRLPASMETRCATTYLWPALRLFPNATIIALGAKARDRLRRIGVTGFLEARSASPRSNQLNAAQESWKAVADEFRSRRAI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017750_1	1.1\|282431\|23\|NZ_CP017750\|CRISPRCasFinder	282431-282453	23	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	282431-282453	0	1.0
NZ_CP017750_1	1.2\|282478\|49\|NZ_CP017750\|CRISPRCasFinder	282478-282526	49	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	282478-282526	0	1.0
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	282551-282573	0	1.0
NZ_CP017750_1	1.4\|282598\|46\|NZ_CP017750\|CRISPRCasFinder	282598-282643	46	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	282598-282643	0	1.0
NZ_CP017750_1	1.5\|282668\|23\|NZ_CP017750\|CRISPRCasFinder	282668-282690	23	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	282668-282690	0	1.0
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	274614-274636	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NZ_AP020327	Mycobacterium avium subsp. hominissuis strain JP-H-1 plasmid p1-JPH1	136366-136388	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NC_023727	Mycobacterium phage Vista, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NC_027985	Mycobacterium phage UncleHowie, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MH371107	Mycobacterium phage Doddsville, complete genome	8771-8793	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MH051264	Mycobacterium phage Cobra, complete genome	8771-8793	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	KM363597	Mycobacteriophage Zonia, complete genome	8770-8792	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MG770212	Mycobacterium phage Haimas, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MH825705	Mycobacterium phage Mesh1, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MT952849	Mycobacterium phage Windsor, complete genome	8772-8794	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MK112555	Mycobacterium phage Zelda, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NC_028803	Mycobacterium phage OSmaximus, complete genome	8772-8794	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	JN638752	Mycobacterium phage Murdoc, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MG925346	Mycobacterium phage LeeLot, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MK112544	Mycobacterium phage Keitherie, complete genome	8770-8792	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MK279850	Mycobacterium phage Durga, complete genome	8770-8792	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MN585965	Mycobacterium phage Duggie, complete genome	8773-8795	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MT897901	Mycobacterium phage Adriana, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	KP027208	Mycobacterium phage Pipsqueak, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MF919519	Mycobacterium phage Longacauda, complete genome	8773-8795	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MK279858	Mycobacterium phage JakeO, complete genome	8773-8795	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MT310867	Mycobacterium phage Chaelin, complete genome	8772-8794	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MH590594	Mycobacterium phage PinheadLarry, complete genome	8774-8796	2	0.913
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NZ_CP011600	Phytobacter ursingii strain CAV1151 plasmid pCAV1151-215, complete sequence	20204-20226	3	0.87
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NZ_AP018757	Metakosakonia sp. MRY16-398 plasmid pMRY16-398_1, complete sequence	184484-184506	3	0.87
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NZ_AP015030	Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence	75584-75606	3	0.87
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NC_016624	Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence	363204-363226	3	0.87
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	NZ_CP026189	Enterobacteriaceae bacterium ENNIH2 plasmid pENT-812c, complete sequence	70025-70047	3	0.87
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	KR053197	Gordonia phage GRU3, complete genome	5214-5236	3	0.87
NZ_CP017750_1	1.3\|282551\|23\|NZ_CP017750\|CRISPRCasFinder	282551-282573	23	MH588544	Caulobacter phage CcrBL10, complete genome	140954-140976	3	0.87

1. spacer 1.1|282431|23|NZ_CP017750|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tggcttctccgtgcttcctgacc	CRISPR spacer
tggcttctccgtgcttcctgacc	Protospacer
***********************

2. spacer 1.2|282478|49|NZ_CP017750|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tggtttttggagccagcggcttcccgccgatcaaccagcaatggcagca	CRISPR spacer
tggtttttggagccagcggcttcccgccgatcaaccagcaatggcagca	Protospacer
*************************************************

3. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgacgctgcg	Protospacer
***********************

4. spacer 1.4|282598|46|NZ_CP017750|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttcaaccccaggttatctcgccatcctgtcggagcctatagcctcc	CRISPR spacer
ttcaaccccaggttatctcgccatcctgtcggagcctatagcctcc	Protospacer
**********************************************

5. spacer 1.5|282668|23|NZ_CP017750|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cagacgagcccgggaatcagctc	CRISPR spacer
cagacgagcccgggaatcagctc	Protospacer
***********************

6. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
tggcgttggccgccgacgctgcg	Protospacer
.*** ******************

7. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NZ_AP020327 (Mycobacterium avium subsp. hominissuis strain JP-H-1 plasmid p1-JPH1) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccggcgacgccgcg	Protospacer
************ ******.***

8. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NC_023727 (Mycobacterium phage Vista, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

9. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NC_027985 (Mycobacterium phage UncleHowie, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

10. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MH371107 (Mycobacterium phage Doddsville, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

11. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MH051264 (Mycobacterium phage Cobra, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

12. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to KM363597 (Mycobacteriophage Zonia, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

13. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MG770212 (Mycobacterium phage Haimas, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

14. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MH825705 (Mycobacterium phage Mesh1, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

15. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MT952849 (Mycobacterium phage Windsor, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

16. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MK112555 (Mycobacterium phage Zelda, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

17. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NC_028803 (Mycobacterium phage OSmaximus, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

18. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to JN638752 (Mycobacterium phage Murdoc, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

19. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MG925346 (Mycobacterium phage LeeLot, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

20. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MK112544 (Mycobacterium phage Keitherie, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

21. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MK279850 (Mycobacterium phage Durga, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

22. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MN585965 (Mycobacterium phage Duggie, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

23. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MT897901 (Mycobacterium phage Adriana, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

24. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to KP027208 (Mycobacterium phage Pipsqueak, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

25. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MF919519 (Mycobacterium phage Longacauda, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

26. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MK279858 (Mycobacterium phage JakeO, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

27. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MT310867 (Mycobacterium phage Chaelin, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

28. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MH590594 (Mycobacterium phage PinheadLarry, complete genome) position: , mismatch: 2, identity: 0.913

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgcctctgcg	Protospacer
*************** * *****

29. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NZ_CP011600 (Phytobacter ursingii strain CAV1151 plasmid pCAV1151-215, complete sequence) position: , mismatch: 3, identity: 0.87

cggccttggccgccgacgctgcg	CRISPR spacer
tggcctcggccgccgacgctgcc	Protospacer
.*****.***************

30. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NZ_AP018757 (Metakosakonia sp. MRY16-398 plasmid pMRY16-398_1, complete sequence) position: , mismatch: 3, identity: 0.87

cggccttggccgccgacgctgcg	CRISPR spacer
tggcctcggccgccgacgctgcc	Protospacer
.*****.***************

31. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NZ_AP015030 (Pseudomonas putida strain KF715 plasmid pKF715A, complete sequence) position: , mismatch: 3, identity: 0.87

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgacgccacc	Protospacer
*******************..*

32. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NC_016624 (Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence) position: , mismatch: 3, identity: 0.87

cggccttggccgccgacgctgcg	CRISPR spacer
cggccttggccgccgacgccggc	Protospacer
*******************.*

33. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to NZ_CP026189 (Enterobacteriaceae bacterium ENNIH2 plasmid pENT-812c, complete sequence) position: , mismatch: 3, identity: 0.87

cggccttggccgccgacgctgcg	CRISPR spacer
tggcctcggccgccgacgctgcc	Protospacer
.*****.***************

34. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to KR053197 (Gordonia phage GRU3, complete genome) position: , mismatch: 3, identity: 0.87

cggccttggccgccgacgctgcg	CRISPR spacer
acgcctcggccgccgacgctgcg	Protospacer
  ****.****************

35. spacer 1.3|282551|23|NZ_CP017750|CRISPRCasFinder matches to MH588544 (Caulobacter phage CcrBL10, complete genome) position: , mismatch: 3, identity: 0.87

cggccttggccgccgacgctgcg	CRISPR spacer
acgccttggccgccgacggtgcg	Protospacer
  **************** ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18864 : 84899

Salmonella_phage(20.0%)

integrase,transposase

attL 13562:13577|attR 35033:35048

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
13562:13577	attL	NA	NA	NA	NA
WP_029306638.1\|18864_20538_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VH72	Gordonia_phage	1.1e-06	25.0
WP_071040582.1\|20665_20893_-	hypothetical protein	NA	NA	NA	NA
WP_004635320.1\|20889_21828_-	transcriptional regulator	NA	NA	NA	NA
WP_004635327.1\|22690_23098_-	hypothetical protein	NA	NA	NA	NA
WP_004635330.1\|23205_23664_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	3.2e-12	36.2
WP_020206397.1\|23913_24564_+	heavy metal efflux RND transporter CzcN	NA	NA	NA	NA
WP_004635335.1\|24593_24773_+	hypothetical protein	NA	NA	NA	NA
WP_137924345.1\|24878_25226_+	CDF family cobalt-zinc-cadmium transporter CzcI	NA	NA	NA	NA
WP_004635338.1\|25301_26558_+	heavy metal efflux RND transporter CzcC	NA	NA	NA	NA
WP_004635340.1\|26575_28138_+	heavy metal efflux RND transporter CzcB	NA	NA	NA	NA
WP_004635342.1\|28154_31346_+	heavy metal efflux RND transporter CzcA	S5VTK5	Leptospira_phage	1.4e-77	24.4
WP_004635344.1\|31396_32347_+	cation transporter	A0A1V0SED0	Indivirus	6.3e-10	28.3
WP_008646724.1\|32348_33026_+	heavy metal homeostasis two-component system response regulator CzcR	W8CYM9	Bacillus_phage	4.9e-33	33.8
WP_011229349.1\|33030_34461_+	sensor histidine kinase CzcS	W8CYF6	Bacillus_phage	1.8e-13	21.9
WP_011514820.1\|34569_34971_+	copper-binding periplasmic protein CzcE	NA	NA	NA	NA
WP_008646716.1\|35269_35548_-	hypothetical protein	NA	NA	NA	NA
35033:35048	attR	NA	NA	NA	NA
WP_004633552.1\|35723_36095_+\|transposase	transposase	NA	NA	NA	NA
WP_004633551.1\|36136_36427_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_009238807.1\|36489_38019_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.4e-115	46.1
WP_011229350.1\|38141_39209_-	porin	NA	NA	NA	NA
WP_008650726.1\|39505_39928_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_011514822.1\|40427_42917_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.9e-112	39.0
WP_008650724.1\|42974_43277_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_008650723.1\|43509_44631_-	glycosyltransferase family 2 protein	U5P087	Shigella_phage	3.3e-74	48.3
WP_008650722.1\|44627_45011_-	GtrA family protein	NA	NA	NA	NA
WP_008650720.1\|45007_46615_-	glycosyl transferase	NA	NA	NA	NA
WP_008650714.1\|48049_48295_+	hypothetical protein	NA	NA	NA	NA
WP_080709916.1\|50457_50982_-	cytochrome c	NA	NA	NA	NA
WP_080672773.1\|53277_53646_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_080672772.1\|53621_53837_+	hypothetical protein	NA	NA	NA	NA
WP_011229360.1\|55607_56618_-\|transposase	IS30-like element ISRme10 family transposase	Q9MBM9	Staphylococcus_prophage	1.2e-40	34.3
WP_011229361.1\|56702_56966_+	hypothetical protein	NA	NA	NA	NA
WP_157128667.1\|60897_61275_+	hypothetical protein	NA	NA	NA	NA
WP_017514740.1\|61571_61772_+	hypothetical protein	NA	NA	NA	NA
WP_011229366.1\|61846_62923_-	signal peptidase II	NA	NA	NA	NA
WP_011229367.1\|62919_65319_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	6.2e-147	48.1
WP_008645748.1\|65405_65843_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_008645747.1\|65964_67893_+	c-type cytochrome	NA	NA	NA	NA
WP_035832055.1\|68191_69370_+	MFS transporter	NA	NA	NA	NA
WP_001138070.1\|69780_72747_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.9
WP_027982055.1\|72749_73319_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	2.2e-50	88.6
WP_008652068.1\|73224_74226_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_003132004.1\|74222_74459_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000995360.1\|74455_74821_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_003156770.1\|74838_76524_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	5.5e-41	29.3
WP_003131987.1\|76595_76871_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_006224622.1\|76883_77234_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_003131969.1\|77305_77740_+	mercury resistance transcriptional regulator MerR	NA	NA	NA	NA
WP_157128668.1\|77729_78152_-	hypothetical protein	NA	NA	NA	NA
WP_071040583.1\|79106_79973_+	hypothetical protein	NA	NA	NA	NA
WP_071040584.1\|79987_80386_-	hypothetical protein	NA	NA	NA	NA
WP_071040585.1\|80382_80688_-	H-NS histone family protein	NA	NA	NA	NA
WP_084085738.1\|81054_81252_-	hypothetical protein	NA	NA	NA	NA
WP_071040586.1\|81414_81618_-	hypothetical protein	NA	NA	NA	NA
WP_071040587.1\|82486_82726_-	hypothetical protein	NA	NA	NA	NA
WP_071040588.1\|82709_83159_-	hypothetical protein	NA	NA	NA	NA
WP_071040589.1\|83227_83464_-	hypothetical protein	NA	NA	NA	NA
WP_071040591.1\|83663_84899_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	4.9e-132	57.7

DBSCAN-SWA_2

321201 : 373589

Salmonella_phage(15.38%)

integrase,transposase

attL 318388:318405|attR 374505:374522

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
318388:318405	attL	NA	NA	NA	NA
WP_001138070.1\|321201_324168_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.9
WP_071040750.1\|325014_326292_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_071040751.1\|326434_327316_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_071040752.1\|327312_328326_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_071040753.1\|328322_329117_+	ATP-binding cassette domain-containing protein	A0A285PWH2	Cedratvirus	4.0e-10	27.4
WP_071040754.1\|329110_329824_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-10	24.6
WP_071040755.1\|329848_330145_+	hypothetical protein	NA	NA	NA	NA
WP_071040756.1\|330218_331019_+	sterol desaturase family protein	NA	NA	NA	NA
WP_071040757.1\|331047_331245_+	hypothetical protein	NA	NA	NA	NA
WP_071040758.1\|331346_332000_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_071040759.1\|332350_333106_+	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	4.4e-06	24.4
WP_084085811.1\|333099_333843_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_024570391.1\|334749_337683_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	1.0e-47	23.0
WP_024570392.1\|337820_338876_-	DMT family transporter	NA	NA	NA	NA
WP_024570393.1\|338914_342145_-	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	1.5e-50	21.4
WP_024570394.1\|342141_343329_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_024570395.1\|343325_344582_-	TolC family protein	NA	NA	NA	NA
WP_017514986.1\|344655_345231_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_024570396.1\|345227_345674_-	periplasmic heavy metal sensor	NA	NA	NA	NA
WP_017514988.1\|345670_345958_-	CnrY/NccY family anti-sigma factor	NA	NA	NA	NA
WP_017514989.1\|346091_347066_+	chromate resistance protein	NA	NA	NA	NA
WP_024570397.1\|347105_348311_+	chromate transporter	NA	NA	NA	NA
WP_017515809.1\|348329_348923_+	superoxide dismutase	NA	NA	NA	NA
WP_017515810.1\|348940_349279_+	rhodanese family chromate resistance protein ChrE	NA	NA	NA	NA
WP_024570398.1\|349275_349737_+	chromate resistance protein	NA	NA	NA	NA
WP_017515956.1\|349754_350381_+	hypothetical protein	NA	NA	NA	NA
WP_017515957.1\|350635_350920_-	H-NS histone family protein	NA	NA	NA	NA
WP_029306638.1\|351152_352826_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VH72	Gordonia_phage	1.1e-06	25.0
WP_071040760.1\|353347_354214_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_071040761.1\|354210_355221_-	hydroxyacid dehydrogenase	A0A1B1IVB5	uncultured_Mediterranean_phage	5.8e-22	28.9
WP_137884915.1\|355259_356060_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.4e-24	32.8
WP_071040762.1\|356090_356939_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_071040763.1\|357063_357954_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_071040764.1\|357968_358829_-	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
WP_084085815.1\|359082_359529_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	7.7e-11	33.3
WP_084085819.1\|360334_360610_-	Killer protein	A0A2L1IV28	Escherichia_phage	2.2e-16	43.8
WP_157128704.1\|360599_361277_-	hypothetical protein	A0A1L7N233	Ralstonia_phage	7.3e-29	44.1
WP_084085821.1\|361814_362036_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_084085822.1\|362298_362532_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_071040768.1\|366224_367133_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_071040769.1\|367129_369436_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
WP_071040770.1\|369432_369915_-	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	1.7e-08	30.2
WP_157128705.1\|370136_371420_+	MFS transporter	NA	NA	NA	NA
WP_011517431.1\|372380_373589_+\|transposase	IS4-like element ISBvi1 family transposase	NA	NA	NA	NA
374505:374522	attR	NA	NA	NA	NA

DBSCAN-SWA_3

450280 : 514781

Bacillus_phage(18.75%)

integrase,transposase

attL 450862:450881|attR 483002:483021

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157128356.1\|450280_451091_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	2.3e-21	31.9
450862:450881	attL	NA	NA	NA	NA
WP_084085834.1\|451516_451933_+	hypothetical protein	NA	NA	NA	NA
WP_071022964.1\|452124_452505_+	hypothetical protein	NA	NA	NA	NA
WP_084085836.1\|452514_452730_+	hypothetical protein	NA	NA	NA	NA
WP_071022962.1\|453221_453491_+	hypothetical protein	NA	NA	NA	NA
WP_071040819.1\|453575_453965_+	hypothetical protein	NA	NA	NA	NA
WP_071040820.1\|454031_455588_+	hypothetical protein	NA	NA	NA	NA
WP_071040821.1\|455837_456863_+	ATP-binding protein	M4SLY4	Vibrio_phage	4.7e-27	26.0
WP_071040822.1\|456952_457870_+	hypothetical protein	NA	NA	NA	NA
WP_071040823.1\|457878_459063_+	hypothetical protein	G3MAV6	Bacillus_virus	1.6e-50	33.5
WP_071040824.1\|459224_459611_+	hypothetical protein	NA	NA	NA	NA
WP_071022945.1\|459720_460119_-	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_071040825.1\|460139_460724_-	hypothetical protein	NA	NA	NA	NA
WP_084085838.1\|460782_461385_-	hypothetical protein	NA	NA	NA	NA
WP_071040826.1\|462277_463549_+	hypothetical protein	NA	NA	NA	NA
WP_071040827.1\|463676_465062_+	metallophosphatase family protein	NA	NA	NA	NA
WP_071040828.1\|465218_465740_+	hypothetical protein	NA	NA	NA	NA
WP_071040829.1\|465727_468052_+	nuclease SbcCD subunit C	Q6NDW9	Leptospira_phage	1.8e-26	35.8
WP_071040831.1\|468481_468994_+	NADAR family protein	A0A1S6UAJ7	Serratia_phage	1.1e-34	44.2
WP_071040832.1\|469220_469658_-	DNA-binding protein	NA	NA	NA	NA
WP_071040833.1\|469755_470694_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_157128714.1\|471288_471926_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	3.3e-31	38.7
WP_157128715.1\|472214_472580_-	hypothetical protein	NA	NA	NA	NA
WP_157128717.1\|474204_475113_-	nitronate monooxygenase	NA	NA	NA	NA
WP_071040835.1\|475209_476553_-	short-chain fatty acid transporter	NA	NA	NA	NA
WP_071040874.1\|476599_477052_-	dehydratase	NA	NA	NA	NA
WP_071040875.1\|477066_478629_-	AMP-binding protein	NA	NA	NA	NA
WP_071040836.1\|479027_479768_+	transcriptional regulator TrmB	NA	NA	NA	NA
WP_004635335.1\|481791_481971_+	hypothetical protein	NA	NA	NA	NA
WP_011229345.1\|482076_482424_+	CDF family cobalt-zinc-cadmium transporter CzcI	NA	NA	NA	NA
WP_071040839.1\|482499_483756_+	heavy metal efflux RND transporter CzcC	NA	NA	NA	NA
483002:483021	attR	NA	NA	NA	NA
WP_004635340.1\|483773_485336_+	heavy metal efflux RND transporter CzcB	NA	NA	NA	NA
WP_004635342.1\|485352_488544_+	heavy metal efflux RND transporter CzcA	S5VTK5	Leptospira_phage	1.4e-77	24.4
WP_004635344.1\|488594_489545_+	cation transporter	A0A1V0SED0	Indivirus	6.3e-10	28.3
WP_008646724.1\|489546_490224_+	heavy metal homeostasis two-component system response regulator CzcR	W8CYM9	Bacillus_phage	4.9e-33	33.8
WP_011229349.1\|490228_491659_+	sensor histidine kinase CzcS	W8CYF6	Bacillus_phage	1.8e-13	21.9
WP_011514820.1\|491767_492169_+	copper-binding periplasmic protein CzcE	NA	NA	NA	NA
WP_008646716.1\|492467_492746_-	hypothetical protein	NA	NA	NA	NA
WP_011229350.1\|492928_493996_-	porin	NA	NA	NA	NA
WP_085960481.1\|494112_495299_-\|transposase	IS3-like element ISRme13 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.2e-56	39.7
WP_008650726.1\|495583_496006_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_011514822.1\|496505_498995_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.9e-112	39.0
WP_008650724.1\|499052_499355_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_008650723.1\|499587_500709_-	glycosyltransferase family 2 protein	U5P087	Shigella_phage	3.3e-74	48.3
WP_008650722.1\|500705_501089_-	GtrA family protein	NA	NA	NA	NA
WP_008650720.1\|501085_502693_-	glycosyl transferase	NA	NA	NA	NA
WP_049768032.1\|503542_503869_+	hypothetical protein	NA	NA	NA	NA
WP_012435773.1\|503967_504531_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_099047663.1\|504676_504799_-	YHYH domain-containing protein	NA	NA	NA	NA
WP_071037935.1\|507316_508639_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	4.0e-63	53.5
WP_071040841.1\|508980_509844_-	hypothetical protein	NA	NA	NA	NA
WP_071040842.1\|510080_510335_-	H-NS histone family protein	NA	NA	NA	NA
WP_071040843.1\|510654_511431_+	EAL domain-containing protein	NA	NA	NA	NA
WP_071040844.1\|511563_512844_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-22	39.5
WP_071037935.1\|513458_514781_-\|transposase	IS5 family transposase	K4ICS3	Acidithiobacillus_phage	4.0e-63	53.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017749

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP017748

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP017750

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection