CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015970	Acidipropionibacterium acidipropionici strain F3E8 chromosome, complete genome	11 crisprs	csa3,WYL,cas3,DinG,DEDDh,csb1gr7,csb2gr5,csb3,cas1,cas2	2	21	2	0

1. NZ_CP015970

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015970_1

• CRISPR_ID: NZ_CP015970_1
• CRISPR_location: 227013-227104
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: DEDDh

Consensus repeat of NZ_CP015970_1

Consensus_repeat	Method
GGGGACGACCCCTCCACGTCGCTTCG	CRISPRCasFinder

spacers of NZ_CP015970_1

>1.1|227039|40|NZ_CP015970|CRISPRCasFinder
CTCCTGCCTCCCCGCGCGGGTCGGGTCAGCGGTCGCATCC

CRISPR arrays and Neighbor proteins around NZ_CP015970_1

CRISPR arrays

The CRISPR arrays of NZ_CP015970_1

>merge|NZ_CP015970|1|227013-227104|CRISPRCasFinder
GGGGACGACCCCTCCACGTCGCTTCGCTCCTGCCTCCCCGCGCGGGTCGGGTCAGCGGTCGCATCCGGGGAGGACCCCTCCACGTCGCTTCG

>NZ_CP015970|1|1|227013-227104|CRISPRCasFinder
GGGGACGACCCCTCCACGTCGCTTCG	CTCCTGCCTCCCCGCGCGGGTCGGGTCAGCGGTCGCATCC
GGGGAGGACCCCTCCACGTCGCTTCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062820509.1|231946_232360_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_015069965.1|217367_217880_+|peptidylprolyl-isomerase	unknown	unknown	gnl|CDD|223725
NZ_CP015970.1|WP_062820502.1|222163_223249_+|ROK-family-glucokinase	unknown	unknown	gnl|CDD|273246
NZ_CP015970.1|WP_062820510.1|232507_233197_+|thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|238317
NZ_CP015970.1|WP_071001076.1|235224_237480_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|226482
NZ_CP015970.1|WP_062820872.1|217960_218605_+|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl|CDD|366759
NZ_CP015970.1|WP_062820511.1|233218_234319_-|polyprenyl-synthetase-family-protein	unknown	unknown	gnl|CDD|173833
NZ_CP015970.1|WP_082816079.1|230344_231805_-|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP015970.1|WP_015069967.1|218672_218948_-|Lrp/AsnC-ligand-binding-domain-containing-protein	unknown	unknown	gnl|CDD|366431
NZ_CP015970.1|WP_062820503.1|224100_224955_+|hypothetical-protein	unknown	unknown	gnl|CDD|153251
NZ_CP015970.1|WP_062820506.1|228651_229299_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|225130
NZ_CP015970.1|WP_062820505.1|226328_227003_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NZ_CP015970.1|WP_062820512.1|234380_235298_+|5,10-methylenetetrahydrofolate-reductase	unknown	unknown	gnl|CDD|273212
NZ_CP015970.1|WP_062820501.1|221031_222159_+|C40-family-peptidase	unknown	unknown	gnl|CDD|366353
NZ_CP015970.1|WP_041707477.1|227183_228578_+|3-deoxy-7-phosphoheptulonate-synthase-class-II	unknown	unknown	gnl|CDD|366662
NZ_CP015970.1|WP_062820500.1|218965_220780_-|DEDD-exonuclease-domain-containing-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl|CDD|236123
NZ_CP015970.1|WP_062820504.1|224938_226165_+|hypothetical-protein	unknown	unknown	gnl|CDD|226951
NZ_CP015970.1|WP_028701692.1|223333_224104_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl|CDD|153251
NZ_CP015970.1|WP_099093010.1|229300_230248_-|DMT-family-transporter	unknown	unknown	gnl|CDD|223769
NZ_CP015970.1|WP_071001164.1|237712_238927_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP015970.1|WP_062820500.1|218965_220780_-|DEDD-exonuclease-domain-containing-protein	DEDDh	cd06127_DEDDh_CAS-I	1.6e-43	143.4	3.4

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_015069965.1|217367_217880_+|peptidylprolyl-isomerase	gnl|CDD|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	1.14374e-68
NZ_CP015970.1|WP_062820502.1|222163_223249_+|ROK-family-glucokinase	gnl|CDD|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	8.46569e-88
NZ_CP015970.1|WP_062820510.1|232507_233197_+|thiamine-phosphate-synthase	gnl|CDD|238317	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.	4.33708e-35
NZ_CP015970.1|WP_071001076.1|235224_237480_-|AAA-family-ATPase	gnl|CDD|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	2.09164e-74
NZ_CP015970.1|WP_062820872.1|217960_218605_+|rhomboid-family-intramembrane-serine-protease	gnl|CDD|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	2.56165e-11
NZ_CP015970.1|WP_062820511.1|233218_234319_-|polyprenyl-synthetase-family-protein	gnl|CDD|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	9.23755e-59
NZ_CP015970.1|WP_082816079.1|230344_231805_-|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.00666e-103
NZ_CP015970.1|WP_015069967.1|218672_218948_-|Lrp/AsnC-ligand-binding-domain-containing-protein	gnl|CDD|366431	pfam01037, AsnC_trans_reg, Lrp/AsnC ligand binding domain. The l-leucine-responsive regulatory protein (Lrp/AsnC) family is a family of similar bacterial transcription regulatory proteins. The family is named after two E. coli proteins involved in regulating amino acid metabolism. This entry corresponds to the usually C-terminal regulatory ligand binding domain. Structurally this domain has a dimeric alpha/beta barrel fold.	1.75817e-13
NZ_CP015970.1|WP_062820503.1|224100_224955_+|hypothetical-protein	gnl|CDD|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.05769e-11
NZ_CP015970.1|WP_062820506.1|228651_229299_+|MBL-fold-metallo-hydrolase	gnl|CDD|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	1.71002e-16
NZ_CP015970.1|WP_062820505.1|226328_227003_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.12412e-58
NZ_CP015970.1|WP_062820512.1|234380_235298_+|5,10-methylenetetrahydrofolate-reductase	gnl|CDD|273212	TIGR00676, 510-methylenetetrahydrofolate_reductase., 5,10-methylenetetrahydrofolate reductase, prokaryotic form. The enzyme activities methylenetetrahydrofolate reductase (EC 1.5.1.20) and 5,10-methylenetetrahydrofolate reductase (FADH) (EC 1.7.99.5) differ in that 1.5.1.20 (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while 1.7.99.5 (assigned in many bacteria) is flexible with respect to the acceptor; both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as 1.5.1.20 and 1.7.99.5, this model describes the subset of proteins found in bacteria, and currently designated 1.7.99.5. This protein is an FAD-containing flavoprotein. [Amino acid biosynthesis, Aspartate family].	5.02338e-112
NZ_CP015970.1|WP_062820501.1|221031_222159_+|C40-family-peptidase	gnl|CDD|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.83555e-33
NZ_CP015970.1|WP_041707477.1|227183_228578_+|3-deoxy-7-phosphoheptulonate-synthase-class-II	gnl|CDD|366662	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family. Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway.	0
NZ_CP015970.1|WP_062820500.1|218965_220780_-|DEDD-exonuclease-domain-containing-protein	gnl|CDD|236123	PRK07883, PRK07883, DEDD exonuclease domain-containing protein.	0
NZ_CP015970.1|WP_062820504.1|224938_226165_+|hypothetical-protein	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.3589e-18
NZ_CP015970.1|WP_028701692.1|223333_224104_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl|CDD|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	5.68538e-49
NZ_CP015970.1|WP_099093010.1|229300_230248_-|DMT-family-transporter	gnl|CDD|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	4.27433e-16

Protein sequences

>NZ_CP015970.1|WP_062820505.1|226328_227003_+|response-regulator-transcription-factor
MTTSAAGGPGTRVMLVDDHPMWIDALGQDLTADGFDIVAVAHDGSECLRRARAAQPDVLVIDLKIPEPDGATCTQLLTTEFPRMHVLVISASGEREDVLRAAKAGACGYMVKSATRAELLDGVRRTAQGDAVFTPGLAGLVLGEFRRMAIQSGGEDDSRPRLTDREVEVLRRVAKGMAYREIADELVVSHRTVQNHVQNVLRKLQLHNRVELTLYALENGIGPD
>NZ_CP015970.1|WP_062820504.1|224938_226165_+|hypothetical-protein
MGTSTEQTDGRPEHDGHGGAPHFTPLSTARVQHIVTVLRWVFLAHAVLMTVVRWDTVAHPGWMLALLAVMLVWTAIVTVQSRLRGLRWRPVVAVDLAVSVLVTVTSRVVLGPGVPTAGFEGVGYYWVVCAPLAVALSYGGVAGALAALLIILPGAFGVGHGHLWAWSADLLLLASCWGAGRLMDQMRNLLAENQRSHAITARMAERERLGRIVHDGALQVLSMVEREGPELGERGVVLAGLAREQGAQLRRLLQSAAGESALEADPDSGTVDLVATIEDHGSESVTVSAMAGELLLPAETVHEIDAALQQVLSNVAQHAGPGAHCWILIEQEERTIVISVRDNGVGMSPEQADQASREGRMGISRSIIGRIHDVGGTSEMTSAPGHGVEWEFRVPLDEKGGRPPLNPS
>NZ_CP015970.1|WP_062820503.1|224100_224955_+|hypothetical-protein
MSRLPRWTGGQVDLTGEPLPDGPVVVAVHHTRYDDAVVVRAALHAVRSPWLGLVTPTRAVPWGTSARSRALAALRAGRVIVVFPEGSTAPGRAIYKGDVEVAHLALEAGAPVVPALLAEDQSALQLGAPLDFSRHASIPHSRAVLRAVTDEVMEALSGLADLPYHDLPAAAARQEEVQARRERVRADRAGRAAARQKAALQRQEAKAEAAEEAADLAQAAISAREAARSQAREAALADRLRAAGIRPGVPDDGETDGGATPRTPDSAATDDRETDEGDTDGDQH
>NZ_CP015970.1|WP_028701692.1|223333_224104_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MWYQVFKVGLFGPGVRALWRPWVVGEENLPREGGAVVACNHISVLDPIIVAAMLDRQMTYPAKKELFQGDHGLWSKIVAWFLKAVDQVPLDRSGGKRSVEGMAPVLTRLGEGGLIGIFPEGTRSADGELYKGKTGVARMALHADVPVVPVALIGTEPVKGRFGIPTVRHPGVIIGEPLHFSELAGRQDEVAVLRWVTNEVMDAIQRLGGQQYVDVYGFRVKYGNLKGKDLSRWRRPRPGGTPAPAPRETDRAGEQR
>NZ_CP015970.1|WP_062820502.1|222163_223249_+|ROK-family-glucokinase
MLSVGIDIGGTKVAAGVVDEQGAILRRLKRPTPSHSPEAVENAIVESVAELSVGLDVGAVGIGAAGWVDTEQALVRFSPHLAWRNEPLRDRLAIRISVPVLVDNDANAAAWAEYRFGAGQGSRVMVCLTLGTGIGGALVINGRMFRGRYGMAGEFGHMTVVPDGHWCPCGNRGCWEQYASGNSLVRDAKALIAEGSPRAQGLLDHVAGRDPDQLIGPDVTAAAVDGDATAIELIADVGTWLGKGMAGLGAALDPDLFVIGGGVSAAGELLLGPARTAFARNLTGRGFRPLAEIEHARFGPDAGLIGAADLARHSIAEPPGPARGFWPRRRHPRRTVRRRPILHTFTSGFGAPVEQGSEPRP
>NZ_CP015970.1|WP_062820501.1|221031_222159_+|C40-family-peptidase
MAQNRQADSKTRGAEKGRRLGRGLAATALSSAIVVSGLVAGQTRAAAEPDTVSEAKSELAAIEDQSHKLDAQYTTAQANLDKAEKSLKSAEKDLVSQRAKVASMRKTLSALAANDYQNGNISLSAQMVTSGDAGQFLSRLTTMQNVSDRTKSRFQSFQSEQARLQTLEKQAASDRTTIKASRDSQAVLLKKTKAKEADAKKVLASLTAQEQQKLAREQAAAAQSRANAASQNSRSEVRSDTSASSTSSSSSSSSSSTSASGRAATAIAFAKSKIGGPYVYGGTGPTGYDCSGLMQAAWAAAGVSLPRTSQEQFGAGTSVSTSNLQPGDLVFYYSGPSHVGMYIGGGQIVHAANPSAGIKISSVGEMPITGARHVG
>NZ_CP015970.1|WP_062820500.1|218965_220780_-|DEDD-exonuclease-domain-containing-protein
MSTMTAQDLQPSFDDLGTPLFDVTFCVVDLETTGGSGDDEITEIGAVKVRGGEVLGELATLVRPGSHIRGSVQMLTGITDEMVANAPSIGSVLPSWLEFSRGCVLVAHNARFDIGFLRRACDAHERPWPGNTVLDTLALARSCLGRDEVHDHKLGTLARYFSATTSPSHRALDDARATVDVMHGIIERVSGLGVTTLEDLLEVTHKVAPGRRARRTWADSLPESPGIYWFQADRPTAGQPPEVLYVGTSVNVRRRVRQYFTASETRRRMDEMVRVATGVDALACATTLEAGVRELRMIDAHSPRYNRRSRRQNAVNWVCLTDDRYPRLSVVRSTSRTDRTYWGPFTNRQEAADAGSLIAEFAGIRQCSGTPASHPHGCPLAEMGRCVAPCLTGGGDDPSTLAQALAASPTGSSPRPPSTDPYRGAVDRARQAMTVDVRPLIEAASTRIASLSRQERFEEAAALTSRARSCLRAGRRRARIASLADCAEIVAARPVDRSWEIHIVRHGRLAAAAHSPAGQNPVPTIETARATAETVTASAPGIPACTVEEAELVAEWLETPGVRLVDIDGSWDWPVHCAAEDRALSDAVAMASATISDQECGRTA
>NZ_CP015970.1|WP_015069967.1|218672_218948_-|Lrp/AsnC-ligand-binding-domain-containing-protein
MFNAIVLIQASSNRIPEVAQEVLALPGVSEVYSTAGHIDLIAMVRASTMEEVAEIIADRINKVEGVVDTDTHIALRTYSEHDLEAMFSIGD
>NZ_CP015970.1|WP_062820872.1|217960_218605_+|rhomboid-family-intramembrane-serine-protease
MGDRWAEHPIRPGRSDSPASIVLAAATLVVAVLSNLVPLAGWLAAGASPVFDFQMWRPLLYALTTGSILQGIINGVFLVLVGRSLEPLLGSADFAAVYLLSGLGGATALSLTGVPASFSGAICGIFGILAATAVIKRLEHQDIRGDIILITLFVIWGILAGARDWTADIGAIVIGAVIGWVWARNRWATRGRSRIAYAVVAVVCLAALVVTWLT
>NZ_CP015970.1|WP_015069965.1|217367_217880_+|peptidylprolyl-isomerase
MASTATLHTNHGDIVLNLFGDQAPKTVKNFVGLADGTQEYTDPLTGQKTTGRFYDGLTFHRIIDGFMIQGGCPLGTGTGGPGYQFADEFHPDLHFSKPYLLAMANAGPGTNGSQFFITVAPTPHLNRRHTIFGEVADEASRKVVDEIAQVKTDRMDRPADPVVIETVEIA
>NZ_CP015970.1|WP_041707477.1|227183_228578_+|3-deoxy-7-phosphoheptulonate-synthase-class-II
MLNGVPNLAELHAMPQMQQPSYPDPAAVADVVSRLRGLPPLVFAGECDDLRDKLAAVADGRGFLLQGGDCAETFAGVNADNIKGKLRVLLSMAVVMTYAAQVPVVKVGRIAGQYAKPRSKDTETRNGVTLPSYRGDAVNGFEFTPESRTHDPRRLLQIYNSSAATLNLVRAFVKGGFADLRGINAWNADFVRNSNVEARYEALAHEIESALAFMIACGVDDEQLSTVDFYASHEALLLDYEHAMTRIDSRSQLPYDTSGHLLWIGERTRQPDGAHVAFMRRVNNPLGIKLGPSTSGEDAVLTAELLDPDRIPGRITFITRMGAGNVREKLPPIIDAVESTGRKVVWTCDPMHGNTFESANGFKTRSFVDVCAEVNAFFDVHEEMGTWPGGVHVELTGDDVTECLGGVDALDEADLANRYETACDPRLNRNQSLELAFMIAERLSDGRLKRHAVSPLEPFRGMDM
>NZ_CP015970.1|WP_062820506.1|228651_229299_+|MBL-fold-metallo-hydrolase
MRITHLGHSCVLVEAADARILIDPGNFSDAWHGLTGLTAILVTHAHPDHVDPEHIEELVNANSGAICRAEKGAAAAVPQLDADPIVPGDIIEVGGARIEAVGGQHAVIHRDIPRIGNVGYLVGEGLGTILFHPGDELDETPHGVDVLACPAYGPWAAMKETVDFARAVGARDGFLIHDGLLNERGWRTAFDRHDEMTDTTFHDLRDGRPWEAPGR
>NZ_CP015970.1|WP_099093010.1|229300_230248_-|DMT-family-transporter
MVGFRSSRLAPAALMVMALLWGSTLVVMKGAYSHLSPTDLLANRFLVGALALGLLVPRAWRANARTIGKGLLLGLLFGAGQVLQAVGLSSTPASVNGFIGGLYVVVTPLLGAIFFGKRVPRQIWIAVALATVGLGSLALDPADLGAGIGVGELLTFAASVCFAAQIVALGRFATARNVASLALYQTIGAALVCAICAAPGGIRIASSGSEWFAVLYLGVVCSAAIAVLQSWAQARVEATRASVIMCTEPLWGAVFAIGLAGDPVTLRIILGGVSILAAMVMVVRPPRRRRGLTQDEAGPRQIEQAGIGDLVGDSK
>NZ_CP015970.1|WP_082816079.1|230344_231805_-|serine/threonine-protein-kinase
MSMTVSTDPLVGRVLGGRYEITSRIARGGMATVYRAQDTHLRRGVAVKVMHEGLYEDEEFARRFDLEAKAAARLVNPHVVSVFDQGVDDMRPYIVMEYVPGCTLRHVIVQEAPLTPRHALAMLEPVVSALASAHDDGLVHRDVKPENVLISDRGQIKVADFGLARAVTAQSATATGLLVGTVSYLPPELVVSNRADERSDVYSTGIVLFEMLTGHKPHTGDTPIQVAWAHVHEDVPAPSTYLAGEGRRGRELAEHIPAYLDALVRTCTARDPSDRPADGRVLLGLIRSARVSLAQGRADDPAITSLMHRGGGPRPTSPVPAPGAPTGSPARTRTPVSPIDRAGAVRPGAVATPRTDVSHRPDASHRAVSPRTPREAPNPTIRSAAPTRPRNPGAARTPRAGTVPTARVRSGRAPAPARTRNSYRGRRNLIAMLLITALAVTVGLLAYRFGVSLRTAASPVAVSGAAGSSSTTAAPLTGPEDPPSIR
>NZ_CP015970.1|WP_062820509.1|231946_232360_-|hypothetical-protein
MSIRKPIVAVITAVTILTGCSGRAQEAPSTPSADSDSRQVVTTYLKAAVGHDCQVTRSLTASSTWAWCDKPRMTAYKGIGSVVKLSAQEAGVALECYPMTVTTRDGQGRGLKEGTRPWTLCFQHTEAGYKLYQQGMR
>NZ_CP015970.1|WP_062820510.1|232507_233197_+|thiamine-phosphate-synthase
MTALLGLAARLQMSTLCLVTDLTPRAGELVDVVVSAVAGGVDMVQIRDSDADHEALAEGVAAIADALAGSQVLLGVHGVAATVEGTRADVLHLSAEGYPGPARTALGPHGLLGRSAHDVAQLERASADCDYLFIGPVWSGPVRRQGGLELVGRAALDCRGHDDRPIPWFAAGGITAHNVGRVLEAGARRVAVGRAVTAASDPGEVARQISRAVGRAWLDDPLTGPVQPG
>NZ_CP015970.1|WP_062820511.1|233218_234319_-|polyprenyl-synthetase-family-protein
MSAPFDPADPAGDSFRQAVQSAITGFLVDQRPVLAGIGEELEPLRLAAVDYTGGGKRLRPAFSYWGAVAAAGQPVDAAPLLRAVSSLELLHVSALMHDDLMDHSDTRRGVPAAHRRFGAAHERAGGSGPAGDFGADMAILLGDLLLVWSMEMFTTSGIEPLRLAATGPLLEAVRTEVTCGQVLDVTAEAGMTGGGRESGLDLANRIVEYKTARYTVARPAQIGVSLAGGTADLQQAMLTFGSPLGRAFQFRDDLLGVFGDAQVTGKPAGDDIREGKRTTLVAHAIVASTPGDARALETLLGRHDLDDADIASARRIIEASGARASVEADIERAYRQALDALGAASMTHEGRIALTELARQCVQRSS
>NZ_CP015970.1|WP_062820512.1|234380_235298_+|5,10-methylenetetrahydrofolate-reductase
MLSTTSPAETIAELLTRAERPLTSFEFMPPRSEEDVYRLWRATDELVPLRPDFISVTYGANGSRRDRTLRCTQHMVASGLRTVGHLTAVSQSVAELEQTVSDYHDAGVDHILAIRGDMPGGAAEPWVARPDGLANATELVRLVKRVNPGACVGVGAFPDCHPASGDLDLDARILAEKVEAGASFAITQLFFIPEHYTDLVARVRALGCDIPIIPGIMPITSFSQIRRFGELSGTDVPADLVARLSEVAEDRAAVREIGLEAAARLSCRLLDEGAPGLHYYTLNRSRATTELHAMVRDRRPGLWDR
>NZ_CP015970.1|WP_071001076.1|235224_237480_-|AAA-family-ATPase
MTSGSSSTVPADTTVAAEMASEQAHVDRVYAQLRSETEAAKRLARASQEIYHSDRTTWVREEDSTAMYERDAFAYNAARRLAVLDSEHEGLVFGRIDLSDDSEVRHIGRIGVRDADYEPLVIDWRAPAAEAFYRATSTSPMGVVRRRVLRCRDDRVIGIEDDLLDSTKNRDDLPIVGEGALMAALSRARDTRMHSIVATIQAEQDEAIRAPYQGVTTISGGPGTGKTVVALHRAAFLLYSHRARLENGGVLVVGPSSVFMNYIERVLPSLGEDSVTLRAMGELASDVLGLDSDRLDESAAATLKGSLRMIDVIAALAALPLTPDPASLSLRVTIKGEVLILDAKALARTRARILRRNRYNSARQIVETSLLDQLWSKVPPETLSGYELTREDFDEAITSQASYRMFMNAWWPPMTAEQALGRLADPQVVARVATGLSAEDQKVLADSIPTSVDGGRRDWSIADIALLDELVAILGPAPVDLTAEQPVFIEGGEVSELVTVADTLADTRTVDPDDDPQDTFAHVLVDEAQDITPMQWRMLRRRGPQASWTIVGDPAQSAYPFPEETASAVAELTGHAPSRTFRLSKNYRSPAEVFDLAAGVITTVHPDADLPEAVRSTGIRPILRTSSRASLSEDLAATVRTLAGQVEGTIGIICPPSLAQVARDLAAGPLADLSGRVIPLTAMQAKGLEYDAAVVVDPDDLVAEAPGGVRVLYVALTRPTQRLVVTDLSDPTSPAGDHAPWRAALSSHGTD
>NZ_CP015970.1|WP_071001164.1|237712_238927_-|hypothetical-protein
MEVRGEGLIALAASLRLARLGHRVTLVAADPSWRSRARRPLSGELPPVLEVPAAWRDLFGKSGRNMDAELARDGFTLTEAPPVLHRMEKETLALPTERAAQIAAVRTHWSPDVARIWSHLLDRADEAWQARRALGLEYPVAGALRGGDLPRALAGRHLTDGCDDLPALLRAVVGHLGPVAGGTRAGRGGTPLLADLAVPRVFGRWQLTRLDDGSATTLQPLLDALDRRLGARGVEVAAGPARRPDLVIDTEPPRRRFGHDRPFLAPTVRLTRSPDTAPGGRRAERGVEHSVDHTPAGPVLHWSWSEQGQRATLTHDHTRPVRRPDLGRAIDSTAAWRRRPPLQWIRDDGAPVLAASPAAHGGPEPWAQLLTGALAAYLSHERLTGQDVSPHNRAVGADGRLRRH

Crispr_ID: NZ_CP015970_2

• CRISPR_ID: NZ_CP015970_2
• CRISPR_location: 621960-622048
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015970_2

Consensus_repeat	Method
ACCCCCTGCACCCCCGGGCGGGGACT	CRISPRCasFinder

spacers of NZ_CP015970_2

>2.1|621986|37|NZ_CP015970|CRISPRCasFinder
GCGGCGATCCCCGGGTCCGCGTCGCAGGCCAGTGGTG

CRISPR arrays and Neighbor proteins around NZ_CP015970_2

CRISPR arrays

The CRISPR arrays of NZ_CP015970_2

>merge|NZ_CP015970|2|621960-622048|CRISPRCasFinder
ACCCCCTGCACCCCCGGGCGGGGACTGCGGCGATCCCCGGGTCCGCGTCGCAGGCCAGTGGTGACCCCCTGCACCCCCGGGCGGGGACT

>NZ_CP015970|2|2|621960-622048|CRISPRCasFinder
ACCCCCTGCACCCCCGGGCGGGGACT	GCGGCGATCCCCGGGTCCGCGTCGCAGGCCAGTGGTG
ACCCCCTGCACCCCCGGGCGGGGACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062818855.1|618544_619516_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NZ_CP015970.1|WP_015070689.1|619512_620325_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NZ_CP015970.1|WP_062818860.1|627938_628523_-|DoxX-family-membrane-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062818861.1|628727_629393_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|131992
NZ_CP015970.1|WP_062818852.1|613287_615702_+|glycosyl-hydrolase	unknown	unknown	gnl|CDD|185053
NZ_CP015970.1|WP_036936479.1|624173_625622_+|peptidase-S10	unknown	unknown	gnl|CDD|225490
NZ_CP015970.1|WP_071001084.1|609799_612682_+|UPF0182-family-protein	unknown	unknown	gnl|CDD|377101
NZ_CP015970.1|WP_062818857.1|621133_621946_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213224
NZ_CP015970.1|WP_062818853.1|616143_616893_+|M50-family-metallopeptidase	unknown	unknown	gnl|CDD|315961
NZ_CP015970.1|WP_062818859.1|623357_624143_-|histidinol-phosphatase	unknown	unknown	gnl|CDD|273949
NZ_CP015970.1|WP_015070678.1|631547_631799_-|WhiB-family-transcriptional-regulator	unknown	unknown	gnl|CDD|376791
NZ_CP015970.1|WP_015070685.1|625640_626636_-|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl|CDD|206747
NZ_CP015970.1|WP_028700570.1|629389_629647_+|mycothiol-system-anti-sigma-R-factor	unknown	unknown	gnl|CDD|188261
NZ_CP015970.1|WP_036936474.1|609233_609803_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062818856.1|620321_621137_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223521
NZ_CP015970.1|WP_015070679.1|630044_631517_+|histidine-kinase	unknown	unknown	gnl|CDD|378836
NZ_CP015970.1|WP_051281661.1|626632_627946_-|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|235037
NZ_CP015970.1|WP_062818858.1|622134_623325_+|phosphoglycerate-dehydrogenase	unknown	unknown	gnl|CDD|236985
NZ_CP015970.1|WP_041707540.1|612678_613269_+|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NZ_CP015970.1|WP_062818854.1|617048_618548_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173859

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_062818855.1|618544_619516_+|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.46301e-97
NZ_CP015970.1|WP_015070689.1|619512_620325_+|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.85351e-71
NZ_CP015970.1|WP_062818852.1|613287_615702_+|glycosyl-hydrolase	gnl|CDD|185053	PRK15098, PRK15098, beta-glucosidase BglX.	9.67099e-80
NZ_CP015970.1|WP_036936479.1|624173_625622_+|peptidase-S10	gnl|CDD|225490	COG2939, COG2939, Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism].	4.38169e-62
NZ_CP015970.1|WP_071001084.1|609799_612682_+|UPF0182-family-protein	gnl|CDD|377101	pfam03699, UPF0182, Uncharacterized protein family (UPF0182). This family contains uncharacterized integral membrane proteins.	0
NZ_CP015970.1|WP_062818857.1|621133_621946_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213224	cd03257, ABC_NikE_OppD_transporters, ATP-binding cassette domain of nickel/oligopeptides specific transporters. The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.	3.72999e-101
NZ_CP015970.1|WP_062818853.1|616143_616893_+|M50-family-metallopeptidase	gnl|CDD|315961	pfam13398, Peptidase_M50B, Peptidase M50B-like. This is a family of bacterial and plant peptidases in the same family as MEROPS:M50B.	5.6371e-37
NZ_CP015970.1|WP_062818861.1|628727_629393_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|131992	TIGR02947, putative_RNA_polymerase_sigma_factor, RNA polymerase sigma-70 factor, TIGR02947 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and (with the exception of a paralog in Thermobifida fusca YX) one-to-a-genome distribution, to represent a conserved family. This family is restricted to the Actinobacteria and each gene examined is followed by an anti-sigma factor in an apparent operon.	1.68768e-108
NZ_CP015970.1|WP_015070678.1|631547_631799_-|WhiB-family-transcriptional-regulator	gnl|CDD|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	1.76999e-29
NZ_CP015970.1|WP_015070685.1|625640_626636_-|ribosome-small-subunit-dependent-GTPase-A	gnl|CDD|206747	cd01854, YjeQ_EngC, Ribosomal interacting GTPase YjeQ/EngC, a circularly permuted subfamily of the Ras GTPases. YjeQ (YloQ in Bacillus subtilis) is a ribosomal small subunit-dependent GTPase; hence also known as RsgA. YjeQ is a late-stage ribosomal biogenesis factor involved in the 30S subunit maturation, and it represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. All YjeQ family proteins display a unique domain architecture, which includes an N-terminal OB-fold RNA-binding domain, the central permuted GTPase domain, and a zinc knuckle-like C-terminal cysteine domain.	7.3409e-94
NZ_CP015970.1|WP_028700570.1|629389_629647_+|mycothiol-system-anti-sigma-R-factor	gnl|CDD|188261	TIGR02949, putative_anti-sigma_factor, anti-sigma factor, TIGR02949 family. This group of anti-sigma factors are associated in an apparent operon with a family of sigma-70 family sigma factors (TIGR02947). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is restricted to the Actinobacteria. [Transcription, Transcription factors].	6.88943e-18
NZ_CP015970.1|WP_062818859.1|623357_624143_-|histidinol-phosphatase	gnl|CDD|273949	TIGR02067, his_9_HisN, histidinol-phosphatase, inositol monophosphatase family. This subfamily belongs to the inositol monophosphatase family (pfam00459). The members of this family consist of no more than one per species and are found only in species in which histidine is synthesized de novo but no histidinol phosphatase can be found in either of the two described families (TIGR01261, TIGR01856). In at least one species, the member of this family is found near known histidine biosynthesis genes. The role as histidinol-phosphatase wsa first proven in Corynebacterium glutamicum. [Amino acid biosynthesis, Histidine family].	2.90618e-76
NZ_CP015970.1|WP_062818856.1|620321_621137_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	4.56588e-126
NZ_CP015970.1|WP_015070679.1|630044_631517_+|histidine-kinase	gnl|CDD|378836	pfam12282, H_kinase_N, Signal transduction histidine kinase. This domain is found in bacteria. This domain is about 150 amino acids in length. This domain is found associated with pfam07568, pfam08448, pfam02518. This domain has a single completely conserved residue P that may be functionally important. This family is mostly annotated as a histidine kinase involved in signal transduction but there is little published evidence to support this.	7.68993e-53
NZ_CP015970.1|WP_051281661.1|626632_627946_-|3-phosphoshikimate-1-carboxyvinyltransferase	gnl|CDD|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	1.67955e-143
NZ_CP015970.1|WP_062818858.1|622134_623325_+|phosphoglycerate-dehydrogenase	gnl|CDD|236985	PRK11790, PRK11790, phosphoglycerate dehydrogenase.	0
NZ_CP015970.1|WP_041707540.1|612678_613269_+|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	8.17669e-06
NZ_CP015970.1|WP_062818854.1|617048_618548_+|ABC-transporter-substrate-binding-protein	gnl|CDD|173859	cd08494, PBP2_NikA_DppA_OppA_like_6, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0

Protein sequences

>NZ_CP015970.1|WP_062818857.1|621133_621946_+|ABC-transporter-ATP-binding-protein
MNPPERQDPQEPPAELRTEAVSLHLGDRRGGVQALDAVSLEVRPGARLGLVGESGSGKSTLLRVLAGLHRPDSGDVRFRGDSIVGRRPRELAELRANVALVLQDPRSSLDPRMNVGRTITEPLRSPVLRRARSREETSAQLSKVMDEVGLDPESAGRFPHEFSGGQRQRIAIARALITRPAVLLADEPVSALDVSVRAQILNLLLELVAARGLTMVFVSHDLAVVRHLCDEVAVMQEGRIVESGPLASVYRDPQHRVTRDLLAAIPTIRI
>NZ_CP015970.1|WP_062818856.1|620321_621137_+|ABC-transporter-ATP-binding-protein
MSGELLKVEDLRIDFGRRRRVAVDGIGFSVGQGERLGLIGESGSGKSVTALAVMGLLPDNAHISGSIDWRGEELLGRSDKEMSKLRGDQIGMVFQEPMTALDPTMKVGRQVDESLRLHNSSATSARSAVIEMLGQVGLPEPRRVADSYPHQLSGGQRQRALMAMALVNNPDLLICDEPTTALDVTVQARVLATLDEVLDAVGAACLFISHDLGVVSQVCDHIMVMRHGELVERGATAEVLRAPEHPYTRRLLSAARLDLVEPGQMIALEDA
>NZ_CP015970.1|WP_015070689.1|619512_620325_+|ABC-transporter-permease
MRRAGLTIGTTLVGLIVIAALVSLVWTPYDPNLVVPAERLQGPSLRHLLGTDGFGSDIASRLLVGARTCLLVGIVSVVIAAGIGVPWGMASAMLRRPWSRVSARASDLLYAFPALLLAIILAAAVGGSTLTGMIAIGISTVPVFARITRTASWQVLSQDYVLAARSSGIGWLAIARTHVLPNIAPLIGVQASVAYGMAILAEAALSYLGLATPATVPTWGRMLRDAQAYLFNSPAQTLWPGLAIAAAVMGFTLLGDGLRDFLDPRLRELR
>NZ_CP015970.1|WP_062818855.1|618544_619516_+|ABC-transporter-permease
MTPLRRLLRSLAELIISLLVASLIVYGLLNLLPGDVAQVMLGTNADPAAAAKLRSQLGLDRPFLVRYGDWMTGLLTGNLGSSVVSGEAIGPEIASRLAVTGWLVGLAMLLAVLACLPTGIYAAVHRRRARGFAVSAASQILMSVPAFLAGILLILLFSVTLGWLPAGSYVPLTHDPADWLRHIILPVCALALVQAAVLSRYVRSAFIDVLADDHLRTARAVGWRLWPALIRHGLRNASISLVTVLGLQLSTLLVGAIVVEQVFVIPGLGSYLLDAVSMRDLVVVSDVVMVLVALVLLITFLVDLLVVLIDPRLRVTADVEEDQ
>NZ_CP015970.1|WP_062818854.1|617048_618548_+|ABC-transporter-substrate-binding-protein
MRAGLRVAAAACALALVLTGLVGCSREDSSDTVVLGATAAPPTLDLTANNAAAIPQVLLYNVYETLLRVDDDGNLKPLLARSWSRSTDGLHYTFHLDDRARFASGARVDAAAVADSLNRMRSKDTIEVVSAQLAAVTAITARGDDTVDITLKQRDNFLLYNLAGVAGIIIDPAHRTDLARHPAGSGPYRVTGFSPGESVDLEASPAAWHERPQVARVRFSYYTDATSQTAALLSGDLDVITDLTTPQAVSRFSDPQRFTVTRGTTNGEVVLGLNNSTRALSDRRVRQAILMAIDRRGLLDVVWNGQGTLIGSMVPPTDSWYTDLSKRWPYDPAAARRLLAQAGYADGLRLRLRVPSLPYATASTRVITDMLKRIGITVVTDELEFPARWLDVVYTRADYDMTVVAHVEPHDIVNWANPDYYWRYRNPTFTRLIGQAASGPADQSTARMRQASEILADDAAGDFLYLMPKITVAKAGITGLQRNAASLSFDLTSLRRAGR
>NZ_CP015970.1|WP_062818853.1|616143_616893_+|M50-family-metallopeptidase
MQWSEIFDAVASRLNSNFAVGDPVAGRWLLAGIVIAAASILIVPLWRLVRPAVTLVHELGHAAVGVLSGRRFTGFVISPDMSGHTTTVGRTSGPGMVLTAAAGYPMPAIIGAGAIQAALAGRAGVVLLLILITLVVALFHARSLFTGGSLVLLIGLDGYLWWAGDRPWAAASVVWLGAVLLIGAWRHLAAVAFHGDRSQDPGLLASATRVPTAVWNLGFMLILAACTWWAWRVLEIPFGLTVEALLGGR
>NZ_CP015970.1|WP_062818852.1|613287_615702_+|glycosyl-hydrolase
MTELTDLPQYLLIRLLSGADDWRTVAAGEVGVRSLHLSDGPHGLRVPDVKGGSLPATCFPTAVTLGASWDRELAEEVGGALAVEAGALGVDVVLGPGMNIKRHPLGGRNFEYLSEDPVVSGELAAAMVRGIQGRGVAACVKHFAVNNQETMRLCVDAVVDERTLHEIYLAAFETVVRTARPAAVMASYNEINGTAATTNRSLITEVLRGRWGFDGLVMSDWGAVWDRVAALEAGLDLEMPSSAGAFDRSVAAALDSGRLGLDAVLTSVSRLVGLQNRISPPRIDRIPADEHDALARRAATAGTVLAANDGILPLAAGSKVAVIGAFAARPRYQGSGSSQVNPTRVTGLLEALGAKDVEVGYARGYDPEEQRTDAVLVAEAAELAAASDVAVVVTGPPEELESEGYDRTGMDLPAQHDALVRAVLAANPRTVIVVCSGSPVALPWADRAAAVVLAGLGGQAGGGALADVLVGDAEPGGRLAETWPHDLSEVASDPWFPGTGAMVQYREGPAIGYRHTATNGVEPAFCFGHGLSYTRFDWRDAVLTEPWIVAGDGLSVDVEVANVGDRAGSDVVQVYLSDRTGVVSRPRRWLAGFAKVRLEAGQSRRVQVAVGARELGFWDVEKHDWVVPSGHFDVELGRSAHDIVATLDLVVSEGADHAPERAWTPLIAEDDEAFAARLGHEIPRPAATTPFTARSTLGQVRHTPLGGLLHAAAMRRLAAGVRDPRFRRMMEHTVDELPLRNLPSMTKGLVPLESVSLIVDVLNGAPDEILRRSFGGALGLGRGVVDAGRGLWGELSSRIGRLGR
>NZ_CP015970.1|WP_041707540.1|612678_613269_+|universal-stress-protein
MNQIHVPSSDQPLVVSVHPGVPELLISTAVGWARAFGSSLCMAYVDESRVTIEGYEDGSVRHTALVPDDERTPWRARDSQLREALASVMAGYPDVDWQFRYRAGNPDRELSHLAHTLDAAAIIVGTRAPGFRWTAKEWFDGSVALQLSRRQTRPVVLVPLSTQDWERPVAVRPPEPPETTGRADDRPEEIGPDRVD
>NZ_CP015970.1|WP_071001084.1|609799_612682_+|UPF0182-family-protein
MSSHSASAPRRRPAQRPRRRHRIWAIVLVVLTVAVLAWLLASNVVTDLLWYSAIGYRKVFLTRLLSGLGLFLLGLVVVGGSTALNMAIATRLRPSEAQGPGNYQELLLRRKVLAILLPSLFVGLLAGTSTASQTSTMLAWWNRTPFGVKDPYHGLDVSFYTFTYPWLRMLVNIGLAAVVLSLLGAFVVHLSMGAVTVLAPSILSPGGPARQKRQRTHLFTSRAQAHLSVLAAIGLVVFAASSLLGRYGLEVSQSSLFTGIGYTEDHYRGTARLVVAGISLVVAVLFVVNAKLRRWGVPGIGIILMLVATLLVQGIYPALMQRFSVTPDAPDKERPYMINNIAATRAAYGIDNTTISDYSAVTSASSGQLKADAEAVPSIRLMDPAVIGPTFEQLQQVRGFYSFPKTLDVDRYKVDGTMTDTVVAAREIDLNGITDKSWNNLHTVYTHGNGLVAAYGNKRQTSGEPEWLARDIPTTGKLPEKQSRIYYGERSSQYAVVGARPGAAPVELDTPGGGQGAQGAERKNTYDGKGGVSVSNPLVRAMYATKFADINLLLSDRVHSNSRILYDRTPLDRVAKVAPWLKVDSDALPTLVDGRLVWVVDGYTTSANYPNSNRVDLRDASSDSTSQTRQAQPSEPVNYIRNSVKAVVDAYDGSVTLYAWDTKDPILRTWEKAFPGTVHPRSQMSADLLSHVRYPQDLFKVQRQILGRYHTTNPDTWYQRNDVWEAPDDPVRTGQGLEPPYYLTIRWPGETNPVFRSTAAMVPNKRQNLGAYISVGSDATKSDYGKIRVLRMSSSTQIDGPNQTASAIIADTNVSSKLLPYQNRGSATATLGNLLTLPVGGGLLYVQPIYAQRQTGSGGYPILRFVAVRFGTHVGIGDTLQDALDQVFQGDAGADTNENQSGSSSTATPPTSQKAKDLLTQAQGAFTAADKALKSGDLATYQKQIAQARKLVSQALGQVK
>NZ_CP015970.1|WP_036936474.1|609233_609803_+|hypothetical-protein
MTPADNLHDSAATDALAAALTEIDRFLGRDGWGLPARLFALVPTVDLMAAEPSLADRLSAGSPDSLSSIEQEDFHAGDHIESTLAGIVWPDAVTGAAVTLERVFLPADEEAGVPDDPQAAAEYVASHPRRQDLRVVAGATRGGAHFAVARVLDHPDDLLGAENLVPGLEAALLGTFDGQGALDDQMETK
>NZ_CP015970.1|WP_062818858.1|622134_623325_+|phosphoglycerate-dehydrogenase
MKALLLENIHDEAVRTLRSEGYEVERLSKALGEDELIEALEGVDLLGVRSRTNITRKVVEARGDSLTAVGAFCIGTNQLDLDALSGAGVAAFNAPYSNTRSVVELVLGEIIALARRLGDRNTQMHHGVWRKSAAGSHEIRGRKLGIVGYGNIGSQLSVVAEAMGMRVWFYDVADKLPLGNARKCDSLEELLQTVETVSIHVDGRPENRGMIGAAEFEAMRPRTLFLNLSRGGVVDVDALAENLRTGHIAGAAVDVFPTEPKSGDEPFVSPLTQLDNVVLTPHVGGSTQEAQVDIGRYVANKLIDYAENASTSMSVNLPDIAPAPANGTRIGHLHRNVPGVMATINRLIADYGGNVTYQALATRDDLGYAVLDIAETDRGLLAEVAHLDATIRARVL
>NZ_CP015970.1|WP_062818859.1|623357_624143_-|histidinol-phosphatase
MTDFTDDLRLAHVMADDADSITMARFQAADLRISAKPDHTEVTDADLAVEDSVRRTLGRSRSRDAVHGEERADTGQGPRRWIIDPIDGTANFLRGVPVWATLIALSIENRVVASVVSAPALQRRWWAAEGIGAWTGKSLVKARPIHVSAVSDLNDAFLSYSSLHGWVEEGRGRGFGELMRSVWRTRAFGDFWSYMMVAEGTVDLACEPELSLHDMAALDVIVREAGGRFTGLDGVDGPWSGNALASNGLLHDEALEMVAGD
>NZ_CP015970.1|WP_036936479.1|624173_625622_+|peptidase-S10
MPEQSAEAPEPTPAEPVDELVTTHHTLATPDGPLEYTATTGVVAVPTRQTPGESPRSADTGLIGVTAYTLDGGGPARPLTFVFNGGPGSPSMWLHMGLVGPRVVDAGTPDSPATPPFTIVDNPHTLLRATDIVVIDAMSTGYSRAADGQKAAQWHGWKADVEQVAELIRIWCTRNDRWTSPLHLLGESYGTIRAVSVAERLQSAYGMYLAGIVLVSSVLDFGSQDFDNARWDEACIHFLPTYAAIAWYHGRHPGRSLEEVLGEAEEFADGPYRLALGKGRRLPAEDRARVEDRLARLTGLPVDYIRRADLRVEHLRFCTELLRDQGLVVGRIDGRFTGPARAGTDEMMDTDASDDATRGAFTAATQHYLRAELGSPSEREYVVSADLWKDWNYREFQGRPVNVTDKLERVMRAQPGLRVRIEYGRYDLATPYFAAQDMVDHLHLPEAAFNRIEHAYFETGHMPYLSMREREADEIVAFLTRG
>NZ_CP015970.1|WP_015070685.1|625640_626636_-|ribosome-small-subunit-dependent-GTPase-A
MSPRRLASSGVDTFDEDGYERPRRRTRPRTKNRPDYSGLPVGTVLSIDRGRYRCRVEGQDVTAAKARGLGRKGVIVGDRVRLDGDISGDEGSLARIAETMRRRTVLRRTADDTDPYERPVVANADQILIVTALADPPPRIGMIDRILVASYEAGTDPVLCLTKADLASPRELTELYSPLGVPVVTSSPGADLGPIRERLAGLTTVLVGHSGVGKSTLINALIPGVDRRTGQVNEVTGRGRHTSTSAQALELPDGGWVIDTPGVRSFGLSHVSSDHVLSAFPDLEAFTVDCPRGCRHTAEDPQCGLDEALRAGRIPALRLASFRRLDAARTR
>NZ_CP015970.1|WP_051281661.1|626632_627946_-|3-phosphoshikimate-1-carboxyvinyltransferase
MTEPQHSTAQAGAGPWPAPAADGPLDSLTVVPGSKSQTNRALLLAGLSSGPSTLDGVLASRDTMLMRDGLTALGVDLQDLGPGRVRVSPPPTLHASPAPIDCGLAGTVMRFLPAAAAIAPGRTRFTGDAAASARPVAPVLDGLRQLGARVDGDRLPFALEAPARLPGRRVTIDSSGSSQFISALLLSAARYPEGIDLRHRGGSVPSAPHIAMTVAMLAERGVVVDQDDEDHWRVEPGPIRPLDAVVEPDLTNAAVFLAAAMAVGGTARVPGWPERTTQPGHLFLDVARTLGADARVADGTAVVTGAGPLHGAELDLHAASELTPVVAALAALAHGRTVISGVAHIRGHETDRLAALETELSRVGARIAQTDDGLEILGEGPRALHPARMRTYADHRMAHAGALIGLAVPGVSLDDVSCTSKTMPDFPSMWADLAGSR
>NZ_CP015970.1|WP_062818860.1|627938_628523_-|DoxX-family-membrane-protein
MSIIRGLGRTLFASYFVVKGTNAALKPDTFVEDAEPVADKLLPLVQRSLPASVSSHIPEDTRSLVRLAGAVQAVGGVAMGTGLGRRAGAALVAASMVPHVVASFPEKTLPKEDRAGARSVLLRNVALLGGALMASRDTAGQPSIAWRLAQRRKALGESAENTGKQIRRKAKDGRRSIAKAQKKAEKKVRDQIGD
>NZ_CP015970.1|WP_062818861.1|628727_629393_+|sigma-70-family-RNA-polymerase-sigma-factor
MTIPSSGAGEAHGRDEAEETDQQRVARFERDAMEYLDQLYGAALRMTRNAADAEDVVQETYAKAFASFKQFRPGTNLKAWLFRILTNTYINTYRKAQRRPQTSDDENVEDWQIARAASHEATGLRSAEVEALDAMPDTQVVRALDSLSEDFREVVTLADIEGFSYKEIAQIMGTPIGTVMSRLNRARKQLRGQLVDVAGARGIGPKAGKVDEETLGQEVHS
>NZ_CP015970.1|WP_028700570.1|629389_629647_+|mycothiol-system-anti-sigma-R-factor
MIDDSNPECAEKACGWALDHLQEFLHGELSDEAADAFRHHLTACESCMDEADMEAAVSRALRRCQQPVHASIELRMRIVGLTLDS
>NZ_CP015970.1|WP_015070679.1|630044_631517_+|histidine-kinase
MPALDRFMVSRSRLSKNDVGWLSQLVEDWQILADMSFSDLILWIPDEDPNIFWAAAQIRPDTGPTALEEDVVGESVSYDDENLVTEAFMSAEMCETSNNKLSAGIPVDVWAIPVIRHDEVIAVVERHTNQMGVRAPGSTEDNYLEIAGILSEMLHHGSFPIFPNHDRALAPRVTDGVIRVATTGMVTYASPNGLSAFRKLGLSGDLDGEYLIPVVRELCPNLRDVGQTVGMDLDGKSLRETDIENSEATLRARVMPLRTWLDDFEVPAGTLILVRDLTELRSRDRQLVTKDATIREIHHRVKNNLQTVAALLRLQSRRMTNEDAKLALKQAMGRVSAIAVVHEILSQNFEEEVDFDEVADRILRMVGDVAASSGRVVARREGSFGKVHADAATALSLATTELCQNAIEHSLGSSSGEVVVRPHRENGLLVVDIVNDGKPLPEGFSLANHRKSLGLSIVTTLVEDLGGTFTLQNNPGDKGTCARITVETQD
>NZ_CP015970.1|WP_015070678.1|631547_631799_-|WhiB-family-transcriptional-regulator
MDWRHKAACLDEDPELFFPIGNTGPALAQIAEAKKVCARCDVRAECLAWALEAGQDHGVWGGMSEDERRAIKRRQSRSRVRKA

Crispr_ID: NZ_CP015970_3

• CRISPR_ID: NZ_CP015970_3
• CRISPR_location: 1116174-1116281
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015970_3

Consensus_repeat	Method
GGGGGGCAACCCCCCTGCACCCCCTGGCG	CRISPRCasFinder

spacers of NZ_CP015970_3

>3.1|1116203|50|NZ_CP015970|CRISPRCasFinder
GCAACCTCGCAGATCCCACGACCGCGTCGCAGGCCGGACAGCGCACCCTA

CRISPR arrays and Neighbor proteins around NZ_CP015970_3

CRISPR arrays

The CRISPR arrays of NZ_CP015970_3

>merge|NZ_CP015970|3|1116174-1116281|CRISPRCasFinder
GGGGGGCAACCCCCCTGCACCCCCTGGCGGCAACCTCGCAGATCCCACGACCGCGTCGCAGGCCGGACAGCGCACCCTAGGGGGGCAACCCCCCTGCACCCCCTGGCG

>NZ_CP015970|3|3|1116174-1116281|CRISPRCasFinder
GGGGGGCAACCCCCCTGCACCCCCTGGCG	GCAACCTCGCAGATCCCACGACCGCGTCGCAGGCCGGACAGCGCACCCTA
GGGGGGCAACCCCCCTGCACCCCCTGGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062819135.1|1104832_1105423_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062819138.1|1119233_1120247_-|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380488
NZ_CP015970.1|WP_015070791.1|1115210_1116170_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|223739
NZ_CP015970.1|WP_082815899.1|1111458_1111941_-|SseB-family-protein	unknown	unknown	gnl|CDD|377787
NZ_CP015970.1|WP_015070787.1|1112547_1113408_-|ATP-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234781
NZ_CP015970.1|WP_157773930.1|1104621_1104783_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062819139.1|1120372_1121884_-|L-arabinose-isomerase	unknown	unknown	gnl|CDD|179503
NZ_CP015970.1|WP_015070788.1|1113419_1113686_-|phosphoribosyl-ATP-diphosphatase	unknown	unknown	gnl|CDD|212154
NZ_CP015970.1|WP_126132935.1|1110860_1111163_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062819143.1|1130704_1131763_+|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP015970.1|WP_015070790.1|1114547_1115129_-|DUF3090-domain-containing-protein	unknown	unknown	gnl|CDD|378626
NZ_CP015970.1|WP_015070789.1|1113743_1114418_-|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl|CDD|377432
NZ_CP015970.1|WP_082815900.1|1128765_1130664_+|glycoside-hydrolase-family-127-protein	unknown	unknown	gnl|CDD|226063
NZ_CP015970.1|WP_015070801.1|1124508_1125522_-|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP015970.1|WP_041707546.1|1127938_1128757_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP015970.1|WP_062819141.1|1123001_1124402_+|sugar-porter-family-MFS-transporter	unknown	unknown	gnl|CDD|340917
NZ_CP015970.1|WP_062819137.1|1117581_1118934_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|181163
NZ_CP015970.1|WP_015070805.1|1131774_1132674_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP015970.1|WP_062819140.1|1121943_1122660_-|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl|CDD|235829
NZ_CP015970.1|WP_062819136.1|1111977_1112499_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_062819138.1|1119233_1120247_-|LacI-family-transcriptional-regulator	gnl|CDD|380488	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of LacI is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	2.28949e-112
NZ_CP015970.1|WP_082815899.1|1111458_1111941_-|SseB-family-protein	gnl|CDD|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	2.15737e-13
NZ_CP015970.1|WP_015070791.1|1115210_1116170_+|aldo/keto-reductase	gnl|CDD|223739	COG0667, Tas, Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion].	1.28892e-97
NZ_CP015970.1|WP_015070787.1|1112547_1113408_-|ATP-phosphoribosyltransferase	gnl|CDD|234781	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed.	1.82391e-138
NZ_CP015970.1|WP_062819139.1|1120372_1121884_-|L-arabinose-isomerase	gnl|CDD|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP015970.1|WP_015070788.1|1113419_1113686_-|phosphoribosyl-ATP-diphosphatase	gnl|CDD|212154	cd11547, NTP-PPase_HisE, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in Mycobacterium tuberculosis phosphoribosyl-ATP pyrophosphohydrolase (HisE or PRATP-PH) and its bacterial homologs. This family includes M. tuberculosis phosphoribosyl-ATP pyrophosphohydrolase (HisE or PRATP-PH) and its bacterial homologs. M. tuberculosis HisE is encoded by the hisE gene, which is a separate gene presenting in many bacteria and archaea but is fused to hisI in other bacteria, fungi and plants. HisE is responsible for the second step in the histidine-biosynthetic pathway. It can irreversibly hydrolyze phosphoribosyl-ATP (PRATP) to phosphoribosyl-AMP (PRAMP) and pyrophosphate. HisE dimerizes into a four alpha-helix bundle, forming two inferred PRATP active sites on the outer faces. M. tuberculosis HisE has been found to be essential for growth in vitro, thus making it a potential drug target for tuberculosis.	3.12418e-40
NZ_CP015970.1|WP_062819143.1|1130704_1131763_+|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	6.18221e-98
NZ_CP015970.1|WP_015070790.1|1114547_1115129_-|DUF3090-domain-containing-protein	gnl|CDD|378626	pfam11290, DUF3090, Protein of unknown function (DUF3090). This family of proteins with unknown function appears to be restricted to Actinobacteria.	1.47393e-71
NZ_CP015970.1|WP_015070789.1|1113743_1114418_-|nicotinamide-mononucleotide-transporter	gnl|CDD|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	2.57184e-44
NZ_CP015970.1|WP_015070801.1|1124508_1125522_-|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.37913e-97
NZ_CP015970.1|WP_041707546.1|1127938_1128757_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.59303e-77
NZ_CP015970.1|WP_082815900.1|1128765_1130664_+|glycoside-hydrolase-family-127-protein	gnl|CDD|226063	COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown].	1.59964e-115
NZ_CP015970.1|WP_062819137.1|1117581_1118934_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|181163	PRK07906, PRK07906, hypothetical protein; Provisional.	0
NZ_CP015970.1|WP_015070805.1|1131774_1132674_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.33603e-73
NZ_CP015970.1|WP_062819140.1|1121943_1122660_-|L-ribulose-5-phosphate-4-epimerase	gnl|CDD|235829	PRK06557, PRK06557, L-ribulose-5-phosphate 4-epimerase; Validated.	2.48893e-147
NZ_CP015970.1|WP_062819141.1|1123001_1124402_+|sugar-porter-family-MFS-transporter	gnl|CDD|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.63896e-134

Protein sequences

>NZ_CP015970.1|WP_015070791.1|1115210_1116170_+|aldo/keto-reductase
MLARTVGASGLKVSRMGLGTLTWGGQTDTRDARTMLRSFVEAGGNLVDTAPAYGSGAAEKLIGRVIHSDLDRDDLVIATKAGFTVNGENRVVDTSRAAMLRDLEGSLRRLHTDHVDLWQVHAWGDAPLEETCDALDHAVRSGMARYVGVSNFVGWQSATAATWQRALRSRIPIISNQVEYSLLARRAEIEVMPSAHHHRMGVLAWSALGRGVLTGRYRTGTPKDSRGANDQLSWFVEPYLAAKSRAVVEAVAKAAQGLGVTTAQVALSWVRDAPQVASALVGARTPEQLDELLATDDEQLPAEITAALDDITGGANLMR
>NZ_CP015970.1|WP_015070790.1|1114547_1115129_-|DUF3090-domain-containing-protein
MARLTHRYLRPDRFVCGTVGRPGERTFFIQTRQDGQITSVRCDKEQLQVLTTHLARILDDLARLAAGGILVPGPVDEPVDDEPLDMPLEEEFTAGAIAIAWDSAAGRLVVEVFAISDDEMMEADPQLLLAASPQDAPDSLEVHLSPAQARDFVARGQLVISSGRPACPFCGQPISGSGHICPRANGYRRPLFL
>NZ_CP015970.1|WP_015070789.1|1113743_1114418_-|nicotinamide-mononucleotide-transporter
MGDVIMRFLNAQLDIGLGRPVLWREIIGNIFGLASALGGARRRIWAWPVGIVGNVLLFTVFLGGVFHTPQDLNLWGQAGRQVFFLITSAYGWVQWAAYRRSHRSSGGAAVAPRWATPKERMATAAAAVVMLIVFYIVLKALGSWGPASDSWILTGSILATFGMARGWNEFWFIWIAVDLVGVPLLLSAHYYPSGLMYIFYGGFCLYGFFTWWRLRDQDRSVDIP
>NZ_CP015970.1|WP_015070788.1|1113419_1113686_-|phosphoribosyl-ATP-diphosphatase
MSKTFEELFAELSRKAAERPEGSGTVAELDRGVHAIGKKIVEEASEVWIAAEYEGNERTAEEISQELYHLQVMMVRLGIGLEDVYKYL
>NZ_CP015970.1|WP_015070787.1|1112547_1113408_-|ATP-phosphoribosyltransferase
MSGQNVLRIAVPNKGALSEAAASLLSEAGYRQRTDRKDLRLLDEANGVEFFYLRPRDIAIYVGEGTLDLGITGRDLLLDSMAQAVEVRGLGFGRSRFRFAAPAGRHNTVEGLAGRRIATSYPGLLRSYLDERGIDAHLIHLDGAVESSIGLGVADAIADVVETGTTLRKAGLEIFGEVILESEGVLIRRHGFEAGSAYEHFMKRIEGVQVARSYVMLDYDVPEANLAAASDLTPGLEAPTVSPLSRQGWYAVRAMVPRGQVQTLMDQLWDAGARAILSTDIAACRI
>NZ_CP015970.1|WP_062819136.1|1111977_1112499_+|hypothetical-protein
MADSTLTIIVSVVLIALPLLWGVLHWARRRSVRSMVRSIGLALVPAGLWILGVMGMVTQWGRQAVDWVRATTMDTTRWVGVAIAGVGVIAMITGSFVAPVTRQQARERRSGSRETTSGGSAKQVGPAKKPVQPPASKAAQKPGGKKQAGNPDKAGFTDEDRELMELLKERGID
>NZ_CP015970.1|WP_082815899.1|1111458_1111941_-|SseB-family-protein
MVSLLKPGGDLGDADEPTRAAMAAATTREGYLDAVVAMCSSRLLMPVMSPGASAPEGSTQVTELGAAVLTNERGESALLCFTGIDSLQAWDARARPVPGTLDDLAATVEEAGASSLLVDVAGPVPMVIGPDLVVQLSRGRRLVRLSDGYGWLEVTPGDQV
>NZ_CP015970.1|WP_126132935.1|1110860_1111163_+|hypothetical-protein
MKKYHHHTPTPRKAHEDAASGDHIKESKTLTPTNLTKKSSDPSESIKGINKQINRHTPSVHQQNPIDYKKDTLLSSQASHTHRSTNPKNQASHLGATTPS
>NZ_CP015970.1|WP_062819135.1|1104832_1105423_+|hypothetical-protein
MLLDNKLRLGAEELNRIYADQYREADAMWYRIAAASDADFSRKVARTHLMITGVNPLRAMRLMARSVRLGRLLLEMEPDHIDVGATHVTEIMGMYGRPTRMKASLGVEAPIPLSPDHPRRLIGGSHLAGDRNLVNAIAVHQARPVRGGLDILAAACFPDATPAELVDGHSIHMAIEFSNLFRIGLGVQALQPSASA
>NZ_CP015970.1|WP_157773930.1|1104621_1104783_+|hypothetical-protein
MGRGTRSPVTIRVDAGGREYSQDELDSIYAQRSYFTLHEMRRLGGDPPRSEVP
>NZ_CP015970.1|WP_062819137.1|1117581_1118934_-|M20/M25/M40-family-metallo-hydrolase
MDQPIDSEVRAADSPDAEVVPICQELVRIDSSNYGPSDARGETEVARLVAGLLSEIGVRSRIYESEPGRATLVAEWAPEGTDMSRPALLLHGHSDVVPAVADDWSIDPFSGELRDGCLWGRGALDMKGYLAMVLSAIRARHRRGQPPSRPIRFILFADEEGSGTLGSTWLGAHHPEAFDGVTEAISEVGGFSVTTPGGQRAYVVQAAEKGLWWFRMTATGSAGHGSMRNRDNAVSRLAEALGRISGYAWPDLHHPVQEEFLSRFEQLWGIGVDHDRLEESLAALGPLSRMVAACSANTVTPTVLSAGYKVNVIPTSASAELDARFIPGHEQEMIDTIKGLAGPGIEFETISHKPSAEAPFEGPAVDAIRSALAVEDPGAVVLPYLNSAGTDAKGFARLPDGWVINCYGCTPLRLPPDFDFISLFHGVDERVPLDTLAFGARVVDHILQEA
>NZ_CP015970.1|WP_062819138.1|1119233_1120247_-|LacI-family-transcriptional-regulator
MSETSRPPGMMDVARLAGVSHQTVSRVLNNADSVRPATREKVRRAIAELGYRRNLSARALVTNRTRVIGVVVARGGYYGPGSTSSAIQTAARGRGYATIVASLRDGSPGELAAVVDMLTDHGVEGITAIAPQLGFVEGLRKVARSVPIVVVADGFEVSEGMHAVSVDQRHGARLATQHLIGLGHRRIAHISGPDDWFDSRERVIGWREALQDAGLEVPEVMVGDWSAESGYAMGGRLLEEGLPDAVFSSNDTMALGLLACLADLGIRVPDDISLVGYDDANGAAFFQPPLTTIRQPFEELGARCVEVLLEAIEGHEPEPQRIRPSLRVRRSCRRHQN
>NZ_CP015970.1|WP_062819139.1|1120372_1121884_-|L-arabinose-isomerase
MINNPFEAKEIWFFTGSQDLYGPEVLDQVAAQSKEIAAQIDGASTVPVKIVWKPVLKDREAIRTAALEANADDACVGVIAWMHTFSPAKMWILGMDAFTKPLLQLHTQYAEKLPYATLDMDYMNLNQSAHGDREFGYLLTRLGKNRRIVVGHASHPDTALRIGTWARAATAWNALHHMKLARFGDNMRNVAVTEGDKTEAELRLGVSVNTWSVNDLVEVVDAVEESSIDELVATYDAQYDVAEELRPGGAARESLRYGARIELGLRKFLDDGGFEAFSTNFEDLGGLRQLPGLAVQRLMADGYGFGAEGDWKTAVLVRIAKIMGYGLDGGASLMEDYCYEFTPGKEKILGAHMLEICPSLTGKKPSLEIHPLDIGGREDPVRLVFDADPADGLVVALSDMRERFRLTANIVKIVGPDEPLPNLPVARAVWEPAPSFQTSTECWLTSGGAHHTVMTTNTDREMWEDLADIADIELALIDEDTTVRGFAKERLLETAIHRLNGGR
>NZ_CP015970.1|WP_062819140.1|1121943_1122660_-|L-ribulose-5-phosphate-4-epimerase
MTIHLSELDAGTRALVAQTRQTVSDLHAELPRNNLVVWTAGNVSQRVPGTELFVIKPSGVSYDELTADAMVVCTLDGKKIDDGTPEHLQPSSDTAAHAYVYRHMPEVGGVVHTHSPYATAWAARREPVPCVLTMMGDEFGGEIPVGPFALIGDDSIGRGIVETLSHSNSRAVLMANHGPFTIGKDGRDAVKAAVMCEEVAKTVHFARQLGEPVPIPADDVAHLFDRYQNVYGQHDEDA
>NZ_CP015970.1|WP_062819141.1|1123001_1124402_+|sugar-porter-family-MFS-transporter
MTSASSDKKISSKFIYFFGSFGGILFGYDIGVMTGALPFLQVDWPSIRPDSFAAGAATSSVMFGAIFGGALAGQLADRLGRRRMILISALVFVVGSILSGVSPYNGLVFLICARIILGLAVGAASALVPAYMSEMAPARLRGSLSGINQTMIVSGMLISYVVDFLLKDLPTSWGWRLMLALAAVPALILFLGVLNLPESPRYLVRRGLIPQARRVLGYIRRPEDIDAEIADIQRTAEIEEQAAEKTSWSSLFNSKYRYLVIAGVGVAAFQQFQGANAIFYYIPQIVGKAGNSAATDALFWPIINGIILVVGSLVYIAIAEKFNRRTLLTVGGTVMGLSFLLPSLIHAVMPTAPGMLIVVFLCIYVAFYSFTWAPLTWVLVGEVFPLAIRGRASGLASSFNWIGSFAVGLLFPVMAKAMPQAAVFAIFGVICILGVLFVRFRVPETRGHTLEEIEAQGTSHAKKAGV
>NZ_CP015970.1|WP_015070801.1|1124508_1125522_-|LacI-family-transcriptional-regulator
MTAKARGATLGDVAKLAGVSIATASKALNGRAQVRDSTREKVFRAASALDFVPNALARGLLFGQSGTVGLLTSDLEGRFSLPIMMGAEDAFGAGSTSVFLCDARGDPIREQHQLKALLSRQVDGLIVVGARPDPREPLSGDASVPVVYAYSPSTDPQDCSVTSDNVESGRLAAEHLVAIGRGRIGIITGDPSYGAAHDRVEGALEALARAGVTPVAEPLFGSWSEGWGRGAARALLDQHPDVDGVICGSDQIARGAVDALREEGRSIPGDVAVVGHDNWEILSTGSRPPLTTIDMNLQELGRRAANLLFDAIGGNPSHGVEKLPCRLVVRGSTLSTV
>NZ_CP015970.1|WP_041707546.1|1127938_1128757_+|carbohydrate-ABC-transporter-permease
MKPSATSRTVYYAVTALMAIVFILPLVWAVVSSISPNPGTAQTSGFGLGNYGTMLKYGLGIPVYLKNSIIVSVSATVFTLIVAATGGYAFARFTFVGKNVLFTVVLSVMMVPYAALLIPLLVWMKQLHLQNSLIGVALVLTLFQLPFSIFMMRNSFAAIPRELEEAAYMDGCGSFAAFLRVMLPSVRPGLVTVGLFTFLAAWNDFMVSLYLLSTEKAPLPLALVNMRQQTMGVIDYGSTTAGVVVLTLPAVVLFLALQRYYIQGFTSGAVKG
>NZ_CP015970.1|WP_082815900.1|1128765_1130664_+|glycoside-hydrolase-family-127-protein
MMTSTCTPVLPGSGDLHPLGIHDVDITDGFWHRMQTTNRDAIVPHIAEWEERTGWLHNVDAVADGSIGGCRTGREFADSEVYKFLESLAWQIGDDDSSPLTELFDSIVARVAGAQCEDGYLNTCFGSPGQRPRYSDLEWGHELYCYGHLIQAGVARLRSGHHDALVDVALRAADHICRTFGPGGLERVCGHPEIEVALVELYRATGERRYLDQARLFLERRGHHTLADIEFGRRYFLDDTPIRRASVLRGHAVRALYLASGAIDAAAETGDSELLGIVEGQYRSALARRTYLTGGMGSHHQDEAFGDDFELPPDRAYCETCAGIGSVMVAWRLLLATGDISLADVIERTLYNVVAASPRLDGRAFFYTNPLHQRVRAEEVADDRPSPRAEAQLRAPWFEVSCCPTNVSRTLAQLGAYLATTSADGLQLLQYAAGRISTALPGGGRVTVRVDTHYPDDGRIAVTVEQAPAEPWQLTLGIPRWAGGATVTVGGQTRTAEAPAHVVSGLVAGGTVVLDLPMAPRFTFPDPRIDAVRGSVAVELGPLVLCAESVDLPGDLALDAVAVDAGAAPVAADDGAEVRAMRVPVDDLATSAYGPDRPSGGRGEPRVLRLVPYYRWANRGPSTMRVWLPTLP
>NZ_CP015970.1|WP_062819143.1|1130704_1131763_+|LacI-family-transcriptional-regulator
MNERPPATTGTPGPGRATVRDVAARAGVSPKTVSNVITGKVYVRPETRRRVDAALAELDYVPNLSARGLRNGRSGVIALALPDLATPYSAEVAHHFVEAAHSRGWGVQIEETRGRPDREQKLVSRALSRLVDGLILNPVLPDELSLSADALLPPTVLIGEVLDLPFDQVRVDPETAAYDMTSHLIGLGHRRIALLGSPDRSTAFTATLRTQGYRRALVDAGLRTDPRLEIACDDWTPRGGAGAVDSFIDDLPLPDAIFCLTDSLALGAISALWRRGIRVPRGISVAGFDDIADGEFAAPPLTTVSFDKDEFAARALDRLAERITRASLPVRTIRVPHRIVARQSTAPRATTR
>NZ_CP015970.1|WP_015070805.1|1131774_1132674_-|carbohydrate-ABC-transporter-permease
MSTSVMTRKSPVTSAAPPASAARAPMSTRTFNAIALVVLIVFAVIWLIPSLFALKTSLTDNGVAALGAREILKNWNPTVHSFASLLGGSDIWNWYLASGITSVLTTILTVVFASMAAFSLSRLTFRGSNVVLTMILLGIMIPAQVLIVPIFQELNAIGLLNTYWSVIFPQVPAVIAVFIFKQFFDGIPKDFEEAARIDGASVWKVYTRVVMPLSRPVIAAVTVLTFVGVWNNLLLPLYVLSNPGLMTIPVGLATTQGSYGLRYADIQAGALLAALPLIIIYLIFQRQIVEGVAGSGLKG

Crispr_ID: NZ_CP015970_4

• CRISPR_ID: NZ_CP015970_4
• CRISPR_location: 1992300-1997753
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 75 spacers
• Cas_protein_info: cas2,cas1,csb3,cas3,csb2gr5,csb1gr7

Consensus repeat of NZ_CP015970_4

Consensus_repeat	Method
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	PILER-CR
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CRISPRCasFinder
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CRT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	PILER-CR

spacers of NZ_CP015970_4

>4.1|1992336|38|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GACTCCTACATCCGCGCCTTCCGCTGGGCCACCGACCG
>4.2|1992410|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CTCGCTGAGGACTCCGACGGCCAGGCACCATCGGGTG
>4.3|1992483|38|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CCCGAGCCGACGGTTTGCATCATCTCGGTGACGTCGAA
>4.4|1992557|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CCGACCGGCCAGTACCTGCCACCGGAGCGCTGGCT
>4.5|1992628|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GACCACAGCCGTGCAGGCTCAGGTTACGGCCGCGACA
>4.6|1992701|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CGGTCTCATAGAGGCGCTCACCCTCCAGATCCCA
>4.7|1992771|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
TGACACTACTCCCCCGGTGAAGGGCCCGGACCAGGAC
>4.8|1992844|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GCGAGGACGGAGGCGATGGTGTCATCTGCGCCGTCTG
>4.9|1992917|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
TGAAGGACATGAAGGTGTCCATTCCGCCGTCGCTG
>4.10|1992988|38|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
AAGGACGGGGCGGCCGGCGTTCGGGAGTGGCGCGACAA
>4.11|1993062|36|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
AGGCTTGACCCCATCGACCGGCCCCTGTCGCGCTCT
>4.12|1993134|36|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GGGAAAAACAATACTATTTGGATATTTTGTCGTGTG
>4.13|1993206|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CGTTCTGGCCATGAGTTCACGACAGACCCTCTCGC
>4.14|1993277|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CCGTGGCCGAAGCCGATGACATTTCGCCACCTGGCAC
>4.15|1993350|38|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
AGCCCGAACACGGTTCCGACTGGCAGGCTGGACGTGTC
>4.16|1993424|36|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GAGTCCCCTACATCTCTCTCCTCACACCTCCTCGGC
>4.17|1993496|39|NZ_CP015970|CRISPRCasFinder,CRT
CGGCCGTGGGATGGTTGGTGCCGTAGTCGATGCCCAGCG
>4.18|1993571|52|NZ_CP015970|CRISPRCasFinder,CRT
GTGGGGACGACGCGGTCGGTCTCGAAGACGACGGTGGTGACGGGACCGTCAT
>4.19|1993659|38|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCCGCATCTCAGGCTGAGCACGAGGGCTGGATCTCGGA
>4.20|1993733|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
CTGCCCGACGACGGACCCCACTGGGTGACCGCCG
>4.21|1993803|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TGGACAGCCAAGTCCGGAAAACAGGCCACCAAAC
>4.22|1993873|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TCGTCGCTACCAAGGCCCCGGGCGCCACCACAGCA
>4.23|1993944|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TTCGGCCACTGCGACTCGGTCTCGATGCGGTCGGC
>4.24|1994015|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TCCGCCGGCTCCTCACAGGTCAAGGCCGCCGAGGA
>4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GAGCTGGGCACCGACCTGATCGACCCCGTCCCGAT
>4.26|1994157|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
CGCATCATCCACTCTGGCGCAGACCGGCACATAC
>4.27|1994227|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TGGAAGGTGGCTGAAATGGCTATCGACATGTCGCGGG
>4.28|1994300|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
ACAGTGCGCGGGCGCCCCTATTAAAAGATCCCGAAC
>4.29|1994372|40|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TTTCGTGGCGCCGCCGTGAAGTACGCCATCAGGGCGGGAA
>4.30|1994448|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCCATCACCACCTACGCCGGGCGGCCAGGACAGAA
>4.31|1994519|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
>4.32|1994590|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
>4.33|1994661|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
>4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
>4.35|1994801|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
>4.36|1994872|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
>4.37|1994944|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
>4.38|1995017|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
>4.39|1995088|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
>4.40|1995159|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
>4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
>4.42|1995299|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
>4.43|1995370|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
>4.44|1995442|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
>4.45|1995515|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
CCTAGCCCGTCGTACCCCTCCCGATACGCCGTCAC
>4.46|1995586|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GTATTAAAAATAGGCGCGAAACGTCGTCATCCGGA
>4.47|1995657|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCTGATACTGATTCGCTTCATTTGATGGGGCAGGAA
>4.48|1995729|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GACGATGATGGGGAATAAGTATGACTTATTACGAC
>4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GTCGGGGCGAATGGCTCGGGCAAGTCGCTGACGGC
>4.50|1995871|39|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TCTTAGGAGTGTGCAATGCCTGAAGCTCTTCCTTCAGAA
>4.51|1995946|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
ACGGACGTGTCGGAGGATGGCCTGAAGGTGACGAT
>4.52|1996017|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TTGTCACCAACATCGGCATCGGCGGAATGGTCCAGGT
>4.53|1996090|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TGGCCGGGACCGAATGACACTGCTGTGACTGAGCCG
>4.54|1996162|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GGCCACGACGCCGCGCTTCCCGGGGGATCCCGGCCAT
>4.55|1996235|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
ACGGTGATGGTGGAATCGAAGCCATCGGTCGCCCAA
>4.56|1996307|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
>4.57|1996379|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
>4.58|1996451|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
ATCCCAAATTTGGGCCGATCATGGCACCATCGGCGC
>4.59|1996523|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GCCGCCAGATTGAGGCTGTTCACCATCGACTTCCC
>4.60|1996594|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
AGGTCGCGTGCCAGTGGCTCCTCCATCTGGGCGCGC
>4.61|1996666|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TTCCAGTCGAGCAGCTCGGGCGGTAGCGCCCACTA
>4.62|1996737|38|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
ATGAGGAGCCAGTAGGGCACCATCGCGAAGTTCTGGCC
>4.63|1996811|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
CAATTGCTCGTCAATCTGACGATGATGACTTCCG
>4.64|1996881|38|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
CAGCGGTGGACGGTCGATGCGTAGGTGCGCACCGTGGA
>4.65|1996955|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
CCATGGCGCGACGTCTTCGTGGTGGTCAGGTGTGCGC
>4.66|1997028|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TTCGAGAGCGAGCCCCCGGCGTGGTGGGCGGACCG
>4.67|1997099|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GAGGCTCTGGCGTCTTCCTGGTTGCATTGCGGGCAT
>4.68|1997171|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GTGCCGGGCGGGCATCCGTGCTCGGCGATGTATGCCG
>4.69|1997244|38|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
CGGTTGACGTTGCTGTGGTGCAGCCAGCAGTCCTCAAG
>4.70|1997318|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
AGTCTGCCCGGCTGCGCGGTGAAGGCCAAGTCGACG
>4.71|1997390|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TCCTACGAGTCGCACGTCAAAGTCGGTGAGGACCTGG
>4.72|1997463|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GTCCGCGTGGACGACCTGTCCGTCACTACCAGCTC
>4.73|1997534|37|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TACGTGACGCCCCCCCGCCACACCTCACTACTAGGAG
>4.74|1997607|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
TCGTCATCCGCGCCATCGCCGAGCACCTCGTAGTCG
>4.75|1997679|38|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR
GACCGCGCGGGGTCGTCCAGGCCGGGATGCACTGGGAC

CRISPR arrays and Neighbor proteins around NZ_CP015970_4

CRISPR arrays

The CRISPR arrays of NZ_CP015970_4

>merge|NZ_CP015970|4|1992300-1997753|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGACTCCTACATCCGCGCCTTCCGCTGGGCCACCGACCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCTCGCTGAGGACTCCGACGGCCAGGCACCATCGGGTGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCCGAGCCGACGGTTTGCATCATCTCGGTGACGTCGAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCGACCGGCCAGTACCTGCCACCGGAGCGCTGGCTATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGACCACAGCCGTGCAGGCTCAGGTTACGGCCGCGACAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGGTCTCATAGAGGCGCTCACCCTCCAGATCCCAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTGACACTACTCCCCCGGTGAAGGGCCCGGACCAGGACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCGAGGACGGAGGCGATGGTGTCATCTGCGCCGTCTGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTGAAGGACATGAAGGTGTCCATTCCGCCGTCGCTGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCAAGGACGGGGCGGCCGGCGTTCGGGAGTGGCGCGACAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCAGGCTTGACCCCATCGACCGGCCCCTGTCGCGCTCTATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGGGAAAAACAATACTATTTGGATATTTTGTCGTGTGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGTTCTGGCCATGAGTTCACGACAGACCCTCTCGCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCGTGGCCGAAGCCGATGACATTTCGCCACCTGGCACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCAGCCCGAACACGGTTCCGACTGGCAGGCTGGACGTGTCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGAGTCCCCTACATCTCTCTCCTCACACCTCCTCGGCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGGCCGTGGGATGGTTGGTGCCGTAGTCGATGCCCAGCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTGGGGACGACGCGGTCGGTCTCGAAGACGACGGTGGTGACGGGACCGTCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCCGCATCTCAGGCTGAGCACGAGGGCTGGATCTCGGAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCTGCCCGACGACGGACCCCACTGGGTGACCGCCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTGGACAGCCAAGTCCGGAAAACAGGCCACCAAACATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGCTCGTCGCTACCAAGGCCCCGGGCGCCACCACAGCAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTTCGGCCACTGCGACTCGGTCTCGATGCGGTCGGCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTCCGCCGGCTCCTCACAGGTCAAGGCCGCCGAGGAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGAGCTGGGCACCGACCTGATCGACCCCGTCCCGATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGCATCATCCACTCTGGCGCAGACCGGCACATACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTGGAAGGTGGCTGAAATGGCTATCGACATGTCGCGGGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCACAGTGCGCGGGCGCCCCTATTAAAAGATCCCGAACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTTTCGTGGCGCCGCCGTGAAGTACGCCATCAGGGCGGGAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCCATCACCACCTACGCCGGGCGGCCAGGACAGAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTTGGCCCGTCATGACGCCGACGACCTGATCGAGATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCAATCATGAATATCAAGGTCCGGCAATTCCTGCCCCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTTGGCCCGTCATGACGCCGACGACCTGATCGAGATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCAATCATGAATATCAAGGTCCGGCAATTCCTGCCCCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCTAGCCCGTCGTACCCCTCCCGATACGCCGTCACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTATTAAAAATAGGCGCGAAACGTCGTCATCCGGAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTAAGGCGCTGATACTGATTCGCTTCATTTGATGGGGCAGGAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGACGATGATGGGGAATAAGTATGACTTATTACGACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTCGGGGCGAATGGCTCGGGCAAGTCGCTGACGGCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTCTTAGGAGTGTGCAATGCCTGAAGCTCTTCCTTCAGAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCACGGACGTGTCGGAGGATGGCCTGAAGGTGACGATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTTGTCACCAACATCGGCATCGGCGGAATGGTCCAGGTATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTGGCCGGGACCGAATGACACTGCTGTGACTGAGCCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGGCCACGACGCCGCGCTTCCCGGGGGATCCCGGCCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCACGGTGATGGTGGAATCGAAGCCATCGGTCGCCCAAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCATCCCAAATTTGGGCCGATCATGGCACCATCGGCGCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCCGCCAGATTGAGGCTGTTCACCATCGACTTCCCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCAGGTCGCGTGCCAGTGGCTCCTCCATCTGGGCGCGCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTTCCAGTCGAGCAGCTCGGGCGGTAGCGCCCACTAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCATGAGGAGCCAGTAGGGCACCATCGCGAAGTTCTGGCCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCAATTGCTCGTCAATCTGACGATGATGACTTCCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCAGCGGTGGACGGTCGATGCGTAGGTGCGCACCGTGGAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCATGGCGCGACGTCTTCGTGGTGGTCAGGTGTGCGCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTTCGAGAGCGAGCCCCCGGCGTGGTGGGCGGACCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGAGGCTCTGGCGTCTTCCTGGTTGCATTGCGGGCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTGCCGGGCGGGCATCCGTGCTCGGCGATGTATGCCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGGTTGACGTTGCTGTGGTGCAGCCAGCAGTCCTCAAGATCGCTCCCCTTTCCAGGGGGGCCCTTCGTTGAGGCAGTCTGCCCGGCTGCGCGGTGAAGGCCAAGTCGACGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTCCTACGAGTCGCACGTCAAAGTCGGTGAGGACCTGGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTCCGCGTGGACGACCTGTCCGTCACTACCAGCTCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTACGTGACGCCCCCCCGCCACACCTCACTACTAGGAGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTCGTCATCCGCGCCATCGCCGAGCACCTCGTAGTCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGACCGCGCGGGGTCGTCCAGGCCGGGATGCACTGGGACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCC

>NZ_CP015970|4|1|1992300-1993495|PILER-CR
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACTCCTACATCCGCGCCTTCCGCTGGGCCACCGACCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CTCGCTGAGGACTCCGACGGCCAGGCACCATCGGGTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCCGAGCCGACGGTTTGCATCATCTCGGTGACGTCGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGACCGGCCAGTACCTGCCACCGGAGCGCTGGCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCACAGCCGTGCAGGCTCAGGTTACGGCCGCGACA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGTCTCATAGAGGCGCTCACCCTCCAGATCCCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGACACTACTCCCCCGGTGAAGGGCCCGGACCAGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGAGGACGGAGGCGATGGTGTCATCTGCGCCGTCTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGAAGGACATGAAGGTGTCCATTCCGCCGTCGCTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AAGGACGGGGCGGCCGGCGTTCGGGAGTGGCGCGACAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGGCTTGACCCCATCGACCGGCCCCTGTCGCGCTCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGGAAAAACAATACTATTTGGATATTTTGTCGTGTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGTTCTGGCCATGAGTTCACGACAGACCCTCTCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGTGGCCGAAGCCGATGACATTTCGCCACCTGGCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGCCCGAACACGGTTCCGACTGGCAGGCTGGACGTGTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGTCCCCTACATCTCTCTCCTCACACCTCCTCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGGCCGTGGGATGGTTGGTGCCGTAGTCGATGCCCAGCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTGGGGACGACGCGGTCGGTCTCGAAGACGACGGTGGTGACGGGACCGTCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCGCATCTCAGGCTGAGCACGAGGGCTGGATCTCGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CTGCCCGACGACGGACCCCACTGGGTGACCGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGACAGCCAAGTCCGGAAAACAGGCCACCAAAC
ATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGC	TCGTCGCTACCAAGGCCCCGGGCGCCACCACAGCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCGGCCACTGCGACTCGGTCTCGATGCGGTCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCCGCCGGCTCCTCACAGGTCAAGGCCGCCGAGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGCTGGGCACCGACCTGATCGACCCCGTCCCGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGCATCATCCACTCTGGCGCAGACCGGCACATAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGAAGGTGGCTGAAATGGCTATCGACATGTCGCGGG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACAGTGCGCGGGCGCCCCTATTAAAAGATCCCGAAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTTCGTGGCGCCGCCGTGAAGTACGCCATCAGGGCGGGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCATCACCACCTACGCCGGGCGGCCAGGACAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCTAGCCCGTCGTACCCCTCCCGATACGCCGTCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTATTAAAAATAGGCGCGAAACGTCGTCATCCGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTAAGGC	GCTGATACTGATTCGCTTCATTTGATGGGGCAGGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACGATGATGGGGAATAAGTATGACTTATTACGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTCGGGGCGAATGGCTCGGGCAAGTCGCTGACGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCTTAGGAGTGTGCAATGCCTGAAGCTCTTCCTTCAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACGGACGTGTCGGAGGATGGCCTGAAGGTGACGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGTCACCAACATCGGCATCGGCGGAATGGTCCAGGT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGCCGGGACCGAATGACACTGCTGTGACTGAGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGCCACGACGCCGCGCTTCCCGGGGGATCCCGGCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACGGTGATGGTGGAATCGAAGCCATCGGTCGCCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATCCCAAATTTGGGCCGATCATGGCACCATCGGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCGCCAGATTGAGGCTGTTCACCATCGACTTCCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGGTCGCGTGCCAGTGGCTCCTCCATCTGGGCGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCCAGTCGAGCAGCTCGGGCGGTAGCGCCCACTA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGGAGCCAGTAGGGCACCATCGCGAAGTTCTGGCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAATTGCTCGTCAATCTGACGATGATGACTTCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGCGGTGGACGGTCGATGCGTAGGTGCGCACCGTGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCATGGCGCGACGTCTTCGTGGTGGTCAGGTGTGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCGAGAGCGAGCCCCCGGCGTGGTGGGCGGACCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGGCTCTGGCGTCTTCCTGGTTGCATTGCGGGCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGCCGGGCGGGCATCCGTGCTCGGCGATGTATGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGTTGACGTTGCTGTGGTGCAGCCAGCAGTCCTCAAG
ATCGCTCCCCTTTCCAGGGGGGCCCTTCGTTGAGGC	AGTCTGCCCGGCTGCGCGGTGAAGGCCAAGTCGACG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCCTACGAGTCGCACGTCAAAGTCGGTGAGGACCTGG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTCCGCGTGGACGACCTGTCCGTCACTACCAGCTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TACGTGACGCCCCCCCGCCACACCTCACTACTAGGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCGTCATCCGCGCCATCGCCGAGCACCTCGTAGTCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCGCGCGGGGTCGTCCAGGCCGGGATGCACTGGGAC


>NZ_CP015970|4|4|1992300-1997753|CRISPRCasFinder
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACTCCTACATCCGCGCCTTCCGCTGGGCCACCGACCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CTCGCTGAGGACTCCGACGGCCAGGCACCATCGGGTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCCGAGCCGACGGTTTGCATCATCTCGGTGACGTCGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGACCGGCCAGTACCTGCCACCGGAGCGCTGGCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCACAGCCGTGCAGGCTCAGGTTACGGCCGCGACA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGTCTCATAGAGGCGCTCACCCTCCAGATCCCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGACACTACTCCCCCGGTGAAGGGCCCGGACCAGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGAGGACGGAGGCGATGGTGTCATCTGCGCCGTCTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGAAGGACATGAAGGTGTCCATTCCGCCGTCGCTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AAGGACGGGGCGGCCGGCGTTCGGGAGTGGCGCGACAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGGCTTGACCCCATCGACCGGCCCCTGTCGCGCTCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGGAAAAACAATACTATTTGGATATTTTGTCGTGTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGTTCTGGCCATGAGTTCACGACAGACCCTCTCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGTGGCCGAAGCCGATGACATTTCGCCACCTGGCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGCCCGAACACGGTTCCGACTGGCAGGCTGGACGTGTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGTCCCCTACATCTCTCTCCTCACACCTCCTCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGCCGTGGGATGGTTGGTGCCGTAGTCGATGCCCAGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGGGGACGACGCGGTCGGTCTCGAAGACGACGGTGGTGACGGGACCGTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCGCATCTCAGGCTGAGCACGAGGGCTGGATCTCGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CTGCCCGACGACGGACCCCACTGGGTGACCGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGACAGCCAAGTCCGGAAAACAGGCCACCAAAC
ATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGC	TCGTCGCTACCAAGGCCCCGGGCGCCACCACAGCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCGGCCACTGCGACTCGGTCTCGATGCGGTCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCCGCCGGCTCCTCACAGGTCAAGGCCGCCGAGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGCTGGGCACCGACCTGATCGACCCCGTCCCGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGCATCATCCACTCTGGCGCAGACCGGCACATAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGAAGGTGGCTGAAATGGCTATCGACATGTCGCGGG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACAGTGCGCGGGCGCCCCTATTAAAAGATCCCGAAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTTCGTGGCGCCGCCGTGAAGTACGCCATCAGGGCGGGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCATCACCACCTACGCCGGGCGGCCAGGACAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCTAGCCCGTCGTACCCCTCCCGATACGCCGTCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTATTAAAAATAGGCGCGAAACGTCGTCATCCGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTAAGGC	GCTGATACTGATTCGCTTCATTTGATGGGGCAGGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACGATGATGGGGAATAAGTATGACTTATTACGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTCGGGGCGAATGGCTCGGGCAAGTCGCTGACGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCTTAGGAGTGTGCAATGCCTGAAGCTCTTCCTTCAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACGGACGTGTCGGAGGATGGCCTGAAGGTGACGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGTCACCAACATCGGCATCGGCGGAATGGTCCAGGT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGCCGGGACCGAATGACACTGCTGTGACTGAGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGCCACGACGCCGCGCTTCCCGGGGGATCCCGGCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACGGTGATGGTGGAATCGAAGCCATCGGTCGCCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATCCCAAATTTGGGCCGATCATGGCACCATCGGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCGCCAGATTGAGGCTGTTCACCATCGACTTCCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGGTCGCGTGCCAGTGGCTCCTCCATCTGGGCGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCCAGTCGAGCAGCTCGGGCGGTAGCGCCCACTA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGGAGCCAGTAGGGCACCATCGCGAAGTTCTGGCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAATTGCTCGTCAATCTGACGATGATGACTTCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGCGGTGGACGGTCGATGCGTAGGTGCGCACCGTGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCATGGCGCGACGTCTTCGTGGTGGTCAGGTGTGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCGAGAGCGAGCCCCCGGCGTGGTGGGCGGACCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGGCTCTGGCGTCTTCCTGGTTGCATTGCGGGCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGCCGGGCGGGCATCCGTGCTCGGCGATGTATGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGTTGACGTTGCTGTGGTGCAGCCAGCAGTCCTCAAG
ATCGCTCCCCTTTCCAGGGGGGCCCTTCGTTGAGGC	AGTCTGCCCGGCTGCGCGGTGAAGGCCAAGTCGACG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCCTACGAGTCGCACGTCAAAGTCGGTGAGGACCTGG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTCCGCGTGGACGACCTGTCCGTCACTACCAGCTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TACGTGACGCCCCCCCGCCACACCTCACTACTAGGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCGTCATCCGCGCCATCGCCGAGCACCTCGTAGTCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCGCGCGGGGTCGTCCAGGCCGGGATGCACTGGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCC

>NZ_CP015970|4|1|1992300-1997752|CRT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACTCCTACATCCGCGCCTTCCGCTGGGCCACCGACCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CTCGCTGAGGACTCCGACGGCCAGGCACCATCGGGTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCCGAGCCGACGGTTTGCATCATCTCGGTGACGTCGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGACCGGCCAGTACCTGCCACCGGAGCGCTGGCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCACAGCCGTGCAGGCTCAGGTTACGGCCGCGACA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGTCTCATAGAGGCGCTCACCCTCCAGATCCCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGACACTACTCCCCCGGTGAAGGGCCCGGACCAGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGAGGACGGAGGCGATGGTGTCATCTGCGCCGTCTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGAAGGACATGAAGGTGTCCATTCCGCCGTCGCTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AAGGACGGGGCGGCCGGCGTTCGGGAGTGGCGCGACAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGGCTTGACCCCATCGACCGGCCCCTGTCGCGCTCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGGAAAAACAATACTATTTGGATATTTTGTCGTGTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGTTCTGGCCATGAGTTCACGACAGACCCTCTCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGTGGCCGAAGCCGATGACATTTCGCCACCTGGCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGCCCGAACACGGTTCCGACTGGCAGGCTGGACGTGTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGTCCCCTACATCTCTCTCCTCACACCTCCTCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGCCGTGGGATGGTTGGTGCCGTAGTCGATGCCCAGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGGGGACGACGCGGTCGGTCTCGAAGACGACGGTGGTGACGGGACCGTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCGCATCTCAGGCTGAGCACGAGGGCTGGATCTCGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CTGCCCGACGACGGACCCCACTGGGTGACCGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGACAGCCAAGTCCGGAAAACAGGCCACCAAAC
ATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGC	TCGTCGCTACCAAGGCCCCGGGCGCCACCACAGCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCGGCCACTGCGACTCGGTCTCGATGCGGTCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCCGCCGGCTCCTCACAGGTCAAGGCCGCCGAGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGCTGGGCACCGACCTGATCGACCCCGTCCCGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGCATCATCCACTCTGGCGCAGACCGGCACATAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGAAGGTGGCTGAAATGGCTATCGACATGTCGCGGG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACAGTGCGCGGGCGCCCCTATTAAAAGATCCCGAAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTTCGTGGCGCCGCCGTGAAGTACGCCATCAGGGCGGGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCATCACCACCTACGCCGGGCGGCCAGGACAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCTAGCCCGTCGTACCCCTCCCGATACGCCGTCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTATTAAAAATAGGCGCGAAACGTCGTCATCCGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTAAGGC	GCTGATACTGATTCGCTTCATTTGATGGGGCAGGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACGATGATGGGGAATAAGTATGACTTATTACGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTCGGGGCGAATGGCTCGGGCAAGTCGCTGACGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCTTAGGAGTGTGCAATGCCTGAAGCTCTTCCTTCAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACGGACGTGTCGGAGGATGGCCTGAAGGTGACGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGTCACCAACATCGGCATCGGCGGAATGGTCCAGGT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGCCGGGACCGAATGACACTGCTGTGACTGAGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGCCACGACGCCGCGCTTCCCGGGGGATCCCGGCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACGGTGATGGTGGAATCGAAGCCATCGGTCGCCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATCCCAAATTTGGGCCGATCATGGCACCATCGGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCGCCAGATTGAGGCTGTTCACCATCGACTTCCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGGTCGCGTGCCAGTGGCTCCTCCATCTGGGCGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCCAGTCGAGCAGCTCGGGCGGTAGCGCCCACTA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGGAGCCAGTAGGGCACCATCGCGAAGTTCTGGCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAATTGCTCGTCAATCTGACGATGATGACTTCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGCGGTGGACGGTCGATGCGTAGGTGCGCACCGTGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCATGGCGCGACGTCTTCGTGGTGGTCAGGTGTGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCGAGAGCGAGCCCCCGGCGTGGTGGGCGGACCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGGCTCTGGCGTCTTCCTGGTTGCATTGCGGGCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGCCGGGCGGGCATCCGTGCTCGGCGATGTATGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGTTGACGTTGCTGTGGTGCAGCCAGCAGTCCTCAAG
ATCGCTCCCCTTTCCAGGGGGGCCCTTCGTTGAGGC	AGTCTGCCCGGCTGCGCGGTGAAGGCCAAGTCGACG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCCTACGAGTCGCACGTCAAAGTCGGTGAGGACCTGG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTCCGCGTGGACGACCTGTCCGTCACTACCAGCTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TACGTGACGCCCCCCCGCCACACCTCACTACTAGGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCGTCATCCGCGCCATCGCCGAGCACCTCGTAGTCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCGCGCGGGGTCGTCCAGGCCGGGATGCACTGGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC

>NZ_CP015970|4|2|1993623-1997752|PILER-CR
	GACTCCTACATCCGCGCCTTCCGCTGGGCCACCGACCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CTCGCTGAGGACTCCGACGGCCAGGCACCATCGGGTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCCGAGCCGACGGTTTGCATCATCTCGGTGACGTCGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGACCGGCCAGTACCTGCCACCGGAGCGCTGGCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCACAGCCGTGCAGGCTCAGGTTACGGCCGCGACA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGTCTCATAGAGGCGCTCACCCTCCAGATCCCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGACACTACTCCCCCGGTGAAGGGCCCGGACCAGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGAGGACGGAGGCGATGGTGTCATCTGCGCCGTCTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGAAGGACATGAAGGTGTCCATTCCGCCGTCGCTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AAGGACGGGGCGGCCGGCGTTCGGGAGTGGCGCGACAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGGCTTGACCCCATCGACCGGCCCCTGTCGCGCTCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGGAAAAACAATACTATTTGGATATTTTGTCGTGTG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGTTCTGGCCATGAGTTCACGACAGACCCTCTCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGTGGCCGAAGCCGATGACATTTCGCCACCTGGCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGCCCGAACACGGTTCCGACTGGCAGGCTGGACGTGTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGTCCCCTACATCTCTCTCCTCACACCTCCTCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGGCCGTGGGATGGTTGGTGCCGTAGTCGATGCCCAGCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTGGGGACGACGCGGTCGGTCTCGAAGACGACGGTGGTGACGGGACCGTCATATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCGCATCTCAGGCTGAGCACGAGGGCTGGATCTCGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CTGCCCGACGACGGACCCCACTGGGTGACCGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGACAGCCAAGTCCGGAAAACAGGCCACCAAAC
ATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGC	TCGTCGCTACCAAGGCCCCGGGCGCCACCACAGCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCGGCCACTGCGACTCGGTCTCGATGCGGTCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCCGCCGGCTCCTCACAGGTCAAGGCCGCCGAGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGCTGGGCACCGACCTGATCGACCCCGTCCCGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGCATCATCCACTCTGGCGCAGACCGGCACATAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGAAGGTGGCTGAAATGGCTATCGACATGTCGCGGG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACAGTGCGCGGGCGCCCCTATTAAAAGATCCCGAAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTTCGTGGCGCCGCCGTGAAGTACGCCATCAGGGCGGGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCATCACCACCTACGCCGGGCGGCCAGGACAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGGCCCGTCATGACGCCGACGACCTGATCGAGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCTCCGCAGCGCCAGGCCTCGCGGTCGGCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAATCAAGGCGGAGCCGCCCGGCCCCGCGCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCAGCCATCAACCGCGCAGCCCTGGCTGCCGAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCACACGGTGGTCCATTCGGGCTCGAAGTACTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AATCATGAATATCAAGGTCCGGCAATTCCTGCCCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCTAGCCCGTCGTACCCCTCCCGATACGCCGTCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTATTAAAAATAGGCGCGAAACGTCGTCATCCGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTAAGGC	GCTGATACTGATTCGCTTCATTTGATGGGGCAGGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACGATGATGGGGAATAAGTATGACTTATTACGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTCGGGGCGAATGGCTCGGGCAAGTCGCTGACGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCTTAGGAGTGTGCAATGCCTGAAGCTCTTCCTTCAGAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACGGACGTGTCGGAGGATGGCCTGAAGGTGACGAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTGTCACCAACATCGGCATCGGCGGAATGGTCCAGGT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TGGCCGGGACCGAATGACACTGCTGTGACTGAGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGCCACGACGCCGCGCTTCCCGGGGGATCCCGGCCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACGGTGATGGTGGAATCGAAGCCATCGGTCGCCCAA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATTCCTGCACTGCCTCGCTCATGCCGCCTCCTTCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATCCCAAATTTGGGCCGATCATGGCACCATCGGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCCGCCAGATTGAGGCTGTTCACCATCGACTTCCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	AGGTCGCGTGCCAGTGGCTCCTCCATCTGGGCGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCCAGTCGAGCAGCTCGGGCGGTAGCGCCCACTA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGGAGCCAGTAGGGCACCATCGCGAAGTTCTGGCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAATTGCTCGTCAATCTGACGATGATGACTTCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGCGGTGGACGGTCGATGCGTAGGTGCGCACCGTGGA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCATGGCGCGACGTCTTCGTGGTGGTCAGGTGTGCGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TTCGAGAGCGAGCCCCCGGCGTGGTGGGCGGACCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GAGGCTCTGGCGTCTTCCTGGTTGCATTGCGGGCAT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGCCGGGCGGGCATCCGTGCTCGGCGATGTATGCCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGTTGACGTTGCTGTGGTGCAGCCAGCAGTCCTCAAG
ATCGCTCCCCTTTCCAGGGGGGCCCTTCGTTGAGGC	AGTCTGCCCGGCTGCGCGGTGAAGGCCAAGTCGACG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCCTACGAGTCGCACGTCAAAGTCGGTGAGGACCTGG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTCCGCGTGGACGACCTGTCCGTCACTACCAGCTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TACGTGACGCCCCCCCGCCACACCTCACTACTAGGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCGTCATCCGCGCCATCGCCGAGCACCTCGTAGTCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCGCGCGGGGTCGTCCAGGCCGGGATGCACTGGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062818754.1|1997767_1998883_-|IS630-family-transposase	unknown	unknown	gnl|CDD|315923
NZ_CP015970.1|WP_062819517.1|2004810_2005788_+|ribokinase	unknown	unknown	gnl|CDD|238579
NZ_CP015970.1|WP_062819516.1|2004179_2004818_+|SIS-domain-containing-protein	unknown	unknown	gnl|CDD|129488
NZ_CP015970.1|WP_062819512.1|1991815_1992115_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP015970.1|WP_062819508.1|1985025_1986609_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl|CDD|274005
NZ_CP015970.1|WP_062819518.1|2005784_2006867_+|DUF2961-domain-containing-protein	unknown	unknown	gnl|CDD|378582
NZ_CP015970.1|WP_062819507.1|1983814_1985023_+|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl|CDD|378223
NZ_CP015970.1|WP_062819503.1|1978110_1978800_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP015970.1|WP_082815946.1|2001843_2002422_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270451
NZ_CP015970.1|WP_062819520.1|2008211_2009579_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270451
NZ_CP015970.1|WP_062819509.1|1986605_1989233_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl|CDD|274235
NZ_CP015970.1|WP_062820717.1|1975636_1978114_+|DUF4118-domain-containing-protein	unknown	unknown	gnl|CDD|225115
NZ_CP015970.1|WP_062819511.1|1990214_1991819_+|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NZ_CP015970.1|WP_062819504.1|1978813_1979881_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062819513.1|2000408_2001716_-|ISL3-family-transposase	unknown	unknown	gnl|CDD|376574
NZ_CP015970.1|WP_062819505.1|1980021_1980672_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062819510.1|1989229_1990228_+|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl|CDD|187733
NZ_CP015970.1|WP_062819515.1|2002732_2003854_+|DeoR/GlpR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380491
NZ_CP015970.1|WP_062819519.1|2006874_2008059_+|DUF4185-domain-containing-protein	unknown	unknown	gnl|CDD|379383
NZ_CP015970.1|WP_099092985.1|2009584_2010526_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP015970.1|WP_062819509.1|1986605_1989233_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	3.6e-91	300.9	0.0
NZ_CP015970.1|WP_062819512.1|1991815_1992115_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	4.8e-21	69.5	0.0
NZ_CP015970.1|WP_062819508.1|1985025_1986609_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	9.1e-83	273.5	11.3
NZ_CP015970.1|WP_062819507.1|1983814_1985023_+|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	6.6e-16	53.5	0.0
NZ_CP015970.1|WP_062819511.1|1990214_1991819_+|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	7.8e-81	266.2	0.0
NZ_CP015970.1|WP_062819510.1|1989229_1990228_+|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	1.4e-83	275.6	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_062818754.1|1997767_1998883_-|IS630-family-transposase	gnl|CDD|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.36081e-15
NZ_CP015970.1|WP_062819517.1|2004810_2005788_+|ribokinase	gnl|CDD|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	2.56321e-109
NZ_CP015970.1|WP_062819516.1|2004179_2004818_+|SIS-domain-containing-protein	gnl|CDD|129488	TIGR00393, Probable_arabinose_5-phosphate_isomerase, KpsF/GutQ family protein. This model describes a number of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. One is GutQ, a protein of the glucitol operon. Another is KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of E. coli. [Energy metabolism, Sugars].	2.73284e-57
NZ_CP015970.1|WP_062819512.1|1991815_1992115_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.33933e-21
NZ_CP015970.1|WP_062819508.1|1985025_1986609_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl|CDD|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.98328e-77
NZ_CP015970.1|WP_062819518.1|2005784_2006867_+|DUF2961-domain-containing-protein	gnl|CDD|378582	pfam11175, DUF2961, Protein of unknown function (DUF2961). This family of proteins has no known function.	7.6354e-115
NZ_CP015970.1|WP_062819507.1|1983814_1985023_+|type-I-U-CRISPR-associated-protein-Cas7	gnl|CDD|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	5.45116e-28
NZ_CP015970.1|WP_062819503.1|1978110_1978800_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.64561e-71
NZ_CP015970.1|WP_082815946.1|2001843_2002422_-|extracellular-solute-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.03518e-34
NZ_CP015970.1|WP_062819520.1|2008211_2009579_+|extracellular-solute-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.28873e-52
NZ_CP015970.1|WP_062819509.1|1986605_1989233_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	3.66478e-85
NZ_CP015970.1|WP_062820717.1|1975636_1978114_+|DUF4118-domain-containing-protein	gnl|CDD|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	1.07023e-175
NZ_CP015970.1|WP_062819511.1|1990214_1991819_+|CRISPR-associated-endonuclease-Cas4/Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	7.25226e-94
NZ_CP015970.1|WP_062819513.1|2000408_2001716_-|ISL3-family-transposase	gnl|CDD|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	8.38752e-74
NZ_CP015970.1|WP_099092985.1|2009584_2010526_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.50492e-69
NZ_CP015970.1|WP_062819510.1|1989229_1990228_+|hypothetical-protein	gnl|CDD|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	1.26451e-82
NZ_CP015970.1|WP_062819515.1|2002732_2003854_+|DeoR/GlpR-family-transcriptional-regulator	gnl|CDD|380491	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. Ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. In most cases, ligands are monosaccharide including lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. The LacI family of proteins consists of transcriptional regulators related to the lac repressor. In this case, the domain sugar binding changes the DNA binding activity of the repressor domain.	1.27346e-48
NZ_CP015970.1|WP_062819519.1|2006874_2008059_+|DUF4185-domain-containing-protein	gnl|CDD|379383	pfam13810, DUF4185, Domain of unknown function (DUF4185).	9.03125e-82

Protein sequences

>NZ_CP015970.1|WP_062819512.1|1991815_1992115_+|CRISPR-associated-endonuclease-Cas2
MRQDSHRFLVAYDIPDDRRRSHMAIALKRFGLRVQYSVFMVDCSPSHVLVLQRELEDIMDRDQDSVLVSDLGLSKTADARAMTWLGHSRYIVGDGTMIV
>NZ_CP015970.1|WP_062819511.1|1990214_1991819_+|CRISPR-associated-endonuclease-Cas4/Cas1
MDSDDTIPISLIAHTVFCPRRAWLEAQGEQVDSFAITAGTMAHKRVDNASESRPGVERAMLIHSDELGLTGRCDVVKEHDDDSLEVIEYKSTPSRRRAEITESQRIQVIAQAMCLEEMGYHVTSAGVYFTNHHTQVPVLIDNDARTECREWVQRTRELIGSFHAPEPLLDDPRCVGCSHAAVCLPDENRHTEGQKARSISVSDPDGTILHIVTPGARASLRQGRVTVSKAGEELASVPLEKVCGIVVHGNVDLSSALVREMLWRRLTVVWCSGRGRVIGWASSAESPNGQPRVHLHSMSELGCLPIAQQVIRAKIGNQATLLRRNGDCPGLVTELRSLSRATADMPSLPELFALEGRAAQSYFSGFPSMLKGGESDAFLREWPGRHGRGATDPLNAAMNFTYSLLLSDCIRALVACGLDPHAGFLHSPSRNKPALALDLMEEFRAPIADSVILTCINNGALTTDMFTHTLGDSRLTAQGRNAIVSAYEHRVTTEISHPTFGYTVSWRRTIEVQARIILGVVDGTRADYKGMTVR
>NZ_CP015970.1|WP_062819510.1|1989229_1990228_+|hypothetical-protein
MNIELGGGLNSALTHFALVGLAAILEEAGATKVRLGWTAEGVAKARITWEGPEAGDAVKGHAERHADEGSWVQAKGLEGDTGLFSPRIKVPKAVDGWIDLEGRREAILDSGLTELDARMVSNLGEPGYWVVDNRENQPDRAASRWEMKTRNRGEEFIGKRLAPLAAIVAARPASSITDGLTGASTTDRAGKDSPGSRTSTGLTPPGPTDDALAWCGLWGISSFALVPAVSKVSATSGASPLRALHPRRALIPVADHMLSPAAWRALMASRAVNDLASADTERQSAAVAELPLRGVIGACDFTVHKGGSSSAPERMILSGEFHLLEYFLYGLR
>NZ_CP015970.1|WP_062819509.1|1986605_1989233_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTFTVSDFPRFFAAVNGGHRPFPWQMRLIDSIITEGRWPAAITAPTGSGKSAVVETHIFLTALNAVGAAPRLPRRLCVVVDRRALVDSQADRAARVLSWLETSSDALAAEMAGALRSLSLSPDSPPVVLANLRGGIATDRRWIDDPGACAVISATPDMWGSRLLMRGYGTSPAARPREAGLLGVDSVVVIDEAHLSRQLLGTARWVAGHAGEKASAIGVPALQVVESSATARVDEGGTAIGISAEDLADPGLAPRMTRPKPVRFLESPDWSGKKGSKKYVETLAEEANRLYDPQICGTVGCIVNRIDTALRLAEALGDDCPCWVGPMRPMDLTALKADYPGLFGLPDDGTHTTPRFLVATQTVEVGIDVDFVALVTELAPASSLAQRFGRVNRKGARDSGPITVVGPPERAVKDQLPYLQEDLRAGLTWLHDLDGPGGASPESIMACPPPPTLPERPIVKLPHVGDVMRWEATDDAMVADEELELWIRDSLQPDQLQAGLVVRSPLPDDDALAISLLTATPPSEDEVFPVALWKLRSVLTTLSERHGDHDRAFVLRDDEVNDIRLDDDPVDIRAGDVVFVDSGHALTRKGVVVTDASRPEALKTLWGTASTRVIVDGLPGAHWLEDLCGLEDDEAQRAFTDAAENGLITRGPDLIEGVRLSWIVVKGTEEIKDDDSIRQVWTPSEGLVTLEAHQDGVACRAGHLCDTIGITATLRDDLVAAGLHHDDGKADPRFQKYRLNAPDGSEPLAKSPARSAQDVSRRRWSSGLPRGWRHELRSVAVAWPAIEESDDPELVARLIGTSHGRGRVLPQPNASSLINEQRDDDALKNRIMDLFVEGEWCSLMGRTSWRLGAWTCCYLEAVLRAADCRVSKEGS
>NZ_CP015970.1|WP_062819508.1|1985025_1986609_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MPPLTIRAHFPLGTFQGHAEDGSPSRLPDTARLYSALINAAGNGSQAEPRKGQLRISSESAAALSWMERHPPTELMVPEYVPAFSGVTSYRDEGTAEKPPSASPRIRKSARTINTATALAGPFGWFWEDAPPNVQETIGRLCEDVSCLGESDSPVVLTLEPIEATHKIVTEPSELHPRGILIRTPSPGRLDELERAWETDHPKKLPTKANDRPKVAERPAGSKIPMAALRTLQYERPTLPPPREPWPFAFLIPISRDSRAPQPNAAIDWCVATHRMLVARMGDAAPASITGNYPRDVLSPANRVAIQYIPRSYMPEQKLTGQAGDGFPNGALLVLLPAGLPPEDRIQIGNALNAPNLRVWIRAADGPTRTLELGESSLISLHDFWPEIRPGWRRTWRSARGLVPETRRQPDDPELGRWGFEQAALLSLYHVFRDHLPDLPRRDYWSMIRAVTDKKEGAAKVLSTHLIADSHVNRYAHKAPRSIGAVQPYDAEFDLGHLVGGRALIAVGQSRHLGGGLLVPVDTPEES
>NZ_CP015970.1|WP_062819507.1|1983814_1985023_+|type-I-U-CRISPR-associated-protein-Cas7
MDTLTYTDVESACRAGGATVLSSVTDLVPAAGPHAGIAPARYVSGRNATYAYETRYIDGAAQSVVDIDGKASQLNRIEDAIALAIQEGDPGLTRMPSIRVTYEGHPEYTSFEYQLPHRYTDGHVRFGTHDGLPVTESPAFIAARNATPADATALLELSPVSLVLGSWDSTRKAHQARYRSCATGEIIGVLADQGEHGRKPSPRGAARKDDLAPSVQLTEKDMLALLKTQETEMSSKTVENIKKKAKDAKSGKTSASVLGLGSIPPSLDALGLVSCSRIIRSHVLTFSALRQIRFGNDNDANVACRALLAALALHGIALADEELSLRANCDLREAGETQVALDGRRGTQREIAPLTRDVTGPLLIAAIDAAQAKAGIRWEGQVFEVIGNPIILGGIDADADED
>NZ_CP015970.1|WP_062819505.1|1980021_1980672_-|hypothetical-protein
MAGNLRGDARATIAAGLDSALDKQRPVAVANVARLRQLHPDKTAEELVAYFENWYLGTVSFGDVAVDRTVSGPDGVVEMPAALGDFLAYVDASVLFILEAAEVQGLVPEDHDRRKLLVLSALVGDADGKALEPLIGEVGPLWGPKIVDGIPLEAVVAANETLGSRIDTTWGDTGAPVPGRHAAVKVTVDADGDGDGLFGWRAVTSARKILGPARAQ
>NZ_CP015970.1|WP_062819504.1|1978813_1979881_-|hypothetical-protein
MTIAIKYGFLEEDPVVDDHGRFIARGAGAVFVQRLFEIYPDAVLVGDQDRHCDSFEMRSLTSLDAESDLVINLDVLDSVSVFQTMHRHGAEPRILNLQWLHPSRFHHKVNFAAMALSFALFPTLCSGERTAAEVSEIVRRWTIHPLAHQARIGWFQPGIHDDLVQPHTDPEVPVVLYPAIHLTEAKQPKTFLAIVKEVAGRTPLRMEARLAERDLASVLAMRMSSPRWAQVTPLFGRTDEYWESLAHTTAFLATAREEAYGLEYLEALLAGAVGVLPAVSWAQGLVPATYPYLYADNDQAADMLAEVLGDPQAARKAADDSAGGSLSGWITQNHVGSVGDEALRDQIADWFPEAL
>NZ_CP015970.1|WP_062819503.1|1978110_1978800_+|response-regulator-transcription-factor
MTRLLIADDDPQILRALRIILSSKGYQVVTAADGQEALEAAISARPDILIIDLGMPRLDGVALIEAVRGWSQAPILVISGRTTGAEKVRALDVGADDYVTKPFSIDELLARIRAMNRRLPQEQGAPAVHFGDVTVDLAAQAVTRTVDGATRYIRMTPTEWKVLELLARNPGALVTRQTMLLHIWGSDHVTDTGYLRLYLSQLRRKLEPDPSAPRYLLTEPGMGYRLVTD
>NZ_CP015970.1|WP_062820717.1|1975636_1978114_+|DUF4118-domain-containing-protein
MTARGRLRVLLGAAHGVGTTCAMLEEGRRLRDEGRDVVIAAAQAHSRSATDPGAWGLDVVPEAAGRLDTDAVLTRRPDVALVDELAAADPPGSRHLRRWEDVEDLLAGGVDVISTLTIDRVESLSEVAWAITGVPPGGTVPDAVLRAADAVEVVDLAPAALQARLAAGLIGDPRSGGRAFQLDSLIALRELTLMWVADDADQELRRYRDRHGAARSRQIRERVVVALGDEGSAPSLLRRAARLVSGSAGAGPIGVHVSGQRNRPLEDPPALRRLAERLGGSLHEVVGDDVPGAIIDFARSVDATQIVVATAGRGPVGRVLRPGVGEQVARRASGIDVHLVTGSGEATGPLPRPTGALGGVRRLAGFTLAIVAGPLLTWLLVAGPAASSVAVVALAFQLLVVVVALAGGIWPALCSAVGLGVALDYFFTPPLHTFSIHSASHLITVVLSVAIAALVSLIVDRAARQTRAARRSAAESQLLQSASGRVLGGQDAVRALVDQIRESFGMTRARLIRDGEEVASSSAALAGTASGRARAGQWRRSSLPVGEGARLELDGPALDESGQKLLPVITAQLATALDRADLSRAAASGKVRTALLSSLGHDLRRPLASATAAVTGLRSAAGELTGTDRAELLETAAESLSALSGLIEDLVDVRRLETGALAVTMAAVDVEDVIGDALDEAGAGPDQVSLDVEPDLPVLGADAALLRRVLVNLLTNALRHSPGGVELSARRAGGTGVVSEGEDVGDVVELSVADHGPGIDPGRRAEIFMPFQRLGDDDNTTGLGLGLALSKGFVEGMGGTLEPEDTPGGGLTMVVSLHRWPGEDG
>NZ_CP015970.1|WP_062818754.1|1997767_1998883_-|IS630-family-transposase
MPSPKTEPVHLTGEERAVLKSWARGRSLEAWRARRARIILELDGGATIGRVAELVGCSRTTVGKWRARFAADRIDGLEDAPRSGRPRAVSDEQVQALVDRTLHSKPANGDRAWSTRSAAQAAGMSQSTVSRVWRAFGLKPQAIDSWKLSTDPDFVDKVRDVVGLYMNPPENALVLAVDEKTQIQALDRTAPILPVLPTSPAKASHDYVRHGTTSLFAALDVASGSVITEHHARHTAAQFIGFLATIDKAVPKNLELHLVLDNYATHKTAKVHTWLLRHPRFHLHFTPTYSSWLNLVERWFAELTCRKLHGSAHRSVTELKADIQAWINQWNTDPKPFIWTKTADAIFESLAAYCTILNHTTDQPETSDSGH
>NZ_CP015970.1|WP_062819513.1|2000408_2001716_-|ISL3-family-transposase
MNHATFGAPDLTTFARLDELGLEVTGQLISAEETVLACRVVETDEWCHRCGCQGVPRDTVGRRLAHTPFGHRPTILAVRVRRYRCTGCGRVWRQNTDQAAQARAKLSRGGLAWALEGLVLDHLPVSRIAASLGVDWTTANDAVLAEGTRRLIDDPGRFDGVEVIGVDEHVWRHTRGGDKYVTVIIDLTPARDGTGASRLLDMVAGRSKKVFKTWLAGRDQAWRDRIEVVAMDGFTGFKTAAAEELPDAVEVMDPFHVVQLAGDQLDVTRQRVQQDTTGHRGRRGDPLFGVRLTLHTGRDLLTDRQAARLDAVLADDAHAPVQVTWAVYQEVVAAYRAENRAEGRAIMAHLIDAIATKVPAALPEVITLGHTLKKRAADILAYFDHPGTSNGPSEAINGRLEHLRGIALGFRNLTHYITRSLLETGGFRPRLHPGS
>NZ_CP015970.1|WP_082815946.1|2001843_2002422_-|extracellular-solute-binding-protein
MATPIARRTVLGAGLAAVLAGCGGKKTATSSGSGGVTTLTYWSSLRGSDGVVAKFNESHPNIHVRLTDTPAGASGTNAKIYNAFKAGNAPDLITLEQADVTQFALDGVLADITNRVSEDTLSKLSPQAVGWATFAGRTYALPTDVEPFVMFYNKTLLEKYGLDVPTTWDEYRSMGQTLQKKTGGKVKPALQD
>NZ_CP015970.1|WP_062819515.1|2002732_2003854_+|DeoR/GlpR-family-transcriptional-regulator
MSSTRELPATRRERILAMVKQKGFTRIAEVAETLGISPITARRDIAQLTADGLVQQERGGARALPGTAPEPQSHPGTGIPAGATVGLIVPSLRYYWPAVVRGVGAAADSLGVRLLIQSSAYRPEDSLRQARSMVGDGIVSGLLLAPEVPPTPGVEAHEDLLAFLETIELPTVLVERALRPHGSHGRTLDSASSDHRMGGIIAARHLADLGHKHVALFSHRSTPTQFPMRKGWEEAVDDLGLDSFSRTTSASFPPTPGTEAAGVSDVDRFIDECVKRGTTALLAHSDELALTVVQRLMHRGLRVPADISVIAYDDEVAALARPALTAIAPPKEAIGDMALRMLVERIGGSERPITSVELQPSLIDRGSTAPPGA
>NZ_CP015970.1|WP_062819516.1|2004179_2004818_+|SIS-domain-containing-protein
MLTHPDLQRLPGALEASRTSVELESRALRGLWERNEGALRVAVEAIAGISGRLVVCGLGKSGHIGKKVAASMASMGIPSFFLHATEALHGDFGMCTGQDAGLLISSSGTTKEVVEVAGMMRLIGMPVVTMSSNDTSPLAQLGCANLNISVERESDPLNLAPTSSAVTTLVLGDALAVALQGLLDFTEEDFGMRHPGGALGRRVLAERGFDHA
>NZ_CP015970.1|WP_062819517.1|2004810_2005788_+|ribokinase
MPDPTRKGLCIVGSFMMDLIAYADRQPQPGETLVGYDFVQAPGGKGFNQALAGARAGAQTSMIGRLGTDPFGDEFVDRLRAEGIDCRGVIRDAQVGTGVGHPTVARNGQNAIVIVPRSNSAMTVEDIAVHRDVIAAAAVLLLQLELPMPAVMEAARIAHDAGTTVILNPAPFSPLSEQVLEPCDIVIPNEVELSQWAGQPLDTVEAIRETADALAVQHNLTIIATLGERGSLIVSPGRPVEDIAPFPVTAVDTVGAGDAFCGYLAALLSEGSDLVDAVQTASAAAAISVTRKGGSTAPTFAETVEFLATAGNPSPSTPITTRTAS
>NZ_CP015970.1|WP_062819518.1|2005784_2006867_+|DUF2961-domain-containing-protein
MSGYGSHGSSLRDLARLRDTRRSRASSYDRSGGNADWLPLHAGQTAALADITGAGSVNHIWITCAPEVPPSPNSTDNDFLRKLVLRAYWDGSEHPSINVPLGDFFGIGHARTKNFSSLPLQMSPEDGKAFNCWFPMPFADGAKFEIVNECDEMELRFYYYIDYEEYDSLEDGMGRFHACWNHDTPASSLADPSAGSNEEFLFSGKNTTGDDNYVILDAVGRGHYVGCVLNITNTRHTSQWNWYGEGDDMIFVDDEPWPPRIHGTGTEDYFNTAWCPTQEYESLYHGLTLPGGPNWSGQISTYRFHIEDPITFTRSIRMTIEHGHANHRSDALSSTAYWYSDRTDDVIPLAPVADRLPRIA
>NZ_CP015970.1|WP_062819519.1|2006874_2008059_+|DUF4185-domain-containing-protein
MNSKTAHTAITRRSALVLGAGLAAAAASQTVACAQPAREPVPAHSPTRGRFLVNGVRNVRRIAKLTGPDAMNDTLKVGFEGGDLGSMFTAGHRTYFLFGDNFADRAPGQTGGGGGIWHSNALAWTTDTNPADGIRLDGWVTDVNGKAAEILPGKHEPDNTGEVTKIPTQGWAIGHTLYAAYMSVRHWRAAGEWDANEARLARSTDTGRTWTILRDAAWPGTSGFVQLAHAEVVSEGRRWMYQWGIPSGRFGPIRLMRMPYSTGGVENPRHWQYFAGLDRRRRPHWSSRLSDAQIVLDRKSAELSVLWSPRLRRWLLTTMDANSPAVLYEGINPWGPWSEPHTILTQEQCPGLYGPYTDPRYVSHDGTRIYFTLSIWDPYNVFWYSMDLIDARRR
>NZ_CP015970.1|WP_062819520.1|2008211_2009579_+|extracellular-solute-binding-protein
MSTNISRRGLLGLGLGAAATGLLSACGSGTPGETSSQAAAGKAGATTIEFWHRTFTPVENTWYKNIVKKYNAAQSKVNVHDTEVPADAWDQKMKAAQAAGTAPDIYTHSGFIADAVRDEQLHKLNGIVPDEKLKEILPLAKNVSEIDGTYYAYPLLVEAQCVIFWNKDMLKAAGLDPEKGPKTWDELLAMCAKIKPTLKKGQYCIAPAQDADTFAWATVGQQYNFAGHTALTDDWTKPDISNDGYRNLMTSYKKLWDGGYMPKQALATYLTAQDFGQGKVAFKVSGSWMMSEIGSDYKAMLNKTGVGPFPSASSSIDRTATTLGNFKWVVDAKTKKADAAGEFLAWAIAGDTSNVVDFFEVTQYTKVPVRKSVQDAVAATDGAAKAPWSKIVTDEIAPKAIPEPTYSWDISLAVGTAMESVMKGAKSFEDATKTADAAIAKVIKRDGLAGKAPKK
>NZ_CP015970.1|WP_099092985.1|2009584_2010526_+|sugar-ABC-transporter-permease
MTSISPPATTADPLAENPARHRRFRYRYAKLAYLMLAPAVVLLGIFVIWPAIYAIYLSFQDWSFYKAPSFVGFQNFVNVLTDPLFSDAIVRGLKFVLMTVPIMLVLAFLFSCLVVSVGKKFATVLKVSIYLPTIISTVITSIIFTIIYDYSGGLLNWLIGLFGLDAIPWLGDPKYALKAIAIPAIWLGMGLTSLIMVSAMVDIPEEFYEAASMEGANWWKKTIYITIPQMKNVLLYLLVTDFVASLQQYELPLVMTNGGPLDSTMLPNLFIFSHFRGDPTVGYSIAAALLLFVVLGAISAVIFRVVSSEKSVD

Crispr_ID: NZ_CP015970_5

• CRISPR_ID: NZ_CP015970_5
• CRISPR_location: 1998949-2000362
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 19 spacers
• Cas_protein_info: cas2,cas1,csb3,cas3,csb2gr5,csb1gr7

Consensus repeat of NZ_CP015970_5

Consensus_repeat	Method
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	PILER-CR
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CRISPRCasFinder
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CRT

spacers of NZ_CP015970_5

>5.1|1998985|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
AGCACGCCGTCTCAGCCGCACGCCTACCGCCGCTC
>5.2|1999056|38|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
ACCCAGCTCTCCAGCGAGTCGACCCGTGCGCTCGCCCT
>5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
AAGAAGAGCGAGACGTTCCGGCGGATCGTCAACGCGG
>5.4|1999203|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
TCGCATGGAATGAAATGCGCGGGATGAAACCGGAGTT
>5.5|1999276|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GACGTGGCCCGCGCCGCCGTGCTGCGCTGGATCACCC
>5.6|1999349|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CCCGGGCGGCCAGGACAGAACCCCGCCGCCGTCAC
>5.7|1999420|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
TAGTTGGTGGACCATTCCCACCGCTTCGAATCGTCCT
>5.8|1999493|39|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GGCGAATGCACCACACAGACAGGGAGGAATCGCATGGCA
>5.9|1999568|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT
>5.10|1999639|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
ATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT
>5.11|1999712|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT
>5.12|1999783|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
ATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT
>5.13|1999856|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GGATGGGTCGCCAGCGTCCGCGCCACCCTCCCCAG
>5.14|1999927|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GTGGGATTCGGATATCCCCCCGCATCACACCCGGC
>5.15|1999998|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CGGCGGTGGAATGACCTAGGCCGATCAGCTTGGAC
>5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GACCAGCGCAGGACGGGCGAGCCGGTGCCGACAG
>5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
GCGTCGAGCTGCTCGGTGCGGGCGATGACGGTGGCCC
>5.18|2000212|38|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
TCCCGCCGGAACATCCCGCCCCTCAGGGACTTGGTGCG
>5.19|2000286|41|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT
CCGAGTGCCTTCTTGGCCTGGGCTACCTGTGCCTTCTCGAG

CRISPR arrays and Neighbor proteins around NZ_CP015970_5

CRISPR arrays

The CRISPR arrays of NZ_CP015970_5

>merge|NZ_CP015970|5|1998949-2000362|PILER-CR,CRISPRCasFinder,CRT
ATCGCTCCCCTTTCCAGGGGAGCCCTTTGTTGAGGCAGCACGCCGTCTCAGCCGCACGCCTACCGCCGCTCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCACCCAGCTCTCCAGCGAGTCGACCCGTGCGCTCGCCCTATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGCAAGAAGAGCGAGACGTTCCGGCGGATCGTCAACGCGGATCGCTTTCCTTTCCAGGGGAGCCCTTCGTTGAGGCTCGCATGGAATGAAATGCGCGGGATGAAACCGGAGTTATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGACGTGGCCCGCGCCGCCGTGCTGCGCTGGATCACCCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCCGGGCGGCCAGGACAGAACCCCGCCGCCGTCACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCTAGTTGGTGGACCATTCCCACCGCTTCGAATCGTCCTATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGGCGAATGCACCACACAGACAGGGAGGAATCGCATGGCAATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCAGATCGTTGCACCTAGCGCATCAGGACGCGCGCTATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGCATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTTATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCAGATCGTTGCACCTAGCGCATCAGGACGCGCGCTATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGCATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTTATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGGATGGGTCGCCAGCGTCCGCGCCACCCTCCCCAGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGTGGGATTCGGATATCCCCCCGCATCACACCCGGCATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCGGCGGTGGAATGACCTAGGCCGATCAGCTTGGACATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGACCAGCGCAGGACGGGCGAGCCGGTGCCGACAGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCGCGTCGAGCTGCTCGGTGCGGGCGATGACGGTGGCCCATCGCTCCCCCTTCCAGGGGAGCCCTTCGTTGAGGCTCCCGCCGGAACATCCCGCCCCTCAGGGACTTGGTGCGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGCCCGAGTGCCTTCTTGGCCTGGGCTACCTGTGCCTTCTCGAGATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC

>NZ_CP015970|5|3|1998949-2000362|PILER-CR
ATCGCTCCCCTTTCCAGGGGAGCCCTTTGTTGAGGC	AGCACGCCGTCTCAGCCGCACGCCTACCGCCGCTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACCCAGCTCTCCAGCGAGTCGACCCGTGCGCTCGCCCT
ATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGC	AAGAAGAGCGAGACGTTCCGGCGGATCGTCAACGCGG
ATCGCTTTCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCGCATGGAATGAAATGCGCGGGATGAAACCGGAGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACGTGGCCCGCGCCGCCGTGCTGCGCTGGATCACCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCCGGGCGGCCAGGACAGAACCCCGCCGCCGTCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAGTTGGTGGACCATTCCCACCGCTTCGAATCGTCCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGCGAATGCACCACACAGACAGGGAGGAATCGCATGGCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT
ATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT
ATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGATGGGTCGCCAGCGTCCGCGCCACCCTCCCCAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGGGATTCGGATATCCCCCCGCATCACACCCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGCGGTGGAATGACCTAGGCCGATCAGCTTGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCAGCGCAGGACGGGCGAGCCGGTGCCGACAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCGAGCTGCTCGGTGCGGGCGATGACGGTGGCCC
ATCGCTCCCCCTTCCAGGGGAGCCCTTCGTTGAGGC	TCCCGCCGGAACATCCCGCCCCTCAGGGACTTGGTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGAGTGCCTTCTTGGCCTGGGCTACCTGTGCCTTCTCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC

>NZ_CP015970|5|5|1998949-2000362|CRISPRCasFinder
ATCGCTCCCCTTTCCAGGGGAGCCCTTTGTTGAGGC	AGCACGCCGTCTCAGCCGCACGCCTACCGCCGCTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACCCAGCTCTCCAGCGAGTCGACCCGTGCGCTCGCCCT
ATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGC	AAGAAGAGCGAGACGTTCCGGCGGATCGTCAACGCGG
ATCGCTTTCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCGCATGGAATGAAATGCGCGGGATGAAACCGGAGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACGTGGCCCGCGCCGCCGTGCTGCGCTGGATCACCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCCGGGCGGCCAGGACAGAACCCCGCCGCCGTCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAGTTGGTGGACCATTCCCACCGCTTCGAATCGTCCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGCGAATGCACCACACAGACAGGGAGGAATCGCATGGCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT
ATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT
ATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGATGGGTCGCCAGCGTCCGCGCCACCCTCCCCAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGGGATTCGGATATCCCCCCGCATCACACCCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGCGGTGGAATGACCTAGGCCGATCAGCTTGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCAGCGCAGGACGGGCGAGCCGGTGCCGACAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCGAGCTGCTCGGTGCGGGCGATGACGGTGGCCC
ATCGCTCCCCCTTCCAGGGGAGCCCTTCGTTGAGGC	TCCCGCCGGAACATCCCGCCCCTCAGGGACTTGGTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGAGTGCCTTCTTGGCCTGGGCTACCTGTGCCTTCTCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC

>NZ_CP015970|5|2|1998949-2000362|CRT
ATCGCTCCCCTTTCCAGGGGAGCCCTTTGTTGAGGC	AGCACGCCGTCTCAGCCGCACGCCTACCGCCGCTC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	ACCCAGCTCTCCAGCGAGTCGACCCGTGCGCTCGCCCT
ATCGCTCCCATTTCCAGGGGAGCCCTTCGTTGAGGC	AAGAAGAGCGAGACGTTCCGGCGGATCGTCAACGCGG
ATCGCTTTCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TCGCATGGAATGAAATGCGCGGGATGAAACCGGAGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACGTGGCCCGCGCCGCCGTGCTGCGCTGGATCACCC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCCGGGCGGCCAGGACAGAACCCCGCCGCCGTCAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	TAGTTGGTGGACCATTCCCACCGCTTCGAATCGTCCT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGCGAATGCACCACACAGACAGGGAGGAATCGCATGGCA
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT
ATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CAGATCGTTGCACCTAGCGCATCAGGACGCGCGCT
ATCGCTCCTCTTTCCAGGGGAGCCCTTCGTTGAGGC	ATGAGCTTGGGCTGCCCGTTGGACCAGAAGGCGGGTT
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GGATGGGTCGCCAGCGTCCGCGCCACCCTCCCCAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GTGGGATTCGGATATCCCCCCGCATCACACCCGGC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CGGCGGTGGAATGACCTAGGCCGATCAGCTTGGAC
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GACCAGCGCAGGACGGGCGAGCCGGTGCCGACAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	GCGTCGAGCTGCTCGGTGCGGGCGATGACGGTGGCCC
ATCGCTCCCCCTTCCAGGGGAGCCCTTCGTTGAGGC	TCCCGCCGGAACATCCCGCCCCTCAGGGACTTGGTGCG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC	CCGAGTGCCTTCTTGGCCTGGGCTACCTGTGCCTTCTCGAG
ATCGCTCCCCTTTCCAGGGGAGCCCTTCGTTGAGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062818754.1|1997767_1998883_-|IS630-family-transposase	unknown	unknown	gnl|CDD|315923
NZ_CP015970.1|WP_062819517.1|2004810_2005788_+|ribokinase	unknown	unknown	gnl|CDD|238579
NZ_CP015970.1|WP_062819516.1|2004179_2004818_+|SIS-domain-containing-protein	unknown	unknown	gnl|CDD|129488
NZ_CP015970.1|WP_062819512.1|1991815_1992115_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP015970.1|WP_062819508.1|1985025_1986609_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl|CDD|274005
NZ_CP015970.1|WP_062819518.1|2005784_2006867_+|DUF2961-domain-containing-protein	unknown	unknown	gnl|CDD|378582
NZ_CP015970.1|WP_062819507.1|1983814_1985023_+|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl|CDD|378223
NZ_CP015970.1|WP_082815947.1|2010572_2011421_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP015970.1|WP_062819503.1|1978110_1978800_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP015970.1|WP_082815946.1|2001843_2002422_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270451
NZ_CP015970.1|WP_062819520.1|2008211_2009579_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270451
NZ_CP015970.1|WP_062819509.1|1986605_1989233_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl|CDD|274235
NZ_CP015970.1|WP_062819511.1|1990214_1991819_+|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NZ_CP015970.1|WP_062819504.1|1978813_1979881_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062819513.1|2000408_2001716_-|ISL3-family-transposase	unknown	unknown	gnl|CDD|376574
NZ_CP015970.1|WP_062819505.1|1980021_1980672_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062819510.1|1989229_1990228_+|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl|CDD|187733
NZ_CP015970.1|WP_062819515.1|2002732_2003854_+|DeoR/GlpR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380491
NZ_CP015970.1|WP_062819519.1|2006874_2008059_+|DUF4185-domain-containing-protein	unknown	unknown	gnl|CDD|379383
NZ_CP015970.1|WP_099092985.1|2009584_2010526_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP015970.1|WP_062819509.1|1986605_1989233_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	3.6e-91	300.9	0.0
NZ_CP015970.1|WP_062819512.1|1991815_1992115_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	4.8e-21	69.5	0.0
NZ_CP015970.1|WP_062819508.1|1985025_1986609_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	9.1e-83	273.5	11.3
NZ_CP015970.1|WP_062819507.1|1983814_1985023_+|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	6.6e-16	53.5	0.0
NZ_CP015970.1|WP_062819511.1|1990214_1991819_+|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	7.8e-81	266.2	0.0
NZ_CP015970.1|WP_062819510.1|1989229_1990228_+|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	1.4e-83	275.6	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_062818754.1|1997767_1998883_-|IS630-family-transposase	gnl|CDD|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.36081e-15
NZ_CP015970.1|WP_062819517.1|2004810_2005788_+|ribokinase	gnl|CDD|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	2.56321e-109
NZ_CP015970.1|WP_062819516.1|2004179_2004818_+|SIS-domain-containing-protein	gnl|CDD|129488	TIGR00393, Probable_arabinose_5-phosphate_isomerase, KpsF/GutQ family protein. This model describes a number of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. One is GutQ, a protein of the glucitol operon. Another is KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of E. coli. [Energy metabolism, Sugars].	2.73284e-57
NZ_CP015970.1|WP_062819512.1|1991815_1992115_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.33933e-21
NZ_CP015970.1|WP_062819508.1|1985025_1986609_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl|CDD|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	4.98328e-77
NZ_CP015970.1|WP_062819518.1|2005784_2006867_+|DUF2961-domain-containing-protein	gnl|CDD|378582	pfam11175, DUF2961, Protein of unknown function (DUF2961). This family of proteins has no known function.	7.6354e-115
NZ_CP015970.1|WP_062819507.1|1983814_1985023_+|type-I-U-CRISPR-associated-protein-Cas7	gnl|CDD|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	5.45116e-28
NZ_CP015970.1|WP_082815947.1|2010572_2011421_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.02022e-65
NZ_CP015970.1|WP_062819503.1|1978110_1978800_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.64561e-71
NZ_CP015970.1|WP_082815946.1|2001843_2002422_-|extracellular-solute-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.03518e-34
NZ_CP015970.1|WP_062819520.1|2008211_2009579_+|extracellular-solute-binding-protein	gnl|CDD|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.28873e-52
NZ_CP015970.1|WP_062819509.1|1986605_1989233_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	3.66478e-85
NZ_CP015970.1|WP_062819511.1|1990214_1991819_+|CRISPR-associated-endonuclease-Cas4/Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	7.25226e-94
NZ_CP015970.1|WP_062819513.1|2000408_2001716_-|ISL3-family-transposase	gnl|CDD|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	8.38752e-74
NZ_CP015970.1|WP_099092985.1|2009584_2010526_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.50492e-69
NZ_CP015970.1|WP_062819510.1|1989229_1990228_+|hypothetical-protein	gnl|CDD|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	1.26451e-82
NZ_CP015970.1|WP_062819515.1|2002732_2003854_+|DeoR/GlpR-family-transcriptional-regulator	gnl|CDD|380491	cd06267, PBP1_LacI_sugar_binding-like, ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. Ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. In most cases, ligands are monosaccharide including lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. The LacI family of proteins consists of transcriptional regulators related to the lac repressor. In this case, the domain sugar binding changes the DNA binding activity of the repressor domain.	1.27346e-48
NZ_CP015970.1|WP_062819519.1|2006874_2008059_+|DUF4185-domain-containing-protein	gnl|CDD|379383	pfam13810, DUF4185, Domain of unknown function (DUF4185).	9.03125e-82

Protein sequences

>NZ_CP015970.1|WP_062818754.1|1997767_1998883_-|IS630-family-transposase
MPSPKTEPVHLTGEERAVLKSWARGRSLEAWRARRARIILELDGGATIGRVAELVGCSRTTVGKWRARFAADRIDGLEDAPRSGRPRAVSDEQVQALVDRTLHSKPANGDRAWSTRSAAQAAGMSQSTVSRVWRAFGLKPQAIDSWKLSTDPDFVDKVRDVVGLYMNPPENALVLAVDEKTQIQALDRTAPILPVLPTSPAKASHDYVRHGTTSLFAALDVASGSVITEHHARHTAAQFIGFLATIDKAVPKNLELHLVLDNYATHKTAKVHTWLLRHPRFHLHFTPTYSSWLNLVERWFAELTCRKLHGSAHRSVTELKADIQAWINQWNTDPKPFIWTKTADAIFESLAAYCTILNHTTDQPETSDSGH
>NZ_CP015970.1|WP_062819512.1|1991815_1992115_+|CRISPR-associated-endonuclease-Cas2
MRQDSHRFLVAYDIPDDRRRSHMAIALKRFGLRVQYSVFMVDCSPSHVLVLQRELEDIMDRDQDSVLVSDLGLSKTADARAMTWLGHSRYIVGDGTMIV
>NZ_CP015970.1|WP_062819511.1|1990214_1991819_+|CRISPR-associated-endonuclease-Cas4/Cas1
MDSDDTIPISLIAHTVFCPRRAWLEAQGEQVDSFAITAGTMAHKRVDNASESRPGVERAMLIHSDELGLTGRCDVVKEHDDDSLEVIEYKSTPSRRRAEITESQRIQVIAQAMCLEEMGYHVTSAGVYFTNHHTQVPVLIDNDARTECREWVQRTRELIGSFHAPEPLLDDPRCVGCSHAAVCLPDENRHTEGQKARSISVSDPDGTILHIVTPGARASLRQGRVTVSKAGEELASVPLEKVCGIVVHGNVDLSSALVREMLWRRLTVVWCSGRGRVIGWASSAESPNGQPRVHLHSMSELGCLPIAQQVIRAKIGNQATLLRRNGDCPGLVTELRSLSRATADMPSLPELFALEGRAAQSYFSGFPSMLKGGESDAFLREWPGRHGRGATDPLNAAMNFTYSLLLSDCIRALVACGLDPHAGFLHSPSRNKPALALDLMEEFRAPIADSVILTCINNGALTTDMFTHTLGDSRLTAQGRNAIVSAYEHRVTTEISHPTFGYTVSWRRTIEVQARIILGVVDGTRADYKGMTVR
>NZ_CP015970.1|WP_062819510.1|1989229_1990228_+|hypothetical-protein
MNIELGGGLNSALTHFALVGLAAILEEAGATKVRLGWTAEGVAKARITWEGPEAGDAVKGHAERHADEGSWVQAKGLEGDTGLFSPRIKVPKAVDGWIDLEGRREAILDSGLTELDARMVSNLGEPGYWVVDNRENQPDRAASRWEMKTRNRGEEFIGKRLAPLAAIVAARPASSITDGLTGASTTDRAGKDSPGSRTSTGLTPPGPTDDALAWCGLWGISSFALVPAVSKVSATSGASPLRALHPRRALIPVADHMLSPAAWRALMASRAVNDLASADTERQSAAVAELPLRGVIGACDFTVHKGGSSSAPERMILSGEFHLLEYFLYGLR
>NZ_CP015970.1|WP_062819509.1|1986605_1989233_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTFTVSDFPRFFAAVNGGHRPFPWQMRLIDSIITEGRWPAAITAPTGSGKSAVVETHIFLTALNAVGAAPRLPRRLCVVVDRRALVDSQADRAARVLSWLETSSDALAAEMAGALRSLSLSPDSPPVVLANLRGGIATDRRWIDDPGACAVISATPDMWGSRLLMRGYGTSPAARPREAGLLGVDSVVVIDEAHLSRQLLGTARWVAGHAGEKASAIGVPALQVVESSATARVDEGGTAIGISAEDLADPGLAPRMTRPKPVRFLESPDWSGKKGSKKYVETLAEEANRLYDPQICGTVGCIVNRIDTALRLAEALGDDCPCWVGPMRPMDLTALKADYPGLFGLPDDGTHTTPRFLVATQTVEVGIDVDFVALVTELAPASSLAQRFGRVNRKGARDSGPITVVGPPERAVKDQLPYLQEDLRAGLTWLHDLDGPGGASPESIMACPPPPTLPERPIVKLPHVGDVMRWEATDDAMVADEELELWIRDSLQPDQLQAGLVVRSPLPDDDALAISLLTATPPSEDEVFPVALWKLRSVLTTLSERHGDHDRAFVLRDDEVNDIRLDDDPVDIRAGDVVFVDSGHALTRKGVVVTDASRPEALKTLWGTASTRVIVDGLPGAHWLEDLCGLEDDEAQRAFTDAAENGLITRGPDLIEGVRLSWIVVKGTEEIKDDDSIRQVWTPSEGLVTLEAHQDGVACRAGHLCDTIGITATLRDDLVAAGLHHDDGKADPRFQKYRLNAPDGSEPLAKSPARSAQDVSRRRWSSGLPRGWRHELRSVAVAWPAIEESDDPELVARLIGTSHGRGRVLPQPNASSLINEQRDDDALKNRIMDLFVEGEWCSLMGRTSWRLGAWTCCYLEAVLRAADCRVSKEGS
>NZ_CP015970.1|WP_062819508.1|1985025_1986609_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MPPLTIRAHFPLGTFQGHAEDGSPSRLPDTARLYSALINAAGNGSQAEPRKGQLRISSESAAALSWMERHPPTELMVPEYVPAFSGVTSYRDEGTAEKPPSASPRIRKSARTINTATALAGPFGWFWEDAPPNVQETIGRLCEDVSCLGESDSPVVLTLEPIEATHKIVTEPSELHPRGILIRTPSPGRLDELERAWETDHPKKLPTKANDRPKVAERPAGSKIPMAALRTLQYERPTLPPPREPWPFAFLIPISRDSRAPQPNAAIDWCVATHRMLVARMGDAAPASITGNYPRDVLSPANRVAIQYIPRSYMPEQKLTGQAGDGFPNGALLVLLPAGLPPEDRIQIGNALNAPNLRVWIRAADGPTRTLELGESSLISLHDFWPEIRPGWRRTWRSARGLVPETRRQPDDPELGRWGFEQAALLSLYHVFRDHLPDLPRRDYWSMIRAVTDKKEGAAKVLSTHLIADSHVNRYAHKAPRSIGAVQPYDAEFDLGHLVGGRALIAVGQSRHLGGGLLVPVDTPEES
>NZ_CP015970.1|WP_062819507.1|1983814_1985023_+|type-I-U-CRISPR-associated-protein-Cas7
MDTLTYTDVESACRAGGATVLSSVTDLVPAAGPHAGIAPARYVSGRNATYAYETRYIDGAAQSVVDIDGKASQLNRIEDAIALAIQEGDPGLTRMPSIRVTYEGHPEYTSFEYQLPHRYTDGHVRFGTHDGLPVTESPAFIAARNATPADATALLELSPVSLVLGSWDSTRKAHQARYRSCATGEIIGVLADQGEHGRKPSPRGAARKDDLAPSVQLTEKDMLALLKTQETEMSSKTVENIKKKAKDAKSGKTSASVLGLGSIPPSLDALGLVSCSRIIRSHVLTFSALRQIRFGNDNDANVACRALLAALALHGIALADEELSLRANCDLREAGETQVALDGRRGTQREIAPLTRDVTGPLLIAAIDAAQAKAGIRWEGQVFEVIGNPIILGGIDADADED
>NZ_CP015970.1|WP_062819505.1|1980021_1980672_-|hypothetical-protein
MAGNLRGDARATIAAGLDSALDKQRPVAVANVARLRQLHPDKTAEELVAYFENWYLGTVSFGDVAVDRTVSGPDGVVEMPAALGDFLAYVDASVLFILEAAEVQGLVPEDHDRRKLLVLSALVGDADGKALEPLIGEVGPLWGPKIVDGIPLEAVVAANETLGSRIDTTWGDTGAPVPGRHAAVKVTVDADGDGDGLFGWRAVTSARKILGPARAQ
>NZ_CP015970.1|WP_062819504.1|1978813_1979881_-|hypothetical-protein
MTIAIKYGFLEEDPVVDDHGRFIARGAGAVFVQRLFEIYPDAVLVGDQDRHCDSFEMRSLTSLDAESDLVINLDVLDSVSVFQTMHRHGAEPRILNLQWLHPSRFHHKVNFAAMALSFALFPTLCSGERTAAEVSEIVRRWTIHPLAHQARIGWFQPGIHDDLVQPHTDPEVPVVLYPAIHLTEAKQPKTFLAIVKEVAGRTPLRMEARLAERDLASVLAMRMSSPRWAQVTPLFGRTDEYWESLAHTTAFLATAREEAYGLEYLEALLAGAVGVLPAVSWAQGLVPATYPYLYADNDQAADMLAEVLGDPQAARKAADDSAGGSLSGWITQNHVGSVGDEALRDQIADWFPEAL
>NZ_CP015970.1|WP_062819503.1|1978110_1978800_+|response-regulator-transcription-factor
MTRLLIADDDPQILRALRIILSSKGYQVVTAADGQEALEAAISARPDILIIDLGMPRLDGVALIEAVRGWSQAPILVISGRTTGAEKVRALDVGADDYVTKPFSIDELLARIRAMNRRLPQEQGAPAVHFGDVTVDLAAQAVTRTVDGATRYIRMTPTEWKVLELLARNPGALVTRQTMLLHIWGSDHVTDTGYLRLYLSQLRRKLEPDPSAPRYLLTEPGMGYRLVTD
>NZ_CP015970.1|WP_062819513.1|2000408_2001716_-|ISL3-family-transposase
MNHATFGAPDLTTFARLDELGLEVTGQLISAEETVLACRVVETDEWCHRCGCQGVPRDTVGRRLAHTPFGHRPTILAVRVRRYRCTGCGRVWRQNTDQAAQARAKLSRGGLAWALEGLVLDHLPVSRIAASLGVDWTTANDAVLAEGTRRLIDDPGRFDGVEVIGVDEHVWRHTRGGDKYVTVIIDLTPARDGTGASRLLDMVAGRSKKVFKTWLAGRDQAWRDRIEVVAMDGFTGFKTAAAEELPDAVEVMDPFHVVQLAGDQLDVTRQRVQQDTTGHRGRRGDPLFGVRLTLHTGRDLLTDRQAARLDAVLADDAHAPVQVTWAVYQEVVAAYRAENRAEGRAIMAHLIDAIATKVPAALPEVITLGHTLKKRAADILAYFDHPGTSNGPSEAINGRLEHLRGIALGFRNLTHYITRSLLETGGFRPRLHPGS
>NZ_CP015970.1|WP_082815946.1|2001843_2002422_-|extracellular-solute-binding-protein
MATPIARRTVLGAGLAAVLAGCGGKKTATSSGSGGVTTLTYWSSLRGSDGVVAKFNESHPNIHVRLTDTPAGASGTNAKIYNAFKAGNAPDLITLEQADVTQFALDGVLADITNRVSEDTLSKLSPQAVGWATFAGRTYALPTDVEPFVMFYNKTLLEKYGLDVPTTWDEYRSMGQTLQKKTGGKVKPALQD
>NZ_CP015970.1|WP_062819515.1|2002732_2003854_+|DeoR/GlpR-family-transcriptional-regulator
MSSTRELPATRRERILAMVKQKGFTRIAEVAETLGISPITARRDIAQLTADGLVQQERGGARALPGTAPEPQSHPGTGIPAGATVGLIVPSLRYYWPAVVRGVGAAADSLGVRLLIQSSAYRPEDSLRQARSMVGDGIVSGLLLAPEVPPTPGVEAHEDLLAFLETIELPTVLVERALRPHGSHGRTLDSASSDHRMGGIIAARHLADLGHKHVALFSHRSTPTQFPMRKGWEEAVDDLGLDSFSRTTSASFPPTPGTEAAGVSDVDRFIDECVKRGTTALLAHSDELALTVVQRLMHRGLRVPADISVIAYDDEVAALARPALTAIAPPKEAIGDMALRMLVERIGGSERPITSVELQPSLIDRGSTAPPGA
>NZ_CP015970.1|WP_062819516.1|2004179_2004818_+|SIS-domain-containing-protein
MLTHPDLQRLPGALEASRTSVELESRALRGLWERNEGALRVAVEAIAGISGRLVVCGLGKSGHIGKKVAASMASMGIPSFFLHATEALHGDFGMCTGQDAGLLISSSGTTKEVVEVAGMMRLIGMPVVTMSSNDTSPLAQLGCANLNISVERESDPLNLAPTSSAVTTLVLGDALAVALQGLLDFTEEDFGMRHPGGALGRRVLAERGFDHA
>NZ_CP015970.1|WP_062819517.1|2004810_2005788_+|ribokinase
MPDPTRKGLCIVGSFMMDLIAYADRQPQPGETLVGYDFVQAPGGKGFNQALAGARAGAQTSMIGRLGTDPFGDEFVDRLRAEGIDCRGVIRDAQVGTGVGHPTVARNGQNAIVIVPRSNSAMTVEDIAVHRDVIAAAAVLLLQLELPMPAVMEAARIAHDAGTTVILNPAPFSPLSEQVLEPCDIVIPNEVELSQWAGQPLDTVEAIRETADALAVQHNLTIIATLGERGSLIVSPGRPVEDIAPFPVTAVDTVGAGDAFCGYLAALLSEGSDLVDAVQTASAAAAISVTRKGGSTAPTFAETVEFLATAGNPSPSTPITTRTAS
>NZ_CP015970.1|WP_062819518.1|2005784_2006867_+|DUF2961-domain-containing-protein
MSGYGSHGSSLRDLARLRDTRRSRASSYDRSGGNADWLPLHAGQTAALADITGAGSVNHIWITCAPEVPPSPNSTDNDFLRKLVLRAYWDGSEHPSINVPLGDFFGIGHARTKNFSSLPLQMSPEDGKAFNCWFPMPFADGAKFEIVNECDEMELRFYYYIDYEEYDSLEDGMGRFHACWNHDTPASSLADPSAGSNEEFLFSGKNTTGDDNYVILDAVGRGHYVGCVLNITNTRHTSQWNWYGEGDDMIFVDDEPWPPRIHGTGTEDYFNTAWCPTQEYESLYHGLTLPGGPNWSGQISTYRFHIEDPITFTRSIRMTIEHGHANHRSDALSSTAYWYSDRTDDVIPLAPVADRLPRIA
>NZ_CP015970.1|WP_062819519.1|2006874_2008059_+|DUF4185-domain-containing-protein
MNSKTAHTAITRRSALVLGAGLAAAAASQTVACAQPAREPVPAHSPTRGRFLVNGVRNVRRIAKLTGPDAMNDTLKVGFEGGDLGSMFTAGHRTYFLFGDNFADRAPGQTGGGGGIWHSNALAWTTDTNPADGIRLDGWVTDVNGKAAEILPGKHEPDNTGEVTKIPTQGWAIGHTLYAAYMSVRHWRAAGEWDANEARLARSTDTGRTWTILRDAAWPGTSGFVQLAHAEVVSEGRRWMYQWGIPSGRFGPIRLMRMPYSTGGVENPRHWQYFAGLDRRRRPHWSSRLSDAQIVLDRKSAELSVLWSPRLRRWLLTTMDANSPAVLYEGINPWGPWSEPHTILTQEQCPGLYGPYTDPRYVSHDGTRIYFTLSIWDPYNVFWYSMDLIDARRR
>NZ_CP015970.1|WP_062819520.1|2008211_2009579_+|extracellular-solute-binding-protein
MSTNISRRGLLGLGLGAAATGLLSACGSGTPGETSSQAAAGKAGATTIEFWHRTFTPVENTWYKNIVKKYNAAQSKVNVHDTEVPADAWDQKMKAAQAAGTAPDIYTHSGFIADAVRDEQLHKLNGIVPDEKLKEILPLAKNVSEIDGTYYAYPLLVEAQCVIFWNKDMLKAAGLDPEKGPKTWDELLAMCAKIKPTLKKGQYCIAPAQDADTFAWATVGQQYNFAGHTALTDDWTKPDISNDGYRNLMTSYKKLWDGGYMPKQALATYLTAQDFGQGKVAFKVSGSWMMSEIGSDYKAMLNKTGVGPFPSASSSIDRTATTLGNFKWVVDAKTKKADAAGEFLAWAIAGDTSNVVDFFEVTQYTKVPVRKSVQDAVAATDGAAKAPWSKIVTDEIAPKAIPEPTYSWDISLAVGTAMESVMKGAKSFEDATKTADAAIAKVIKRDGLAGKAPKK
>NZ_CP015970.1|WP_099092985.1|2009584_2010526_+|sugar-ABC-transporter-permease
MTSISPPATTADPLAENPARHRRFRYRYAKLAYLMLAPAVVLLGIFVIWPAIYAIYLSFQDWSFYKAPSFVGFQNFVNVLTDPLFSDAIVRGLKFVLMTVPIMLVLAFLFSCLVVSVGKKFATVLKVSIYLPTIISTVITSIIFTIIYDYSGGLLNWLIGLFGLDAIPWLGDPKYALKAIAIPAIWLGMGLTSLIMVSAMVDIPEEFYEAASMEGANWWKKTIYITIPQMKNVLLYLLVTDFVASLQQYELPLVMTNGGPLDSTMLPNLFIFSHFRGDPTVGYSIAAALLLFVVLGAISAVIFRVVSSEKSVD
>NZ_CP015970.1|WP_082815947.1|2010572_2011421_+|carbohydrate-ABC-transporter-permease
MTEDRRRPRGWRWWTGGVLKGLVGALFVFLALFPLAWMIIAGFKAKTEVLETPFQFFPEVWHWENYARILSDPTFLRTLGWTFLGTVLFTALSLAVNSMAAYAFARLEFPFKRTLWVTVITTMFIPGMTILLTSFIVVTKLHMLDTLAVLVLPGAASAASIFFIRQFYLNIPRSLEEAAELDGCGAGKIFIRLFLPLSKAPFVVMGITAFLAYWNSYVWPIMTMASPDKYVMQQYLATFRSERSSELGILMAGSAMAAAPVIIMFLVFQKQIIGNIKMAGLK

Crispr_ID: NZ_CP015970_6

• CRISPR_ID: NZ_CP015970_6
• CRISPR_location: 2071483-2071606
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015970_6

Consensus_repeat	Method
CCGACTCGCCGCCCGGGGGTGCAGGGGGTCGGCCCCCGCC	CRISPRCasFinder

spacers of NZ_CP015970_6

>6.1|2071523|44|NZ_CP015970|CRISPRCasFinder
CCCTACACCAGCCCAGAGGCCCGCGCCGCAGACCCGCATCGCGT

CRISPR arrays and Neighbor proteins around NZ_CP015970_6

CRISPR arrays

The CRISPR arrays of NZ_CP015970_6

>merge|NZ_CP015970|6|2071483-2071606|CRISPRCasFinder
CCGACTCGCCGCCCGGGGGTGCAGGGGGTCGGCCCCCGCCCCCTACACCAGCCCAGAGGCCCGCGCCGCAGACCCGCATCGCGTCCGACTCGCCGCCCGGGGGTGCAGGGGGTCGGCCCCCGCC

>NZ_CP015970|6|6|2071483-2071606|CRISPRCasFinder
CCGACTCGCCGCCCGGGGGTGCAGGGGGTCGGCCCCCGCC	CCCTACACCAGCCCAGAGGCCCGCGCCGCAGACCCGCATCGCGT
CCGACTCGCCGCCCGGGGGTGCAGGGGGTCGGCCCCCGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062819561.1|2078239_2080162_+|1,4-alpha-glucan-branching-protein	unknown	unknown	gnl|CDD|200464
NZ_CP015970.1|WP_062820726.1|2068673_2069615_+|HNH-endonuclease	unknown	unknown	gnl|CDD|366837
NZ_CP015970.1|WP_062819563.1|2081362_2083429_+|S9-family-peptidase	unknown	unknown	gnl|CDD|224423
NZ_CP015970.1|WP_157773938.1|2069871_2070075_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_126132914.1|2070365_2070590_-|hypothetical-protein	unknown	unknown	gnl|CDD|183277
NZ_CP015970.1|WP_099093028.1|2073709_2074438_-|tRNA-adenosine-deaminase-associated-protein	unknown	unknown	gnl|CDD|274869
NZ_CP015970.1|WP_028700871.1|2073212_2073656_-|nucleoside-deaminase	unknown	unknown	gnl|CDD|223663
NZ_CP015970.1|WP_082815955.1|2076826_2078131_+|MFS-transporter	unknown	unknown	gnl|CDD|340879
NZ_CP015970.1|WP_062819555.1|2064839_2065520_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224095
NZ_CP015970.1|WP_062819557.1|2070075_2070369_-|hypothetical-protein	unknown	unknown	gnl|CDD|183277
NZ_CP015970.1|WP_062819559.1|2070535_2071030_-|hypothetical-protein	unknown	unknown	gnl|CDD|183277
NZ_CP015970.1|WP_082815953.1|2065516_2066536_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270324
NZ_CP015970.1|WP_062819560.1|2076202_2076724_-|hypothetical-protein	unknown	unknown	gnl|CDD|240137
NZ_CP015970.1|WP_062819562.1|2080200_2081211_-|NADP-dependent-oxidoreductase	unknown	unknown	gnl|CDD|176190
NZ_CP015970.1|WP_028700869.1|2074617_2075244_+|uracil-phosphoribosyltransferase	unknown	unknown	gnl|CDD|234653
NZ_CP015970.1|WP_082815954.1|2075240_2076086_+|hypothetical-protein	unknown	unknown	gnl|CDD|226300
NZ_CP015970.1|WP_062820724.1|2063041_2064205_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224050
NZ_CP015970.1|WP_071001204.1|2071616_2072936_-|lipopolysaccharide-biosynthesis-protein	unknown	unknown	gnl|CDD|225153
NZ_CP015970.1|WP_062819556.1|2066867_2068391_+|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NZ_CP015970.1|WP_062819554.1|2064201_2064843_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|224095

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_062819561.1|2078239_2080162_+|1,4-alpha-glucan-branching-protein	gnl|CDD|200464	cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase). Glycosyltrehalose trehalohydrolase (GTHase) was discovered as part of a coupled system for the production of trehalose from soluble starch. In the first half of the reaction, glycosyltrehalose synthase (GTSase), an intramolecular glycosyl transferase, converts the glycosidic bond between the last two glucose residues of amylose from an alpha-1,4 bond to an alpha-1,1 bond, making a non-reducing glycosyl trehaloside. In the second half of the reaction, GTHase cleaves the alpha-1,4 glycosidic bond adjacent to the trehalose moiety to release trehalose and malto-oligosaccharide. Like isoamylase and other glycosidases that recognize branched oligosaccharides, GTHase contains an N-terminal extension and does not have the conserved calcium ion present in other alpha amylase family enzymes. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase. Glycosyltrehalose Trehalohydrolase Maltooligosyltrehalose Trehalohydrolase.	1.30252e-140
NZ_CP015970.1|WP_062820726.1|2068673_2069615_+|HNH-endonuclease	gnl|CDD|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	1.99717e-13
NZ_CP015970.1|WP_062819563.1|2081362_2083429_+|S9-family-peptidase	gnl|CDD|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	9.7753e-76
NZ_CP015970.1|WP_126132914.1|2070365_2070590_-|hypothetical-protein	gnl|CDD|183277	PRK11689, PRK11689, aromatic amino acid efflux DMT transporter YddG.	1.34769e-19
NZ_CP015970.1|WP_099093028.1|2073709_2074438_-|tRNA-adenosine-deaminase-associated-protein	gnl|CDD|274869	TIGR03941, conserved_hypothetical_protein, putative tRNA adenosine deaminase-associated protein. This model describes a protein family about 200 amino acids in length with only five invariant residues, including an Arg, a Ser-Asp pair, and two Gly residues. Members always are found exclusively in Actinobacteria, and always adjacent to homologs of TadA, a tRNA-specific adenosine deaminase from Escherichia coli. Homology, phyletic pattern, and gene neighborhood together suggest a housekeeping function in tRNA metabolism. [Unknown function, General].	9.30306e-26
NZ_CP015970.1|WP_028700871.1|2073212_2073656_-|nucleoside-deaminase	gnl|CDD|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	2.16838e-55
NZ_CP015970.1|WP_082815955.1|2076826_2078131_+|MFS-transporter	gnl|CDD|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.23768e-67
NZ_CP015970.1|WP_062819555.1|2064839_2065520_+|ABC-transporter-permease	gnl|CDD|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	1.8364e-52
NZ_CP015970.1|WP_062819557.1|2070075_2070369_-|hypothetical-protein	gnl|CDD|183277	PRK11689, PRK11689, aromatic amino acid efflux DMT transporter YddG.	8.20333e-28
NZ_CP015970.1|WP_062819559.1|2070535_2071030_-|hypothetical-protein	gnl|CDD|183277	PRK11689, PRK11689, aromatic amino acid efflux DMT transporter YddG.	1.1724e-44
NZ_CP015970.1|WP_082815953.1|2065516_2066536_+|ABC-transporter-substrate-binding-protein	gnl|CDD|270324	cd13606, PBP2_ProX_like, Bacterial substrate-binding protein ProX of ABC-type osmoregulated transporter and its related proteins; the type 2 periplasmic-binding protein fold. This group includes periplasmic substrate-binding component of ABC transport systems from gram-negative and -positive bacteria that are involved in uptake of osmoprotectants (also termed compatible solutes) such as betaine, choline, proline betaine, carnitine, and L-proline. To counteract the efflux of water, many microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.45307e-130
NZ_CP015970.1|WP_062819560.1|2076202_2076724_-|hypothetical-protein	gnl|CDD|240137	cd04939, PA2301, PA2301 is an uncharacterized Pseudomonas aeruginosa protein with a YbaK-like domain of unknown function. The YbaK-like domain family includes the INS amino acid-editing domain of the bacterial class II prolyl tRNA synthetase (ProRS), and it's trans-acting homologs, YbaK, and ProX. The primary function of INS is to hydrolyze mischarged cysteinyl-tRNA(Pro)'s, thus helping ensure the fidelity of translation. Organisms whose ProRS lacks the INS domain express a single-domain INS homolog such as YbaK, ProX, or PrdX which supplies the function of INS in trans.	3.90765e-70
NZ_CP015970.1|WP_062819562.1|2080200_2081211_-|NADP-dependent-oxidoreductase	gnl|CDD|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	1.47178e-160
NZ_CP015970.1|WP_028700869.1|2074617_2075244_+|uracil-phosphoribosyltransferase	gnl|CDD|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	1.76945e-115
NZ_CP015970.1|WP_082815954.1|2075240_2076086_+|hypothetical-protein	gnl|CDD|226300	COG3777, COG3777, Uncharacterized conserved protein [Function unknown].	4.15277e-33
NZ_CP015970.1|WP_062820724.1|2063041_2064205_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	8.48636e-133
NZ_CP015970.1|WP_071001204.1|2071616_2072936_-|lipopolysaccharide-biosynthesis-protein	gnl|CDD|225153	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only].	1.72534e-15
NZ_CP015970.1|WP_062819556.1|2066867_2068391_+|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.15232e-39
NZ_CP015970.1|WP_062819554.1|2064201_2064843_+|ABC-transporter-permease	gnl|CDD|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	4.86717e-38

Protein sequences

>NZ_CP015970.1|WP_062819559.1|2070535_2071030_-|hypothetical-protein
MRAESIVVWKRDLMASTPQAVQSRRATAIGVAAILLWSGIVGLIRVTTQHFGATLGPSLIYTLAAALLWLTRRPKSLRGFSARYLLLGVGMFVIYEVALAMAVGLSDDAHQTIEVSIVNYLWPTLTVALAAVVNRRSGVRASSSSLECCWRRSGWWARSAVRPA
>NZ_CP015970.1|WP_126132914.1|2070365_2070590_-|hypothetical-protein
MLLATVGVVGAVGGEAGLSPTRIAANVMSNPLPYLLSLMAAAVWAAYSVFSPRLAGGRDGITVFISGVAAALWM
>NZ_CP015970.1|WP_062819557.1|2070075_2070369_-|hypothetical-protein
MNLVSPAPVGDITASGVAGLIGAAAVIASGYASWNVGILHGNITLLASASYATPVLSTAVSSLLLGAVLPLTFWGNVLLVVVGSLAGWWATRRTGRR
>NZ_CP015970.1|WP_157773938.1|2069871_2070075_+|hypothetical-protein
MTPQAQGQQEELAQRWQDVATAMWRRAVDQRRDNAGARDAALAQVAAQTAANVLAGLHAPAPEDLIY
>NZ_CP015970.1|WP_062820726.1|2068673_2069615_+|HNH-endonuclease
MTFWYIALAVLAIWITVRVVRHVRMKRYFSGEVFQAHLKELSSVVTEHNEIAAYAAEIRAGGQFGLGTSGTGSRSSLATFENTSRHDYRRDRNVAHYQALNVHNCSLQVVRNASADPLKYLIKYFGVEATEEGLAQVEKLGETISRLENAVNNLKRREADITGEFNPPKFILKHYEKQFTERVGVNLSPISVPCPEYVFEYVSAGGNSSQRTTVKLNTPTIDGLIEALSERIRRRRSAAGQRALMTARFREEIKRRDDYTCRYCSVSLDDEPHLLLEVDHIVPVSRGGLSTEDNLQTLCWRCNRSKSNKMIDA
>NZ_CP015970.1|WP_062819556.1|2066867_2068391_+|serine-hydrolase
MITAEEIDQRAIGRIVEDAVSGWSICAPTWAAAVFDRSGVIAFASAASHGFECPARGDIFRIASMSKSFLVACMLLLVERGDLDLDAPVDRYIPSFQTPSTDVVTVKMLISNASGLPEDNGWSDHNLDLPRAEFIALLRKGFHFTEPPGQAYQYSNVAFTVASMILEIVSGERYETFLNHEILEPLGLDSTRYRAGDYPQSAPLARGFSTFDRGISWVTREFAESGATAPVGALFSTVDDIAQWSAWLSAPFQADAHGGGDVARPRLSLLSGASRARMQRIHTPIPSIAGRWTSPRDDAAGYGLGLFVEHDSRFGPIAQHSGGLPGLSANMRWQLDSGIGVVAYATSEGQPVSDRAADLLDAVLRARDVPARHIRLWPQTFEAARRIDSMLRGGADHRKVSDLLAGSVFADMPAEIRRNQFEAAVARAGGLSHDVAPLADRALWCVSAAQLVWRLPCARSDLQVRIELAEVARQPVQRLVIEPLGAELAGLPADRDLVVRHHRPVLP
>NZ_CP015970.1|WP_082815953.1|2065516_2066536_+|ABC-transporter-substrate-binding-protein
MNRLRVGAAGPRSIMMSKSPTQEVDHMSRTPLMRHRRVLAAALAMVTTMAIAGCGGSSDPLADGSSSGSGSGSGGIVVGSANFPENELLADVYAGALNHQGVKASTKLNIASRETYIPALKKGEINLIPEYTGNLARYFDKSASISDSATAQASLKKALPKGLTALTPAPAENKDSMVVTKQTAEQKKLKSISDLSASASGMVLGAPPEFKTRVDGVSGLKREYGLTFKEFKPLDEAGPLTVQALKNGQVQVANLFSTDPNIAANGLVVLDDPKNLFGAQNIVPVMTSSKASPKATKALDAVSAKLTTPVVQKLVEKVVIDKQDASAVAQQWLKANDLG
>NZ_CP015970.1|WP_062819555.1|2064839_2065520_+|ABC-transporter-permease
MNLLWQWLRNPANWSGTDGVWARLAEHLAYSGIALLIAAAIGVPLGLWIGHTGRGRAVTVNLVNGMRAVPTLGLLFAAVLVIGPRLHGDAAFQVPAIVVLVILATPPILAGTYSGIDAVPPDARDAARGMGMTPGQVLGRVEVPCALPLIFSGVRSAALQVIATAILAAYVGLGGLGYFLQLGQGSRDYGMMAGGAVLVALLALGVDLLLAGVQRLTLSPGLRTRT
>NZ_CP015970.1|WP_062819554.1|2064201_2064843_+|ABC-transporter-permease
MSWFLSHTDQVWGLLVHHAALAALPLVIGVLLALPLGWLARRHRALYTPMVAGAGLLFTIPSLALFILMPLILGTGILDPTNVVVALSLYTLALMVRTVADALGSVPPDVSSAARAMGIGSLRRFLTVELPLATPAISAGMRVAAVSNVSIVSVAALIGVPQLGSLFTDGFNRTFVTEIVVGLVACIALALAFDAVIVAATRLVTPWTRRRAS
>NZ_CP015970.1|WP_062820724.1|2063041_2064205_+|ABC-transporter-ATP-binding-protein
MISFTDVVKVYADGTRAVDGLSLEAPTGRITVLVGPSGCGKTTSLRMINRMIEPSSGTIAIDGRDVASLNPDELRRGIGYVIQSGGLFPHRTVVDNIATVPRLLGRSRRQARSEAMELLERMGLDADLAGRYPAQLSGGQQQRVGVARALAADPPVMLMDEPFSAVDPQVRAQLQDEFLRLQSELGKTIVLVTHDIDEAIRLGDEVAVLRPGGTLAQLDPPSRLLADPADDFVADFLGRDRGYQRLGFSPAPPLPLTDAVTVALGADAGEARRRAASQSAAWRRPWLLVVDEQNAPLGWVHPESVSGQVERTDLHRGGTVARADGSLRAVLDAALSSPARRGVVVDEHGGLLGTVLARDVLALIENDGEDGDGAGLEEAGADGSGAP
>NZ_CP015970.1|WP_071001204.1|2071616_2072936_-|lipopolysaccharide-biosynthesis-protein
MHAFLARHEFLTSVMKVMSGTGLAQLVAALGTLYVTHNIDPTDWGLYGAVISAAQFVIPVAALRYDMAIVLPREDGEAKRIFRLATMINAIMSILSMLVMIPLGGVLSNALDHPEARWWMLGVGPIIFTYGEVYVVNYWANRRKQFGVIGTNAVWNQSVTVAGRIASCLVGFGALGQLIATFLGEVAALNNFRTRLGPDLRGIEEDRIPFRLLMRKYRKMPLLTAPNAIVDAVRQQGVNMMILFKFSPALYGKFNIAWVLMQIPSTVINQALSQVFFQKLSVTDAGHMFKAVRQSVIRSFLIGIVPFALLYFLIPPVLPWLLGDKFAQSAPIAVALVPWLFVNFITSPVSNMFIVTRNNGIALAFAIVYAVVPLGYLSVVNASIETTIYGMSLVMALLLAMYIGLALITARRFDNKYRDKSADVIAAEEAGITATQDED
>NZ_CP015970.1|WP_028700871.1|2073212_2073656_-|nucleoside-deaminase
MSRALALGDEAARRGDVPVGAVILAPDGSVLAEAANERELTGDPTAHAEVRAIRRAARALRGGSDGWRLEGCTLVVTLEPCTMCAGAVVAARIGTLVFGAFDPKAGAVASLWDVVRDPRINHRVEVHSGVMAQEASTLLREFFTARR
>NZ_CP015970.1|WP_099093028.1|2073709_2074438_-|tRNA-adenosine-deaminase-associated-protein
MCPFNDDDVDRFGEDGGTDDALDNDAEQLDDDSDYDDLDDDTEYDDLDDSDEDSDDEDSDDDEDDSDDDDEDDDDYDDLDDLEDAGADEIDLVVALYNDDGERVGVPLDGGLANDLDEFITQLRRIPGDAGAVGMISIDHQFYVIVRVRGRNVQVFLSDAVQGNDWPIARDVADFLGEDIPDPDDDSEAIGDFDLFSDAGMSDFDMEAFADLDEDSDEVLGQIARKLNFGPQFDRAASTSIR
>NZ_CP015970.1|WP_028700869.1|2074617_2075244_+|uracil-phosphoribosyltransferase
MDHPLVSHKLTLLRSTATSSPEFRRLADELVTLLAYEATRDVRVEPTTVQTPIAEAPGVTLSRPKPMVVPILRAGLGMLEGMLRLMPSAEVGFVGMARDEETLQPMTYAERLPHDLTGRQCYVLDPMLATGGSLGGAVEFLVRRGADHITCLCLLAAPEGVERFRKLVSDLGVPCHLVVAALDDHLDEHGYIVPGLGDAGDRLYGLAE
>NZ_CP015970.1|WP_082815954.1|2075240_2076086_+|hypothetical-protein
MTRRSGTLRAEDLEPLAVFLGHGPSVGAPSAVDAVPPCWHWCLLLDPVDPSRLDDDGYPIGGPITPEPGMTRMFAGGRVTCTAPLELDSPTSRRTRVARTTDKVGKHGPLRFVTLESVWAQDGRTRLVDEQDYVFTPTAHPSDTATSSSTAPSSSTARSAAASPQTGRDPSTTLAEGRILVTEPMLVAFSGLTANPYRIHWDKDFCARSGHDGLVVHGPLQALWLAEEFSRRGEPFTGRTFSYRFTATATAPTVMTLDDGEDGALLVRRPDGTITATATLG
>NZ_CP015970.1|WP_062819560.1|2076202_2076724_-|hypothetical-protein
MFDTLPHLPAVDHPELLGEPVRGYISLLPEAEVFSIDPALSDTESLCREYGEPESTCGNCVIVRGRRGEISRTVACLALATTRVDVNKLVRKRLDVRKASFAPMDEATSESGMEYGAITPVGLPQDWPIWIDPAVAEAAEVCIGAGTRSAKLVLPGKSLLALPNAEVVEGLAA
>NZ_CP015970.1|WP_082815955.1|2076826_2078131_+|MFS-transporter
MPASSDQFSSGRMPDVRPSEGRLSNRRRTSILITCCLSIFIVMVDSTGVNLALPSISREMGASTSQLQWVIDAYLLVLASLMLLSGSMADRLGRRRIFSLGLLLFGLGSALCSVATGPAMLIATRALQAIGGSMLNPVAMAIITNTYPDARRRARAIGVWGAVVDVGGQLLGILVMATLSFAIITGGEQGFDHIQVLASAAIGALALAAFILVERHTAEPLLDLRYFRSVPFSAATVVAVLLFMAFSGFMFVATLYLQDDLGKSPLHAGLLTMPIALGNALLAPVSGRIVGRRGPRPSMVAGAVALAVGGVMLTLLGPSTPLWYFVLAGFFVGGANGVTNSAITSTAVSGMPAARSGVAASIASTGRQVGQSLGVAILGASLNTGLTSHAAFTDAARPGWFMIIGLALAIGALGVISGSSRARDSEARITGTFS
>NZ_CP015970.1|WP_062819561.1|2078239_2080162_+|1,4-alpha-glucan-branching-protein
MSSSAHQNPTPETGDASATRTPTAPEDPATRARGMGAVLIDGGVGFRVWAPHATGVDVTGDFDDWNALPSGEPQDAKTDAPEPATAEHTLLGEGNGFWYGEVAGAHVGQQYRFVIHAADGRLISRIDPYARQVTSSVGNGVITDPEAFDWQGDSFTPPTLNELVIYEMHVGTFFDADPSDDRPATLDAVEQKMSHLVHLGVNAVELMPMAEFAGDYSWGYNPANIFAVESTYGGPEKLREFVRIAHSHGIAVIIDVVYNHFGPSDLDLWQFDGWSENDKGGIYFYNDWRSATPWGDTRPDYGRGEVRQFIHDNAMMWLGEFHADGLRYDMTPYMRSVDAGEMNIPDGWSLSRWINSDIRATYPERFTIAEDLHGYGAVTSTGEDGAAFHAQWDNHFVHPIRAAVIAADDASRDMGQVRDAVEFSYGDAFSRVIYTESHDEVANGSARVPEEIDAGDPDGYFAQKRSTLGAALVFTSPGVPMIFQGQEFLTDGWFRDSVPLDWHMNREFHGIVRLYADLIDLRLNVDGTTAGLTGQYAQTLHLHDDNNVYAFHRWSEGGPGDDVVVAANFNNSMYGEYTIPMPAAGGWTTRVNTDARVYSDLFTGAVVPAHVEAAAEPLDGFAARATLVLPPYAAVILSRD
>NZ_CP015970.1|WP_062819562.1|2080200_2081211_-|NADP-dependent-oxidoreductase
MTQATSTQIQLVSRPAGWPVPQNFRTVTVDLPPLAPGQVRVRNDYISVDPYMRGRMNDAESYTPPFALGETMTGGAVGHVIASQSDRFAEGDLVIHPLGWRDVAQGPAEAFSPVQEVPGAAESLYLGLLGMTGRTAYVGLTAVAGLRPGDTVFVSGAAGAVGSAAGQFARLLGASRVVGSAGSARKVELLTGRYWFDAALNYKDAPVREQLPALIPEGIDVYYDNVGGDHLEAAIDVMNRDGRAALCGSISGYNAEKPTPGPDNLHMLTTKGLMLKGFTVGFYQDRFAEFQQKVAEWFTAGRLVHDETVVEGLDHAVDGFLDMMRGGNIGKTVVKI
>NZ_CP015970.1|WP_062819563.1|2081362_2083429_+|S9-family-peptidase
MRPEQIALMPTVSTPSVHPSGRWAVVSVTHPSLEADDQVGQLWRVPLPAGRQRPARITRGFCDTAPQVSPDGRLIAFLRRLPGHRPQLALVEAHGGEPWIITSFKQGVHEFSWSPDSSRIVLTARVPDPGRYGTVKGIDAGHEDPRRLTGVMLRHNGLVPGWYTDRPSQVFLLEVPDPDAEPAVRPVGRAAGRPGVSADDCRPGTAVVRALTEDHADWSSPVFLDDDSVLACRQAATAQGPGSRELLCDPVRIDIATLATHSLRRRHDTRSVESLTVSDGRVFALVTDRGPSTCDVAINTGVAVLDPAAPADLTPLTGPDTGLTDSMAPAPGGVLVADEFRGRGRLHLVGPSPESDKSPLPEGDKSTLSESDEILLDEDVVVTGAAAIPRSHDVVVSLTTPDSPGEVAIITGGRTTVLTDFAADLHRATDVTRPEELTAATAEGLVHGWVLTPPGQGPHPVILMIHGGPHSQYTGSFFDEFQVMAGAGYAVVACNPRGSSGYGQDHARALVGRFGQVDADDVMAFLDAALDTHPDLDRTRIGIMGGSYGGYLTAWIIGHDGRWGEHHWRGAIVERGYLDPPSFVGASDIGWYYPQRYNGESRAAQESQSAMRVAEQVTTPTLVIHSEQDLRTPFSQGLEYHARLAMAGVETELLAFPGENHELTRSGTPWHRRQRFEAILEFWEDRLS

Crispr_ID: NZ_CP015970_7

• CRISPR_ID: NZ_CP015970_7
• CRISPR_location: 2096130-2096248
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015970_7

Consensus_repeat	Method
CCTCCCCGAGCGGGGCGGGGTCCACGACTCG	CRISPRCasFinder

spacers of NZ_CP015970_7

>7.1|2096161|57|NZ_CP015970|CRISPRCasFinder
GGTCGGCGTCGCCGGCCACGCGCAGCGGCGCGGGTCCGCGACCGCGCTCCGACGCTT

CRISPR arrays and Neighbor proteins around NZ_CP015970_7

CRISPR arrays

The CRISPR arrays of NZ_CP015970_7

>merge|NZ_CP015970|7|2096130-2096248|CRISPRCasFinder
CCTCCCCGAGCGGGGCGGGGTCCACGACTCGGGTCGGCGTCGCCGGCCACGCGCAGCGGCGCGGGTCCGCGACCGCGCTCCGACGCTTCCTCCCCGGGCGGGGCGGGGTCCACGACTCG

>NZ_CP015970|7|7|2096130-2096248|CRISPRCasFinder
CCTCCCCGAGCGGGGCGGGGTCCACGACTCG	GGTCGGCGTCGCCGGCCACGCGCAGCGGCGCGGGTCCGCGACCGCGCTCCGACGCTT
CCTCCCCGGGCGGGGCGGGGTCCACGACTCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062820734.1|2091983_2093690_+|sodium:solute-symporter-family-protein	unknown	unknown	gnl|CDD|271372
NZ_CP015970.1|WP_082815956.1|2101771_2102275_+|transcription-factor-WhiB	unknown	unknown	gnl|CDD|369791
NZ_CP015970.1|WP_062819570.1|2104597_2105914_+|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP015970.1|WP_062819565.1|2084189_2085065_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062820735.1|2095082_2096084_+|NAD(P)H-quinone-oxidoreductase	unknown	unknown	gnl|CDD|176180
NZ_CP015970.1|WP_062819566.1|2089375_2090428_-|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP015970.1|WP_099093029.1|2087818_2089300_+|LCP-family-protein	unknown	unknown	gnl|CDD|224235
NZ_CP015970.1|WP_015071742.1|2093706_2093970_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062819571.1|2106030_2107023_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP015970.1|WP_015071745.1|2096432_2097851_+|argininosuccinate-synthase	unknown	unknown	gnl|CDD|235434
NZ_CP015970.1|WP_062820731.1|2085178_2085874_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP015970.1|WP_062820733.1|2090424_2091651_-|galactokinase	unknown	unknown	gnl|CDD|223231
NZ_CP015970.1|WP_062820737.1|2102440_2103241_+|HAD-family-phosphatase	unknown	unknown	gnl|CDD|223635
NZ_CP015970.1|WP_028700859.1|2107015_2107855_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP015970.1|WP_099092986.1|2098177_2099428_+|MFS-transporter	unknown	unknown	gnl|CDD|340883
NZ_CP015970.1|WP_062819569.1|2103340_2104426_+|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP015970.1|WP_062819567.1|2099475_2101374_-|sodium:proton-antiporter	unknown	unknown	gnl|CDD|223104
NZ_CP015970.1|WP_015071743.1|2094140_2094644_-|hypothetical-protein	unknown	unknown	gnl|CDD|235449
NZ_CP015970.1|WP_062819572.1|2107930_2109922_+|cellulase-family-glycosylhydrolase	unknown	unknown	gnl|CDD|226444
NZ_CP015970.1|WP_062819564.1|2083421_2084159_-|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl|CDD|176506

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_062820734.1|2091983_2093690_+|sodium:solute-symporter-family-protein	gnl|CDD|271372	cd11478, SLC5sbd_u2, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_CP015970.1|WP_062819570.1|2104597_2105914_+|sugar-ABC-transporter-substrate-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.19883e-70
NZ_CP015970.1|WP_062820735.1|2095082_2096084_+|NAD(P)H-quinone-oxidoreductase	gnl|CDD|176180	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.25267e-158
NZ_CP015970.1|WP_062819566.1|2089375_2090428_-|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	4.90163e-88
NZ_CP015970.1|WP_099093029.1|2087818_2089300_+|LCP-family-protein	gnl|CDD|224235	COG1316, LytR, Transcriptional regulator [Transcription].	1.56135e-21
NZ_CP015970.1|WP_082815956.1|2101771_2102275_+|transcription-factor-WhiB	gnl|CDD|369791	pfam08281, Sigma70_r4_2, Sigma-70, region 4. Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif.	0.000120942
NZ_CP015970.1|WP_062819571.1|2106030_2107023_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.58481e-56
NZ_CP015970.1|WP_015071745.1|2096432_2097851_+|argininosuccinate-synthase	gnl|CDD|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP015970.1|WP_062820731.1|2085178_2085874_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.87859e-10
NZ_CP015970.1|WP_062820733.1|2090424_2091651_-|galactokinase	gnl|CDD|223231	COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism].	3.96339e-117
NZ_CP015970.1|WP_062820737.1|2102440_2103241_+|HAD-family-phosphatase	gnl|CDD|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	1.67954e-54
NZ_CP015970.1|WP_028700859.1|2107015_2107855_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.68825e-79
NZ_CP015970.1|WP_099092986.1|2098177_2099428_+|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.01418e-17
NZ_CP015970.1|WP_062819569.1|2103340_2104426_+|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.39105e-75
NZ_CP015970.1|WP_062819567.1|2099475_2101374_-|sodium:proton-antiporter	gnl|CDD|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	1.40026e-41
NZ_CP015970.1|WP_015071743.1|2094140_2094644_-|hypothetical-protein	gnl|CDD|235449	PRK05415, PRK05415, hypothetical protein; Provisional.	0.00172811
NZ_CP015970.1|WP_062819572.1|2107930_2109922_+|cellulase-family-glycosylhydrolase	gnl|CDD|226444	COG3934, COG3934, Endo-beta-mannanase [Carbohydrate transport and metabolism].	9.36358e-32
NZ_CP015970.1|WP_062819564.1|2083421_2084159_-|glycerophosphodiester-phosphodiesterase	gnl|CDD|176506	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.	8.929e-96

Protein sequences

>NZ_CP015970.1|WP_062820735.1|2095082_2096084_+|NAD(P)H-quinone-oxidoreductase
MHAITVLPTDATDAKGRHRPGPENMEWSQVETPTPGDGEVLVKVHAAGVNRGDLLQRQGLYPPPPGITDVMGLEISGTVADLGPGVTGWREGDEVVALLAGGGYAEYAVVPAGQLLHMPHGVDPVVASTLVEVAATVVSNMDHVGLETDQTLLVHGGAGGIGQFAIQYAKGLGCRVITTCGTAEKRQFCTDIGADVALDYHDDWVSGVKGATDGWGADVILDVMGAKYLGLNVDSLATGGRLVIIGMQGGAKGELNIGKLLNKRGTVTATSLRGRPVEEKAEICRRVEEVVWPMYADGRINPAPVEVFPISEAGAAHARLGSGEVLGKVALTL
>NZ_CP015970.1|WP_015071743.1|2094140_2094644_-|hypothetical-protein
MPDSVDVAEDPSGLPEGSTRHVLSPRPPFRGYVISGVLSLGGAALIVVASSQGWANAWIALFAVILALGIALALTATWSMLRMRLYVDLDAKGYHIHGAGQDRSGTWDKVTRAALTETRSRLTLYHGQVGRTHIVRPGVGDPAEMDQLAADVAKRLDTSRGYSQNAE
>NZ_CP015970.1|WP_015071742.1|2093706_2093970_+|hypothetical-protein
MSKNTSTKKRQTAGLGDIRVIIGGLMGIYGVILTIMGIVMTDASANLWAGIALLVVCGALLLWNALDPTLVDEGESITGGPVTDKKN
>NZ_CP015970.1|WP_062820734.1|2091983_2093690_+|sodium:solute-symporter-family-protein
MALQTLIHASPIDYVILVVYFAFVLGIGYMARHQISDSLDFFLSGRRLPAWVTGLAFVSANLGAVEIMGMSANGAQLGLPTLHYFWVGAVPAMLFLGVVMMPFYYGSGVRSVPEFMLKRFGPAAHLVNSLSFALAQLLIAGVNLYLLGSIVHALLGWPLWVALIVAAIIVLAYITFGGLSAAIYNEVLQFFVIIAGLLPMVLIGLHRVGGWDGLKAKITQAAAAHPDKIVPASEQLNSWPGQSLSGFDNPVLSVVGIVFGLGFVLGFGYWTTNFVEVQRAMASKSLSDARRTPIIGTFPKMLVPFVTVLPGVLAAVLVPEIAATKAGQAVPGGASGTVTYNDSVLYLIQDLLPNGLVGLAITGLLAAFMAGMAANISAFNTVFSVDIWQHYVKKDKPDDYYVKVGRIATVAASIIAIGTAAIASNYSNIMDYLQTLFGFFNAPLFATFILGMFWKRSTPAAGWSGLASGTLAAVAVWLPSALGVYSLSGQGVSFVAAAAGFVVDILVSVVVSLVTKPKPAAELVGLVYSETPKESLQDPEEKGKPWYKRTVPLAGLSLVLVIILNFLF
>NZ_CP015970.1|WP_062820733.1|2090424_2091651_-|galactokinase
MGVIVDTQQDIEEIVPAWSAQEGAQRANALFERTYGEAADGVWASPGRVNIIGEHTDYNGGLCLPIALPHRTYVALRRRDDAEVHLVSSFDGEELRWDGALSDVHPGGVEGWVGYTAGIAWALAEAGHQVSGFDAALVSCVPTAAGLSSSAAVECAVGLALDDVNGIGLGHSDEGRAALVDLAVRTENDLVGAPTGGLDQAASLRTAEGRALLLDCRDGSTRQVPFDLAAEDLELLVIDTRAKHSHATGGYGQRRATCEAAAKTLGVATLREITDLDDALSRLDDDESVRRVRHVVTEIARVQDFVALVDAGRLTEVGPLMNASHDSLRDDYEVSCPELDVAVDAARGAGAIGARMTGGGFGGCAISLVHAADRAAVVDAVVDAYRQAGFKAPKLHVVTPSTPGGRIS
>NZ_CP015970.1|WP_062819566.1|2089375_2090428_-|LacI-family-transcriptional-regulator
MSRGGIASRGASQTDVAKLAGVSPQTVSRVATGATNVRPATRARVRRAMEELGYVPNGAARALRYGRHGCIGLVFTDFLRTGEARTAQAVSAAAAEHGLDVLLAQIGPGGPRFSEEEMESRYRDLLERTAPLVDGFVVQGIELERPQALPDSAAPLVMASSRPGPFCTVGCAQAEGIRAAVEHLLGLGHRTVHFVAGPETSLQAQDRLAGWRATLAAHDRPVPKAVQGDWTPDSGYRAAEELLADPDVTAVLTANDEMAAGVMRAFHEHGLSVPADISVVGFDDVGAELLWPRLTTVRQDFEGIGRHLIAELAELMDHPGEMGRAAHVLVSSPLVVRESTAAPGRRGASV
>NZ_CP015970.1|WP_099093029.1|2087818_2089300_+|LCP-family-protein
MHSRVHRRRRFGLVLIGLVLVAITVLAIEAVTNPAGIASIAVRPRLLRLISLALPIGALVLVGLLVFTHIDIRPRKITRTQRWVSSLLVGTLSLLIAAPLTVGSRYANDEAAALSKIFKDRRSGTRPSIDTNKNVNDIWRDKKRVNVLLVGADDSGQRNYRKQGEMNTDTMMVASINTQTGDTSLIQIPRNTANIPFPKDSKLHQIYPDGFSNGHGDDANFFANALWTTVENEHKDAMGATDYPGADALKLGIGEALGLKLDYFMMLDIDGLQKFIEAIGGVTVNVNERLPIAGNTEGKTPTGYIEVGPNQHLSGYNAMWYARSRSASTDYDRMGRQSCLIKAVLDQVDPKTVVTRFEAIASASGDMVVSDIPEKMLPAFVELALRVRGGNINRLLFTQGRNGFQPYDPDYDLIRKQVKQTISAAGNKANKNKPVTKASSKISTTPSTTPTAKKTASSTPDSGPASASPSASSSAVSQSVTDVCAYHPVTQQR
>NZ_CP015970.1|WP_062820731.1|2085178_2085874_+|alpha/beta-hydrolase
MQVILVPGLWLDASSWQPVIGALEEAGHTARPLTMPGTGRPASESDGIGIQDWVDAVVAEIDAASPLGAVVLVGHSGGGNVVWAAADARPDAVARVVLVDTVPPAEGAIISEFPVVDGVIPFPGWDFFGEDAADLDDEVRARTLPMTRSVPMHVPADHLAFSTGRRHQVPLTALMGGLDAEGMRSELAAWPVYRTEFDSIDDVEVIRLGTGHWPQFSRPQAFARTLARVIR
>NZ_CP015970.1|WP_062819565.1|2084189_2085065_-|hypothetical-protein
MASAKKLGAAHPQILGAPVTTYRRTGGWPVVLVMEGAPLIIALVIWAASPGGSWTRILLGLWLYVITLPLHWFTMMRNRIVLHEHEISIHTAMGAPDISPYHQLYPPLVATWTNIRAIMAERDRAGGWRLEAGINQVSRYGVTFVLRSSRTVDAKTLKIVPEPIGPGFSNHLVAFDLARHPHHFIADLQRLMAAQGIPGADQLASTALPPQALTGQVADRYRQIPGDGLAGAYDRPTGPEQLPGIPPQRWALYQQIWAADPITAEQAASYKKQHEEYGQQLAQRWAQLRDQ
>NZ_CP015970.1|WP_062819564.1|2083421_2084159_-|glycerophosphodiester-phosphodiesterase
MPAIFAHRGANKSSCANKNLPENTMAAFAAAIEVGADGIELDVQLTRDGRIVVCHDETVDRVSDGHGLVIDHTFEELARLNFAATFSDQEPARIPLLDDVLALLAPTELSLNIELKNSVIRYDQLEERVVDAVNAHQMADRTVLSSFNHRSLVHLAQIAPGIRRGVLYSNDLADPWDYASRIGVQAVHPSGLLLRGRDDVGRFHAAGLSVRVWTLDEPDQIREAAALGVDAVITNDPAGARAALS
>NZ_CP015970.1|WP_015071745.1|2096432_2097851_+|argininosuccinate-synthase
MSKVITHLPVGERIGIAFSGGLDTSVAVAWMRSKGSIPCTYTADIGQYDEPDIASVPGRAHAYGAEISRLVDCKASLVDEGLSAIACGAFNVRSAGRPYFNTTPIGRAVTGTLLVRAMADDDVSIWGDGSTYKGNDIERFYRYGLLANPQLRIYKPWLDEDFVTELGGRDEMSAWLTAHDLPYRDSKEKAYSTDANIWGATHEAKTLESLNVSMESVEPIMGVKFWDPDVAVETEEVSISFEQGLPVAINGKEFDDKVALVLEANAIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLYIAYERLVNAIHNEDTIATYHNEGRRLGRLLYEGRWLDPQSLMIRESLQHWVASAVTGTVVLKLRRGWDYSIMDTAGPNFSYHAEKLSMERVEGAAFGPVDRIGQLTMRNLDIADTREKLEQYSSQGQLSNHDDLVGKLAVGGAKAISANVEEDQDAAQKALDRAAIEFGVD
>NZ_CP015970.1|WP_099092986.1|2098177_2099428_+|MFS-transporter
MRSYGELLRIREIWTTLLLAMFTRIPLFSLGTVLTLHVVTSLGMKYSSAGLVTTVFTIAGMISSPWRGSMVDRRGLRRTMMPSLIVVTAIWLVAPWLDYLPLLAVVAVGGLWNYPVYTVPRQVLIARAPLSRRRAALSLDSVSVEVCYMIGPTVAIIAATTWGTRLTIMACALVAGIGAAGLTILNPPTASEADASGTPAVDAPPRMEASTRPALASLGARGVLNMLRLPRWLTLHTAAILIAVVAAGFALGGMELTAVGQLRAMGAPQAIGWVLAASGLGSAVGGIVYGMLPRGASTPALLMGLGATTALAALAANPWQAAGLLCLAGIFCAPTLTSSIDSLSAAVPARSRGAAIGWQGSCMNAGTAMAAPLVGAAMDASGWRSGYLLAGLLGVVIAVLVLGAVRLHRTRLVHAG
>NZ_CP015970.1|WP_062819567.1|2099475_2101374_-|sodium:proton-antiporter
MNPAIYVALVIALSVGAQWLGWRLRLPALLFLLVVGFALGQFVSPDEVFGRDLLFAGVNLCVAIILFEGALSLKLRQVRDLGRPIVRLCTVTVAVSWVLISLAARLLGFDLRVALLLGAILVVTGPTVINPILRQLRPTRRVSGLLRWEGIIVDPLGAILALLVYQGVTSIEGASLWRELGRLGLTVVVALAVAIPVGLGLTAMLRRHLIPDFLQGVVFVGVALGTVVGSDLILEESGLLAVTALGVLIANRPGIELDRVLEFKENLQVLLVGALFVMLAGRVTPAEIADVAPIGLVFVAVLVLIVRPLSVQLGLAGTETSRQERILMSFMAPRGIVAASITAVLALQFSQAAQTVRSQAEAVMDGDPQRGRALMAFTERLAGMSGQVDRLVPLVFLVIVCTVAIYGLGIGRLAERLGLASASPRGVMFAGSPAWAIDAAVALRDLGVATMFVTRRSYDLDAVRAAGLRCEAADFLSEYAVDEMDLSGIASMVAVTPDDNVNSIGSVHYRRALGRSNVFGLRRTDEGEDGDSTTGTVSALKALTAFEPALEHAELERRWRAGARAHRVRIGETMSWERFRRLVPDSVAMFVVRPSSTMVATPSMAAPRNGDVVVYLGEALPDVVEEGPLTRR
>NZ_CP015970.1|WP_082815956.1|2101771_2102275_+|transcription-factor-WhiB
MEEDATPTNAEQRRLRAALTTRATDTCMACPFFEDCLDMAVTKHDVSGFVAATTSRQRAQMRNLLRVEVTADDMDALIGVIASGRQIATRDVVALRRAHPDESLDFIAQRLGCSLSTVKRHLRRARAAAASEADASRRHSPEGPSRGRLITAFESVTGMRRGTEAAA
>NZ_CP015970.1|WP_062820737.1|2102440_2103241_+|HAD-family-phosphatase
MRSFTPRLVALDIDGTLVDLEGRMPDSVEEAVARVRESGTPVVLATGRGLFGTLPIHEALNLPPGEMVVSNGAVTVRTPPLEIVDEVTFDPGPVIREVLEARPTALVAVEDVGVGYRLNKYFPDGELQGEMIIESVEELSSRPAARVIIRDPDAPPSEFVELARHLGLHGVSYFIGWSAWMDITPRGVTKASALAQLCRARGIDRADVLAMGDGHNDVEMLAWAGRGVAMGDAPEAVQSVADAVTGTFAEEGTAAELNRWFGPAAR
>NZ_CP015970.1|WP_062819569.1|2103340_2104426_+|LacI-family-transcriptional-regulator
MTHVTISDIAATLGISTAAVSYALNGRPGVSAATRQRVLDLVEEMAWKPDSTARSLRSRRSMAVGIALSRDPEEIAYEPFYSYIQAGIEQALAARGYSLMISRPGRRPGAELDVYRTWAAQRRVDGVILFDLLADDPRRGVLPELRLPFVEVTSEDAGPAPRVLVDDAADAANLVRHLADQGYRSLVHLSGPVELTHERLRADAIARTAAAFGLDVIHGVCRYTMEDGIRGFLEAFEEVGKGPTAAAGAPGRPLGVIASSDLLALGALRGAQRLELGVPDQVGVVSWDDSLPCRISNPPLTSLERRPIEMGRLAADLLLDRLDGRHRDLVRLPPSELTVRASSRRDASSGSHDAEGLLTSV
>NZ_CP015970.1|WP_062819570.1|2104597_2105914_+|sugar-ABC-transporter-substrate-binding-protein
MATTRRQFLALGSMAAMALAATACGGDSSNGESSSDDKGTTLTYWASNQGTSLANDKEVLTPVLADFTKKTGIKVKLEVIGWNDLQTRIQTAITSGQGPDVLNIGNTWGVSLQATGGLMEFDDAEMKAVGGADRFVKAALETGGAPGTKPTSLPLYGLAYGLYYNKAMFKTAGLTPPTTWEEMVAAGKKLTDPSKGVYGLSLAAASYTENAHFAFINAAQNGAALFDSAGKPTFTSTGVVEGVQRYIDLMQTDKIVNTSDSQYDNGTLSVTAFAKKKAAMIINQNNADATIISAGMKADEFGVVPFPAPKDAKKNVASHIAGINIAVMKSTKHKDQALKFVNYMTSEAVQETLGKPYSALPVLKDGKATFTSDAEELKVFTEVYNTRSEPLPLVANEDQYESSVGKAMNNLFAKAATGTTVKSADITSVLKTAQESIR
>NZ_CP015970.1|WP_062819571.1|2106030_2107023_+|sugar-ABC-transporter-permease
MAITTTTAPTGSTPGGPSGGGRSAPRRASRQPYWWFPYLIVAPAVIFEIAIHIIPMLTGVWMSFVKLTKFFIRNWANAPFIGLGNYQYAIDINTSVGQSLVRSFLMTCAYTIIVVGASWILGMAAAVALQKTFRSRAFWRTLFLIPYALPMYAGIITWNFMFQRDTGMVNHLLVDQLHLMSSRPFLLIGGNAFGSLVTVAIWRMWPFAFLMIMAGLQSVPTDIYEASAIDGATPWRQWRTITLPMLGSVNKVLVLVMFLWVFNDFNTPYVLFGNGQPPAGDLISFHIYNASFLSWDFGTGAAMSVMLLIFLLIVSLIYLFFINRSGDDNA
>NZ_CP015970.1|WP_028700859.1|2107015_2107855_+|carbohydrate-ABC-transporter-permease
MRDTRGEKIFRWVTIVVLSVFILIPLYVMATSAIKPLGDVQGDFTWWPSHITFSAFRSMWQTIPLAHYFVNSLIVCSIATLCSVIIAIFASFAMSRWRFRGRNIFSTTVLSTQMFPGVLFLLPLYIIFVNIDTSTGVTLIGTKLGLIITYLTFSLPFSIWMLAGYFDGIPRELDEASMVDGCTPWGALWRVVLPAAKPGVVAVAIYSFMTAWGEVLFASVMTTDANRTLAVGLRLYSTQTNVYWNEIMAASLVVSVPVVLVFLLLQRSFVAGLTAGAVK
>NZ_CP015970.1|WP_062819572.1|2107930_2109922_+|cellulase-family-glycosylhydrolase
MERHDHRLPDVWLGANFWSRTGGPLMWRHYSPTVVREELSVLADHGLTMTRSFFYWPDFQPAPECLDEEKVSHFADFLAAHAELGMTTVPTFIVGHMSGENWDPSWRADRPIYSDVWMVSQQAWFIEHLTARFADHPAIAGWLISNEIPIYGGQAPEPVVTAWARLMVQAVRAGGGRQPVSIGDGAWGLEVSGHDSGFSVRRLAELTDFVGPHVYAMETDVIRSHLKAAFICELAAVGDRPVVLEEFGLSSDFASGAKAERFYRQFLFTTLTAGATGWIAWNNTDYDDLAAQRPYSHHPFEMHFGITDSRGRPKPPLKALEEFSGVLAAIELTRCRRADVDAALVVPSYLSAGYPFHDEAQRRLAAAHGEQAYIAAREAGLPVGVIREKEDGGLPEGYRLYLVPSVKELAGPSWLQLAELARGGATVYVSYCAGESPDQRGPWWSATEELFGVRNDLAYGLNDPVDDVVTIRFTADFGDIRAGQTLEFTAAGNENSRAYLPVEVIDGRVVAVDRNGRPMIVVKEHDSGRAVLSTIPVEHFAARRRGANPEDTWRLYQALASLASIPRPLGVDDPRVLVDSLERDDGVVFHILVSEHPDRARIRLDGRPGLIKPDGLIKPDGLTDLDGEPVGDSVLLDPYGVAVLRSGAGDAESTGGMSGTGAS

Crispr_ID: NZ_CP015970_8

• CRISPR_ID: NZ_CP015970_8
• CRISPR_location: 2976199-2976329
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015970_8

Consensus_repeat	Method
CGGTCGGGTCCGTGGGAGGTGGGTCGGCACCCGTGGCCACGCGT	CRISPRCasFinder

spacers of NZ_CP015970_8

>8.1|2976243|43|NZ_CP015970|CRISPRCasFinder
CGCGGGTGAAGTCCGTGGCCGTGCTTGGGGGCTGCCTCCCCGA

CRISPR arrays and Neighbor proteins around NZ_CP015970_8

CRISPR arrays

The CRISPR arrays of NZ_CP015970_8

>merge|NZ_CP015970|8|2976199-2976329|CRISPRCasFinder
CGGTCGGGTCCGTGGGAGGTGGGTCGGCACCCGTGGCCACGCGTCGCGGGTGAAGTCCGTGGCCGTGCTTGGGGGCTGCCTCCCCGACGGTCGGGTCCGTGGGAGGCGGGTCGGCACCCGTGGCCACGCGT

>NZ_CP015970|8|8|2976199-2976329|CRISPRCasFinder
CGGTCGGGTCCGTGGGAGGTGGGTCGGCACCCGTGGCCACGCGT	CGCGGGTGAAGTCCGTGGCCGTGCTTGGGGGCTGCCTCCCCGA
CGGTCGGGTCCGTGGGAGGCGGGTCGGCACCCGTGGCCACGCGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_028700510.1|2977016_2977634_-|DNA-3-methyladenine-glycosylase	unknown	unknown	gnl|CDD|234840
NZ_CP015970.1|WP_082816018.1|2963110_2965348_-|hypothetical-protein	unknown	unknown	gnl|CDD|380193
NZ_CP015970.1|WP_062820003.1|2971715_2972330_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239646
NZ_CP015970.1|WP_099093040.1|2970235_2971585_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224172
NZ_CP015970.1|WP_071001137.1|2968888_2969134_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062820010.1|2982674_2984504_-|Na+/H+-antiporter-NhaA	unknown	unknown	gnl|CDD|377746
NZ_CP015970.1|WP_062820005.1|2976448_2976985_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_071001136.1|2967204_2968338_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062820007.1|2979736_2980246_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP015970.1|WP_157756364.1|2965399_2966824_-|hypothetical-protein	unknown	unknown	gnl|CDD|369025
NZ_CP015970.1|WP_062820004.1|2974976_2976152_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340825
NZ_CP015970.1|WP_126133021.1|2968439_2968904_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_028700505.1|2981866_2982184_+|thioredoxin	unknown	unknown	gnl|CDD|200072
NZ_CP015970.1|WP_062820009.1|2980814_2981825_+|thioredoxin-disulfide-reductase	unknown	unknown	gnl|CDD|273540
NZ_CP015970.1|WP_062820002.1|2969264_2970095_+|sulfurtransferase	unknown	unknown	gnl|CDD|225450
NZ_CP015970.1|WP_062820006.1|2978631_2979633_-|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|176214
NZ_CP015970.1|WP_082816019.1|2972326_2974873_+|ATP-dependent-helicase-HrpB	unknown	unknown	gnl|CDD|273901
NZ_CP015970.1|WP_076692607.1|2977682_2978312_+|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl|CDD|274058
NZ_CP015970.1|WP_028700509.1|2978287_2978608_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062820008.1|2980260_2980776_+|glutathione-peroxidase	unknown	unknown	gnl|CDD|223463

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_028700510.1|2977016_2977634_-|DNA-3-methyladenine-glycosylase	gnl|CDD|234840	PRK00802, PRK00802, DNA-3-methyladenine glycosylase.	2.12282e-84
NZ_CP015970.1|WP_082816018.1|2963110_2965348_-|hypothetical-protein	gnl|CDD|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	1.30093e-37
NZ_CP015970.1|WP_062820003.1|2971715_2972330_+|NUDIX-domain-containing-protein	gnl|CDD|239646	cd03674, Nudix_Hydrolase_1, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, U=I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.0553e-27
NZ_CP015970.1|WP_099093040.1|2970235_2971585_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	8.59381e-117
NZ_CP015970.1|WP_062820010.1|2982674_2984504_-|Na+/H+-antiporter-NhaA	gnl|CDD|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	2.8773e-151
NZ_CP015970.1|WP_062820009.1|2980814_2981825_+|thioredoxin-disulfide-reductase	gnl|CDD|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	1.53549e-146
NZ_CP015970.1|WP_062820007.1|2979736_2980246_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	7.10587e-21
NZ_CP015970.1|WP_062820006.1|2978631_2979633_-|zinc-binding-alcohol-dehydrogenase-family-protein	gnl|CDD|176214	cd08252, AL_MDR, Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	9.30037e-157
NZ_CP015970.1|WP_062820004.1|2974976_2976152_+|glycosyltransferase-family-4-protein	gnl|CDD|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	4.54633e-77
NZ_CP015970.1|WP_028700505.1|2981866_2982184_+|thioredoxin	gnl|CDD|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	4.86712e-44
NZ_CP015970.1|WP_062820002.1|2969264_2970095_+|sulfurtransferase	gnl|CDD|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	5.98435e-73
NZ_CP015970.1|WP_157756364.1|2965399_2966824_-|hypothetical-protein	gnl|CDD|369025	pfam06662, C5-epim_C, D-glucuronyl C5-epimerase C-terminus. This family represents the C-terminus of D-glucuronyl C5-epimerase (EC:5.1.3.-). Glucuronyl C5-epimerases catalyze the conversion of D-glucuronic acid (GlcUA) to L-iduronic acid (IdceA) units during the biosynthesis of glycosaminoglycans.	1.19827e-06
NZ_CP015970.1|WP_082816019.1|2972326_2974873_+|ATP-dependent-helicase-HrpB	gnl|CDD|273901	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB. This model represents HrpB, one of two related but uncharacterized DEAH-box ATP-dependent helicases in many Proteobacteria, but also in a few species of other lineages. The member from Rhizobium meliloti has been designated HelO. HrpB is typically about 800 residues in length, while its paralog HrpA (TIGR01967), also uncharacterized, is about 1300 amino acids long. Related characterized eukarotic proteins are RNA helicases associated with pre-mRNA processing. [Unknown function, Enzymes of unknown specificity].	4.11896e-177
NZ_CP015970.1|WP_076692607.1|2977682_2978312_+|RNA-2',3'-cyclic-phosphodiesterase	gnl|CDD|274058	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase. This protein family consists of bacterial and archaeal proteins with two tandem copies of Pfam domain pfam02834. Members for which activity has been measured perform a reversible, ATP-independent 2'-5'-ligation of what is presumably a non-phyiological substrate: half-tRNA splice intermediates from an intron-containing yeast tRNA. The physiological substrate(s) in prokaryotes may include small 2'-5'-link-containing oligonucleotides, perhaps with regulatory or biosynthetic roles. [Transcription, RNA processing].	4.54527e-24
NZ_CP015970.1|WP_062820008.1|2980260_2980776_+|glutathione-peroxidase	gnl|CDD|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	1.93534e-67

Protein sequences

>NZ_CP015970.1|WP_062820004.1|2974976_2976152_+|glycosyltransferase-family-4-protein
MPNRRVTVINHYAFPPGSGGITRNFDMFSRLKNWTPHFFAANINHTSGQKMTVDDPRYTLVPIPEYQGNGVKRMLGWVAFAAGAGARALVRPADVIFASSPQILAPAAAMVVAKLRRKPFVVEIRDLWPDSLVSGGAVKEGSLLHKVLVGLERTIYANARRIVVVPTGWEDHFRELGIDVDKITVVPNGADLAEYDVPESKEELRSRYGISGFTAVFSGTHANYVGLDLIVDAAEKLPDVNFLLVGSGARKQWAVDEVASRGLANVTFHDQVPKSELVRILKACDVGLHTVTPQEVFNKGMSPNKLYDYMAAGLAVVSNAKVPLRDVIVDDEVGAVVEPYDLVEGISGVRDADEATMERWHAKARELMADRFSLQASVDKLETVLDKSLYR
>NZ_CP015970.1|WP_082816019.1|2972326_2974873_+|ATP-dependent-helicase-HrpB
MIDLERIGEGLPVADHADRLRDALAGRRLVVQAPPGTGKTTFVPPLVSTTVPGRVVVTQPRRIAARAAATRLASLTGTRAGALAAHTVRGESTLTPSTRVEFVTTGVLVQRLLRDPELIGADAVILDEVHERHLDADLALAMVCELAELRDDLTVAAMSATLDAPMWAGLLGDGSTGEGGPAPVVEIPSVLHPLEVRWAPTPGSATDARGVRRAFIDHVVAQTALAFAAEEPAEREEGNGALVFMPGAREVDAVVAGLRGRDDLAGVDVMALYGRMDARAQDAALKPSDRPRIVVATSVAESSLTVPGVRLVIDSGLSREPRLDRGRQMTGLVTVRESQASATQRAGRAARLGPGVAVRCLRHEDWAGMAPEAPPEAEHADLVGPLLTLACWGTPRGEGMALPGALPPDRVAEAEEELRGLGAVDAEGRATPRGRDLAQIPADPRLARALTDARGIGSRAVAEVVAMLASDERAADGDLVALLRALRSGRHPGSRSWKQQARRLESLVPRAAAAETTADVQVGTVVALAHPGWIARRRDNGGYLLVSGTGADLPRGSSLTGQEWLAVAETSRVAGRGSGALIRAAVPIDEGLALEAAAGYEVTEDRARWRAGRVSGRRVHRLGAVTLTSTPVKATRAAARRAVADALAEEGLGIDGHGIFTWSRGAIELRRRLGLLHRVIGDPWPAMAEESLAARAEEWLGPELDALARGRGAGGASMASALRRLLPWPAAAHLDELVPESVVVPTGSHIRLEYPEVGSDLAPVLAVKLQECFGWTTGPTVCDGRVRVVLHLLSPARRPLAVTDDLASFWVNAYPQVRAENRGRYIKHPWPEDPLTAPPQRGTKKSGR
>NZ_CP015970.1|WP_062820003.1|2971715_2972330_+|NUDIX-domain-containing-protein
MAHLNTEPHGHDVTISAWIFRQVDGVWKALVHKHRKMGIWLQPGGHIEHTENPWQALVHEMREETGYEPEQYDVLQPLPRMRDGVHDVMHPVPAVMNTHSPYQGHFHSDLIMVLTTDEDPAHEPRPGESREMAWLTPREYAAHQDAEPDAVAIMTMLAEKVVGRWYRTPATDWSLADAEPDPLTDRTPEQATAPDPDDDRETSW
>NZ_CP015970.1|WP_099093040.1|2970235_2971585_-|NAD(P)/FAD-dependent-oxidoreductase
MPALFSRFGHEPAFKRDRPKVAVVGGGFGGMAAAKALAAEGCHVTIIDKNPYTTFQPLLYQVATGGLNPGDVTYRLRSFTAKLGAHARFRRASVTAIDTDARLVHVDNGEPIPYDYVVLAQGVGANFFGIPGAAERSDTIYTRASSLRARDVIFSHLEALDTDKTRSFDVIIVGGGPTGVETAGTLAEMKSVGIPAIFPDVSIDRVHVTLVEMGPHLLAPFDAGLRHYTRKQLQKRGVDVRTETAIKEIREDSVLLGDGQTLPADMVIWAAGVGAHKKAVGWGFETGRGGRIVTDKNLRVHGQDRIFAVGDGAIIDENPLPQLAQPAIQEGELVASQVVHLERGEALQEFSYVDKGTMATIGRNAAVVELANGPKFTGFPAWLVWVMIHIYSLLGGRNRIQAMVNLGSRYLTFNREAGAIVGDVLTEDGEPESQKPESERPAASSKADD
>NZ_CP015970.1|WP_062820002.1|2969264_2970095_+|sulfurtransferase
MTPLLPTPLVPVDDLSDALAGPDGRRIVILDVSMGASAADPHIPGALRFDLDGPMSDQSTGLPHTMPAPDVLQESLRGLGISADSHVVVTETDFLFAAARPWWMLRAMGVDAVSILDGGNPAWERAGHPLVTEETSEPAPGDLVVEPRPGLLVDEEHVKRSLAAGETVVDARSRARFAGIEPEPRPGLRAGHMPGAVNLPYTELQREGRLLPVVDLASAVDRTAGRGPIVASCGSGVTACVVALAAVMSGRDDVAVYDGSWSEWGRQGGPAVVTGC
>NZ_CP015970.1|WP_071001137.1|2968888_2969134_-|hypothetical-protein
MSRNTFVAVAAAVLAGGIVIALSRRSGRSSSEVGDKDLRHLQKRKPTGGRRTRRADPYADGHATPAGGDTRPKGAPAYFKA
>NZ_CP015970.1|WP_126133021.1|2968439_2968904_+|hypothetical-protein
MDSTPLVSRRLSLVAALLPWLTVVVPTRTTRKDLAVEEFLLDEGSIGLLAMTLLFGVTAVLALVPAARRWWGWCAAGVSLASAVVLAVYTVPGQVNWDGVDSQGRPTGGVELILPDFGWGILVLAWAAMTAAAVIALVTRRRAASARASGQALK
>NZ_CP015970.1|WP_071001136.1|2967204_2968338_+|hypothetical-protein
MRSSGTPREALVTAGAGVGLWLVQRVAVVVVWLIQGGSLPGDLMKWDAQWYARIAAGGYHWPVPQPGHTDPWLSDLAFFPGFPALTRAVALTGLDVTWATLLTAWIGSACAAGVIALVGREVGGARTGVLLVLLWGAAPRSLVQILGYSEGWFIALVGLGLLMGLRRQWIRAGLAICVAGVFRPAVVPMGVLLGLAWVAAWPVFRRGVDSSERRRRFLGAALTPWGFLAHAGVVAMRTGRWDGYLLVQTAWGSSLGWSNELFHQVREYWPIAPYNWTYFGLVAASVILYAVLLVAMIATRESPLLWGQVALVLLLTVFSVGYFQSKARFLLPAFPAFLPVARLLEKVPRWLCVATMVVITGLSTWWSVYVLGGPYSP
>NZ_CP015970.1|WP_157756364.1|2965399_2966824_-|hypothetical-protein
MTRRAMLAGTAALVGATTLMSTSPSRAQADNTFFKTFGGSVVPLPAGPRQTLSDGYIGALRIGPDGVPLTQLNGGWVIHPTILGNYLNSLLNSYETVSGGQPKNLARVVTTMEALLARAARRNGAVFLKYEFPWHAFNGDLPDPWYSSFGQSKFPQVAWRLWKITGERRWLQACRELVQAFYEGPVPGKTGLPWIAKVDPNHNLWLDEYPTPSGRESAVFNGHYYALHELSVYSQLSGDAQAQKLVSGAVQTLADYRNLCRHAGTFSHYFASTSANVPSYHYINTSCYLNVYNNTGWAPFATTVDQMISDWRFTEGKSAQLYLSGGYNHTIRKVTGSAGANAGSATTWKPGSNMVVASGARTQYVAFNGVWSRMDSGPRKGYWLLESIYGYPEGFDTDRCEYRFPRVLYFEKGKVTTFIADSRGHMTNPRVTTFNARSSAHTSLRAKVNGRQYAKLTDGSFAGRWAPLGGTVHF
>NZ_CP015970.1|WP_082816018.1|2963110_2965348_-|hypothetical-protein
MRMSHAVTSATLCLGLIAAGTFYGPASPARAEGPSQPVITSVDTHVTSTAGGALVRLHGSGLTSDAMVKISGRSAEVRSASGGTMTVIAPAAPSGVAHIQVTTPGGASVTNATAAIMYVGQIPGTRPKARTTTDRTRLRPRSVTTGISDPNLALCINDQLGLAPSTPPTPEQLSSLTALYCTDRTINSLAGISLLGNLKTLDVGSNTITDVGPLGSMTGLKELGLQDNKIADLAPLSALTSLTRLDAWTNPISSLAPLKSLTNLEYLDVSDTGVSSLDPLTGLTRLISLDANFTTVSNLTPLRSVAGLLELQLWQARVSDLSPLAGLSALTYLDVSANRVTGISTLSRLTRLETLNLEDNAVADATPLAGLTRLYSLNLSGNRISSVAPLTKLSALQWLFVQRNRIADLSPLSGLRPNSIEAQDQTVAAPVTTGKYTTFRMADRTGTSVTVSGGFATYSGGRIAFAHAGTTMMSFRNSDSTFTGTVLASCTYNVPMAMGDGTGDRIADIFGVGPDGTLHFFRGSAGTGLASMPNPWQDAADATALIQIPDVSGDKRSDLLAREPDGQLLMRTGLGNGYLGTAKKFGTGWTSMDLIISAGHLSATSSNFLLARRHSDGSLVRYTLTSSGLSGTTIVGWRWGSMRAIIGAPDWNGDGRDDVLAIRDDGTLWLYTSTASGALSPGRKVGQGWTSFTAALSPGDMSGDGRADLVGVRNDGSVFAYTTGRSGFSAGRLIGHGFQGYKVIG
>NZ_CP015970.1|WP_062820005.1|2976448_2976985_+|hypothetical-protein
MAHNAYKALSRVFSVVLPAAGAGLIAGGRFAHQYVADQLAGQRITMPGGKDLPTEEMKSALARYSGLPMTTGPQAEAYANHYIGAHLAAAAKGRTYEEISQEYMAASADPDRKDTQEAADLGQLKEMLFTGSSLRGMLLNAYGWWTVGSIASWAGVGATGLGAILAVPGWARRRGHRA
>NZ_CP015970.1|WP_028700510.1|2977016_2977634_-|DNA-3-methyladenine-glycosylase
MIDLSQPALDVAPLLLGAVISHTVVLDDGSRAEVRIRLTEVEAYMGPDDPASHAFRGPTPRTAVMFGPPSHLYVYLSYGIHRCVNVVCSPDGRASAVLLRAGEVVSGEDLARRRRSGAARQVPDRRLACGPGNLGQALGAGLSDSGAVLWQSEGLCPPPEAATWRLEPPGSPTPCSRSRRVGISHNAEKLWRFTIPDDPTVSRPR
>NZ_CP015970.1|WP_076692607.1|2977682_2978312_+|RNA-2',3'-cyclic-phosphodiesterase
MGHRMYAALVPPAEVLEAVDATLERMAERTSPGDPRRLRWSRPGDAHITLVFMADVDDPDTLIDALAASLADQPPVAVGLAGAGAFPQPGRARILWLGVNDPADTLPALARRARSAARGAGGRPKSGRFSPHVTAARAHDADVTGEIEALSSFSTPMWVARSVTVFESHLPNPSRGGRRGGGGGVRHEPVAQIGLEGIPRRSQFRSPNQ
>NZ_CP015970.1|WP_028700509.1|2978287_2978608_-|hypothetical-protein
MKNCLKDPESLSTAPVVAAGLIGGWQVARATGVRPIGGVVLAAAGVLAGRSWWARKGAATAVGLSAAYLGAFGASHPLAKRIGAWPSVLTVTAAAAGAAYWFGDRN
>NZ_CP015970.1|WP_062820006.1|2978631_2979633_-|zinc-binding-alcohol-dehydrogenase-family-protein
MHMPAVAARALPITNPDSLVDVTVPVPTPGPNDLLVEVRAVSVNPIDIKLRNGAGTPEQPLILGFDAVGTVVAVGEAVEGFSVGDEVWHSGDRTRPGTYARFTLIDHRVAAMRPGTLAAAQAAALPLTAITASEALREHMRLGGNDSFLMIGGAGGVGSIAIQLATLLTDGPVVATASHDESADWCLKLGADAVIDHRRPLPDQAAEIGVDGFDGVLSPHTVGKVAELAEVMAPFGHLVTIDGLPDFDILAFKPKSLTVTSESMFTRTQFHTPDIAEQGRILARVAELVDSGKVKTTMTTRLQGINAATLRKATEMVEQGHMIGKVVVEADAW
>NZ_CP015970.1|WP_062820007.1|2979736_2980246_+|MarR-family-transcriptional-regulator
MDEESTRIGTVTDLVEQAEPLEQMVCFAMYSATQATVQYYRDVLAPFGITYQQFLVLVELNLAGRQSPTHLADALHLDCSSVSGLLNRMERSGLVERIRDDKDRRAVSVAATDRSREIFSRLGFLGGCVSGAMGLEPDEMRALLKALHKVRDAMVSAPRPQPEPVLVIA
>NZ_CP015970.1|WP_062820008.1|2980260_2980776_+|glutathione-peroxidase
MTTTQARQTVDLKDLPVTTLQGEHTTFGDIVGDRTALVVNVASRCGLSPQYEQLEALQKKYADRGFTVIGFPCRQFLGQELKSERAIEEYCSTTWGVTFPMSARIKVNGSQTDPIYVQLKDFPRQEDGKDGRITWNFEKFVVSRDGHVTRFSPTTKPDEPQVINAIEKTLS
>NZ_CP015970.1|WP_062820009.1|2980814_2981825_+|thioredoxin-disulfide-reductase
MRDVIIIGSGPAGLTAAIYAARANLNPLLIASSVDVGGELMQTTEVENFPGFPDGIQGPDLMAAMQAQAEKFGTEVVYDDVAALDITGPVKKVTVGEGDTFEARTLIYATGSAYRKLGIDRETELSGRGISWCATCDGAFFRDRHVAVIGGGDSAMEEATFLSRFASKVTVIHRRDALRASAAMIERAKADPKIEFHWNSTVADFLGDQKVDGMRLRDTVTGDTEEMPIDGVFEAIGADPRTHLVHGVLDLTDAGTIAVDGRSSRTSVPGVFAAGDVIDPTYKQAATAAGSGVVAALDAQAYLAALDDAKNAQIDDAGNTEAAQSVVAEDTVPAAV
>NZ_CP015970.1|WP_028700505.1|2981866_2982184_+|thioredoxin
MSINVTDASFETDVLKSDKTVVVDFWATWCGPCRQVSPILDRIADEHSDKITLAKIDVDANPGIAQQYGITSIPAIFVFKDGELAKTTVGAKPKPVLERELAEFL
>NZ_CP015970.1|WP_062820010.1|2982674_2984504_-|Na+/H+-antiporter-NhaA
MDRNPENQNLQPLRRSMRIHRWLTNDIYAAVALALATVAALVWANIGSSYETFWHSHFGFILGSLDFELTLHEWVDEGIMAIFFFMVGLDVRRDLTLGELRSKRRAVLPVAAALGGLIVPAALFLIIEGGSEGAAAWGAVISTDTAFAVGMLAVVAPRNAPRLRVFLLALAVIDDIAALTVIAIFYTTDLNLIALGLAALGLIGVWLLERANVWRVGPYLVLALYTWGCFFASGVHATLAGVLIALLMPVYPPRRDDLQTASHVFDLFHQAPQPDMAKRAREALTFSVPMNQRLSSAIAPYVNYLVVPLFALANAGVALSGDALATAFTSTLTWGIIAGLVIGKVVGITGGSMLVLKLSPGSRLPGLDAPRIAGVGALSGMGFTISLLVAGMALDDPAATDQARVGIIVASVLALGLSWVIFRLSKRFNPLPPPSDAHLGRDVDPEADHIRGPVNAPATLVVYASMNYTYRRQTAIAISQTRAALGDQVRVVLRHSPVDDAAVTGALALEAAGAQGKFWEMHDEMLGIRGPLDSDLVREAAERIGLDVGRFERRIEKQTDRERVDDDGLDLAGFETSEKPVIYLNGERVANAANSLTLTLGARKALAGV

Crispr_ID: NZ_CP015970_9

• CRISPR_ID: NZ_CP015970_9
• CRISPR_location: 3058249-3058379
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015970_9

Consensus_repeat	Method
TATCCACGCGGCGACGCTGTGGTGGCAGAACTCATTCCCG	CRISPRCasFinder

spacers of NZ_CP015970_9

>9.1|3058289|51|NZ_CP015970|CRISPRCasFinder
GGGGTCGGGACTCCTGAACGAGTCCTGCCATGTCCGGGCCGCGGGGTGGAC

CRISPR arrays and Neighbor proteins around NZ_CP015970_9

CRISPR arrays

The CRISPR arrays of NZ_CP015970_9

>merge|NZ_CP015970|9|3058249-3058379|CRISPRCasFinder
TATCCACGCGGCGACGCTGTGGTGGCAGAACTCATTCCCGGGGGTCGGGACTCCTGAACGAGTCCTGCCATGTCCGGGCCGCGGGGTGGACTATCCACGCGGTGACGCTGTGGTGGCAGAACTCATTCCCG

>NZ_CP015970|9|9|3058249-3058379|CRISPRCasFinder
TATCCACGCGGCGACGCTGTGGTGGCAGAACTCATTCCCG	GGGGTCGGGACTCCTGAACGAGTCCTGCCATGTCCGGGCCGCGGGGTGGAC
TATCCACGCGGTGACGCTGTGGTGGCAGAACTCATTCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062820050.1|3051548_3052478_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP015970.1|WP_062820053.1|3055741_3057478_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP015970.1|WP_126133050.1|3068435_3069704_-|allantoate-amidohydrolase	unknown	unknown	gnl|CDD|236456
NZ_CP015970.1|WP_062820051.1|3052606_3053647_+|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|380488
NZ_CP015970.1|WP_062820045.1|3044511_3046002_+|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl|CDD|129794
NZ_CP015970.1|WP_126133017.1|3057468_3058146_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_CP015970.1|WP_062820052.1|3053678_3055745_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NZ_CP015970.1|WP_062820049.1|3050667_3051552_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP015970.1|WP_062820057.1|3060197_3060779_+|hypothetical-protein	unknown	unknown	gnl|CDD|372273
NZ_CP015970.1|WP_062820047.1|3047301_3049089_-|beta-galactosidase	unknown	unknown	gnl|CDD|366567
NZ_CP015970.1|WP_062820062.1|3065780_3066566_+|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224715
NZ_CP015970.1|WP_062820048.1|3049196_3050555_-|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP015970.1|WP_051143615.1|3067443_3068298_-|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224651
NZ_CP015970.1|WP_062820046.1|3046155_3047298_+|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341462
NZ_CP015970.1|WP_015069310.1|3066565_3067318_+|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl|CDD|376667
NZ_CP015970.1|WP_062820059.1|3061826_3062693_-|DUF2877-domain-containing-protein	unknown	unknown	gnl|CDD|378658
NZ_CP015970.1|WP_062820063.1|3069760_3070984_-|alanine--glyoxylate-aminotransferase-family-protein	unknown	unknown	gnl|CDD|223153
NZ_CP015970.1|WP_062820056.1|3059157_3060063_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062820055.1|3058429_3059083_+|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319829
NZ_CP015970.1|WP_062820058.1|3060852_3061830_-|hypothetical-protein	unknown	unknown	gnl|CDD|183466

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_062820050.1|3051548_3052478_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	4.34144e-69
NZ_CP015970.1|WP_062820053.1|3055741_3057478_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	8.83052e-156
NZ_CP015970.1|WP_126133050.1|3068435_3069704_-|allantoate-amidohydrolase	gnl|CDD|236456	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed.	1.07406e-156
NZ_CP015970.1|WP_062820051.1|3052606_3053647_+|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|380488	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of LacI is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	4.26213e-107
NZ_CP015970.1|WP_062820045.1|3044511_3046002_+|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.89118e-57
NZ_CP015970.1|WP_126133017.1|3057468_3058146_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.20077e-13
NZ_CP015970.1|WP_062820052.1|3053678_3055745_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP015970.1|WP_062820049.1|3050667_3051552_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.54337e-70
NZ_CP015970.1|WP_062820057.1|3060197_3060779_+|hypothetical-protein	gnl|CDD|372273	pfam12724, Flavodoxin_5, Flavodoxin domain. This is a family of flavodoxins. Flavodoxins are electron transfer proteins that carry a molecule of non-covalently bound FMN.	5.03199e-07
NZ_CP015970.1|WP_062820047.1|3047301_3049089_-|beta-galactosidase	gnl|CDD|366567	pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35.	4.87855e-131
NZ_CP015970.1|WP_062820062.1|3065780_3066566_+|GntR-family-transcriptional-regulator	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.19486e-41
NZ_CP015970.1|WP_062820048.1|3049196_3050555_-|sugar-ABC-transporter-substrate-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.01215e-61
NZ_CP015970.1|WP_051143615.1|3067443_3068298_-|MurR/RpiR-family-transcriptional-regulator	gnl|CDD|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.84789e-26
NZ_CP015970.1|WP_062820046.1|3046155_3047298_+|iron-containing-alcohol-dehydrogenase	gnl|CDD|341462	cd08183, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like. This family contains iron-containing alcohol dehydrogenase (Fe-ADH) which catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. It is distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized.	0
NZ_CP015970.1|WP_015069310.1|3066565_3067318_+|sulfite-exporter-TauE/SafE-family-protein	gnl|CDD|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	3.60994e-25
NZ_CP015970.1|WP_062820059.1|3061826_3062693_-|DUF2877-domain-containing-protein	gnl|CDD|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	5.63579e-28
NZ_CP015970.1|WP_062820063.1|3069760_3070984_-|alanine--glyoxylate-aminotransferase-family-protein	gnl|CDD|223153	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism].	2.02402e-121
NZ_CP015970.1|WP_062820055.1|3058429_3059083_+|HAD-IA-family-hydrolase	gnl|CDD|319829	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). This subfamily includes Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). GPP1p and GPP2p are involved in glycerol biosynthesis, GPP1 is induced in response to both anaerobic and hyperosmotic stress, GPP2 is induced in response to hyperosmotic or oxidative stress, and during diauxic shift; overexpression of DOG1 or DOG2 confers 2-deoxyglucose resistance. These belong to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.3597e-50
NZ_CP015970.1|WP_062820058.1|3060852_3061830_-|hypothetical-protein	gnl|CDD|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	1.41025e-146

Protein sequences

>NZ_CP015970.1|WP_126133017.1|3057468_3058146_-|TetR/AcrR-family-transcriptional-regulator
MTRARPMPPEQRRASIIDATHTLLVERGITFTTREVAEAAGIAEGTVFRHFSSKDDLIRAVIDDAFDPAPLCREIDATDPSLDLARAVHHALSLMQRRFHSITGVMTALHPAHRPPPPPGPGHPGPGDPHHGVRAWHAAVIESLTGILNRYSDRLRVPVGQACTLLVASVLVDTGLAPVAVHRFSATELTDILLNGIAVAPTGTDPHPMAHSTSLHVRPQESPCS
>NZ_CP015970.1|WP_062820053.1|3055741_3057478_-|ABC-transporter-ATP-binding-protein
MLVKLVGRYIRPYRWQVLVILLLQIGAQVASLTLPTINADIINKGVVALDTGFVKSHSALMLAVAAGQAVCQVAAIYLAGMTAMGLGRDIRDTVFNRTIEFSSREVNRFGAPSLITRTTNDVQQVQMLVFFVLGIIIGAPITMIVGVVMALRADVGLSWIIVVAVVLLGGVIGVLMTRLGPLFRRQQSRIDDLNRVTREQITGVRVVRAFVREPYEAERFDTTNGNLRDIQVSVGRFMAAMFPLVMFIMNISQIGVFWFASSRIDSGELEVGALTSFTTYLIQILMSVMMAVMMIIFWPRATVCATRILEVLDTETSVTPPSHPVTETTETGTVAFHDVEFSYPGADEPVLSGIDFSMAKGTTTAIIGSTGAGKTTLVNLIPRLFDVTGGTVLVDGVDVRALDPHLLERAVGLVPQKPYLFTGTVASNLRDGDPGATDEDLWKALRIAQADDFVSEMPEGLDAPIVQGGTNVSGGQRQRLSIARALVKKADVYLFDDSFSALDVTTDARLRAALDESITDAAILMVAQRVSTIRNADQILVLDDGRLVGKGTHEELMETCPTYLEIVNSQLSAEEAAA
>NZ_CP015970.1|WP_062820052.1|3053678_3055745_-|ABC-transporter-ATP-binding-protein
MSSTSRTAAGHQGPQKTGALSKDEQQHIARQASRQRGGGHGPGGGGRIAEKAVNFGPSLKRLLKELALNKVVIGIIVVVAAISVALNVIGPKILGRATDVIFGGVIGKQLGNRIPQARGMTADQFIAMVEKSGQSGQLGKFVDVLRQYDDIVIGHGVDFHKLGLVVLAALGVYVISALLMFLQGFLLNTAVQQAIYRLRRKFSAKLDKLPLSYFDKQPRGELMSRMSNDIDNVAQTLQQTLQQLLNAVLMVIGVLIMMFWVSPLLAVISIVVIPVSGVVAALIGKRSQVQFAHVWKSTGELNAVVEEAYTGHALVKAFGRQEAVGSTFHDRNDELYQASFKAQFISGIIQPVMFLIGNINYVIVVLVGCLRVTSGQMPLGDVQAFIQYSRMFTQPITQIASMANLLQSGVASAERVFEVFDAEEMSAEAEGKLVATRGRVAFEDVSFSYSPDVPLITDLSMVAEPGQTVAIVGPTGAGKTTLVNLLMRFYEIDGGRITLDGTDIRTVPRADLRSRIGMVLQDTWLFGGTIRDNIAYGRPDASEEDIVRAAKAAYVDRFVHSLPDGYDTVIDEEGSNVSVGEKQLITIARAFLAAPELLILDEATSSVDTRTEVLVQKAMNRLRSGRTSFVIAHRLSTIRDADLILVMQHGAIVEQGSHSDLMAAEGAYYDLYESQFNAAADEEEQPVR
>NZ_CP015970.1|WP_062820051.1|3052606_3053647_+|LacI-family-DNA-binding-transcriptional-regulator
MDARTHRSGGRRVSQADVARRAGVSGQTVSRVANAMDNVEPATRDKVLAAMRELGYRPNKAARALRSGQFGTIGVTAFNLKTHGNVRTLSAIVNAAGEQGFSVTLVPVARPTRPDILHAFDELLDQAVDGVIPLIEIPMTDSTELTIPPGLPVVVVSSGAATGDFPYVDNDQKGGSRALIEHLLALGHREFRFIGGPVDSYPGRQREQVWAEALASAGLTMPPVIRGDWTPEDGYVAGRELARDPDITAVVVANDQMALGVLRALHEAGRRVPEDISVVGFDDIPESASFWPPLTTVHQDFEEVGRRAVARLLDEINGRSPEGPAGPVIIPTSVVVRESSGPVRSS
>NZ_CP015970.1|WP_062820050.1|3051548_3052478_-|sugar-ABC-transporter-permease
MTVAAAPPDGGGSDAEQALRKDRKRWTGWLFIIPFLLVFAAFLVAPLVYSIYLSLFQDKLIGGTSFVGFDNYKAVFTDPKFWSALKRVAIFLVVQVPIMTVLALVAALGIDSGRLKGSGLYRILLFLPYAVPGVVATLIWGFMYGDKFGLTASINNLLGTHLAPLVSSWILVSIGNIVTWEFMGYNMLIFYSSLKVIPTELYEAAEVDGAGAMSIVRYIKIPALRGSIVISIIFSIIGSFQLFNEPNLLQPLAPNAITTNFTPNLYAYNLSFAGQQINYAATVAIVMGVVTAVIAYVVQLRGSRKETMR
>NZ_CP015970.1|WP_062820049.1|3050667_3051552_-|carbohydrate-ABC-transporter-permease
MSASNPSRHLARDPRQRRSVVLTVAMVIFTIYSLIPLLWLIINATKTQGSLFSSFGLWFSGDFSLWSNIVGTFTYDNGIFLHWLFNTLLYVVVGAGGATILATLGGYGLAKYNFPGRRGVFAVVLGAVAVPGAAVAVPTFLMFSKLGLTNTPWAVILPSLISPFGLYLVWTFATDAVPTEILEAARIDGAGEFRTFFTISLKLLGPGIVTVALFAIVATWNNYFLPLIMINDPKWYPLTVGLSQWTAQATGAAAQPIYNLVIAGALITILPIVVIFLLLQRYWQSGLSAGSVKG
>NZ_CP015970.1|WP_062820048.1|3049196_3050555_-|sugar-ABC-transporter-substrate-binding-protein
MSRYVTTRRGFLAGLGAVAVGTGLAACGGSGSGSGSSSAKATGNADDVDAALKKGGTITYWSWTPSGKDQVAAFMKKYPNVTVKLVNPGTAATTYTKLQNAITAKSGVPDVCQIEYYALAQFALPGALYDLNQVGFDKFKADYSTGPWGSVNQNNKLIGLPQDSGPMAMFYNKEVFDKHKLTVPKTWDEYVDVAKKLHAADPKAYITSDSGDAGFTTSMIWQAGGKPFNADGTNVTINLADEGTKKWTAVWNKLVEGKLLSQIAGWSDEWFQGLGNGTLATLLTGAWMPGNFTASVAAGKGKWRVAPMPTYDGTAVNAENGGSAQCVMTQSKNPALAAAFLRWLNHEQDSIDIFTKSGGFPSTTKDLSSSSFLDDAPEYFGGQKINEVLAAGAKNVVSGWQYLPYQVYGNSVFADTVGQSYAKFTSLDTGLANWQKSLVEYGNKQGFTVKTA
>NZ_CP015970.1|WP_062820047.1|3047301_3049089_-|beta-galactosidase
MTTFSVGEHDFLLDGSPHQILSGALHYFRIQPEQWADRIHKARLLGLNTIETYVAWNAHEPVEGQWSWADGLDLAAFLKAVADEGMHAIVRPAPYICAEWDNGGLPAWLFGDGAAGVRRDEPVFMAAVERYLRRVYEVIEPLQIDHGGPVILVQIENEYGAYGSDPEYLRKLVGITRAAGITVPLTTVDQPEDDMLSAGSLPELLHTGSFGSRSPERLATLRRHQPTGPLMCMEYWNGWFDDWGTPHHTTNAAASAADLDLLLGSGASVNLYMLCGGTNFGLTNGANDKGTYEPIVTSYDYDAPLDEAGHPTAKYWAFREVIGRYTELSAEVPAGFSPAPVLGSPFTGEVDLLDAVEASGSRVGVGHLPTMDEMGQFHGLAVFRTHIDLDEDAELSFADVRDRALVLVDGEVAGALDRARKVFSAAIPAGSHEVTLLVEDQGRVDYGPRLGEPKGLIGPAVVRFDSGETTEISDWSYLPVPADPLPLLESTSAPDHSASDHPARDGRPVLRRGSLDVAGPADLFLDTAGWGAGVVWFNGLCLGRFWDVGPQRTLYVPSPLVRTGANDVVVLDLHPRAGARIATLAEPILDSPIAG
>NZ_CP015970.1|WP_062820046.1|3046155_3047298_+|iron-containing-alcohol-dehydrogenase
MEFNFATAGRIVFGAGRFKELPGLVAGFGPRVMLVTGGHAARLPGLDALGEERVGVLSKGEPTIPQVEDAVAAARDFGPDVIVAVGGGSAIDTAKSVGILARNEGSVLDHIEVVGRGVPLESRSIPVVACPTTAGAGAEVTANSPIISPEHGIKASLRSPAMIPDIALIDPELTIDTPPSVTAASGFDALTQCLEPYVSVKANVLTDQLAAEGMRRAASGLRRAWLDGTDVEARTDMSLCSLFGGISLANAKLGAAHGLAAPLGGMTGGAHGDICAAVLAAATRVNVESMIRRDFDNPALRKYDRAARILTGHHDAKASDGVEWIADIVSDLQVPGLEALGLQRSQIDEAADAAMRASSMKGNPIVLTHEEIVEIIERSM
>NZ_CP015970.1|WP_062820045.1|3044511_3046002_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MSVDTRNQHTDPAAPGSSSAGGPSVTPSDTISGKLVGSIVATAILSFLGLLLETVVNILFPALMADFGITMSAVSWMTTGYLLVVSVIMPLSGYLQRRFTARSLFVTAAIAVMAGALVAAMAPVYPVLLAGRLLQGIGTGIATPLMFSIIMMQAPRAKVGMLMGVGGLILGIAPALGPTLGGAIGTLAGWRLIFWLNIPLLVIALVVGARSIQQATPTRKEHLAVGQLVLLALGLVGLVLGIERIGAMVSSGTPGAAAMAVAIATPIVGLVCLALFVRAAGRSDHPLIHLNVLRDGTYAWSLVAFAFLQFITLGLGYVLPTYAQMSMGHSSLVAGLAVLPAAVIGAVFAPLGGVILDHVGARVPIMTGAVVALVSAVLLAVLGVRVNLVLLAVMYLVFMLGFGLAFANTQTHGMAHVAQHLTPDATAMMNTCQQFAGALSMTVLSTIVAVRQSGLTSGTAAFQHGTRSGSAGGLAVLAAVAVVGLVAEHMGLKKRD
>NZ_CP015970.1|WP_062820055.1|3058429_3059083_+|HAD-IA-family-hydrolase
MGEDLGPLAGCDFEAVLFDSDGTLIDSTAVVERCWARWTAEFGVDPDDARHGVPVIEIVNELIEPAQRSRALARIRELELGDVDGVVPMPGALDALRALDAATSAIATSCDRDLMEVRIAASRISAPPVVITRTDVEHGKPSPDPWLLAASRLGADPSRCLVVEDSQAGLDAARAAGCATLALRTTTSGDLDADAVVDDLSRVRFTKESDGVRVALR
>NZ_CP015970.1|WP_062820056.1|3059157_3060063_-|hypothetical-protein
MPPHDPQHNASASPPHKPMRTGTGRRTRLSDAQTERRMLDAGIRFVTANGLSLSLEHLSMEDLIRDAGVSRTSSYRRWPTKDQFAASLLMEIARATELTSDTEALLEALADADIAAIDVSTPAGRRTALVEALRALMHTDLVTMLDSPRWRSYMVLRAGHIGLADTELRTRVAEALTATEQRFTATRARAFAALCRIIGYHLDEPETMTWEQLSLTVGAMATGMLIRGYSDPAPIRTVTPRRALGSQVASPWSSAALGAVGTFMDAVEPDPEVTWDAEHLAQLRAQLADLPAIALQILTEE
>NZ_CP015970.1|WP_062820057.1|3060197_3060779_+|hypothetical-protein
MPPRQKGLADETGTIPAGLRMDENRRRSPMNVLMIVESCFGNTARVAGAIAAALREGGAQVSLVQADAAPAPAGEGLVLIGAPTHNMNLPTPASRSQARDKGGREPVTGVIEWIDALPTSLDAGRVAVFSTVTGGFMSGSASKQMVKKLRRHGVRDAERQDFQVLRTPGPLADGELERAGRWAGELVAAAVGR
>NZ_CP015970.1|WP_062820058.1|3060852_3061830_-|hypothetical-protein
MRVVIGVGGNAIAPRGQANTVADQRAQIRRVCGTLLDVAAAHELVITHGNGPQVGMLALQKDPDGRAPLPLDVLGAETQGMIGYLIETELRNEMTRRSRALTKQQRARAHRDGEVIRSGGAQRLVTTVLTLAEVSLDDPAFDHPTKFVGPVYTPEQARALADEHGWVFADDGGHPRRVVPSPRPRRIIQVDSTKQLLAAGHIVICTGGGGIPIARDPKGYYVGVEAVLDKDASSALFAAELKADVLVLATDADAVMADWGTPSARPIRQASVAELEAMDLAEGSMGPKVKAGCDFVAKHGGRAVIGRLSDLEKLVAGTAGTSIVA
>NZ_CP015970.1|WP_062820059.1|3061826_3062693_-|DUF2877-domain-containing-protein
MTATPKAQDLRIRALQVSEPVARLARRPVPRAGEVTGDLAGIYTHSVAIRIHDVAGPVLVSLAESPVDAVCQARVSSASMRRMRSADLGSPVVLRVGGHDVVATRMVPSGMPRPFEAPPSWFDSVEGDTYGRPRLERAARALATDRDADALGELCGLGIGLTPSGDDALVGLIAASTCAGLGARARRRLAGRLRAGRETGRTTETALSSLRLALAGDFSPPVLDLLRALTGAGSSAENPPEADAVDRLAHHGHSSGADLMAGINALAAMTRTTAMSCTPEVSEEGEAS
>NZ_CP015970.1|WP_062820062.1|3065780_3066566_+|GntR-family-transcriptional-regulator
MDSLRDRVVAQLREMILSNELPPGTKLRERTLSERLGVSRVPVREALMALESDLLAAPARREDGSQGSGLEVTRFDRRDVAELFDAREALEPLVARLAAEHRRDDQLAELREYLDRARRAAAAGDNRAGAMANAGFHDLLVEASGSGLLVGLMAPLQTRIERLFRRTIVGRAPELADDHARMVDALADRDAATAGLLAHLHVTSTREPSLELFDDWYTNLASSGGGDEQPTLLDEESDQPDENRLSENTPTENTPIEKESH
>NZ_CP015970.1|WP_015069310.1|3066565_3067318_+|sulfite-exporter-TauE/SafE-family-protein
MDALQIVAMILAGAGAGLINTVVGSGSLVTYPVMVMFGLPPVSANIANTVGLVPGSIAGSWGYRRELAALRPLLLRLGVVAVVGALIGAFLLTRLPSSVFSAVVPFLILFAALLVAFQPRIAAAMKPVDGTRWHPLLIVVLLASIYGGYFSAAQGIILLGVLGLYLEAGLQEQNGLKNLLQTLVNIVAAIFFIVSGHIDWAYAGCIAVGSVVGALAGAWVARRLPAKFFRIFIVVFGVAMAVYMGWRTFS
>NZ_CP015970.1|WP_051143615.1|3067443_3068298_-|MurR/RpiR-family-transcriptional-regulator
MTGELGVDRAGDEESPASPVEERIRDAFTGLSGQEQRAATTILEHLDDLATYSSADLSRLSGVSRPTLSRLYRRLGYQGFAELRAEARAARGVPIGPSRGIEAHLAQESRNIAHLGRLADGRLQAAVTSMMGATDLVIIGERNSYPVALHLREQLIQLRPRTRLLPLPGQTLAEELVGVGPGDTVVLVGLRRRAGGFDALLKFCCELHADVVLIADNSALRHAETVNHFLPCSLSSSGPFSSYASAMSLVAMIANEASAMTGPQGSRRVGLITDGYDALGEIED
>NZ_CP015970.1|WP_126133050.1|3068435_3069704_-|allantoate-amidohydrolase
MTPARRIMARADELARHSAMDGGIERVYLSPEHAEVDALAADWMREAGLATRQDASGARVGRLEGSRPGLPALILGSHLDTVPDAGRYDGPLGVLLAIEVARRIRESGRTLPFALETYAFAEEEGVRFGATLLCSRALAGTWTEDLWDLRDADGVSLRQAFTSFGLDPARVGEAARFTADPGDSEAGEKGVVGYLEAHIEQGPLLEAADRPLGVVTTIAGARRMDITVTGEARHAGGTPYPRRRDALVGAAEAVVAIERIGRDRDVIATVGRLHVEPGGVNVVPGQVVFSLDLRAETDEKRDAAWEEIRATMTEICTRRGLELGVDQFHEARSVTCAPWLADAVAAGIRTATGSDEEPMRIWSRAGHDAMAVADMCDIAMMFIRCHDGISHAPDESVLEADVAVALDAYEAAVWKLADQYGA
>NZ_CP015970.1|WP_062820063.1|3069760_3070984_-|alanine--glyoxylate-aminotransferase-family-protein
MTLDQLNPPTRLLMGPGPINADPRVARATASALTGQFDPWMTATMNETMGLYRSVFSTANEQTFLVDGTSRAAIEAALVSLVSPGQTVLVAVMGRFGLLLKEIAERAGAQVVTIERPWGTVFTLDEIEEGLRTHRPDVFATVQGDTATTMNQPLEGLGQLCHRYGALCYVDATASVAGNTLLVDEWGLDVVSAGLQKCLGGPSGSAPITISERAREVISSRRHVEAGITEGAEGPGERIRSNYLDLAMLMDYWGPRRLNHHTESGPMLYAARECARIIADEGIANTVERHRLHGAAMAAGLAGLGLELFGDQAHRMNNVIGVKIPDDVGGDALRAALLEDFAIEIGTSFGPLAGVVWRVGVMGYNARRDAVLTTLAALEAELRRFGHPTPAGGGLTAAMSYYQEQES

Crispr_ID: NZ_CP015970_10

• CRISPR_ID: NZ_CP015970_10
• CRISPR_location: 3141825-3141929
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015970_10

Consensus_repeat	Method
GTTCGGGGAGGAAGCGAGCGCCTGCGCGAGCGTGGAGGGG	CRISPRCasFinder

spacers of NZ_CP015970_10

>10.1|3141865|25|NZ_CP015970|CRISPRCasFinder
CTGGGCTCGGTCACAGACCCGACTC

CRISPR arrays and Neighbor proteins around NZ_CP015970_10

CRISPR arrays

The CRISPR arrays of NZ_CP015970_10

>merge|NZ_CP015970|10|3141825-3141929|CRISPRCasFinder
GTTCGGGGAGGAAGCGAGCGCCTGCGCGAGCGTGGAGGGGCTGGGCTCGGTCACAGACCCGACTCGTTCGGGGAGGAAGCGAGCGCCTGCGCGAGCGTGGAGGGG

>NZ_CP015970|10|10|3141825-3141929|CRISPRCasFinder
GTTCGGGGAGGAAGCGAGCGCCTGCGCGAGCGTGGAGGGG	CTGGGCTCGGTCACAGACCCGACTC
GTTCGGGGAGGAAGCGAGCGCCTGCGCGAGCGTGGAGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_015069367.1|3152233_3153037_+|HAD-family-phosphatase	unknown	unknown	gnl|CDD|369792
NZ_CP015970.1|WP_015069355.1|3137194_3137557_-|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl|CDD|224109
NZ_CP015970.1|WP_081583319.1|3131481_3132252_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|375436
NZ_CP015970.1|WP_062820103.1|3153036_3153855_+|HAD-family-phosphatase	unknown	unknown	gnl|CDD|223635
NZ_CP015970.1|WP_062820098.1|3142694_3143009_+|thiamine-binding-protein	unknown	unknown	gnl|CDD|376658
NZ_CP015970.1|WP_015069358.1|3141439_3141769_+|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl|CDD|376829
NZ_CP015970.1|WP_126133010.1|3150418_3152077_-|threonine/serine-exporter-family-protein	unknown	unknown	gnl|CDD|377697
NZ_CP015970.1|WP_015069356.1|3137831_3138188_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP015970.1|WP_062820100.1|3144413_3146246_-|beta-galactosidase	unknown	unknown	gnl|CDD|366567
NZ_CP015970.1|WP_062820102.1|3147802_3150544_+|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|376899
NZ_CP015970.1|WP_062820827.1|3138418_3141340_+|DNA-polymerase-III-subunit-gamma-and-tau	unknown	unknown	gnl|CDD|236090
NZ_CP015970.1|WP_015069359.1|3142012_3142633_+|recombination-protein-RecR	unknown	unknown	gnl|CDD|234616
NZ_CP015970.1|WP_062820101.1|3146400_3147027_+|PadR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224609
NZ_CP015970.1|WP_015069364.1|3147023_3147803_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP015970.1|WP_126133011.1|3136237_3136966_-|hypothetical-protein	unknown	unknown	gnl|CDD|225140
NZ_CP015970.1|WP_062820096.1|3133227_3134844_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|226089
NZ_CP015970.1|WP_062820095.1|3132244_3133231_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP015970.1|WP_062820825.1|3129947_3131321_-|APC-family-permease	unknown	unknown	gnl|CDD|223605
NZ_CP015970.1|WP_062820099.1|3143045_3144269_-|MFS-transporter	unknown	unknown	gnl|CDD|340951
NZ_CP015970.1|WP_082816033.1|3134874_3136248_-|APC-family-permease	unknown	unknown	gnl|CDD|223605

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_015069367.1|3152233_3153037_+|HAD-family-phosphatase	gnl|CDD|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	7.7484e-43
NZ_CP015970.1|WP_015069355.1|3137194_3137557_-|RNA-binding-S4-domain-containing-protein	gnl|CDD|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	3.37372e-22
NZ_CP015970.1|WP_081583319.1|3131481_3132252_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|375436	pfam17933, TetR_C_25, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in Rv1219c of Mycobacterium tuberculosis. Structural studies indicate that the helix alpha 10 of the C-terminal end of Rv1219c forms a long arm feature, a feature which is unique in Rv1219c compared to some other members of the TetR family. Furthermore, it has been shown that substrate binding occurs in the C-terminal regulatory domain of Rv1219c.	2.95487e-27
NZ_CP015970.1|WP_062820103.1|3153036_3153855_+|HAD-family-phosphatase	gnl|CDD|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	2.87386e-52
NZ_CP015970.1|WP_062820098.1|3142694_3143009_+|thiamine-binding-protein	gnl|CDD|376658	pfam01910, Thiamine_BP, Thiamine-binding protein. The crystal structure of two of these members shows that this domain has a ferredoxin like fold and is likely to exists as at least homodimers. Sulphate ions are are located at the dimer interfaces, which are thought to confer additional stability. Although the function of this domain remains to be identified, its structure suggests a role in protein-protein interactions possibly regulated by the binding of small-molecule ligands. Solution of the structure of the hyperthermophilic anaerobic Thermotoga maritima sequence, UniProtKB:Q9WYV6, shows that this has a beta-alpha-beta-beta-alpha-beta ferredoxin-like fold and assembles as a homotetramer. It was possible to identify a pocket in each monmer that bound an unidentified ligand. It was also found that it bound charged thiamine though not hydroxymethyl pyrimidine. It is proposed that it is transporting charged thiamine around the cytoplasm. Under oxidative conditions this bacterium is under stress, and the transcriiptional unit within which this protein is expressed is up-regulated in these conditions, suggesting that the chelation of cytoplasmic thaimine is part of the response mechanism to such oxidatvie stress, which is mediated by this family.	2.52777e-31
NZ_CP015970.1|WP_015069358.1|3141439_3141769_+|YbaB/EbfC-family-nucleoid-associated-protein	gnl|CDD|376829	pfam02575, YbaB_DNA_bd, YbaB/EbfC DNA-binding family. This is a family of DNA-binding proteins. Members of this family form homodimers which bind DNA via a tweezer-like structure. The conformation of the DNA is changed when bound to these proteins. In bacteria, these proteins may play a role in DNA replication-recovery following DNA damage.	1.47163e-30
NZ_CP015970.1|WP_126133010.1|3150418_3152077_-|threonine/serine-exporter-family-protein	gnl|CDD|377697	pfam06738, ThrE, Putative threonine/serine exporter. ThrE is a family of bacterial and Archaeal proteins that catalyze the export of L-threonine from the cell. UniProtKB:Q79VD1 has been characterized as being necessary for this export. The domain exhibits 10 putative TMs and catalyzes the proton-motive-force-dependent efflux of threonine and serine.	2.10089e-42
NZ_CP015970.1|WP_062820100.1|3144413_3146246_-|beta-galactosidase	gnl|CDD|366567	pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35.	5.54872e-127
NZ_CP015970.1|WP_062820102.1|3147802_3150544_+|FtsX-like-permease-family-protein	gnl|CDD|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	3.74845e-08
NZ_CP015970.1|WP_062820827.1|3138418_3141340_+|DNA-polymerase-III-subunit-gamma-and-tau	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP015970.1|WP_015069359.1|3142012_3142633_+|recombination-protein-RecR	gnl|CDD|234616	PRK00076, recR, recombination protein RecR; Reviewed.	2.79453e-119
NZ_CP015970.1|WP_062820101.1|3146400_3147027_+|PadR-family-transcriptional-regulator	gnl|CDD|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.12056e-16
NZ_CP015970.1|WP_015069364.1|3147023_3147803_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.08732e-104
NZ_CP015970.1|WP_082816033.1|3134874_3136248_-|APC-family-permease	gnl|CDD|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	4.84111e-40
NZ_CP015970.1|WP_062820096.1|3133227_3134844_+|ABC-transporter-permease	gnl|CDD|226089	COG3559, TnrB3, Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane].	6.7404e-92
NZ_CP015970.1|WP_062820095.1|3132244_3133231_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.97728e-78
NZ_CP015970.1|WP_062820825.1|3129947_3131321_-|APC-family-permease	gnl|CDD|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	4.71267e-37
NZ_CP015970.1|WP_062820099.1|3143045_3144269_-|MFS-transporter	gnl|CDD|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.26098e-58
NZ_CP015970.1|WP_126133011.1|3136237_3136966_-|hypothetical-protein	gnl|CDD|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	9.85095e-53

Protein sequences

>NZ_CP015970.1|WP_015069358.1|3141439_3141769_+|YbaB/EbfC-family-nucleoid-associated-protein
MTTPEGGFDMSGFDMNGLLAQAQAMQAQLAQAQQELAAATFEGSAGGGLVTATVSGSGELQALVIKPEAVDPEDTETLSDLIVAAVRDASAKAAAKQASLVPKIPGLGM
>NZ_CP015970.1|WP_062820827.1|3138418_3141340_+|DNA-polymerase-III-subunit-gamma-and-tau
MADEPSDDDRLDEYVQDGPDLFGGEPEPAEPGAGAEPTPADDVEEEPDDEPVDAFSGPETPLEPEGLDSEEDVDPDDLIVPEVEEPEPEPEDEPDAGPVDVPSDDVPEPPLALYRRYRPETFDEVIGQEHVTEPLKRAILNNRVNHAYLFSGPRGCGKTTSARILARALNCEKGPTPTPCGVCQSCRDLGRGGPGSIDVIEIDAASHGGVDDARDLRERAFFAPVASRYKIYIIDEAHMVTTQGFNAMLKLVEEPPPHVKFIFATTEPEKVIGTIRSRTHHYPFRLVPPKTLVTYLEQICQQEGIAVDHAVLPLVVRAGGGSVRDSLSVLDQLLGGAQADGVSYEQAAALLGYTPDALLDQIVDAFAAGDAHEVFATIDKVIEVGQDPRRFAEDLLRRMRDLVILAAVPDACTSGLIDVSPEQAGRLSHQVAGLGSGELTRAAEVLATGLTQMRGTTAPRLHLELMCSRILLPGADAGDRGYSARLERLERRMGMGDGVAGEMPAAPAPVTPVQSTGSAAPVASAETSQPSRTAGGETPQSRWQESPRQASPQPPQEPDTSGAGAPPPRSSGPSVTSPQQPSQPRRRPRPSSRDYAPGGQGPEARRDQPQARPQENRPEQPRQDRSRQESPSAPRPDAGPRPREQASGPAPSGQGQVDIAMVRRAWPQVLDVVRGRRKVAWMVLSQYAQVVEVHGRSATIAFANPGARQMFESGPDQATLHDAVVEVLGVDLTFTPVLGGGQGPAGPAPSGPSQPEPYSAGPGGGSGPGYGSEPGGPQEAPPDPSEPGPDQTDRDRAVDGPVGVVVDPAGGVPVPARDAADRESVAARPDSPVPAPDSTPISDGVRASAPSPAGVPMPSSGPSPSSGPSPASGPSPASASTPPEQAVGDPAGGKDAGPIDDAAHHVMTHRWSARAKENIRAMSHRVDEAPPEEPPEEADWTDSEIVEAPQQSPAQLIMAELGGVVIDDPLAEQ
>NZ_CP015970.1|WP_015069356.1|3137831_3138188_+|hypothetical-protein
MTERRIITTNRAGVIWSGITWVCVLLFLPAGLASMAMQTLLPANLGYPQLDAPSGVPVWLNRTVLVLDILVFVIPPLVVTLANKKAKRLGHRVKGVVAGSWAVAGLVAAIALMLWFFG
>NZ_CP015970.1|WP_015069355.1|3137194_3137557_-|RNA-binding-S4-domain-containing-protein
MTRIDVWLWSVRAFKTRSLATNAVKGGHIRLNDDPVKPAKEVKPGDLVTIKTPGWDRVLKVVQPIGRRVGAKIAVEAYEDISAPRPEWLSAPMARRDRGAGRPTKKDRREIERLRGRENR
>NZ_CP015970.1|WP_126133011.1|3136237_3136966_-|hypothetical-protein
MPTTLDLRDLPAALRAHLGPRTAWWTVRSPFEILVGCVLVQNTNWRNVEGSLAGLRDASVDSPADLLNTTTPELTALIRSSGFQTSKERALRGLCGWWATRLGGTGPAIEAPVEASALLATSALLPETPTPQLRAELLGLRGIGPETADVIMLYLLGRGVFVSDTYARRLLTRLGLAVPRSYNALARLVTRRVDLDLAGWQEFHGLIDDYGKQYCTGDAAWERGPLAGHRLAPKDGGAVHAR
>NZ_CP015970.1|WP_082816033.1|3134874_3136248_-|APC-family-permease
MPVDRLTAPPRRDHRPDRRGDGGLRRSLTLPTLIVYGLLFIGPTSPMGTFGVLDARSHGAIGLVFIIATLAVAFTAWSYARMSRAVPLAGSVFAYASAGLGRRPGFIAGWMLGLDYLFMPSMMSLILGIAAHHLVPSVPAWVFTAAGIVLMTGLNLAGIRTTTTVSFIILGVEIVMLAVFVVAAVVVLATHGPQRGWLSPLTGVGPFDPAGVIGAVSIAVLSFLGFDGIASFAEETTGSSRQVSRALVVCLVLAGALFVVQTYLAALLSPRTPGYLAAHQGEQGTDFYQLLDSQIGTWLGTTVTVVKAIGPVFSAMVAQAAASRLMYGMARDGALPRPLARIDRRTRTPRNAVLVTAVLTLSISVSAAIRPDGLDLLSSLVTVGALVGFLFLHAAVIGYFVCGRRTSHRTAHIVIPVIGGLIIATVLALAAHPALVVAGIWLAIGLAALAVRERTAG
>NZ_CP015970.1|WP_062820096.1|3133227_3134844_+|ABC-transporter-permease
MTPLTGTLRLLGWGLRRDRLRIGMWCLGVGLTAGATVPAVRDAYPDAAARIARAEISRMPGTVVMTGPFFGAGPSGSAHDPGVGAVVVSEIGMFLLVAVAIMSILAAVRHTRGDEEAGRTELVRALPTGRAAPASAAMLLVVLMNALVAAVVAGCLVATGLDLAGSLAFGASCLVTGLAFGALALCAAQLAEHSRSAGGLAMAVLGALFLARAVGDVDDPDGGSWLSWLSPIAWAQQIRAFADLRWWPLGLGLGLAVIALVVAWLLAGRRDLGEGLLSVRRGRASAPADLVSPAGMALRLLRPSIIAWTIALLVLGVVFGSLAGAIEDLVAETPEIATWLGGSGALLDSFGGLIAAYLAAGVTALAVHLVLRLREEESAGRIEHQIAMGAGRIGVMGGWLAVSAVGVTLALLASAVGLGIGTVSALDDRAWLWRLIGATMGYLPAVLAVMGLAVALVGWAPRAAKAVWILVGWIAVVVFFEDLLGIPDAVADISPVALTPTAPAEDASVMVLICLTAAAAVLSGIGLWGMRRRDLTGA
>NZ_CP015970.1|WP_062820095.1|3132244_3133231_+|ABC-transporter-ATP-binding-protein
MNDAPIDCRGLEKSFGRTRALNGFDLRVEPGEIAGFLGPNGAGKSTTIRILLGVLRADGGTARVLGADPWADAVALHRRMAYVPGDVSLWPGISGGEIIDYLVGLRSTAYRRSDQYRRRRRDLLERFQLDPTKKAGTYSKGNRQKVALVAALSCDADLYLFDEPTSGLDPLMEALFTAELARLRDEGRTVLLSSHILGEVENACDTVTIIRDGRAAESGRLDELRHLRRAGVEAVLSGEAADRLGALDGVHDVSRDGERMAFTVDDAAMTQVLGTLADVDAREVSIQPVRLERLFLDHYESSSDRDITGEEDERRHAEGKTDARGTRR
>NZ_CP015970.1|WP_081583319.1|3131481_3132252_+|TetR/AcrR-family-transcriptional-regulator
MDSTNESGDRAPSGPGRKAGGTRGGARAQVAEETRARILDAAFGVFAEQGFAAPLRAVADRAGVSAALIVHYFGSHDGLRRACDERFDELTTELKTDVLDPVAGPAEARRQSDDIAHYAPMIGYLIRVLRAGDAASIRFVDRMSEAAEQYLARGVEAGMIRPTGDEPARARTLVAMSLGAVMLGFPTLDGRIDLETLPERLDEYRGRSLVPMLEIATYGYLTDSRILDALTHDDTTDHEPTDDDITHHNAEADGHE
>NZ_CP015970.1|WP_062820825.1|3129947_3131321_-|APC-family-permease
MAKDNAAAQAPETREDSGLRRSLTLRDLIVYGLLFIGPIAPMGTFGVLDARSGGAIGLVFVVATLAMAFTAWSYARMSRAVPLAGSVFAYAAAGLGRRPGFIAGWMIGLDYLFIPSMASLFTGIAAHQLIPAVPVWVFTLIGILIITGLNLAGVKTAAIVGFVMLAIEVAVLAVFVVAAAVVLARHGAQRPWLSPLTGLDGFDLAGILGAVSVAVLAFLGFDAIASFAEETTGSNRQVSRALQFCLALAGALFVVQTYLGALLSPLTPAYLNAHQGEQGTAFYQLLDTQIGTWFGTTVTLIKAVGPVFSALVAQAAVSRLMFGMARDGALPKALATVDPRTRTPRTAVLVSAVFTILIAIAAAVREDGLEVLSSMVTVGALVGFLFLHAAVIGYYVRGRRTEQRTRHIVVPVVGAVIIAIVLALAAHLALAIAAVWLAIGVVVLVIRESRRQDPQRS
>NZ_CP015970.1|WP_015069359.1|3142012_3142633_+|recombination-protein-RecR
MYDGPLQDLIDALSRLPGIGPKGAQRIAFHILDASQEEVDALADTLREVKEKAKFCSVCFNVSADETCRYCRDSRRDQSVICVVEESKDVIAVERTREFRGLYHVLGGAISPLDGKGPADLHIRELCTRLADGVVTEVILATNPNLEGEATASYLSRLLTPMGVKVSRLASGLPVGGDLEYADEVTLGRAFEGRRYVSAEPDARTA
>NZ_CP015970.1|WP_062820098.1|3142694_3143009_+|thiamine-binding-protein
MIAAFSLVPSGGRASREDGGVAEAVAAAVRVIRESGLPNRTNSMFTEIEGSWDECMDVVKRATEAVAEYGTRVSLVLKADIRPGRTGEMTGKLERLEAEISKQA
>NZ_CP015970.1|WP_062820099.1|3143045_3144269_-|MFS-transporter
MTSAASATRFAPPRQAVRARMGTLMLFATNGLTFASLIPRYPEIKADLGASQTLWGLAVGIGPIGGLALGLATARLMSRFGSRNVAAWPQILSTAGLLLMANAPHVGWVFVAMIAMSAFDAVTDTAMNYQALRVQEMYKRSIINTFHGWWSVGAVLGGFIGSAMAQWRVDINLQASLTMVVLALVCALSWSLMLPGRDTGTDRSEAGGDQRKARVPATTWLHIVGLGLLGALAGGIEIGGSTWAPLYMDAQFNSTPFIAGMGFTILMVAETAGRLIGDLIVNRFGQAFAVAQGSVICLIGMAVAIAWPTTASTLIGFAAAGWGVATIIPLAMNVADSLPGVRSGVGLTIATWVMRLGFMLFPIGIGALGDAVALRWAMICLPAGALVMLALVPLVGAGRRRRAPEAV
>NZ_CP015970.1|WP_062820100.1|3144413_3146246_-|beta-galactosidase
MAENAALIRADGALLRVTDNGVLTRAGVPHRIMSGSMHYFRVHPGQWRDRLRRLVDMGLNTLDTYVAWNFHQPQEGRPATFDGWCDVEGFIGMAGEEGLDVIVRPGPYICAEWSNGGLPSWLTRRTASENGVGRRPLVPRSSDPGFTRRVARWFDDLIPRIAALQACHGGPVVAVQVENEYGSYGDDAAYLTWLRTALVERGVTELLFTADGPTELMLDGGTLDGTLAAVTLGSGARAARELQQSRRPGEPFLAAEFWDGWFDHWGEKHHVRSADSASAALSEILDAGSVSIYMAHGGTNFGLWAGSNEDNGKIQPTVTSYDSDAPIAEDGRLTPKFHAFRELLGATGPLLSTEPRFLPETSVPLTPAAGLLPGLMANGIPTPRTPAPASFEQLRLDAGISVHRARPVLPHGPVTLRITDLADRAVVFVDGERVGALEGPGQITVEGHGRRVDLLLIVEAYGRINYGPLLGAPKGLLGPVMVERRMIHGWWNRAVPLQDWGDLELARAMAAGDDVNNEGTGFATASWSVEEPADTHLMLPGSGRGYCWINGFLLGRYDERGPQCSLYCPAPLLHPGSNTVTVLETEHLGDSVEMRQHPDLGPTEEYIEQF
>NZ_CP015970.1|WP_062820101.1|3146400_3147027_+|PadR-family-transcriptional-regulator
MSIRFAILALLDERASYGYEIKAEFDRRTNRTWPLNIGQVYTTLDRLERDQLVSRGSENAEGRVMYEITPGGSRAVSDWFASVIPDNPQRDELAIKIAMAATRPGCDVGAIIQNQRRESMRALQNHYQALRGIDEEDLAGELVIQSLIYSSEAQIRWLDHCETAALRASRSASRGAGGPGGAGTPRATGADAAAPAGKRATRITRDAR
>NZ_CP015970.1|WP_015069364.1|3147023_3147803_+|ABC-transporter-ATP-binding-protein
MTAPVRAADRPEAPAGRTVLSLDHVSRTFEAGSQPVHALSDVCIGVDPGAFISVMGPSGSGKSTLLALAGGLDQPTAGAVSVCGQPLAGLSRDDLARIRRRQLGFVFQDFNLVSTLTALENVALPLELDGVGARQARTVAEEALDRVGLPELGDRFIEEMSGGQQQRVAIGRAIVGDRRLLLADEPTGALDSATGDEIMALIRKLADEGVAVVLVTHEARHAAWADRVVFLRDGRLVDESESESDPMSLLAEGPRRGSW
>NZ_CP015970.1|WP_062820102.1|3147802_3150544_+|FtsX-like-permease-family-protein
MHRRALPAGRPGAAQGRGRASRRLVVRLARRDIARHRARAVLVMVLVALPVAMICGLAVIWNLTGSTVDDYVEQQFGDADVIVAPLSDWDGHCRQISLGDGSCADGSKKLSAADAARQKATLATVRIPGDTLHPVRTKGVTAHWKGLDVDAQVTGADQLRLRTQQISLPKGATAMPGAHEIWINAEAAHRYGWDVGATVQVSGATYRVTGLVRAASWPAVQIWVGPDHPLAGGGDLTWYGTGPTPSSVRVKGLNDEGLGVMDRAGYRTVQMAGTATEETTRIAVAFAIGALAALVTATIAGAAFAIGARQQRRGLALLGATGADRRVLVRLVRSQGVLLGLGGALAGAALGTALGEGFVAWRNARTLNFPQPLAIPWAPLAGAVVLGVAAATVAAWVPAHAVARQDVLAGVRSAETASRPARFPWVGLGLIVVGIAVGTWAVVGYHRSHPSPDDVSGTEQLMIPLVIGIVALFVGVVASLSWMLSRIARPGFRGPLALRFALRDLARNRGRGVACVAASMAVMTLFSAVLVLMATQDRTDVAAYRPSLPTGVGVLKGSDDSMHPIDDRAADQQLAAVRAEVGVSGEPVRESAVMRCAASGNSDQHIGDTGRRYCEEAMTIMVRTSAVAGAGATDPDAEGSFSFDSQHLMVDDGSLYRVLTGRAPDQRVEAALSRGVVVFDRHFAPRGTTTVVAERSTSAEDLAITRTVVPATVVPGTPGSGVPALIGRDAAARLMGVAPGRLNLAGGRTWMRLQDTPTQAQSDRINASIARATSLQQGFSYETGPSRTALAYLRWGAGLAAVLALTVAVVVLALSLSDSRASRSALASVGASSGSLRGIAAVQALVTVGLGSVLGALVGAAPMALAIWGAGPSMTLAIPWGYLVALALGVPALTGLAVRALVPAARPMLRRRD
>NZ_CP015970.1|WP_126133010.1|3150418_3152077_-|threonine/serine-exporter-family-protein
MSGTQGGTPSRSRRLWRVPLERYLRDARPLPPSRDLESVCEDEMAAAQAREVFDLIMRVTVVAVSVGASSAEAIAMGLRIADAYGINVHIDITNSSVIVTQHRSLDDDPITALRVVRTRTADYQRLGRLEQLVADVSARRIEPAPARERLNDLMTAPRLYKKWFVTVNMGVMGAAMAALYGASVLDVVIAFAAICLVDIAVQGLARRRVASFFVQAVGGAIPTAVALVLMLLRTATGMRLDLSPSLVVAAGMISLLAGTGAVAAAQDALDGYYVTSAGRFLEVLLQTGGIIFGVMTTLWIGLKLGVPGYISPQLVWTSAPWVQIVASVIASIAFGATAHSGPRTLGVCGILGGLGWSGYLVGMWLTDSMVIASGIGAVAIGLVSAAAAKRWRVPQVALVTISVVPLMPGMMLYRGLYMTMAGQLGIPAPGTGVTVLAQSLLIGVALAAGSSLGALAARPFAIPSDHRTRRAVMASWFRGSAVPRDWVPRRHRRRTPRPVPTAEPDGPEATASVPAPQHRTGGGDERPHGEAREGRDAQCQSDQVSPGDREGH
>NZ_CP015970.1|WP_015069367.1|3152233_3153037_+|HAD-family-phosphatase
MLIATDLDGTLVRSDNTISPRALKAIAAAEEAGVPVVPVTGRQFGGLRDILGAFSRYALVNNGSMGVDLADGQRTMFCETTPAATVAAFVDAVREYSPKASFAAVREEGRVFAHTDGYLELTRPDELIKDPAEYRRVEVAEIGTQDCLKLMVRSAEMPLEEFVARTLGLGVAGAHTSWSGFPMVEMCADGLTKATGLDRLTRLLGMTRADVVALGDGGNDVEMLGWAGRSFAMADGQQVARDAATDVAPPADEDGFAQVVESLLETL
>NZ_CP015970.1|WP_062820103.1|3153036_3153855_+|HAD-family-phosphatase
MFIATDLDGTLLTPSGTISARSAAAIAAAEEAGVPVVPVTARQLYGLDDLRSRLGRWALCSNGAVCWDLHAETVLFHLETSAEVTSTFARELLAVEPRTRFASIQRDGAFFASQAGYADLCVFTDHHRDPADMPRLGIEEVVGAPTLKLVARHPSLSVQELAAVARRLPSASAVHITSSGAGMLEISAAGVTKSAGLQMFADHLGMTGADAVAFGDGENDVEMLRWAGRSWAVANAVPAALEAAGKIAGSNAEDGVAQVIEELLEQRIAPVV

Crispr_ID: NZ_CP015970_11

• CRISPR_ID: NZ_CP015970_11
• CRISPR_location: 3172894-3173028
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP015970_11

Consensus_repeat	Method
GGCGGCCTTGCGTTCGGCCGCGGCCTTGGC	CRISPRCasFinder

spacers of NZ_CP015970_11

>11.1|3172924|75|NZ_CP015970|CRISPRCasFinder
GGCGCGTTCCTGGGCGGCCTTGCGTTCGGCCGCGGCCTTGGCTTTGGCGGCGGCGATCTTGGCGGCGCGCTCCTC

CRISPR arrays and Neighbor proteins around NZ_CP015970_11

CRISPR arrays

The CRISPR arrays of NZ_CP015970_11

>merge|NZ_CP015970|11|3172894-3173028|CRISPRCasFinder
GGCGGCCTTCTGGGCGGCGGCGGCCTTGGCGGCGCGTTCCTGGGCGGCCTTGCGTTCGGCCGCGGCCTTGGCTTTGGCGGCGGCGATCTTGGCGGCGCGCTCCTCGGCGGCCTTGCGTTCGGCCTCGGCCTTGGC

>NZ_CP015970|11|11|3172894-3173028|CRISPRCasFinder
GGCGGCCTTCTGGGCGGCGGCGGCCTTGGC	GGCGCGTTCCTGGGCGGCCTTGCGTTCGGCCGCGGCCTTGGCTTTGGCGGCGGCGATCTTGGCGGCGCGCTCCTC
GGCGGCCTTGCGTTCGGCCTCGGCCTTGGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015970.1|WP_062820108.1|3167601_3168486_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176125
NZ_CP015970.1|WP_062820111.1|3171607_3171967_+|CrcB-family-protein	unknown	unknown	gnl|CDD|223317
NZ_CP015970.1|WP_062820105.1|3161211_3163152_+|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl|CDD|240528
NZ_CP015970.1|WP_062820830.1|3181680_3182337_+|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	unknown	unknown	gnl|CDD|188632
NZ_CP015970.1|WP_028700353.1|3168994_3170290_-|transporter	unknown	unknown	gnl|CDD|238538
NZ_CP015970.1|WP_062820115.1|3184382_3185054_+|hypothetical-protein	unknown	unknown	gnl|CDD|225500
NZ_CP015970.1|WP_062820110.1|3171194_3171611_+|CrcB-family-protein	unknown	unknown	gnl|CDD|376809
NZ_CP015970.1|WP_028700350.1|3174130_3174991_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381314
NZ_CP015970.1|WP_062820116.1|3185191_3186166_+|hypothetical-protein	unknown	unknown	gnl|CDD|270360
NZ_CP015970.1|WP_062820114.1|3182427_3184110_+|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|234679
NZ_CP015970.1|WP_015069390.1|3177378_3177840_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl|CDD|176643
NZ_CP015970.1|WP_051281547.1|3168482_3168992_-|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NZ_CP015970.1|WP_062820109.1|3170583_3171141_+|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NZ_CP015970.1|WP_082816034.1|3166265_3167516_-|MFS-transporter	unknown	unknown	gnl|CDD|340882
NZ_CP015970.1|WP_015069392.1|3178807_3181402_-|DUF3516-domain-containing-protein	unknown	unknown	gnl|CDD|378795
NZ_CP015970.1|WP_062820113.1|3178033_3178558_-|2'-5'-RNA-ligase	unknown	unknown	gnl|CDD|379265
NZ_CP015970.1|WP_062820829.1|3176128_3177217_-|cutinase-family-protein	unknown	unknown	gnl|CDD|366455
NZ_CP015970.1|WP_062820106.1|3163382_3165020_-|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|200578
NZ_CP015970.1|WP_062820107.1|3165155_3166193_-|TerC-family-protein	unknown	unknown	gnl|CDD|274743
NZ_CP015970.1|WP_062820112.1|3175404_3176118_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP015970.1|WP_062820108.1|3167601_3168486_+|LysR-family-transcriptional-regulator	gnl|CDD|176125	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold. GltC, a member of the LysR family of bacterial transcriptional factors, activates the expression of gltA gene of glutamate synthase operon and is essential for cell growth in the absence of glutamate. Glutamate synthase is a heterodimeric protein that encoded by gltA and gltB, whose expression is subject to nutritional regulation. GltC also negatively auto-regulates its own expression. This substrate-binding domain has strong homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.18363e-58
NZ_CP015970.1|WP_062820111.1|3171607_3171967_+|CrcB-family-protein	gnl|CDD|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	2.50461e-21
NZ_CP015970.1|WP_062820105.1|3161211_3163152_+|murein-biosynthesis-integral-membrane-protein-MurJ	gnl|CDD|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	9.17415e-87
NZ_CP015970.1|WP_062820830.1|3181680_3182337_+|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	gnl|CDD|188632	cd00452, KDPG_aldolase, KDPG and KHG aldolase. KDPG and KHG aldolase. This family belongs to the class I adolases whose reaction mechanism involves Schiff base formation between a substrate carbonyl and lysine residue in the active site. 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase, is best known for its role in the Entner-Doudoroff pathway of bacteria, where it catalyzes the reversible cleavage of KDPG to pyruvate and glyceraldehyde-3-phosphate. 2-keto-4-hydroxyglutarate (KHG) aldolase, which has enzymatic specificity toward glyoxylate, forming KHG in the presence of pyruvate, and is capable of regulating glyoxylate levels in the glyoxylate bypass, an alternate pathway when bacteria are grown on acetate carbon sources.	1.38215e-25
NZ_CP015970.1|WP_028700353.1|3168994_3170290_-|transporter	gnl|CDD|238538	cd01118, ArsB_permease, Anion permease ArsB. These permeases have been shown to export arsenate and antimonite in eubacteria and archaea. A typical ArsB permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump (ArsAB). The ArsAB complex is similar in many ways to ATP-binding cassette transporters, which have two groups of six transmembrane-spanning helical segments and two nucleotide-binding domains. The ArsB proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life.	7.71721e-85
NZ_CP015970.1|WP_062820115.1|3184382_3185054_+|hypothetical-protein	gnl|CDD|225500	COG2949, SanA, Uncharacterized membrane protein [Function unknown].	1.85541e-44
NZ_CP015970.1|WP_062820110.1|3171194_3171611_+|CrcB-family-protein	gnl|CDD|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	7.68438e-24
NZ_CP015970.1|WP_028700350.1|3174130_3174991_-|aldo/keto-reductase	gnl|CDD|381314	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR). Xylella fastidiosa phenylacetaldehyde dehydrogenase is a founding member of aldo-keto reductase family 13 member B1 (AKR13B1). phenylacetaldehyde dehydrogenase (EC 1.2.1.39) catalyzes the NAD+-dependent oxidation of phenylactealdehyde to phenylacetic acid.	1.67163e-87
NZ_CP015970.1|WP_062820116.1|3185191_3186166_+|hypothetical-protein	gnl|CDD|270360	cd13642, PBP2_BCP_1, Substrate-binding domain of osmoregulatory ABC-type glycine betaine/choline/L-proline transport system-like; the type 2 periplasmic-binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to certain quaternary ammonium compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine, proline betaine, choline, and carnitine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.75439e-66
NZ_CP015970.1|WP_062820114.1|3182427_3184110_+|glucose-6-phosphate-isomerase	gnl|CDD|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
NZ_CP015970.1|WP_015069390.1|3177378_3177840_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl|CDD|176643	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea. PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.	5.03587e-54
NZ_CP015970.1|WP_051281547.1|3168482_3168992_-|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	0.000488526
NZ_CP015970.1|WP_062820109.1|3170583_3171141_+|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	1.85295e-07
NZ_CP015970.1|WP_082816034.1|3166265_3167516_-|MFS-transporter	gnl|CDD|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.12884e-59
NZ_CP015970.1|WP_015069392.1|3178807_3181402_-|DUF3516-domain-containing-protein	gnl|CDD|378795	pfam12029, DUF3516, Domain of unknown function (DUF3516). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 460 to 473 amino acids in length. This domain is found associated with pfam00270, pfam00271.	0
NZ_CP015970.1|WP_062820113.1|3178033_3178558_-|2'-5'-RNA-ligase	gnl|CDD|379265	pfam13563, 2_5_RNA_ligase2, 2'-5' RNA ligase superfamily. This family contains proteins related to pfam02834. These proteins are likely to be enzymes, but they may not share the RNA ligase activity.	3.87819e-05
NZ_CP015970.1|WP_062820829.1|3176128_3177217_-|cutinase-family-protein	gnl|CDD|366455	pfam01083, Cutinase, Cutinase.	1.92465e-11
NZ_CP015970.1|WP_062820106.1|3163382_3165020_-|polysaccharide-deacetylase-family-protein	gnl|CDD|200578	cd10954, CE4_CtAXE_like, Catalytic NodB homology domain of Clostridium thermocellum acetylxylan esterase and its bacterial homologs. This family is represented by Clostridium thermocellum acetylxylan esterase (CtAXE, EC 3.1.1.72), a member of the carbohydrate esterase 4 (CE4) superfamily. CtAXE deacetylates O-acetylated xylan, a key component of plant cell walls. It shows no detectable activity on generic esterase substrates including para-nitrophenyl acetate. It is specific for sugar-based substrates and will precipitate acetylxylan, as a consequence of deacetylation. CtAXE is a monomeric protein containing a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold as other CE4 esterases. However, due to differences in the topography of the substrate-binding groove, the chemistry of the active center, and metal ion coordination, CtAXE has different metal ion preference and lacks activity on N-acetyl substrates. It is significantly activated by Co2+. Moreover, CtAXE displays distinctly different ligand coordination to the metal ion, utilizing an aspartate, a histidine, and four water molecules, as opposed to the conserved His-His-Asp zinc-binding triad of other CE4 esterases.	4.88308e-61
NZ_CP015970.1|WP_062820107.1|3165155_3166193_-|TerC-family-protein	gnl|CDD|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	7.91866e-132

Protein sequences

>NZ_CP015970.1|WP_062820111.1|3171607_3171967_+|CrcB-family-protein
MTWLFVSLAGGVGAATRFLVDSWIARHNRLNTPMGTIVINVTACFILGLATGLGLDHTMTASWTSVIGTGFCGGYSTFSTASVEGARLFLSGRARAGLLHAGGMLVLGTAAAALGMLLG
>NZ_CP015970.1|WP_062820110.1|3171194_3171611_+|CrcB-family-protein
MWALALLVGVGGCVGTLIRALLGSAFGADHGHFPVMTLTINLVGSVVLGLLLEGLARTGEDVGPRKAVRLGVGTGVIGGFTTYSTFAVETDRLLGGGSPVIGLVYALVSVAAGLLCAAAGILVARKAFRARPMDEEGR
>NZ_CP015970.1|WP_062820109.1|3170583_3171141_+|universal-stress-protein
MAERSVPQPGLERLVDFRSGPVIAGFSPGQHPLVAVTAARLAEALGGGTVHLAFVDTNRYAVEEFGDGTVRHAPIDPDAEAHDWRSTREDLERQAAETFAGAGMTVDWRLWYLAGRPDRALTHLARALDASVFVVGSRSSRPGRRIRELAEGSVSNHLAHHQHRPVLTVPIEVVDWKDARTPWTP
>NZ_CP015970.1|WP_028700353.1|3168994_3170290_-|transporter
MNTWAAEAIAAAVLLLVLVFAVIRPKNLPEALPAVPGALLLCLIGAISWSEAWSQVARMLPTVLFLAGVLMLAHLCQAEGMFDAAGRLMARGSHGSPVRLLGLVFVVASVTTALLSLDATIVLLTPVIFTTAARVGARPKPFIYGTAHLSNSASLLLPVSNLTNLLALSAAGISFPRFAALMVGPWLVAIGVEYVAHRRYFATELSVSSGYPASSGTIPGTDDAGQPAPVFSLVVLGLTLAGFVVLSVLGAEPFWAALVGVVVIGGKRLIRGDGSRRDELKELGAAANPFFLLFVLSLSIIVAAVVDHGVAAAMRTVVPGDQSLLSLLILVLIAALLANLVNNLPAVLVMLPLVAPVGPVAVLAVLIGVNVGPNLTYVGSLATLLWRRIVAAHDHRTSTGEFTRLGLITVPICLVLCTMALSAAASLMGVS
>NZ_CP015970.1|WP_051281547.1|3168482_3168992_-|universal-stress-protein
MRVLAWIAPATWPAVVDALLERHGDDEITLVAAADAYADFPPGRLGGLLGRRPPKAGPKESELASEMARDLLHQASERLRGDAWATVLIGPTERVITEAAADADHLVMARDGDRSRLGPPSLGDHSRFVIDHAPCTVELVWPGKAPGLATIPPPPDDARQRQPRGRSNA
>NZ_CP015970.1|WP_062820108.1|3167601_3168486_+|LysR-family-transcriptional-regulator
MLSDDLSWFLILADSEHIGDAAAQLRMPQSTLSRRLGRLEQRLGTTLFDRHGRSLTLNTRGAALRRRLRAAVIQLDLAESEVLRLLDPETGLVRFDFMHSFGTWLAPRLIHGFVDDHPRADIHLHQGIGRDLIARVRDDEADVALCSPRPEGEDLGWLEVLRQPMAACLPSDHRLAHRRRIRLADIASEPFISTPAGFNSRDLLEGIAADEGVDIHVAFESDELSTVAGLVVSGVGVALLPADDPYLQLPGAVFIPLTTRRTREVGLIWRADQDPASTPGLFLDSARRVLSLMS
>NZ_CP015970.1|WP_082816034.1|3166265_3167516_-|MFS-transporter
MTATTSPATLTVPTPHSSSPDPLPEGLSQGEPGYRRASLALLAAGLASFNALYCTQALMPTLTSQLGATPAQASLTVSAATGILAITILPVSVLSERFGRGRLMTISAMAAVIVGLLLPLAPSLGWLVAGRGLQGLLVAGVPATAMAWLSQEIHPRHLPRAMGLYVAGNTVGGLLGRLIPSGVLQFSGWRPALGIDMAFALVCTVAMVTLMPAERRFVPKQLRPGNELRTMGRQWADRRLAGLFGIGFIFMGVFVSLYDFLGYRLTARFGMPPSLIGLVFLLYLFGTLASARAGHLTATRGRGPAMLIGAAMAIVGMPLVASGLLWLTLPGVALFTYGFFTVHSVASGWVGALAPRARGEASGTYLACYYLGSSILGYLSGHVMHAFGWTGLVMWLVGLILIGCALSAMVVRSARS
>NZ_CP015970.1|WP_062820107.1|3165155_3166193_-|TerC-family-protein
MSPIVWTLTIVGLLALLAVDFMTHVRKAHAPTLKEAAIWSAVFVGVALAFGAGVWLTGGAELGKEYFAGYVTEKALSVDNLFLFLVIMTSFAVPRANQQKVLMFGVIFSLIARTGLILAGAALVNSFSWVFYIFGIILLFTAGSMVKGHGKEEDPEAGDNVMVRLARRFIHSTDYYDGDRMTTIHEGRRAMTPMMLVMVAIAGTDVLFAVDSIPAIFGLTQNAYIVFTATAFSLLGLRQLYFLLDGLLDRLVHLSIGLSVILGFIGVKLILHALHENQIPFINGGQPLHVPEVSTDLSLLVILGVLTVTVITSLISTRRAEKREAVDVESSGEPADEPQSVNSPS
>NZ_CP015970.1|WP_062820106.1|3163382_3165020_-|polysaccharide-deacetylase-family-protein
MNLTRRGFIGASSGLLAALSLSACNGSDGRPGSSGAGNKGSKGTPAPASMTKVDAALVSGAIPTKLTASNPRTVSAAVPQIPKARNLTQALEVVRERTLRQAAWDKASAVDISTSYVAASADVIGVLVKATTTKAGKETTALTSLWYNAQLSQTFSPSVLISWPGWADFAKAVGKAASDASLDKAKVLKALQDTPAPYGTGPAIAFDTAGGVVVNFPPGAVKAEPTEVRVPKKTVTPLLSDFGVLAEGASNHPSAFSGTPTTTLTWWKPGQNKPRPSGSPNLRPLPGDSTGPVTTQSAAPSASASPSASPSPSAGASGPEHPSTAIGIDCVANKAVALTYDDGPGPETATVLAALEKHKGAATFFEMGNSIDAYPKTTVLVAASGYEIGSHTVTHPDLATLGSERLKQEITGNSARIKKLIGRSPLLLRPPYGSHNEAADEVASADGMAIVNWSVDTEDWKTKSTSATEQKVFNDVKIYTEPIILMHDIHDFTVAAAGPIIEKLTAEGYKLVTVSEMTLNTGGFRTGHGYCRGTSLVQDGYLCKG
>NZ_CP015970.1|WP_062820105.1|3161211_3163152_+|murein-biosynthesis-integral-membrane-protein-MurJ
MGSSSAETDVYDLLKVPEGPRSPTGFFDVYDSLDVDATMLRSDLVARIHAIERAEDQERRARMRREAARGPRRAASPDSATTGMGLPAVGTPVAADGTEIAAGTLPGEAAKSEAEQTASLKRESSIMAAGTLISKILGLVRGFLLSFVMLGTGLAYDTFQAANTLPNVIFNLLSAGVLNAILIPQIVKAMKRKDGGREFVDRLLTVSFAAVVLVAVLATVGTPWLLNLSFSGTGPARTLAVMFGFICMPQILFYGVYAILGQVLNARGQFAAFMWSPVLANVIQISGLVWCVAQFGRHGDPAGWSSPMVWVVAGTTTLGIAVQGLSLIIPLWRGGFRWRPRWGIRGYGLGAAGRLTVWTFSALLIAQMVGIATKKMLSWVRVHNPQASSISAYDNAFLIFMLPHGLITVSILTALFPRMSSAHADGDTDGLRSLVRRGLTSPAVAIIPCSIAMVVLARPGVQTILSLQPGQVIPQAGAVAIMGIGLLPFGISTLQQRYCFAREDGRQNLIMQSILSGTQLLVASLVFVVPASIALWTVAAAQTLANIAVSVVWIVVASRQMSGLGMRSIAGQWLRLLAAAVAAGVPTGLAVWAIGLLGEGRLLNLLNLAVGGCLFVGLFLLVAKLLKIDEVGSLVTPILRKLHVVK
>NZ_CP015970.1|WP_028700350.1|3174130_3174991_-|aldo/keto-reductase
MKYRNLGPYKASAISYGNMPLSIEGRPDRATAIDVIHAALDAGVTHIDTAWAYYPSGEEPQYGEGLAAEALRTWDGDRSAISIATKVGHYRNFTDGKPTWAVDDEPEHLKERAHESARALGVETIDLLYSHRPSPDVPYEKVIGALADLLDEGLTRTVGISNVNPDQIRLAHRILGDRLVAVQNQFSPGFRSSEPEIDVTGELGLAFVAWSPLGGYRKPLDEPKFAPFQKIADARGISRAQVILAWELARAPHVIPIPGSHRTATILDSLKAADLELTDAELASLG
>NZ_CP015970.1|WP_062820112.1|3175404_3176118_+|hypothetical-protein
MIQLLIGALALGIAGFDPLGSVVLVAALGMGTGRRGVLSLGVTAVLTSEVLGLAGALGLTALARDAGVHPPHVPHPVWLVAVTLVGAGLAVWALFYGRRRSGAEDPGVDRSGSAGRARPRSASAPALALSGLVVGLSSLADPAFWAMVVHAARWPRASWAALEASIWVVCSHSLLIVLVICYLAVGPQQVNRLVDQVMGRHAVAVRRTVAIIAGLAGVLLLVDVGVAVATGAWLFAL
>NZ_CP015970.1|WP_062820829.1|3176128_3177217_-|cutinase-family-protein
MGWKADPVASGKASTQPCASVLFVGVRGSGEEEPYGKTITGVRDGLAARWEGRGSVRQVWLDYPAVDPHTLQNESLTRLLFDEKMPSTKYFDSAATGASRLVSLLREQGRRCPSEWVVLAGYSQGAQAITSALSQTDVSARLAGAILAGNPSHYPGQNVQELSGSAPLTSIGLASLLYDLRARAARVEGSRDDQVKELIQATIDLHNDDQNLAELRSAMKREKAVVPASAYPASYSICQEGDPVCDAAPAMTRILTVQSTWEQELRKASSAHAVYTPEVLKTSLNATANRMNAVARADAKGNPVPRGQQVDVTVNRWGPAQIGVAVAAGVAGLLIGLGAATLRGRRRRAVSGRAASKRSKRH
>NZ_CP015970.1|WP_015069390.1|3177378_3177840_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MELTSTSIADGQPIDSRYAHPNVGGRNVIPQLSWTQGPVGTHSYAITIYDPDAPTGSGFWHWILADIPADVTEIPEGGPLPEGVRQWVNDAQEEGYSGPFPPPGPSHRYIHTVHAMPAEHLPAADEAANVQVRFAIHTSELAEASLTGTYQVD
>NZ_CP015970.1|WP_062820113.1|3178033_3178558_-|2'-5'-RNA-ligase
MSLSVCLLFDRRTDRALRGLWGRLESIGVSTLLTHTHEKHLPHLSYAVLRNWEIDRVVEAVASLPAGDPIPLHFDTVGHFHRGRAALIVAPRADLLARQQRVVDALTSTGADLHHYYLPGRWVPHTSLATHVKAAQLAAMTSLAHDVLPLDATAVGASIIDSGTGLRHDLAMIP
>NZ_CP015970.1|WP_015069392.1|3178807_3181402_-|DUF3516-domain-containing-protein
MRLAEALDDMLDARPPVETDRGERPAGWDSPGARPIDPDMALDHIERAVSRDGLTMYDHQEEAILEILTGSHVIVTTPTGSGKSLIAAAAHFACVAGGGRSYYTAPIKALVSEKFFDLCAIFGAARVGMVTGDASVNADAPIICCTAEILANIALREGRHAAVDQVVMDEFHFIGDPDRGWAWQVPLSELPQAQQIIMSATLGDVSQLAEDLTASTGRPTTVITGVTRPVPLLYEWSMESDHDTVEQLVEEQKAPVYIVHPSQKAALERAQSLTSMKLVSTEERHGIAAEIADFRFSKGFGSTVRKFITSGIGVHHAGMLPKYRRLVETLAQQGRLKVICGTDTLGVGINVPIRTVMFIALTKFDGRRMRVLKSREFHQIAGRAGRAGFDSVGYVVAEAPEHVVANAKAAAKAGDDPKKQRRIKKQKAPEGFINFDEETFKKLIASTPETLHARMRITDAMLLNLLSRDEDTVAAVKHLVDAATSSAAERKRLYRRAIQLGRALLHSGVVHRLDEPTPGGRRYAMNEDLQEDFALNQPLSAFAAEAIETLDPDSATHALDVVSVIEATLDNPMTLLYAQQRLARGEAIGELKAEGYDYEDRMAAVEDVEWPRPLGETLDALFEIFAPSHPWVPADALSPKSIVRDMYERAMTFGEFCAFYKVQRSEGLVLRYLTDAYRALRQTVPEAERTEELSDLISWLGEVIRTTDSSLIDEWEALTHPEESEEPEEVRPVHTFTSNQRAFRVALRNAMFRKVILAADDDFEGLAALEPDGSPMKARDWEDALGSYWDEHEEINDGPDARSPAMLVIENESGRRDSRIRLVRQIIDDPEGNHDWSITATVDLDECDEADDLILRTRAFSRLD
>NZ_CP015970.1|WP_062820830.1|3181680_3182337_+|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase
MSSQPAPESGRLPLPARMLTSQVVAVLPDEPVASMMAPVEVMLQEGIQVFSLPAGDVERLTTLHTIFGARGSFGVHGVIDPDGIDALIATGIEFALPVGPTPQVLAALRAAGVPAAPDALTPTEVRAVRAAGADAVQVVPADIGSATYGPALAELAPGVPCLPRGGVGSYALRKWISSGAPAACLDEILVGDACTDSALPALRERCRSVLAVIADERA
>NZ_CP015970.1|WP_062820114.1|3182427_3184110_+|glucose-6-phosphate-isomerase
MTTPVDATSTPAWDKLAQLQPTIVDGPHVLRRWFDADPGRAQRYTFEAADLHVDLSKNLLTDEVRDALLELADQVHIPARRDAMYSGEHINVTEDRAVLHTALRRPATDALTVDGQDAVADVHEVLERIYDFARKVRSGEWKGVTGKPIRTVVNIGIGGSDLGPVMAYEALKPYVQEGLEARFISNIDPTDAAVKTADLDPETTLVIVASKTFTTLETLTNARCVRSWLLDGLVAAGAVEDTEEARNAAVAKHFVAVSTALDRVAAFGIDPDNAFGFWSWVGGRYSVDSAVGTALAVAIGPEGFADFLSGFHAIDEHFATAAPEKNVPLLMGLLNIWYVNFWNAHSHAVLPYSQYMHRFPAYLQQLTMESNGKSVRWDGTPVTSQTGEIFWGEPGTNGQHAFYQLIHQGTRVIPADFIAVANPAHPTKDGDTDVHELFLSNFFAQTAALAFGKTAAEVEAEGTPASIVPARVFSGDRPTTSIMADELSPKVLGELIALYEHITFVEGVVWGIDSFDQWGVELGKKLALEIAPAVSGDDAALASQDSSTQGLVSWYRAHRS
>NZ_CP015970.1|WP_062820115.1|3184382_3185054_+|hypothetical-protein
MATRGRFRWLRRGIIGTVGLAILVLGGPWALAEGLSLGKVGPAAQAPERDVAIVFGAAVLPDGTPSNYLRGRLDVAADLYERGAVRAILVSGDNSTQYYNEPDNMKRYLVDSRGIPTEKVVTDYAGFDTYDTCVRARRIFGITSATLVTQDYHLTRAVATCRMTGGMNVVGAPDTSRAHDRTWWYGWSREFGARLKMLYDVVTHRTPTLGAQETGIRDALGKR
>NZ_CP015970.1|WP_062820116.1|3185191_3186166_+|hypothetical-protein
MPFTTRTRRVAPALICAILLMVASACGASNSQSEQSAGGGSGKGEAITIGQFSWTGAAVQTQILKLIAEQHPELGVGSVDTKQLDPAPGWIGMQKGDIDVMPEVNLPNQQPFVDKAKSETSLVSKTYGGATQGWFVPKYLVSKGGAAEGLTSVDQLKDKKWADAVGGKLYDSDAGWVTTKQNDKRIKGFNLAITHSPSSEAATLAQIKRSYQRKEPVLAYLYHPHWVFEKYDLVQLKEPKPYQTGCFEGSENDCAIPTLSAYVGARKDLKERAPKYYAMLQKFNISLTDVEKLLAQQQDSNASPEKIAKEWVAANQSTIDSWIK

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP015970_5	5.4|1999203|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999203-1999239	37	NZ_CP015970.1	3462734-3462770	1	0.973
NZ_CP015970_4	4.23|1993944|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1993944-1993978	35	NZ_CP015970.1	3491875-3491909	2	0.943

1. spacer 5.4|1999203|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to position: 3462734-3462770, mismatch: 1, identity: 0.973

tcgcatggaatgaaatgcgcgggatgaaaccggagtt	CRISPR spacer
tcgcgtggaatgaaatgcgcgggatgaaaccggagtt	Protospacer
****.********************************

2. spacer 4.23|1993944|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to position: 3491875-3491909, mismatch: 2, identity: 0.943

ttcggccactgcgactcggtctcgatgcggtcggc	CRISPR spacer
ttcggccactgggactcggtctcgatgcggtctgc	Protospacer
*********** ******************** **

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015970_5	5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999130-1999166	37	KT221034	Streptomyces phage SF3, complete genome	11593-11629	5	0.865
NZ_CP015970_5	5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999130-1999166	37	KT221033	Streptomyces phage SF1, complete genome	29293-29329	5	0.865
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	693700-693734	7	0.8
NZ_CP015970_4	4.61|1996666|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1996666-1996700	35	NZ_CP044550	Hydrogenophaga sp. BPS33 plasmid pBPS33-1, complete sequence	73368-73402	7	0.8
NZ_CP015970_5	5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999130-1999166	37	AY320035	Bacteriophage VWB, complete genome	34920-34956	7	0.811
NZ_CP015970_5	5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999130-1999166	37	NC_005345	Streptomyces phage VWB, complete genome	34920-34956	7	0.811
NZ_CP015970_5	5.6|1999349|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999349-1999383	35	MN842294	Leclercia adecarboxylata strain G426 plasmid pG426-FII, complete sequence	47420-47454	7	0.8
NZ_CP015970_2	2.1|621986|37|NZ_CP015970|CRISPRCasFinder	621986-622022	37	NZ_CP029356	Azospirillum sp. CFH 70021 plasmid unnamed1	17264-17300	8	0.784
NZ_CP015970_4	4.31|1994519|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994519-1994553	35	MG962376	Mycobacterium phage Thumb, complete genome	13462-13496	8	0.771
NZ_CP015970_4	4.31|1994519|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994519-1994553	35	MN010756	Mycobacterium phage Phreeze, complete genome	13461-13495	8	0.771
NZ_CP015970_4	4.31|1994519|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994519-1994553	35	MH509445	Mycobacterium phage Cborch11, complete genome	13462-13496	8	0.771
NZ_CP015970_4	4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994732-1994764	33	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	232587-232619	8	0.758
NZ_CP015970_4	4.38|1995017|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995017-1995051	35	MG962376	Mycobacterium phage Thumb, complete genome	13462-13496	8	0.771
NZ_CP015970_4	4.38|1995017|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995017-1995051	35	MN010756	Mycobacterium phage Phreeze, complete genome	13461-13495	8	0.771
NZ_CP015970_4	4.38|1995017|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995017-1995051	35	MH509445	Mycobacterium phage Cborch11, complete genome	13462-13496	8	0.771
NZ_CP015970_4	4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995230-1995262	33	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	232587-232619	8	0.758
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	52441-52474	8	0.765
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	826089-826122	8	0.765
NZ_CP015970_4	4.21|1993803|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1993803-1993836	34	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	212570-212603	9	0.735
NZ_CP015970_4	4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994086-1994120	35	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	452516-452550	9	0.743
NZ_CP015970_4	4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994086-1994120	35	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	503096-503130	9	0.743
NZ_CP015970_4	4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994086-1994120	35	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1222093-1222127	9	0.743
NZ_CP015970_4	4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994086-1994120	35	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5268856-5268890	9	0.743
NZ_CP015970_4	4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994732-1994764	33	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	231314-231346	9	0.727
NZ_CP015970_4	4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994732-1994764	33	NZ_CP015746	Shinella sp. HZN7 plasmid pShin-10, complete sequence	91574-91606	9	0.727
NZ_CP015970_4	4.35|1994801|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994801-1994835	35	NZ_CP019064	Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence	136386-136420	9	0.743
NZ_CP015970_4	4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995230-1995262	33	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	231314-231346	9	0.727
NZ_CP015970_4	4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995230-1995262	33	NZ_CP015746	Shinella sp. HZN7 plasmid pShin-10, complete sequence	91574-91606	9	0.727
NZ_CP015970_4	4.42|1995299|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995299-1995333	35	NZ_CP019064	Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence	136386-136420	9	0.743
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	994185-994219	9	0.743
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	969542-969576	9	0.743
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	994185-994219	9	0.743
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	LR606149	Rhizobium sp. Q54 genome assembly, plasmid: 6	143868-143902	9	0.743
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP010728	Phaeobacter inhibens strain P88 plasmid pP88_c, complete sequence	124629-124663	9	0.743
NZ_CP015970_4	4.72|1997463|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1997463-1997497	35	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	13449-13483	9	0.743
NZ_CP015970_4	4.74|1997607|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1997607-1997642	36	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	683360-683395	9	0.75
NZ_CP015970_5	5.5|1999276|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999276-1999312	37	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	650359-650395	9	0.757
NZ_CP015970_5	5.5|1999276|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999276-1999312	37	CP017041	Propionibacterium sp. oral taxon 193 strain F0672 plasmid unnamed1, complete sequence	59440-59476	9	0.757
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	MN729597	Pseudomonas phage CHF19, complete genome	8534-8567	9	0.735
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	MN729598	Pseudomonas phage CHF21, complete genome	8198-8231	9	0.735
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	MN729595	Pseudomonas phage CHF1, complete genome	8645-8678	9	0.735
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	KJ507099	Pseudomonas phage phiPSA2, complete genome	8115-8148	9	0.735
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	MN729596	Pseudomonas phage CHF7, complete genome	8208-8241	9	0.735
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	MN729600	Pseudomonas phage CHF17, complete genome	8534-8567	9	0.735
NZ_CP015970_5	5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000069-2000102	34	MN729599	Pseudomonas phage CHF33, complete genome	8645-8678	9	0.735
NZ_CP015970_5	5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000139-2000175	37	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	298898-298934	9	0.757
NZ_CP015970_5	5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000139-2000175	37	MN586047	Gordonia phage EMoore, complete genome	10286-10322	9	0.757
NZ_CP015970_5	5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000139-2000175	37	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	64675-64711	9	0.757
NZ_CP015970_4	4.22|1993873|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1993873-1993907	35	NZ_CP051543	Paracoccus sanguinis strain OM2164 plasmid pPspOM122, complete sequence	33028-33062	10	0.714
NZ_CP015970_4	4.26|1994157|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994157-1994190	34	NZ_KU130294	Pseudomonas putida strain 12969 plasmid p12969-DIM, complete sequence	192031-192064	10	0.706
NZ_CP015970_4	4.26|1994157|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994157-1994190	34	NZ_CP027170	Pseudomonas aeruginosa strain AR_0356 plasmid unnamed2, complete sequence	34456-34489	10	0.706
NZ_CP015970_4	4.26|1994157|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994157-1994190	34	NZ_CP029094	Pseudomonas aeruginosa strain AR441 plasmid unnamed3, complete sequence	324484-324517	10	0.706
NZ_CP015970_4	4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1994732-1994764	33	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	505751-505783	10	0.697
NZ_CP015970_4	4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995230-1995262	33	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	505751-505783	10	0.697
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	866551-866585	10	0.714
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	282318-282352	10	0.714
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	25777-25811	10	0.714
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	71977-72011	10	0.714
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	100932-100966	10	0.714
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	50412-50446	10	0.714
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	67330-67364	10	0.714
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NC_014035	Rhodobacter capsulatus SB 1003 plasmid pRCB133, complete sequence	33971-34005	10	0.714
NZ_CP015970_5	5.5|1999276|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999276-1999312	37	NZ_CP027024	Streptomyces sp. WAC00288 plasmid p2, complete sequence	70749-70785	10	0.73
NZ_CP015970_5	5.13|1999856|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999856-1999890	35	NZ_CP034811	Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence	117615-117649	10	0.714
NZ_CP015970_5	5.13|1999856|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	1999856-1999890	35	NZ_CP009439	Streptomyces glaucescens strain GLA.O plasmid pSglau1, complete sequence	128682-128716	10	0.714
NZ_CP015970_5	5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000139-2000175	37	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	971908-971944	10	0.73
NZ_CP015970_5	5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT	2000139-2000175	37	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	841211-841247	10	0.73
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	828405-828439	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	803696-803730	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	828405-828439	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP042276	Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence	143116-143150	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	679913-679947	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	795763-795797	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	700499-700533	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	816340-816374	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	694335-694369	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	810091-810125	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	679913-679947	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	795763-795797	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	817155-817189	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	862204-862238	11	0.686
NZ_CP015970_4	4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR	1995800-1995834	35	NC_006569	Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence	325741-325775	11	0.686

1. spacer 5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to KT221034 (Streptomyces phage SF3, complete genome) position: , mismatch: 5, identity: 0.865

aagaagagcgagacgttccggcggatcg-tcaacgcgg	CRISPR spacer
cagaagagcgagacgttccgggcgatcgttcaaggcg-	Protospacer
 ********************  ***** **** *** 

2. spacer 5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to KT221033 (Streptomyces phage SF1, complete genome) position: , mismatch: 5, identity: 0.865

aagaagagcgagacgttccggcggatcg-tcaacgcgg	CRISPR spacer
cagaagagcgagacgttccgggcgatcgttcaaggcg-	Protospacer
 ********************  ***** **** *** 

3. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.8

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcgggccgagtggctcgggcaagtcgtcgctggc	Protospacer
.***** ***.****************..* .***

4. spacer 4.61|1996666|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044550 (Hydrogenophaga sp. BPS33 plasmid pBPS33-1, complete sequence) position: , mismatch: 7, identity: 0.8

ttccagtcgagcagctcgggcggtagcgc--ccacta	CRISPR spacer
tcccagtcgagcagcaagggcggtagcacggcgac--	Protospacer
*.*************  **********.*  * **  

5. spacer 5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to AY320035 (Bacteriophage VWB, complete genome) position: , mismatch: 7, identity: 0.811

aagaagagcgagacgttccggcggatcgtcaacgcgg	CRISPR spacer
cagaagagcgacacgttccgggggatcgtgcaggcag	Protospacer
 ********** ********* *******  * **.*

6. spacer 5.3|1999130|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NC_005345 (Streptomyces phage VWB, complete genome) position: , mismatch: 7, identity: 0.811

aagaagagcgagacgttccggcggatcgtcaacgcgg	CRISPR spacer
cagaagagcgacacgttccgggggatcgtgcaggcag	Protospacer
 ********** ********* *******  * **.*

7. spacer 5.6|1999349|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to MN842294 (Leclercia adecarboxylata strain G426 plasmid pG426-FII, complete sequence) position: , mismatch: 7, identity: 0.8

cccgggcggccaggacagaaccccgccgccgtcac	CRISPR spacer
cgggtgcggccaggacacatccccgccgccgtcca	Protospacer
*  * ************ * *************  

8. spacer 2.1|621986|37|NZ_CP015970|CRISPRCasFinder matches to NZ_CP029356 (Azospirillum sp. CFH 70021 plasmid unnamed1) position: , mismatch: 8, identity: 0.784

gcggcgatccccgggtccgcgtcgcaggccagtggtg-	CRISPR spacer
agggcgatccgcgggtccgcggcgcagg-cggcggcga	Protospacer
. ******** ********** ****** *.*.**.* 

9. spacer 4.31|1994519|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to MG962376 (Mycobacterium phage Thumb, complete genome) position: , mismatch: 8, identity: 0.771

ttggcccgtcatgacgccgacgacctgatcgagat--	CRISPR spacer
atggcccgtcatgacgaggacgacct--ttgctattg	Protospacer
 ***************  ********  *.*  **  

10. spacer 4.31|1994519|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to MN010756 (Mycobacterium phage Phreeze, complete genome) position: , mismatch: 8, identity: 0.771

ttggcccgtcatgacgccgacgacctgatcgagat--	CRISPR spacer
atggcccgtcatgacgaggacgacct--ttgctattg	Protospacer
 ***************  ********  *.*  **  

11. spacer 4.31|1994519|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to MH509445 (Mycobacterium phage Cborch11, complete genome) position: , mismatch: 8, identity: 0.771

ttggcccgtcatgacgccgacgacctgatcgagat--	CRISPR spacer
atggcccgtcatgacgaggacgacct--ttgctattg	Protospacer
 ***************  ********  *.*  **  

12. spacer 4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 8, identity: 0.758

taatcaaggcggagccgcccggccccgcgccaa	CRISPR spacer
gcagataggcggagccgccgcgccccgcgccat	Protospacer
  *   *************  *********** 

13. spacer 4.38|1995017|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to MG962376 (Mycobacterium phage Thumb, complete genome) position: , mismatch: 8, identity: 0.771

ttggcccgtcatgacgccgacgacctgatcgagat--	CRISPR spacer
atggcccgtcatgacgaggacgacct--ttgctattg	Protospacer
 ***************  ********  *.*  **  

14. spacer 4.38|1995017|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to MN010756 (Mycobacterium phage Phreeze, complete genome) position: , mismatch: 8, identity: 0.771

ttggcccgtcatgacgccgacgacctgatcgagat--	CRISPR spacer
atggcccgtcatgacgaggacgacct--ttgctattg	Protospacer
 ***************  ********  *.*  **  

15. spacer 4.38|1995017|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to MH509445 (Mycobacterium phage Cborch11, complete genome) position: , mismatch: 8, identity: 0.771

ttggcccgtcatgacgccgacgacctgatcgagat--	CRISPR spacer
atggcccgtcatgacgaggacgacct--ttgctattg	Protospacer
 ***************  ********  *.*  **  

16. spacer 4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 8, identity: 0.758

taatcaaggcggagccgcccggccccgcgccaa	CRISPR spacer
gcagataggcggagccgccgcgccccgcgccat	Protospacer
  *   *************  *********** 

17. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 8, identity: 0.765

gaccagc-gcaggacgggcgagccggtgccgacag	CRISPR spacer
-acgaacagcagcaccggcgagccggtgccgatca	Protospacer
 ** *.* **** ** ****************. .

18. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 8, identity: 0.765

gaccagc-gcaggacgggcgagccggtgccgacag	CRISPR spacer
-acgaacagcagcaccggcgagccggtgccgatca	Protospacer
 ** *.* **** ** ****************. .

19. spacer 4.21|1993803|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 9, identity: 0.735

tggacagccaagtccggaaaacaggccaccaaac	CRISPR spacer
gggatagccaagcccggaaaacaggcgtgcgtcc	Protospacer
 ***.*******.*************   *.  *

20. spacer 4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.743

gagctgggcaccgacctgatcgaccccgtcccgat	CRISPR spacer
atgctcggcaccgacctgatcgacgccgacaccgc	Protospacer
. *** ****************** *** * * ..

21. spacer 4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.743

gagctgggcaccgacctgatcgaccccgtcccgat	CRISPR spacer
atgctcggcaccgacctgatcgacgccgacaccgc	Protospacer
. *** ****************** *** * * ..

22. spacer 4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.743

gagctgggcaccgacctgatcgaccccgtc--ccgat	CRISPR spacer
ggcgcgggcaccgtgctgatcgaccccgtcaacca--	Protospacer
*.  .********  ***************  **.  

23. spacer 4.25|1994086|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.743

gagctgggcaccgacctgatcgaccccgtcccgat	CRISPR spacer
ttcgtcgactccgacctgatcgaccccgaccccat	Protospacer
    * *.* ****************** *** **

24. spacer 4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 9, identity: 0.727

taatcaaggcggagccgcccggccccgcgccaa	CRISPR spacer
ctcccggggcgggaccgcccggccccgcgccac	Protospacer
.  .*..*****..****************** 

25. spacer 4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015746 (Shinella sp. HZN7 plasmid pShin-10, complete sequence) position: , mismatch: 9, identity: 0.727

taatcaaggcggagccgcccggccccgcgccaa	CRISPR spacer
tcgacaaggcggggccgcccggccgcgcttgac	Protospacer
* . ********.*********** *** . * 

26. spacer 4.35|1994801|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019064 (Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

gcagccatcaaccgcgcagccctggctgccgagaa	CRISPR spacer
cacgataccgaccgcgcagccctggtggccgagaa	Protospacer
   * .*.*.***************. ********

27. spacer 4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 9, identity: 0.727

taatcaaggcggagccgcccggccccgcgccaa	CRISPR spacer
ctcccggggcgggaccgcccggccccgcgccac	Protospacer
.  .*..*****..****************** 

28. spacer 4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015746 (Shinella sp. HZN7 plasmid pShin-10, complete sequence) position: , mismatch: 9, identity: 0.727

taatcaaggcggagccgcccggccccgcgccaa	CRISPR spacer
tcgacaaggcggggccgcccggccgcgcttgac	Protospacer
* . ********.*********** *** . * 

29. spacer 4.42|1995299|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019064 (Rahnella sp. ERMR1:05 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

gcagccatcaaccgcgcagccctggctgccgagaa	CRISPR spacer
cacgataccgaccgcgcagccctggtggccgagaa	Protospacer
   * .*.*.***************. ********

30. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 9, identity: 0.743

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
gtcggggagaatggcgcgggcaagtcgacgctcat	Protospacer
******* ******* *********** .* . ..

31. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.743

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
gtcggggagaatggcgcgggcaagtcgacgctcat	Protospacer
******* ******* *********** .* . ..

32. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 9, identity: 0.743

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
gtcggggagaatggcgcgggcaagtcgacgctcat	Protospacer
******* ******* *********** .* . ..

33. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to LR606149 (Rhizobium sp. Q54 genome assembly, plasmid: 6) position: , mismatch: 9, identity: 0.743

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcggagcgaatggctctggcaagtcgacgctgct	Protospacer
.****.*********** ********* .* .* .

34. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010728 (Phaeobacter inhibens strain P88 plasmid pP88_c, complete sequence) position: , mismatch: 9, identity: 0.743

gtcggggcgaatggctcgggcaagtcgctgacggc-----	CRISPR spacer
gtcggggccaatggcgcgggcaagtc-----caccttttt	Protospacer
******** ****** **********     *. *     

35. spacer 4.72|1997463|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.743

gtccgcgtggacgacctgtccgtcactaccagctc	CRISPR spacer
atccgcgtggccgacctgtccggcaccggcgtctt	Protospacer
.********* *********** ***.. *. **.

36. spacer 4.74|1997607|36|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 9, identity: 0.75

tcgtcat-ccgcgccatcgccgagcacctcgtagtcg	CRISPR spacer
-cgccgcgccgcgccatcgctgagcatctcgtaggtc	Protospacer
 **.*.. ************.*****.******* . 

37. spacer 5.5|1999276|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.757

gacgtggcccgcgccgccgtgctgcgctggatcaccc	CRISPR spacer
agcgacgccttcgccgccgtgctgcgctggatggccg	Protospacer
..**  ***. ********************* .** 

38. spacer 5.5|1999276|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to CP017041 (Propionibacterium sp. oral taxon 193 strain F0672 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

gacgtggcccgcgccgccgtgctgcgctggatcaccc--	CRISPR spacer
cacctggcccgcgccgcggtgctgcgc--ggccagcgcg	Protospacer
 ** ************* *********  *..** *   

39. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to MN729597 (Pseudomonas phage CHF19, complete genome) position: , mismatch: 9, identity: 0.735

gaccagcgcaggacgggcgagccggtgccgacag	CRISPR spacer
gatcttcgcaggaaggacgagccggtgccgctga	Protospacer
**.*  ******* **.************* ...

40. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to MN729598 (Pseudomonas phage CHF21, complete genome) position: , mismatch: 9, identity: 0.735

gaccagcgcaggacgggcgagccggtgccgacag	CRISPR spacer
gatcttcgcaggaaggacgagccggtgccgctga	Protospacer
**.*  ******* **.************* ...

41. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to MN729595 (Pseudomonas phage CHF1, complete genome) position: , mismatch: 9, identity: 0.735

gaccagcgcaggacgggcgagccggtgccgacag	CRISPR spacer
gatcttcgcaggaaggacgagccggtgccgctga	Protospacer
**.*  ******* **.************* ...

42. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to KJ507099 (Pseudomonas phage phiPSA2, complete genome) position: , mismatch: 9, identity: 0.735

gaccagcgcaggacgggcgagccggtgccgacag	CRISPR spacer
gatcttcgcaggaaggacgagccggtgccgctga	Protospacer
**.*  ******* **.************* ...

43. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to MN729596 (Pseudomonas phage CHF7, complete genome) position: , mismatch: 9, identity: 0.735

gaccagcgcaggacgggcgagccggtgccgacag	CRISPR spacer
gatcttcgcaggaaggacgagccggtgccgctga	Protospacer
**.*  ******* **.************* ...

44. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to MN729600 (Pseudomonas phage CHF17, complete genome) position: , mismatch: 9, identity: 0.735

gaccagcgcaggacgggcgagccggtgccgacag	CRISPR spacer
gatcttcgcaggaaggacgagccggtgccgctga	Protospacer
**.*  ******* **.************* ...

45. spacer 5.16|2000069|34|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to MN729599 (Pseudomonas phage CHF33, complete genome) position: , mismatch: 9, identity: 0.735

gaccagcgcaggacgggcgagccggtgccgacag	CRISPR spacer
gatcttcgcaggaaggacgagccggtgccgctga	Protospacer
**.*  ******* **.************* ...

46. spacer 5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.757

-gcgtcgagctgctcggtgcgggcgatgacggtggccc	CRISPR spacer
agcacc-cgctgctcggcgcgcgcgatgacggtggtgg	Protospacer
 **..*  *********.*** *************.  

47. spacer 5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to MN586047 (Gordonia phage EMoore, complete genome) position: , mismatch: 9, identity: 0.757

gcgtcgagctgctcggtgcgggcgatgacggtggccc	CRISPR spacer
gcgacgagctgctcggtgcgggggatggggaagccgg	Protospacer
*** ****************** ****. *. * *  

48. spacer 5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

gcgtcgagctgctcggtgcgggcgatgacggtggccc	CRISPR spacer
aggtcgaactgctcggtgcgggcggtgaggtcgtcgc	Protospacer
. *****.****************.*** * .* * *

49. spacer 4.22|1993873|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051543 (Paracoccus sanguinis strain OM2164 plasmid pPspOM122, complete sequence) position: , mismatch: 10, identity: 0.714

tcgtcgctaccaaggccccgggcgccaccacagca	CRISPR spacer
tccccgccgccaaggccccgggcgccaccggcctg	Protospacer
** .***..********************.   ..

50. spacer 4.26|1994157|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU130294 (Pseudomonas putida strain 12969 plasmid p12969-DIM, complete sequence) position: , mismatch: 10, identity: 0.706

cgcatcatccactctggcgcagaccggcacatac	CRISPR spacer
cgcatcatccaacctggcgcagacggaattgtcg	Protospacer
*********** .*********** *.  ..*  

51. spacer 4.26|1994157|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027170 (Pseudomonas aeruginosa strain AR_0356 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

cgcatcatccactctggcgcagaccggcacatac	CRISPR spacer
cgcatcatccaacctggcgcagacggaatggtcg	Protospacer
*********** .*********** *.   .*  

52. spacer 4.26|1994157|34|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029094 (Pseudomonas aeruginosa strain AR441 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

cgcatcatccactctggcgcagaccggcacatac	CRISPR spacer
cgcatcatccaacctggcgcagacggaatggtcg	Protospacer
*********** .*********** *.   .*  

53. spacer 4.34|1994732|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 10, identity: 0.697

taatcaaggcggagccgcccggccccgcgccaa	CRISPR spacer
gcgcggtggcggagccggccggccccgccccca	Protospacer
  .. . ********** ********** ** *

54. spacer 4.41|1995230|33|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 10, identity: 0.697

taatcaaggcggagccgcccggccccgcgccaa	CRISPR spacer
gcgcggtggcggagccggccggccccgccccca	Protospacer
  .. . ********** ********** ** *

55. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ttcggggagaatggcgcgggcaagtcgaccttgat	Protospacer
 ****** ******* *********** .  .*..

56. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ttcggggagaatggcgcgggcaagtcgaccttgat	Protospacer
 ****** ******* *********** .  .*..

57. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ttcggggagaatggcgcgggcaagtcgaccttgat	Protospacer
 ****** ******* *********** .  .*..

58. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcgggccgaatggcgcgggcaagtcgacactgat	Protospacer
.***** ******** *********** .. .*..

59. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ttcggggagaatggcgcgggcaagtcgaccttgat	Protospacer
 ****** ******* *********** .  .*..

60. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ttcggggagaatggcgcgggcaagtcgaccttgat	Protospacer
 ****** ******* *********** .  .*..

61. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcgggcccaatggctcgggcaagtccacgctgct	Protospacer
.***** * *****************  .* .* .

62. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NC_014035 (Rhodobacter capsulatus SB 1003 plasmid pRCB133, complete sequence) position: , mismatch: 10, identity: 0.714

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcgggccgaacggctcgggcaagtcctcgctgct	Protospacer
.***** ****.************** ..* .* .

63. spacer 5.5|1999276|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027024 (Streptomyces sp. WAC00288 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.73

gacgtggcccgcgccgccgtgctgcgctggatcaccc	CRISPR spacer
cgcctgggccgcgccgccgtcctgcgctgggcccgcg	Protospacer
 .* *** ************ *********..*  * 

64. spacer 5.13|1999856|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

ggatgggtcgccagcgtccgcgccaccctccccag	CRISPR spacer
gccaaggtcgccagcgtcagcgccaccatccaggc	Protospacer
*   .************* ******** ***  . 

65. spacer 5.13|1999856|35|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009439 (Streptomyces glaucescens strain GLA.O plasmid pSglau1, complete sequence) position: , mismatch: 10, identity: 0.714

ggatgggtcgccagcgtccgcgccaccctccccag	CRISPR spacer
gacgtcgccgcccgcgtccgcgccaccttccccgt	Protospacer
*.    *.**** **************.*****. 

66. spacer 5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.73

gcgtcgagctgctcggtgcgggcgatgacggtggccc	CRISPR spacer
ggcgggggctgctcggtgcggaggatgacggtgccgt	Protospacer
*    *.**************. ********** * .

67. spacer 5.17|2000139|37|NZ_CP015970|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.73

gcgtcgagctgctcggtgcgggcgatgacggtggccc	CRISPR spacer
ggcgggggctgctcggtgcggaggatgacggtgccgt	Protospacer
*    *.**************. ********** * .

68. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

69. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

70. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

71. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcggcgccaatggctcgggcaagtcgactttctt	Protospacer
.**** ** ****************** .  .  .

72. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcgggccgaacggctcgggcaagtcgaccttctt	Protospacer
.***** ****.*************** .  .  .

73. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

74. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcgggccgaacggctcgggcaagtcgaccttctt	Protospacer
.***** ****.*************** .  .  .

75. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

76. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcgggccgaacggctcgggcaagtcgaccttctt	Protospacer
.***** ****.*************** .  .  .

77. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

78. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcgggccgaacggctcgggcaagtcgaccttctt	Protospacer
.***** ****.*************** .  .  .

79. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

80. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

81. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
ctcggggagaatggcgcgggcaagtccacgctcct	Protospacer
 ****** ******* **********  .* .  .

82. spacer 4.49|1995800|35|NZ_CP015970|CRISPRCasFinder,CRT,PILER-CR matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.686

gtcggggcgaatggctcgggcaagtcgctgacggc	CRISPR spacer
atcggggccaatggcgcgggcaagtcatctatcct	Protospacer
.******* ****** **********... *.  .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	2628336 : 2637232	9	Brucella_phage(33.33%)	NA	NA
DBSCAN-SWA_2	3473467 : 3489062	27	Streptococcus_phage(15.38%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP015970|2628336:2637232|DBSCAN-SWA
ATCAGGCCTCCAGGGAGGCCATCGCGGCGCTCACCGATTCGGCGGTGGGGGAGGCGATGTCGTCGACGATGTGCCCGTCCAGCAGCATGAGCACCCGGTCGGCGTAGGAGGCGGCGCGGGCGTCGTGGGTGACCATGATGATGGTCTGGCCCAGGTCGGTGGCGCAGTGGCGCAGGTAGTCCAGCAGCGCGGTACCGGATTTGGAGTCCAGGGCGCCGGTGGGTTCGTCGGCGAAGACGACCGAGGGTCTGGTGATCATGGCGCGGGCGCAGGCGACGCGCTGCTGCTGGCCGCCCGACAGTTCGGACGGGCGATGGGTGAGCCGGTCGGCGATCCCCAGTCCGTCGACCAGCGTCGTGAACAGTTCAGCGTCGGGCTTGACGCCGGCCAGGTCCAGGGGCAGCAGGATGTTCTGCTTCGCGGTGAGGGTGGGCAGCAGGTTGAAGGACTGGAAGATGAACCCCACCTGGTCGCGGCGCGCCCGGGTGAGCTGCTTGTCGGGCAGGGAGGACAGCTCGGTGCCGGCCAGGAAGACCGAGCCGGAGGTGATCCGGTCCAGCCCGGCCAGGCAGTGCATGAGGGTGGACTTCCCCGATCCCGAGGGGCCCATGATCGCCGAGAAGGAGCCGCGTCCGAATCCGACAGAGACGCCATCCAGCGCGGTGACCTGGGTGTCGCCGGTGCCGTAGACCTTGGTGAGCCCGACCCCGGCCGAGGCGGCCTGTGCGGGATCGGGGGACGCGGCGACCGCGGGCTGCTGTGCTGTCGGTTCGGGAGCGTGTGCGGATCCGGGGCGGGGGACCGGGCTGGAATGGTGCGCATCGTCGGAGGATGCGGGGGAGCCGGGGGTGTCCGCGAGTCCGCGTCGAGGCGCCGGGACGCCGCCCTGAGGCTCGGGCCCGGGGTCGGAAACCGGCGGTTCGAACGGGCTGGAGCGACGCGGTGTGGACATCTCTGCCTTTCGACGGACGACGTGCGGCCTGTCTCCCACCCTAGAGTGCGATGTCCGGATCAGTGCAGGCACCACGCCCGCCCGGAGAGTGTGTCGGATCCGGGGGCGTCTGTTCCCCACTTTCCGACAACACTGAACGAGTTACTGAACGAGTTCGTCAGGATCAGGAGACGAGGCCCACCTCGTGGGCGAAGAGCACCAGCCCGACCCGGTCGCGGCACTCCAGCTTGGACAGCAGCCGGCCGATGTGTGTCTTGACGGTGCCCTCGGCCATGTAGAGGTTCGCGGCGATCTCGGAGTTCGTGGCTCCCTTGGCGATCTCCACCAGCACCTCGCGCTCCCGGTCGGTCAGCACCGAGAGGCGCTCGTCGGACTCGCGAGGGTTGTTGGGCAGGGTGGGGACGACGTGTTCGAGGAGCCGCTTGGTGGCCGAGGGTGCGACGACGGCCTCCCCCTCCGCGACGTTGCGGATGGCGGAGAGGAGTTCGGCGGGGCGGGCGTCCTTGAGGAGGAAGCCGGAGGCGCCGGCCTTGAGCCCCGCGTATACGTACTCGTCGAGGTCGAAGGTGGTGAGGATCATCACCTTGGTGTCCAGGGGGGAGGCGGCGATGCGGCGGGTGGCCTCCACGCCGTCCATGACCGGCATCCGGATGTCCATGAGAGCGACGTCGACCGGGATGCGGCGCAGCACGTCAAGGGCCTCGGCGCCGTTGGAGGCCTCACCGACCACCTCCATGCCGTCCTCGGCCTCGATGAGCATGCGGAAGCCCGAGCGGACCAGGGACTGGTCGTCGACCAGCAGGACGCGGATCGGTTCTGGCATGACACCTCCGGGAATCGGCAACACCACATGGTAGTGGACCCGGCGTCCGGGAGGGTGACGAGAGTGGTGGCGGATGCATCTGCAGAGCAGAGTATATCTCTTATATCTGATATGTCGTGTGTCGTATATTATGAGTGTGAGATGGGTCGTGGAGTTCTCTGAGGAGGTGCGCACCTGGTACGTGCAGCTCACTCCTGCCGGGAAGGCAGCCACGGACCGGATTCTTGAACGTCTGGCAGCTCAGGGCAACATGCTTCGGATGCCGCACTCAAGATCGCTCGGTGAGGGGCTGTACGAGTTGCGCTTCTCGTGCGAGGGCGTCAATCGACGTATCACCTACGTGTACGACCCTGATCGGAAGGCTGTGACATTGACCACCTTCCGCAAGCAACGCCAGAACGAACGTGCCGAGATTCTCCGGGCACGTCGGACCCAGGCCGCACACCTTGCGGCTCGTCGAACTCAGAGGAGAGGCAAGAGGCAATGAGCACCACCCCGTGGGAGCAGGTCAGGGATGAGTCTCTGGCCGCCATGACCGACGAAGAGCGGGACGATTACGACGCAGCGGCGGTCGAGGCCGAGGCCCGGCTCCAGCTGGCAGAGCTCGTCTACAACGCTCGCACCGCAGCAGGTCTGTCCCAGACAGAGCTCGCGCGCCGTGCCAACACCCGGCAAAGCGTGATTTCCGCGATCGAGAATGGGGCCCAGGCACCCGGCGGAGTGATGCTCGCCCGCATCGCCCATGCTCTCGGAGGCACCCTCGAGATTCAGGTCGCCGCCTGACTTCACAGACCTCCATGGGGCGGATCCCAGCGTCGGCGGCACGCGTGTACGCGCATGAACGACAAGGTTGGGCGCGTGTGGCGGCATCTCAGGCGGCCGGTACCCGGTGCACCTCCAGGCGGAGGTCGAGTGCCGTGAGGACCTTGACGATGGTCGTCCAGGTGGGATTGCCGGTCTCCGACAGGGCGCGGTACAGGCCGTCGCGGCTCATTCCGGCGCGTCGGGCGAGTTCACTCATATTGCCAGAACGGGCGATGATGCCCAGGGCGATGGGAAGGGCCGAAGGATCCGAGGAGGAGTCTTCCAGTGCCGTCTGGAGCAGCAGCGCAGCGTCGTCGTCGGTCGTGATGTAATCCGCTGCGTCGAACAGGTCGTATGTCTCGTTGCTCATGATGTCCCGTCCTGATGATCGTGTCGCCAGCGGGTGGCGAGGGTCCGCGCTCTTGCGATGTCCTTGTTCTGTGTCGACTTGTCGCCTCCGCACAGCAGAAGGATGAGGGTATTGGCCTCTCGGAGGTAGTAGATGCGGTAGCCGGGGCCGGTATGGATCCTCAGTTCGAACAGCCCCGCTCCCACCGGCTTGGTATCGCCTGGGTAGCCCTGGGCAAGTCGTTCGAGCCGCATGAGGATCCGACTTCTACCGCGGCCGTCGCATCCCTCTGCACCATGTGGAAACCCTCTCACGCTGGATCCGGGCCGGAGCCTGACCGCGGGAGGGATCCGGGCAGACCGATTTCCCGACAGATCGGGGTTCTCAGCCGAAATGGGCCGGATGGTCCGAACTGCCGGGGAATCGGTCGCGTCGCCGCGCCCCCGCGCCGTCAGCCCTTGACGCACAGCAGCGTCTGGAGGCGGGCCACGACGCTGACGAGGTCGGTCTGGGCGGCGATCACGTCGTCGATGTCCTTGTAGGCGGCGGGGATCTCGTCGATGACGCCGGTGTCCTTACGGCATTCGATGCCGGCGGTCTGGACGGCCAGGTCGGCGGCGGTGAAGGTCCGCTTTGCCGCGCGCCGCGACATCCGGCGTCCGGCCCCGTGGGAGGCGGACTGGTAGGAGGTCTCGTTGCCCAGGCCGGTCACGATGTAGGAACCGGTGCCCATGGATCCGGGGATGACGCCCATGTCTCCTGCGCCGGCGCGGATGGCGCCCTTGCGGGTGACGATGAGCTCCTCCCCGTCGTGGGTCTCCACGGCGACGTAGTTGTGGTGGCAGCGGATGGGGTCCTCGAAGGCGATGCCGTCGATGGCCCGGGACAGTTCGTCGCAGATGGCGGCGAGCATGACGTCGCGGTTGAGCAGGGCGTAGGACTGCGCCCACCACAGGTCGTGGAGGTAGTGCTCCATCTGCGGCGAGCCCGCGATGAACACGGCCAGGTCGCGGTCGGCCAGGTTCTGGTTGTGGGCCAGTCCCTGGGCGATGCCCATGTGGACCTGGGCGAGCTGGTTGCCGGTTCCCCTGGATCCGGAGTGCAGCGTCACCCACACCCGGCCGTCGTCGCCGGAGCACAGCTCGATGAAGTGGTTTCCCCCGCCCAGGGTGCCCACCTGCCCGCCGGCCTTCGCCTCGGCCCGTCCGGTGCGCGCGGACGCAGTGAGATCCCGGGCGTACAACTGCTGGAACTCGCCCATCACCGTCTGGTACCGGGCCTTGAGATCGGGGTGCCGCGCGATGGTCCGGGCCTCGCCGTTGTGCATGGAGAATCCCACCGGCACAGCCCGCTCGATCTGGTGCCGCAGCCCCGCGAGGTCCTCGGGCAGCTGGTCGGGGCGCAGGTTGGTGCGCACCGCCGTCATGCCGCAGCCGATGTCGACGCCCACGGCGGCCGGGGCGACGGCCTGGCTCATCGCGATGACCGATCCGACGGTGGCGCCCAGGCCGTAGTGGACGTCGGGCATCACCCGGACGCCGCGGGTCCAGGGCAGCGCCGCCACATTGCGCAGCTGAGCTCGAGCGGCCTCCTCGATACCGGCCTCCTCGGCCCACATCAAGGTGTTGTCGGTGCCGGACAACGGCACCGGAAAAATGGACATGATGCATCTCCTGTCAGGTGTTTTCGGGCGCACTGATTCCATTTCCGGCGGAATTGTTGACACGGATGTCCGCGAGTTGCTCCTGGCCGCTGATGACGGCTTGGAACATTGGATGGAAGTGGGGTGCGATCCCTGGGGGTGGCCCCGGGTGAGACGTCGTCAGGCCGCTACGGGCCCGTCATTGCTCAGTTTCGGGGTTTCGGCAGTCGCTCGTCCAGCGACCGCCCTCGCCCGTTGAGGGCGTCGAGCTTGAGGGTGCCACGGCGCGGCAGGACGGTCGCGTATGTGCGACTTCTCTGCTGTGTGGCCATGGCCGGTGTCCTCTCTCGATTGCGTCGTCCGCGACGCGAGAAGAAAGTCTGCCACACCGATTTCAGGAATGCAATACGAGGCTGCAATTCTGCCCCGCAATCAGGTGTTCCGGGTCTCCCGGGCCTCAGAGGCCTTCGCCGAGCGGTTGTCGGGGTTCGTGAGCGGTGGGGAATGGGCTGGCGTAGCGTGACGCTGCACTCAGGAGAACCTCACAGCATGACAGGGAAGTGACGAGGCGTGAGCAGGACCGTGGCCGTCGAGGAGCCGAGCGCCGACGTACCTCCTTTCAAGCGGCGTCGTCTCCTCCTCGTCCTCCTCGCCCCGCTGTTCATGGCCCTGGTCGCCGTCTCGGTGATCAACGTCGCCCTCGCCCCGATCGGCAACGACCTTCACGCGACGTCGTCCGGCCTGCAATGGGTGCTGTCGGGCTACGCGCTGGCCTTCGGCGTCCTGCTGGTGCCCGCCGGGCGGATCGGCGACGCCACCGGCCGCAAACGGATGCTGCTCATCGGCCTGGCCTTCTTCACCCTCGGCTCGATCATCAGCGCCCTGTCCCCGACGATCCAGGTACTCAACCTGTCGCGGATCGTCCAGGGGATCGGCTCCGGCCTGCTCAACCCGCAGGTCGTCGGCATCATCCAGCAGCACTTCCGCGGCCAGGACCGCGCCCGCGCCTTCGCCATGTTCGGGACGACGGTGGCTCTGGCGACCGCCATCGGGCCGGTGATCGGCGGGCTGCTCATCGCACTGCTCGGGCCCGACGCCGGCTGGCGCTGGATGTTCGGGATGAACGTCCCCATCGGCGTCCTGGCCATCTGGGCCGGTTCCTACTGGGTGCCGGGCGACTACCGCCCGAAAGGATCCCGCCTCGACCTCGACCCGGTCGGCATCGTGCTGCTCGCCCTGGCCCTGCTCTGCGTCATGTTCCCCTTCCTGGAGCGCGGCCTGGGGACGGGCGCCTGGATCACCCTGCCGATCGGCCTGGCGCTGAGCCTCGTGTGGATCCGATGGGAGTCCCGCTACCGGCGTCTCGGCAGGGAGCCCATGGTCGATCTCGACATCTTCGCCAACCGCGCCTTCAGCAACGGCATCCTCATCGTCTCGGTGTACTTCCTCGGCTCCACCTCGATCTGGATCGTGATACCGCTCTTCGTCCAGAACCACCTCGGCCACCAGGCCCTGTTCGCCGCTCTGCTGGGGCTGCCGTCGTCGATCTTCGCGGGCATCGGCTCCCAGATCTCCGGCCGGTACGTCCTGGACGCCGGCCGCCGGATGGTCATTGCCGGCCTGTCGGTCGCCGGCCTGGGCGTCATCCTGATACTCGGCACCGGCATGGGCGTGGAGTGGCTCGGCTGGCCGGCCTGGACGCTGGTCTTCCCGCTGGCGGTGATCGGAATCAGCCAGGGCTTCACCGTCTCCCCGAACCAGACCCTGACCCTGGCGGCTGTCGACCCCCGCTACGGCGGGGTCGCCGGAGGCATCCTGCAGACTGGCCAGCGGATCGGCCAGGCGGTCGGCACGGCGATCATCCCCGGCATCCTGTTCACCCTCACCGAGCAGACCGACTCCTGGATCACGGCCTTCATCGCCGCGCTGACAGTCATCGCCGTCTTCGTCGCCCTGGCGATCGCGGTGTCGGTGGTGGATCGACGCCGTGAGAAGGCTGCGATCACGGCCTGACAAGGGAACTCATGGCTGTCTACGGGGCAGGGCGGGCCCCTGTGCTTCCTGTCATAGAATCCACAGATCTGAGATTCTTTTAGGTTTTTTGAAACGGTGTTCTGTGGGTGGCCGGAAATGGTCCGATCTGACTTGTTCTCGGCGAGCGGAAGGTTCAGAGTAATTGATGTCCGGTTCGAAACCCCGATCCGGAGAACATCAATGAAAGGTCATGATTATGGCTAAGCGTCCCGCTCCGAAGCTCCCCGTTCCCAAGCCCCGCAAGAAGGTGCGCAAGCCCGCTCCGAAGAAGGTTGTGCGCAAGCCGGCCCCGAAGAAGTCCGCTCGTCGCCACTGACGCGATTCAGAGTCGCCGCTGACGCGGTGACGCCGGATCACCGAAGGGACGAGGCCCTCATGTCGCGGTGCGGCATGCCGTGATCCGGCGGCTGAAGGTGCGGGGCGCTGTTCATCCAGGCGCCCCGCACCAGTCCGCGCCCATGAACCACAGTCCTTCCAGAATCAGGGGCCCATGTCGACCAGCACGTCCATCAGATCATCCGTCGCCATGATGGCGCCCTACACGAAGGGTCACCGCTTCGCGATTGTTTCAGGGATCATTCTTGGAATCATCGCAGTATTCGGACAGGCGGCTGCACTGAATGTCTTCGGCAAATTCATCGACGACGTCATCGTTCCCGCCGACTTCTCAGCATTTCCTCATGTCGCGATCCTCTACGCTGTCATCTCGGTGGCGATGATCGCCGGCGGCTGCGTCTCCCAGGTGGCCCTGGCCTCCGGAGGGGAGGGAGTCGTCCGCTCCCTGCGCTCCGAGCTGTTCCGCCGCATCATGTCGATGCCGGCGTCCTTCTTCGACCGCAATGAACCCGGCGACCTGCTCACCCGCATCGACTCAGACGTCGACGAGGTGGAGGTCTTCGCCGTCTCAGGCATCGACACGGCCGCCAACGCCGTCTTCCAGGTCGTCGTCTTCACCGGCATGCTCGTATGGCTCGACCCCGAACTCACCCTCGTGGCCCTGGTCATCGTCCCCGTCGTCCTGATCGCCACCAAGTTGCTCGGACGTCGGATGGCCGCCGTGGAGGCCGAGGCCCGGCGCCGCGCCTCCAACCTCATGGGAGTGGCCGAGCAGTCGGTCAACGGGGAGGCCGACGCCCGGGCCTTCGGATGGGTCGGGGCGCTGACCCGGCGTTTCGACGAGGAAGGACGCCATGCCCAGGCCGCCGCTGTCAAGGAGACCCGGGTGGGTCAGGTCCTCGAGGCCGTCGGCAGCCTCGCCGTCGTCGTTGCGGCCCTGGCCGTCATCGGCTTCGGCGTCTACCAGTTGTCGAGCAGAACCATCACGATCGGCACCCTCACCATCTTCCTGGGTTTCCTCATGGAGCTCTACGAGCCCATCACCGACCTGGGCTCTCTCGGGGCCTCCGGAGCTGCAGCAGCGGTGAGCGCCGGGCGGATCAACGAGATCTTCACCGCCGAGAACACCACTCCCGAACCGGCGGCCCCCGGCCCCGCCCCCGCCACGCCGACCGATCTGCGCTTCGACGCCGTCACCTTCTCCTACCCCGGCCGGGCGAGGGTGCTCGATGCGGTGAGCTTCGCAGTGCGCCCCGGCGAGGTGGTCGCCCTGGTCGGCGATTCCGGCGCCGGCAAGTCGACCATCGCCAGGCTCGCCCATCGCGCCTACGATCCGTCGGGCGGGCGGGTGCTGCTCGGCGGGCGGGATCTGCGGACCCTCGGCTCATCGACCGTCACCGGCAACGTCGCGGTGGTCAATCAGTTCCCCGCGCTGCTCGACACGACCATCATCGAGAACGTGCGCGCGGCCCGGCCCCGGGCGGGCCGCGATGAGGTGGATTCGGCGATTCGCGCCGTAGGACTGGACGACGTTGCGGCAGCTTTCCCGGAGGGTCTGGAGACCCAGGTCGGGCCGCACGGCCGTGGGCTGTCGGGCGGGCAGCGCGAACGCGTCGCGATCGCCCGCGCTCTGCTGTGCCGGGCGCCGGTGCTCATCCTCGATGAGCCCACCAATGGGCTGGATCAGGCCTCGGTGACCGACTTCACCGCCATGATCGCCGCCCTCCCCGGCGATCGGGCCATCCTCCTCATCACCCACGACCAGGCCGTCGCCCGATGCGCCGACCGTCTCCTCGTGCTGTCCCATGGAAGGGTGGCCGCCCAGCCCACCCCCACGCCGCTCGCGCCGCGACGGGCCATGACGCCGGCCCGGCTCCCGCGCCGCGCCCTGGCCCCGGTCGCCTCACAGGCGGGGAACAGCAGCACCCCAGTATCGCCACCGGATCGTTGGCTGTGA

Protein sequences of DBSCAN-SWA_1

>NZ_CP015970|2628336:2637232|2630981_2631284_-|WP_015068916.1|DBSCAN-SWA
MSNETYDLFDAADYITTDDDAALLLQTALEDSSSDPSALPIALGIIARSGNMSELARRAGMSRDGLYRALSETGNPTWTTIVKVLTALDLRLEVHRVPAA
>NZ_CP015970|2628336:2637232|2631280_2631517_-|WP_082815999.1|DBSCAN-SWA
MRLERLAQGYPGDTKPVGAGLFELRIHTGPGYRIYYLREANTLILLLCGGDKSTQNKDIARARTLATRWRHDHQDGTS
>NZ_CP015970|2628336:2637232|2633475_2634918_+|WP_062819836.1|DBSCAN-SWA
MSRTVAVEEPSADVPPFKRRRLLLVLLAPLFMALVAVSVINVALAPIGNDLHATSSGLQWVLSGYALAFGVLLVPAGRIGDATGRKRMLLIGLAFFTLGSIISALSPTIQVLNLSRIVQGIGSGLLNPQVVGIIQQHFRGQDRARAFAMFGTTVALATAIGPVIGGLLIALLGPDAGWRWMFGMNVPIGVLAIWAGSYWVPGDYRPKGSRLDLDPVGIVLLALALLCVMFPFLERGLGTGAWITLPIGLALSLVWIRWESRYRRLGREPMVDLDIFANRAFSNGILIVSVYFLGSTSIWIVIPLFVQNHLGHQALFAALLGLPSSIFAGIGSQISGRYVLDAGRRMVIAGLSVAGLGVILILGTGMGVEWLGWPAWTLVFPLAVIGISQGFTVSPNQTLTLAAVDPRYGGVAGGILQTGQRIGQAVGTAIIPGILFTLTEQTDSWITAFIAALTVIAVFVALAIAVSVVDRRREKAAITA
>NZ_CP015970|2628336:2637232|2635429_2637232_+|WP_062819837.1|DBSCAN-SWA
MSTSTSIRSSVAMMAPYTKGHRFAIVSGIILGIIAVFGQAAALNVFGKFIDDVIVPADFSAFPHVAILYAVISVAMIAGGCVSQVALASGGEGVVRSLRSELFRRIMSMPASFFDRNEPGDLLTRIDSDVDEVEVFAVSGIDTAANAVFQVVVFTGMLVWLDPELTLVALVIVPVVLIATKLLGRRMAAVEAEARRRASNLMGVAEQSVNGEADARAFGWVGALTRRFDEEGRHAQAAAVKETRVGQVLEAVGSLAVVVAALAVIGFGVYQLSSRTITIGTLTIFLGFLMELYEPITDLGSLGASGAAAAVSAGRINEIFTAENTTPEPAAPGPAPATPTDLRFDAVTFSYPGRARVLDAVSFAVRPGEVVALVGDSGAGKSTIARLAHRAYDPSGGRVLLGGRDLRTLGSSTVTGNVAVVNQFPALLDTTIIENVRAARPRAGRDEVDSAIRAVGLDDVAAAFPEGLETQVGPHGRGLSGGQRERVAIARALLCRAPVLILDEPTNGLDQASVTDFTAMIAALPGDRAILLITHDQAVARCADRLLVLSHGRVAAQPTPTPLAPRRAMTPARLPRRALAPVASQAGNSSTPVSPPDRWL
>NZ_CP015970|2628336:2637232|2631714_2632926_-|WP_062819835.1|DBSCAN-SWA
MSIFPVPLSGTDNTLMWAEEAGIEEAARAQLRNVAALPWTRGVRVMPDVHYGLGATVGSVIAMSQAVAPAAVGVDIGCGMTAVRTNLRPDQLPEDLAGLRHQIERAVPVGFSMHNGEARTIARHPDLKARYQTVMGEFQQLYARDLTASARTGRAEAKAGGQVGTLGGGNHFIELCSGDDGRVWVTLHSGSRGTGNQLAQVHMGIAQGLAHNQNLADRDLAVFIAGSPQMEHYLHDLWWAQSYALLNRDVMLAAICDELSRAIDGIAFEDPIRCHHNYVAVETHDGEELIVTRKGAIRAGAGDMGVIPGSMGTGSYIVTGLGNETSYQSASHGAGRRMSRRAAKRTFTAADLAVQTAGIECRKDTGVIDEIPAAYKDIDDVIAAQTDLVSVVARLQTLLCVKG
>NZ_CP015970|2628336:2637232|2628336_2628993_-|WP_062820783.1|DBSCAN-SWA
MDGVSVGFGRGSFSAIMGPSGSGKSTLMHCLAGLDRITSGSVFLAGTELSSLPDKQLTRARRDQVGFIFQSFNLLPTLTAKQNILLPLDLAGVKPDAELFTTLVDGLGIADRLTHRPSELSGGQQQRVACARAMITRPSVVFADEPTGALDSKSGTALLDYLRHCATDLGQTIIMVTHDARAASYADRVLMLLDGHIVDDIASPTAESVSAAMASLEA
>NZ_CP015970|2628336:2637232|2630246_2630597_+|WP_099093034.1|DBSCAN-SWA
MRWVVEFSEEVRTWYVQLTPAGKAATDRILERLAAQGNMLRMPHSRSLGEGLYELRFSCEGVNRRITYVYDPDRKAVTLTTFRKQRQNERAEILRARRTQAAHLAARRTQRRGKRQ
>NZ_CP015970|2628336:2637232|2629450_2630110_-|WP_015068914.1|DBSCAN-SWA
MPEPIRVLLVDDQSLVRSGFRMLIEAEDGMEVVGEASNGAEALDVLRRIPVDVALMDIRMPVMDGVEATRRIAASPLDTKVMILTTFDLDEYVYAGLKAGASGFLLKDARPAELLSAIRNVAEGEAVVAPSATKRLLEHVVPTLPNNPRESDERLSVLTDREREVLVEIAKGATNSEIAANLYMAEGTVKTHIGRLLSKLECRDRVGLVLFAHEVGLVS
>NZ_CP015970|2628336:2637232|2630593_2630893_+|WP_062819833.1|DBSCAN-SWA
MSTTPWEQVRDESLAAMTDEERDDYDAAAVEAEARLQLAELVYNARTAAGLSQTELARRANTRQSVISAIENGAQAPGGVMLARIAHALGGTLEIQVAA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062820783.1|2628336_2628993_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-33	41.9
WP_015068914.1|2629450_2630110_-	response regulator transcription factor	NA	NA	NA	NA
WP_099093034.1|2630246_2630597_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_062819833.1|2630593_2630893_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015068916.1|2630981_2631284_-	putative addiction module antidote protein	A0A141GEX5	Brucella_phage	3.7e-09	41.9
WP_082815999.1|2631280_2631517_-	addiction module killer protein	A0A141GEX6	Brucella_phage	1.8e-14	52.3
WP_062819835.1|2631714_2632926_-	RtcB family protein	A0A1I9SAD2	Rhodococcus_phage	3.5e-106	51.6
WP_062819836.1|2633475_2634918_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	3.0e-32	28.6
WP_062819837.1|2635429_2637232_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-30	26.0

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP015970|3473467:3489062|DBSCAN-SWA
ATCAGGCAGCGTCGGCGAGCAGCCAGTTGAAGAACTTGCCGTTCGAATCCTTGAACAGCTCGATCGTGGTCTTGAACGACACGATCTCAGTCTTCTTGAACGTGATGTCGTCCACGCCAGTCACCTGACCGTCACCGCAGTCGAGAACGAACGGGCCGTTGCCGTCCTTCCCGAGGAACGCGAACTGTCGGTGCGCCAGAATCTCACCGGTGTAGGAGATCGACTGAAGCTTCCCCGACGTCGCATCCACCACAACGTTCTGGTCGCCGAACAGCAGCTTCGCGACATTCCCGCCAACCTGGCCGAACGTCACCTCGATGGAGCACTCGTTCGACTTCTGAATGACGGCAATCGTGTCCAGATTCCAGTCCAGAACCTTATCGGTCGAAGCGTCCAGCTTGACGGCGATACCGTCATCGGTGACGTATCCGAGATCGAGGTATGCGACGTCGAGAGTGCCGGCGATCGTTGACGGACGGGTCGAGCCGATCGGAGCGTAGAACGCATACCCGCCGGTCGTTGCACCTCCGCCAACCCTGACCTCATTGGTCGTCTTCCCAATAGTGGTAGTCATATCATGGCCTTTCGAATAGGGTTAGCCGCCGCCATTCGGAAGATATTCAGTTGTGCTAGTTGTCAGGGATTCTGCATGAGAATAATCGCTGACCCGGTGTATCGGGGGATGCGGTTCTCGTCGGGAAACCATCGCGGCCTGGTGCATGTCACATCACAGATCCACTGCCCGTCCTGCTCGGTGCCAGCCAGACTGTCGAACGCATCGCGGACTGTCAGCGCCAGCAGGGCAGCGTCGGCGGGGGAGACAGTGGAGGACGCCTCCCAGGTCACCTGCACCTCGTCGAGCACCCAGTCGCGGATCGCCGGCCCGCCAGCATCCACGACTCGCACGAAACGTCCGTCAGGGCGCGGATCTGGGATCTCGGTGTCGACGGGGCAGTCGAGCTTTCCGGGGAGCACGTCGATCAGCAGCGACGCAATGTCACAGCTCACTGGCCGACCTCGGAGACGGCGCCACGGGGGCACCATCGGCGGGCATATCAGGGGTGACATCTTCGACAGTCGTCTGGCCGTCGCGGTGCACCTCCACGGTCACCCCGCCGGCGTCAATACGGACCGTGACAGAGTCGAAGTCGGCCATCACTCGCCGTCCTCCTGACCCTGATCGTCATGCATCTGGTAGTCGTCAGGGCCCGGATCGTCGGGGCCGTCCTCGTCCGGGGCGGCAACCTGCACCGCATGGCCGGAGAAAATCATTCCATTCCCTGCGGAACGCCCAACCTCGACCGTCTTCCCAGTCTCGGCGACTCTGATCCAAATCGTGTCCATCATTCACCTCCTGCCAGCCTGCAAACAGGCCATGAAATCCGCCGGATGCTTCATCACCAGCCGGATAGCGGCCGGAGTAGCCGGCCGGACCGTGTACCGCGACCTGTGCTCCGACTTCTCGTGCAGCACCTTGAAATGAGGCCCGGACTCATTGAGCGTGTGCGTTGCAGCCCACGCCTCGCACTTATCACGCACCGCAACAGCCATCTCCAACACCATGTCGTCAACGGGCCGTTGTTTGCGGATCTGATCCCATGCGGCACGGTTGAACTTCAGTTTACCTTTGCGTGTGCTAGCCACGGATCTGCTCCACCGTGAAAACGAAACCAGGGCTGTAACCGTACGGGCCCTGGTTCCAGTCCGACACATCCTGAGTGACCTGCCAGTCTTCGCCATCCATGACAAGAATGTCACGGTTCGCAGCAGACTGGTAGGCGTACACAGTGCGCCTAGTCACAACCCTGTTGGCCCCAGTCGTGGGAAATTCCGTCGACAATGTCGGCGACCAACCCATGATCGGAAAGTCGACCGGGTCAGCCCACACATCAGCGGCACCCGAATGCGCAGATCCGGTTCCTTTAGACCACCGGCGAATCTGCACAGATGTCACGGTGTCCTCCTCGGAGGGCGTGCAAAGAGCCGGCTGTAATCAGACGCTGGCGGGAAATCCCAGCGCGGCAAACCCGACACCTGCTGTGCATCCCCGCACAGAGACCTCAGATCTGCGATGTCCTCATCCGTCAGCCCAGACGCAGAATCGCGGAAAGTCTCCGAGAAGGGTCCGGTCGTGTGCTGTGTGACACGGCCGCCCTTCGACGACACCAGCCATACCGCAGCCATCCGGAGAATCGAGACGACAAGATCGCGGCCTCCATCGTTCCCGGCCCACGTCGGGCTGAAAATGCACGGGGCGACACGGCGGGCCTTCGCCTCAACATCAGAAATTGCCTGCGCCACCATGTCGGGTGTCGCCTGCACCCACCCGGCCAGATCGTCGGCGTCCAGGAAAGTCCCCACCGTGCCACCCCCTCACTCAGCCGGCTGTCTGCTCGCCGTCGGTCTTCTTCGGGCGCCCCGGCTTCCTCTTGACCTCAGACACAAGGCCGACAGAGACCAGATGCTCTACGACCGCACTGTCCACGTCATCCGGCAGCTGCGCTCCACGGGGGAACGTGCGATCCACATCTCCCACGCGCACCACAGCTGCCGGGCCGTTCACAATCCAGGTCACGACAGGCCGGTCCCGGTGATACGGACCCCGGCTGCCGGACGCAGCACGACGGGGACCGTCACGCGGCGTGCCCGAAGCTCGTAGGCGTCACGGCCCTGGAGCCGCTCAGAGGCGAGCTGGACGTTGTTGACAACGGAGGTGAACTCCGGAGTCTCGATCGCCTCATCGGCCATCCCGCCGAGCTGCTCACGGTCCAGCAGGAGCGGGTCGGTGAATGGGACGTTCGGCGATGTCATCCAGGTCAGCCCCATGACGGTCGGCCACACGCCGTCCAGCAGGGGATTGCCCTGCTCGCGGGGGAGGAACCCTGCCAGCAGCAGCTCGGCCATCGCAGTCTCGTACTGAGACTCGGCGAGCACCACGGTGTCTGGGGTGAGCCCCAGCTTCAGCCCCCTCATCTGAGCGGCGGCACTCTTGATCGAGGTGACAATTCCGCGCACGTTGTCAGCCGCGTCAGTGTTGCCGGTCCACGGCTTCGATGACGGGAAAGTAGCCGTGACCTTCGACGAAATTGTCGACATGGCGATCTCATCGGTCTGGCGCACAACACCATTCGACAGGAAAGTGAATGCCTCATTGACTGGGTTGAGGAGAAGCCTGGAGATCTCCTCGTCGGTCACATGAGTGCCGAACCCCCGCTTAGTGGTGTGGGAGATCGCCAGCTGACCAGAATCCATCTGGGTCAGCGGGTACTGTGCGCCGGGAGCAACCTCCTCAGGCTCATCCTCAGGGTAGATGTCGAGGTCATGGTCGGGGTAGACGATTGCCCCGCCCACAGCCTGGTACCGGCCGGTCAGCAGATAGTCGGCGATGAAATGCTCATCGACCAGCGACTTGAATCGCTGTGCGAGAATGGTCGGATTCTTCAGCAGGTAATGGATCTCAACAGCGGTGAGGCTGGTGTCGAGACCGGCGGGAGCGCCAGCATACTTGTACATTCAGGGCCTCCTCAGCGGGCCATCTGGACTTCGACCTGGGCGCCTGATGCGGCGGTCTCCAGGGCGATGCCAATCGGATTGTTGGTTCCAGTCGCGGAAACCTTCCCAGCAGCTGCGGAGAAAACCTTCACGCCAGCTGCGATGTCGCCGTCAGCGACGGGACGCTGCACGCCACCCAGGGACACCGAAACAGCCTGGCCGGTCTTCGCGTCGGACAGTGCCACTCCCAGAACTGCGGCAGAATCAGCAGCAGACGGGGCCACGGTCTTCGACCCTGACACAGCGACCAGCTGGCCCCCAGCCACATCAGCAGATGCGCTGCGGGTGATGACAGAATGGGTGTCGATCTTCGGGAGATAGTTGGACATCAGCGAGCCTCCTTCTCGGAATTGCCCCACGCCTTCGCGTAGATTCTGTCGGCCTCGTCTCCGGCCTCATCGACACCGCCGGTGTAACCGATCGGCTCAGTCGGGATGACCGGCTTGAGTCGGTCGAGAGCAGCGGTGAATCCCTCCTCGTCGGCGCTGAGGGAAGTCAGCCAGTAGTCGCGGCGGGCGGGCGGGATCTTCCCGTCCGAGATTGCCTTGTCGACGATCTGCTCGCGACGCTCAGCATCCTGCGCGGCGATCGCCTCGGCACCCCTCGCCGCCGCATCCTTCAGCTCGTCGAGCTTGGTCTGATCGATGGTGACAACCCCGTCAGGAATGTCACGCCTCTTACTCATCGTGTCGAGGGCGGCCAGAATCCCGGCCTCGTCGGCATCAGGAGTCCCGAGCCGCGCCCTCACCTCGTCAATGAAAGCCATCTCAGCTTCCCTCTCATGGTTGGTTTCCGGCTCGGCCGGACTAGTAGCCGCTGCTACCCGCGCCATAGGCCCGGGGAAATCAGGTGCGGGAGCATTCTGCCGCCCCGCAAAATTGAAAATGTGCATGTCGAACTGGTCGGTTGCCGACGCCGTCTGAGAATCATCCACAGAATCAGCAAGCCCCGCCTCAACAGCCTCATCCGCCGTGTACCACGTCTCGGCGCGCATCACATCACGCCAATCAGAGACGGCACCACCGGCCTTCTCCGCATACACAGCAGCCACAGAATCAGAAACCTTCGACAGCATTTCCGACATTTTGTCCATGTCAGCCGCCTTGCCGACACACACACCAGAAGCATCATGAATCATCATCTGGGAATTGCGGCCCATCGTCAGAGTGTCACCACCCATCGCCACATAGGATGCCGCCGACGCCGCCAGACCGTCCACGGTCACATTGACCGCAGCCTTCTGGCGGCGAAGCGCATTCATCATCGCAATCCCACCGAAAGCGTCACCGCCCGGAGAATTCACGAAGACATTCAGCTCATCAACGTCCAGACCATCCACAGTCTGGACGAATTCCGTCGGATCGACACCATCACCCCAGAAATCCTGCCCAATCGCGCCATAAAGATGCAGATCGGCCGACTTCTTGTCGACTGAGAGCTCGCAGGTGAACACCCCGTCAACCTTCATCGCTGGCTTTTTCGCCATCACTTCCCCCTTCGGGAGTGTTATTTGAACTGCCAGCCACCGACTGCTGCACACCGACCGACTCCCGTGTCGTACCAGGGTCAGTTGGCGGCAGCCCGTACCGCTCGCGAACATACGTTTCCAGAACGTCATCAGGGCGAATCACACCCGTCTGAACCAGCGACTGCATCGCCTCAGCCGTCGCAGGCTGCTGCGACCCGATCTCCTCAAACACCAACCTCGGCGCCGGAACATCGGTGCCGAAATTGATATCGACCAGATCCTCAATCACATGCCTATTCGCCACATCGGCAACCCATTCGGCGACCGTCTGCAAGCTCATGGTGAAGAAGTCGGCAAATGTGGTTCCCAAAGCCCACGACCCGGTCTGAGTGCCGAGATTCAAGAAGTGCGCCAGAACGCTCCGTGCGATCTGTTCGTCATAGTAGGAGATCGGAGTGTTCGCGTCAGGAAGCGTGCCGTTCGGTGCGAGCAGCGAAAGCTTCGCCCCATTCGGAATTGACGCACCAGCATTCTCGCCACCACGGAGATTCGAGACGAGATCCTCGCCAGCCTTCGCCTGCTGGTCGAGCCATTCATCCTCTCTGGCCGAACCGGCCATACCCTCAGGGGTCGGCGGGGACTCGTAAACCGGTATCCCAAGGCCGTTCCGCTCCAACGTCGTGGACTGGATTTGCAACGCACGCTGTTTCAGAATCCACGGGCCGTAGGCCGGGCGGAGGATCGACTGCCCAAGCCAGTTCCCGCCCTCACGGTCATTGACATAGGCCACCAGGTTCGCAACGGGAATCTGCTCCGATTCGTACTGGCAGATTGACACCAGGCCGCCATCGGAGTCAACATTCACCCCAGATATTGTCCGTGGCGGACGCCAGCCGAGCTTGTGCAGCGTGAACAGACCATCACCGGTCTTCCGATACACCTGCTCAAAAAATGCGTGCCCGAAAGGCAGAGCGGTCAACGCCATCCGCAAATGATCAGACCACGAGAACCGATCACCCATCCTTAACGGCGGCGTCCGATCCCCCTTCACAGGAAGACCCACAGCATCCGCCACAAACCGTGTCACCACAGGATCGCAACCGGTCCCGTCAATAGACCAGGCGGTGCGGCGAATCGGCAGCGTTACAGCACGCAGAATCGACGCGATCTGAGCATCCTCGCGCCGCATCCGATCAAAAACGCCGACCGACTTCGGCCACCGCAAATCCGGATTGTCCTCATCGTCTGGCGCAAACCACCACAGACCGGTATCTGTCCACCACTTCGGCAGCTGATAGCCAATCTCAGATGTCGACGGCATTCAGCGCCTCCTCAAAAATGCATGCCCATCACGGAACTGCGGGAACTAGAGATCGGGTCACGGCCCGATATTGTGCGCGCGAACGGCACTTTCGGCGGCGTCGCCACAGGCTGCTGGGCAAGCCACACGGCCTCAACCCACGCCATCAGCGGCGACGCGTCGCCCGGCGACTTCTTCCGGTCCACCACACCCTGATCACCCCGATAGGCGATAGATGCGGTCGCGGCAGCAACATCCAGCTGCGCCTGCGGCGTGTGCATGACCTTCCCGTCACGCACCATGTCGTGCACGATCCCGAAGCACCTCATGGTGTCCAGGTCGACGTGCGGGATCTCCACCTCAGGATCATCAGAAAGCTGCGACACCAAATCTGAGATCTGCGCGCCACGGGCCTGACCAGTCCACGCCGAAACCTCCGACGCATGCTCGACCAGCCACGGCTTCACCCAGCCGACACCCTGTTCCGCATGCCACACCTCACCCTGAATCACACCATCAGGGCGACGGCCAGCACGACACAGCCACGTATGCGACCGATCCAAAGACATGTCAACCGACACCACCCACGGCGCCGAGATGCGGTCCTCCTGGGCGACCGTCACAGCACCGCTGGAATCCTCGACGAGCTGCACCACGCCGCGATCCCACGCCCCAGACGGGAACGGGCCATGCAGTCCGCCATCAGGCCACTGGCACTCAACCTCGGTGCGGAAGATCCACTCTGTGTCGGCGCGCTGCCCCTCAGTCCGCGCATCACCGGCGATCGTCGACTCAGAGATGCAATAGCCCATCGACGGATTCGCCTGAGCCCAACCGTCACGGTCCATCACGTCACAGCCCGGTGCAGCAGACCACTCGAAAATCCCCAGAGAATCCGGGTCCTCGTCGAAGTCCTCAGGCGCCAGATCGTCGCCATCCTCGGCGGCGAGATCATCCATCCCCGCGATCTCGTCGACCGTAGGAGTCTGCCGCGCCTGCTCGGCCGCGTTGATCCCATCCGGATCGCCCAACGCCTCATGCGCCATCGCACGAAGCGTCTTCAAAACCACGGACGACATGTCGCCGGCATTACTGAACGTGGCGATCAGGGCAGCAGGGCGAGCGTTCGTCGTCTTCGTGATCGCAGCCCACGCATCCCACGACTGGTGCTCACGAAGCTCATCGAGCATCACCAGATCGCCGGACAAACCGCGACCCGCCTTGCGGTTCGCAGCCTTGACCTTGTACCGCTCGCCGGTCTTCAGCCGGATTGTCTTCTGGCCGTTGACACGGATCGGTTTTTCGGCGAGCTTCGCCAGATCCGGGGTGTCATCGATGATGTCCTGGACGCCATCCCATACCTCGGAGGCAGTGTCCAGATCCTGCGCCGTCCCCAGCACCAGATCGACGCCCAGCACGAACAGGAAGAACAGCGCCAGCACCTGGCTGACAACGCTTTTACCGTTCTGTCTGGCGACGAGAACGACAACTTTGCGGAACCTGAACAGCGGCTCCATCGGATCACGACGGTCCAACGTCGACACCGTCAGATCACCGGCAAGCTCCAACATGTGCACCAGCAGCCACCGCTGCCACGGGAACAGATCAATCCCACACACATCCCGTGCGAACTCCGCCGCCGCGAAACCCAACGAAGTCTCAGACGTGAGCTCCCGCAGGGGGGGAGTGAAAATCCTTGGCTCAGTCCGCCCATGACGGACCTTCTTCCGAGACCTGCCACCAGACTTCAACCTCGAAGCGCTGGTGACCATCTCACACCACCTTCAACCCCTTGAATTTGTCCATCTTCGACGCAGGCTTCTTCGGCTCCGCCGGCTTCTTCGCGTCGGGTTTCTTCTCCATCGTCAGCCCCAACGCCTCACAGAACTTCAGGAACGTGGGGAACACCGTGTTGTCGAAACGGCCACCCTCAGACACCTGCACCGCCTGATCATCAATCAGCAACGCCAACGACCGGGCAGCCGCAACAGTCGCCGAATTCCGCTTCAACAACCCCGGAGAAGCCCGCAAAGAATCCTCCAAAGCCTCCGAAACACTCTTCATCGGGAACTTGTCGGACATCATCGCTCCATGCATAAATATTAGGTCCATCAGCCCGCGCGCGCGACCCCCCTCGTCAAAATCGAGGGGAGGGAGGCCGGTGCCGGCCGTGGAAGTGTCCCGTGCTTGGGCGCTGGCTTTTCTGGGTGGGGGTGGGGGCATGAAAGTGCATGGGGCTGCAAGTTCATGCATCCGGGGTGAATATGCGTGTCGCCATTCAGTATGTGATTATCGGCGCGATTGGTTCGGCCTTATGCATTTCGAGAATGGAATTCCATCCTGGAAATTCGGACACATTATCGTTATGGTCGAATGCGATGAAGTATCCGGCGATGCCTTGGAGGCTTTGCTTCTCGTCGCCTCGGTGCCGTTCGATGACGCGCTGTCGACATACGGCTTCGGGCGTGTTGACGAGGAAGGTATGTGTCGCGCGTGCGGTGCGTCGTGCCCTGACGCGGGCTGTGGTGGTGGCGCCGGAGCGGATGATGACGGCGCGTGCGTGCGGGTTGGCGGCGATGCCACGCATGGCTTTGGTGAACTGCGCCCGTGATGTCCATTGCGGGTCGTCCCAGTCGAGGATGTCGAGCTGGTCTTGTTGGTGCGCGATGGTGGTCTTCCCTGCTCCTGGTGGGCCGCAGAGGATGACGACGAGGCGGGATTGTTCGTCTGGTGGTTGCCATCGGTCGCCTGCGCGCTTGTTGCAAACACTGTGCGCCGGCGCCCAGTTGCCACGGTCCCAGGTGAGTTCGGGGAAGCGTGAGCGGGGTTTGATGTGCTGGACGGAGCAGGACCAGTCTCCGCCGCGCAGATCGTAGTCCAGAGGCTCCCCACATATACAGCAGGGCAGGTGTTCGCGTCGGCCTTTGGCGCGGACCCAGCGGAGTGCGTCTTGGGCGGCGCGTCCGGACCATGGCCTTACCTGCACCGTGACCTCCGTGGTGTGCTCCCGCGTGGGACGAGGGGCCGCTCTCGATCAGGCGGCGCGTTCGCCGACGCCAGGAAAGTTGAGGGCAGCATACTCGCCGAACGTCTTACGGGCTGCCAGATCGTAGGCGACTGCTGCATCAATGGGATTTTGGAAGCGCCCGAGTTGCTTATACCGACCATTGAATCTGATGTAGGACTTCCAGCTGGAAGTCCTACGATCCCAGCAGACACCCTTGTAACCTGAGACGTTGTCAGACGGACGACGCATGTTGTGCATGTTCTCGGATCGTGTTGCTTCTCGCAGGTTGCACCGCCTGTTGTCAAGTCCGTCGCCGTTGATGTGATCCGTGATCGCGTACCCGGTGATGAACTTGTGCATGTACATACAAGTGCGTCGGCCATCGGACGTACGGACGGCACGAACTGCATATGCGCCGGTGGCGCGGATTGTCGAACGCCACTTAAACGCCCCGACGGAAACCGCATCTTCCGCATCTACCTTGGCGAAAAGACCTTGAGTGAGTTGGATCTCAACCCAGTCACTTGATGTACTGTTGCTCATAGCCGACCTCCTGTGTCGGTGAGGTCCCGGGTTCGGTGTTGGTAGCACCGCCGGGGCCGTTTCTTTTTCTGGTGTGGCCCCGCATGGAGCGAGATTGCCGCTCATATGTCACTGGCTGTGCCGTGGCGTCGCGGATCTGCGCTGTCCGTGCGGGAAGTGTGCGCCCGGATGAGTGGTGCCACTCCGGGCTGGCGGCTGCGGATGCCCTGTCCGCACAGTGCCGGGGCGGAAAGGAACACCCCGACACTGGCCACGACTGTGCGCACCGTCCCGGCCCTGCGAAACCGCAGGTGTCCGGGGCGGCACTTCCTGCCCGTCATCGGCGGGAGGCATGAAAAAAGCCGCCGACCCGATCAGGTCCGACGGCGTACTCAGGAGACACTTCTCCCGACTGCTGTCACGCTACCATGTCTTGGCCTTTCTCGCCAGTGTCGATGCCGGGGAAGACGAGGAGCACGATGTCCCACGGTCGCCACCAGTGCCGCTGGCCGGCCTCAGGGTCGTCACTGGAGGACTGGTCGGTGTGCACCGGTCTGATCTTGTGGCGGCGCTTCCACTGGCGCAGACGGCCGGCGGTGAGTCCGGGGATCAGCTCGACCGCCTCGGAGGTGGTAACTGCTCGGTGCTGTCGCCAGTCCGCTGCGAGTCGTGCTGCGCCGGGGTACTCGTGCTTGAAGGGTTGCCAGCGGGTGGCGTGGCAGACGAGCATGTCGCCCATCGGTTCGAGGTGGGAGCGGCATCCCTCGTGTGGGCAGGGGATCTGTGATGGTGGTCGCAGTCCGACGGCCTTGGTGAGGCACCGGTAGGTGTCGTCGAGGGTCATGTCGACCATGTCAATGTCGGCCTCGTCGAGCCAGGCGCGGGAGTCGCCCCACACGTCGGCCAGCCAGGCGCACTCGGTGCCCCAGGAGACGGTGCCGATGGGCTGCGGGTGTGCTGCCTTGGTGTCTGGGTCGAGGGCTTCCCAGATGGGCCGTGAGCACCACATGACGAGGGTCTGGAGTTCGGCTGGTGTGGTGGGTCCTTCGGCGAGGTCGATGATGTCGAGGCGTGCTGCTGGCCGTGACCCGAACGTCGGGGCCGAGTGCTCGCTGGTGGTGCCGTCGGGGTTGCGGGACTGTCCGATCTGCGCGGCCATCGCGGCCAGTGCGGGCATCTGGAGGAGCCTCTCGACTTTGCACTCGGGTGGGATCCACTCGTCGCGCTCGTGCAGCGGGGTGTCGTCTGTCACGGGTTCCTCCTGGTGGTGATGGCCATGTCTGCGATTCGTGCGTCGATGGGTGGCGCTGATTGTGGGCAGGGTGGGCGTGGTGGTGTGGGCAGTGTGAAGCGGATGTGGCGTCGGGATTGCAGCGTGATGCCGGTCTTCGCGATCTGGGCTCCGATGTCGGCGAGGCTGGTGAGGATTTCCTTGACTGACAGCAAGGTCGCTTCGGATATCCGCTCCAGCATGAGGCCTGTCTGGTCAGTCATGCGTTCTTCAGCATTTCGGAGACGAGGGTGAGCGCCTGGTCGGTCGTGAAGCATGCCTCGACCAGTGCGGTGTACATGGCGAACATCTGACGTGCTCCGATCACAACGTCGTCTACGGGGTTGTCGCTCATCGGGTTCTCCTGGTGTGGATGTAACTGGTGATGGTCCAGGCGAGGTATGCGGCCAAGACGACGGTGAAGATCCAGTCGGTGACATCACTGCTGGGGTGCAGGATGGCGCCGGACAGCCAGGTGGAGGCGAGCACGAAGATGAGCTCGATCGCGGGTCTCCATCTCGCCCACCAATCACGTCTGGGTGCCTCAGCCTCGTCGTTCTCGTGGGTTTCGCGGCCGTCGAGGCTGTGGTGGGTGATGACCCAGTCGATGGTCCCGTCGTCGTGTTGGATGGATTCGATGGTGGGTCCGCAGATGCAGTCCTCGGAGTCGGTGTGGTCGATCAGGTCGTCGACCGGAAGCACGTGCAGCGTGGTCATCGGTGGTCCATCTCCCATTCGAGGCAGTCGATGGCGTCATCAAGGAGGACGAGCGATCCACCGTGGCGGGTCTTGTTCCATTCCTCGATGACCTTCCTGGCGATGGTCTCGATCCGTTCGAGCCGCTCTTGCTTCTGCCTGCTCATGCGTTCGCCTCCTTGGTGATGATGGTGTGAGTGGTGGCTCCGACGGCCAGCGCGTATCGGCGGATTTCAGAGAGACGCCAGTCCACCTCGGGGCCTTGACGATCCAGCACTGCTGCGTACTCGGGGAGGACTCCCATGCGGAACGCGACCTTCTCGATGGACAGCCCGTGTTCCTTGCGGATGGCGACGAGACGGTCGATGAGCTGCCAATGGTCTTTGATGAGCAGGTCTGCGCGGCGTTCCAGTTCGGAATCGGAGGTCATCAGTCCTCCTGCCCGTCGAGCATGTCGTGGATGAAGTCGGGGTCGTCGTAGGCGTCGAGGATGTCGAGGATGGCGCCCTTGGCATCATTGATCCCGCACTTGTACCCAAAGGTGGAATCCACTCCGAAGTCGGGAAAGATCTCGTCGGCTCGACGTCGGGTCTCTTCGAGGTCGTTGTACAGGTTGGCGAGGATGCATTGGACCTCGACCTGCTCGGCCTTTCGGAGTCCCTCGTTGGTGAGGATGTGCATTTCAGCCCTCCTCGGGGTAGGTGACGACAGGGCAGTCGAGGTCTCGGGCGGCGATGGCGGCGATGGACTTCGTGGTGAATCGGGAGCCGAGGTGGGTCAAGTGGCAGTCTCCGGATGCCTCGACCTCGACGATGGCCCACTTGTCTGTGGTGGGGATGGGGAAGATGACGATGCGCGTGATCTGCATGGCGTGGTCCTTTCGGGAAAGCGGTTTCTAAGGCTCTGGGAGGTGGTGGGATGGGAAGATGTGCCTGTCAGGGCTGTGAGGCCGTCAGATTCTCGACGCCATCCGTTTCTGGGGCATCTGCGGGCCCGCGCCATGTGCCGGGGAGACGCCACATTGACCTGTCCTCGTCGAGGATGAGTCCTCGCTCGACCATCTCGGCGGCAGTGAGGCAGCGGCGACGATCAGGGCCGGTCTTGACGCCGTGCTTGCCGACACGGTGCATGTCCCCGGCCGTGGCCCCGGTGAAGGTTTGGTGACAGACGGTGCAGTGCTCGGCGCGATGTCCGTTGACGACGGCGTGGCAGGTGCGACAGGTGAAACTCATGCTGTGTGCCTTTCTGAGACGTTTTCGGGGCCGGGGGTGGGAGTGTGTTCGGGTTCGGGCTGCCGTCCAGCGAGAGGCCCTGTTTTGTGCGTCTGGCGTGGGTCGGGGGGCTGATGAACCGGAACAGCGCGCCACTGCTCGGGTGTGGTCCAGGGGTGGTGGTCGTCGGTGATCGCTGCGAGGTGATCGTGGCCGGCGCGGGTGTGGCCGCAGATCTTGCATCGGTTGGTGGCGTCCTTGGCGGCGGGCTGTGGCACCCCTGGGTCCCCTGCGGGTCGCGTGGCCTGCCACCAGGGGCCAGAGGCAAGGACGCGGGCGGGCGTGCGGGTGTCGGTGTCGAGTGCGACCAGCGCCAAGGCGACCATGACGTCCTCTGTCGGGCGAGCTGCCAGGTTCTTCCAGATGAAGCTCCGCAGCTCGGGTGCTCCCCAGTCGGGACGGAGCTGGTTGATGGCTGCTGCGATGCGTGTCACGTCGGTCTTGTTCATGATTCTTCTTTCAATTTCAGATCCAGATCCGGCTCACGCGCGGTCTGAACTTGCGCTGAGACTCGCCTTGGGCTCCCGCGTTACGGATCTGGATCTGGATTAGAGACGTAAGAACAGATAAGGGGTCGGGTCGGGTCGGGTCGGGTCGGGAAGAGCGGGACATGTCCGTCAGTCCCGCGTCAGTCCCGCGTCGCGTCCGGATTTTGTCCCGGTGGGACAGACGGCGGGACATGTCCGTCAGCCCCCCGTCGCGCGGCCTTCTTCTCCCTCCACTCACGTTTCCGGTCGGCCTCCTTCTGTCGGTCCTCGCGCACCTTCTCGGCGGTCGGGTTGTAGCTGGTGAAGTCGTGCATCTTCCAGCCGCCTCTGGTCTTGACGAGTAGGCCGGCCTCGGTCAACTCTTGGGTGTCATCCTCGGTGGCGCGGATGAGCCCGAGCACGCCCTTGGGGATGAACCCGTCGGTGAGCTGCTGGCTCGACCAGGAGCCCATGAGCGTCCACACGCCGATCGCCTGCGTGGAGCATTGGAGCGCCTTGGGGTGGCTGAAGAACTGGTCGTCGACCTTGAACCAGCTCACGGCTCCTCCAGGTGGTCCCGCGATCCGGTCATGAGGGCGACGAGTTCGGCGAGGGGGGGTATGAGCTTCTGGTAGAAGTTCTGCTGCTCGGCGTTCAGGGCCGTGTAGTGGCTGGGGTGATGGACAGGATCAGGTGGTGCAATTTTGAGTTCGTCGCTGATCATGTGCCCCCCTTTCAGAATGGGACGAGTTGACTGGTGATGATGATGTCGAGGGCATGCCAGCCCTTCCCGAGGCTCGTGTCGCGGCGCGAGCGCAGATAGCAGATTGCCGAGACATTCCGGCCGTCATCATCAGGCCATATTCCGGCATCGGTCATCCCGTCGATAGCGGCTTTGAGTGTCGGCGCACAGCCATCTGAGTCGAGTCCTCGTCCGGCACGGAATCGTGCACGGCAGGCGACGAGGACCGGCCCGTCAATCGGGGTGAGATGCTGGCGGGCAAGCACGGCAGATCGGCGTCTGACGGCGGCGACACGCCTTGCTTTCTCACGCCAGTGCAGCCGATCATTCGACGTGATCCATTCATTCGCCGGGACCTCGATCCTGATCCTCTGATCGGTCATGCGGCGTCCCCCTGTTCGATCGCCCACTGCTGGGCGGTGGTGCGACCGTGGGATTTGGCCCTCTGGAAAAGGTTCTGACAGGTCCGGCATTGCGTGCGCCCGTCCGCCTTGGGGATGGCGTTGTGGCCGTCGACGAGGTGGCCGCGCTTGCAGGTGCGCGGCTCCTGTCTGGGTTTCCCGTCGATGCCCCACCAGATGCCTGCTTGGACGATGCCGCGTGGACCGATCCGGCGCTCGACCATGTCGTCGGTGGCGCGTCGGCAGGCGTCCAGGAGTGGGCAGCGTCGGCAGGTGTTGACGCAGTATCGGGCCTCGTCGGCGCTGATGGCCTCGGTGAAATCGGCGATGCGACGGCATAGGGCGTCGTCGGTGGTGAGCATCACGCCTCCTCGTCGCACATGCATGCGCCGGTGACGGTGCGGACGGTGTGGCAGACCGGGCACACCTCGCGGTTGGGGTCGTCGGCGTCGGGGTGCTGGGACAGGGGCAGGCAGTCGAGGTGCACCCACTGCCCCGTCTCGGCCTCGCGCTCGATGGCGTCGCCGTCGAGGATGAGGGAGTGGCAGCCCCAGCATCGGGCGGTGAATCTGGCGGTGATCATTCGGAGACCTCCTCATAGGTCGCGGCGAAGATGTCGGGCTTGACCGGGTAGAATTCGCCCGCCACGCCGTGAATGATCCAGTCGCCAGCGAGTGCCTTCATGCTCCCCTCGATGGTCTCGACAGATCCCCATACCCACTGCCAGAAACTTCCGTCTGGGAATGGCTCATCGGCTTTCTGAACTGAACAGCCGTAGACGTATAGCTTGCCGCCGTGGGCGTCGATCCACTCCAACACCTCTGACTGTTCAATCCCTCCTGGGCCGAACCTCATGGCCTCAATCTCGACGGGCTTTTTGGTGAACTTCTTCGGTTGCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP015970|3473467:3489062|3488523_3488745_-|WP_062820311.1|DBSCAN-SWA
MITARFTARCWGCHSLILDGDAIEREAETGQWVHLDCLPLSQHPDADDPNREVCPVCHTVRTVTGACMCDEEA
>NZ_CP015970|3473467:3489062|3484563_3484809_-|WP_126132989.1|DBSCAN-SWA
MTDQTGLMLERISEATLLSVKEILTSLADIGAQIAKTGITLQSRRHIRFTLPTPPRPPCPQSAPPIDARIADMAITTRRNP
>NZ_CP015970|3473467:3489062|3474463_3474622_-|WP_157773958.1|DBSCAN-SWA
MADFDSVTVRIDAGGVTVEVHRDGQTTVEDVTPDMPADGAPVAPSPRSASEL
>NZ_CP015970|3473467:3489062|3487575_3487743_-|WP_157773960.1|DBSCAN-SWA
MISDELKIAPPDPVHHPSHYTALNAEQQNFYQKLIPPLAELVALMTGSRDHLEEP
>NZ_CP015970|3473467:3489062|3482064_3482772_-|WP_126132991.1|DBSCAN-SWA
MQVRPWSGRAAQDALRWVRAKGRREHLPCCICGEPLDYDLRGGDWSCSVQHIKPRSRFPELTWDRGNWAPAHSVCNKRAGDRWQPPDEQSRLVVILCGPPGAGKTTIAHQQDQLDILDWDDPQWTSRAQFTKAMRGIAANPHARAVIIRSGATTTARVRARRTARATHTFLVNTPEAVCRQRVIERHRGDEKQSLQGIAGYFIAFDHNDNVSEFPGWNSILEMHKAEPIAPIITY
>NZ_CP015970|3473467:3489062|3476037_3476370_-|WP_099093044.1|DBSCAN-SWA
MAELLLAGFLPREQGNPLLDGVWPTVMGLTWMTSPNVPFTDPLLLDREQLGGMADEAIETPEFTSVVNNVQLASERLQGRDAYELRARRVTVPVVLRPAAGVRITGTGLS
>NZ_CP015970|3473467:3489062|3486216_3486513_-|WP_062820306.1|DBSCAN-SWA
MSFTCRTCHAVVNGHRAEHCTVCHQTFTGATAGDMHRVGKHGVKTGPDRRRCLTAAEMVERGLILDEDRSMWRLPGTWRGPADAPETDGVENLTASQP
>NZ_CP015970|3473467:3489062|3481559_3481868_-|WP_062820850.1|DBSCAN-SWA
MSDKFPMKSVSEALEDSLRASPGLLKRNSATVAAARSLALLIDDQAVQVSEGGRFDNTVFPTFLKFCEALGLTMEKKPDAKKPAEPKKPASKMDKFKGLKVV
>NZ_CP015970|3473467:3489062|3477346_3478504_-|WP_158514120.1|DBSCAN-SWA
MAKKPAMKVDGVFTCELSVDKKSADLHLYGAIGQDFWGDGVDPTEFVQTVDGLDVDELNVFVNSPGGDAFGGIAMMNALRRQKAAVNVTVDGLAASAASYVAMGGDTLTMGRNSQMMIHDASGVCVGKAADMDKMSEMLSKVSDSVAAVYAEKAGGAVSDWRDVMRAETWYTADEAVEAGLADSVDDSQTASATDQFDMHIFNFAGRQNAPAPDFPGPMARVAAATSPAEPETNHEREAEMAFIDEVRARLGTPDADEAGILAALDTMSKRRDIPDGVVTIDQTKLDELKDAAARGAEAIAAQDAERREQIVDKAISDGKIPPARRDYWLTSLSADEEGFTAALDRLKPVIPTEPIGYTGGVDEAGDEADRIYAKAWGNSEKEAR
>NZ_CP015970|3473467:3489062|3486509_3487001_-|WP_062820307.1|DBSCAN-SWA
MNKTDVTRIAAAINQLRPDWGAPELRSFIWKNLAARPTEDVMVALALVALDTDTRTPARVLASGPWWQATRPAGDPGVPQPAAKDATNRCKICGHTRAGHDHLAAITDDHHPWTTPEQWRAVPVHQPPDPRQTHKTGPLAGRQPEPEHTPTPGPENVSERHTA
>NZ_CP015970|3473467:3489062|3488741_3489062_-|WP_062820312.1|DBSCAN-SWA
MQPKKFTKKPVEIEAMRFGPGGIEQSEVLEWIDAHGGKLYVYGCSVQKADEPFPDGSFWQWVWGSVETIEGSMKALAGDWIIHGVAGEFYPVKPDIFAATYEEVSE
>NZ_CP015970|3473467:3489062|3483733_3484567_-|WP_062820301.1|DBSCAN-SWA
MTDDTPLHERDEWIPPECKVERLLQMPALAAMAAQIGQSRNPDGTTSEHSAPTFGSRPAARLDIIDLAEGPTTPAELQTLVMWCSRPIWEALDPDTKAAHPQPIGTVSWGTECAWLADVWGDSRAWLDEADIDMVDMTLDDTYRCLTKAVGLRPPSQIPCPHEGCRSHLEPMGDMLVCHATRWQPFKHEYPGAARLAADWRQHRAVTTSEAVELIPGLTAGRLRQWKRRHKIRPVHTDQSSSDDPEAGQRHWWRPWDIVLLVFPGIDTGEKGQDMVA
>NZ_CP015970|3473467:3489062|3476990_3477347_-|WP_062820297.1|DBSCAN-SWA
MSNYLPKIDTHSVITRSASADVAGGQLVAVSGSKTVAPSAADSAAVLGVALSDAKTGQAVSVSLGGVQRPVADGDIAAGVKVFSAAAGKVSATGTNNPIGIALETAASGAQVEVQMAR
>NZ_CP015970|3473467:3489062|3478475_3479807_-|WP_062820299.1|DBSCAN-SWA
MPSTSEIGYQLPKWWTDTGLWWFAPDDEDNPDLRWPKSVGVFDRMRREDAQIASILRAVTLPIRRTAWSIDGTGCDPVVTRFVADAVGLPVKGDRTPPLRMGDRFSWSDHLRMALTALPFGHAFFEQVYRKTGDGLFTLHKLGWRPPRTISGVNVDSDGGLVSICQYESEQIPVANLVAYVNDREGGNWLGQSILRPAYGPWILKQRALQIQSTTLERNGLGIPVYESPPTPEGMAGSAREDEWLDQQAKAGEDLVSNLRGGENAGASIPNGAKLSLLAPNGTLPDANTPISYYDEQIARSVLAHFLNLGTQTGSWALGTTFADFFTMSLQTVAEWVADVANRHVIEDLVDINFGTDVPAPRLVFEEIGSQQPATAEAMQSLVQTGVIRPDDVLETYVRERYGLPPTDPGTTRESVGVQQSVAGSSNNTPEGGSDGEKASDEG
>NZ_CP015970|3473467:3489062|3485298_3485448_-|WP_157773959.1|DBSCAN-SWA
MSRQKQERLERIETIARKVIEEWNKTRHGGSLVLLDDAIDCLEWEMDHR
>NZ_CP015970|3473467:3489062|3479818_3481558_-|WP_062820300.1|DBSCAN-SWA
MVTSASRLKSGGRSRKKVRHGRTEPRIFTPPLRELTSETSLGFAAAEFARDVCGIDLFPWQRWLLVHMLELAGDLTVSTLDRRDPMEPLFRFRKVVVLVARQNGKSVVSQVLALFFLFVLGVDLVLGTAQDLDTASEVWDGVQDIIDDTPDLAKLAEKPIRVNGQKTIRLKTGERYKVKAANRKAGRGLSGDLVMLDELREHQSWDAWAAITKTTNARPAALIATFSNAGDMSSVVLKTLRAMAHEALGDPDGINAAEQARQTPTVDEIAGMDDLAAEDGDDLAPEDFDEDPDSLGIFEWSAAPGCDVMDRDGWAQANPSMGYCISESTIAGDARTEGQRADTEWIFRTEVECQWPDGGLHGPFPSGAWDRGVVQLVEDSSGAVTVAQEDRISAPWVVSVDMSLDRSHTWLCRAGRRPDGVIQGEVWHAEQGVGWVKPWLVEHASEVSAWTGQARGAQISDLVSQLSDDPEVEIPHVDLDTMRCFGIVHDMVRDGKVMHTPQAQLDVAAATASIAYRGDQGVVDRKKSPGDASPLMAWVEAVWLAQQPVATPPKVPFARTISGRDPISSSRSSVMGMHF
>NZ_CP015970|3473467:3489062|3484936_3485302_-|WP_062820302.1|DBSCAN-SWA
MTTLHVLPVDDLIDHTDSEDCICGPTIESIQHDDGTIDWVITHHSLDGRETHENDEAEAPRRDWWARWRPAIELIFVLASTWLSGAILHPSSDVTDWIFTVVLAAYLAWTITSYIHTRRTR
>NZ_CP015970|3473467:3489062|3473467_3474040_-|WP_062820290.1|DBSCAN-SWA
MTTTIGKTTNEVRVGGGATTGGYAFYAPIGSTRPSTIAGTLDVAYLDLGYVTDDGIAVKLDASTDKVLDWNLDTIAVIQKSNECSIEVTFGQVGGNVAKLLFGDQNVVVDATSGKLQSISYTGEILAHRQFAFLGKDGNGPFVLDCGDGQVTGVDDITFKKTEIVSFKTTIELFKDSNGKFFNWLLADAA
>NZ_CP015970|3473467:3489062|3487180_3487579_-|WP_062820308.1|DBSCAN-SWA
MSWFKVDDQFFSHPKALQCSTQAIGVWTLMGSWSSQQLTDGFIPKGVLGLIRATEDDTQELTEAGLLVKTRGGWKMHDFTSYNPTAEKVREDRQKEADRKREWREKKAARRGADGHVPPSVPPGQNPDATRD
>NZ_CP015970|3473467:3489062|3474813_3475110_-|WP_126132993.1|DBSCAN-SWA
MASTRKGKLKFNRAAWDQIRKQRPVDDMVLEMAVAVRDKCEAWAATHTLNESGPHFKVLHEKSEHRSRYTVRPATPAAIRLVMKHPADFMACLQAGRR
>NZ_CP015970|3473467:3489062|3488140_3488524_-|WP_062820310.1|DBSCAN-SWA
MLTTDDALCRRIADFTEAISADEARYCVNTCRRCPLLDACRRATDDMVERRIGPRGIVQAGIWWGIDGKPRQEPRTCKRGHLVDGHNAIPKADGRTQCRTCQNLFQRAKSHGRTTAQQWAIEQGDAA
>NZ_CP015970|3473467:3489062|3474102_3474474_-|WP_062820291.1|DBSCAN-SWA
MSCDIASLLIDVLPGKLDCPVDTEIPDPRPDGRFVRVVDAGGPAIRDWVLDEVQVTWEASSTVSPADAALLALTVRDAFDSLAGTEQDGQWICDVTCTRPRWFPDENRIPRYTGSAIILMQNP
>NZ_CP015970|3473467:3489062|3487754_3488144_-|WP_062820309.1|DBSCAN-SWA
MTDQRIRIEVPANEWITSNDRLHWREKARRVAAVRRRSAVLARQHLTPIDGPVLVACRARFRAGRGLDSDGCAPTLKAAIDGMTDAGIWPDDDGRNVSAICYLRSRRDTSLGKGWHALDIIITSQLVPF
>NZ_CP015970|3473467:3489062|3485963_3486149_-|WP_062820305.1|DBSCAN-SWA
MQITRIVIFPIPTTDKWAIVEVEASGDCHLTHLGSRFTTKSIAAIAARDLDCPVVTYPEEG
>NZ_CP015970|3473467:3489062|3482820_3483336_-|WP_158514121.1|DBSCAN-SWA
MSNSTSSDWVEIQLTQGLFAKVDAEDAVSVGAFKWRSTIRATGAYAVRAVRTSDGRRTCMYMHKFITGYAITDHINGDGLDNRRCNLREATRSENMHNMRRPSDNVSGYKGVCWDRRTSSWKSYIRFNGRYKQLGRFQNPIDAAVAYDLAARKTFGEYAALNFPGVGERAA
>NZ_CP015970|3473467:3489062|3485444_3485711_-|WP_062820303.1|DBSCAN-SWA
MTSDSELERRADLLIKDHWQLIDRLVAIRKEHGLSIEKVAFRMGVLPEYAAVLDRQGPEVDWRLSEIRRYALAVGATTHTIITKEANA
>NZ_CP015970|3473467:3489062|3485710_3485962_-|WP_062820304.1|DBSCAN-SWA
MHILTNEGLRKAEQVEVQCILANLYNDLEETRRRADEIFPDFGVDSTFGYKCGINDAKGAILDILDAYDDPDFIHDMLDGQED

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062820290.1|3473467_3474040_-	hypothetical protein	A0A0B5A550	Streptococcus_phage	1.7e-07	26.3
WP_062820291.1|3474102_3474474_-	hypothetical protein	NA	NA	NA	NA
WP_157773958.1|3474463_3474622_-	hypothetical protein	NA	NA	NA	NA
WP_126132993.1|3474813_3475110_-	hypothetical protein	NA	NA	NA	NA
WP_099093044.1|3476037_3476370_-	hypothetical protein	A6N200	Microbacterium_phage	1.7e-18	54.8
WP_062820297.1|3476990_3477347_-	DUF2190 family protein	A0A160DCL2	Gordonia_phage	1.6e-14	49.1
WP_158514120.1|3477346_3478504_-	hypothetical protein	A0A2K9VH82	Gordonia_phage	7.7e-71	44.8
WP_062820299.1|3478475_3479807_-	hypothetical protein	A0A1P8VV94	Rathayibacter_phage	1.6e-115	51.2
WP_062820300.1|3479818_3481558_-	hypothetical protein	A0A0U4JKK7	Arthrobacter_phage	5.5e-121	46.5
WP_062820850.1|3481559_3481868_-	hypothetical protein	NA	NA	NA	NA
WP_126132991.1|3482064_3482772_-	hypothetical protein	A0A0U4IL34	Arthrobacter_phage	3.7e-07	40.8
WP_158514121.1|3482820_3483336_-	Fis family transcriptional regulator	A0A0K2FHW0	Enterobacter_phage	3.7e-17	55.3
WP_062820301.1|3483733_3484567_-	hypothetical protein	NA	NA	NA	NA
WP_126132989.1|3484563_3484809_-	hypothetical protein	NA	NA	NA	NA
WP_062820302.1|3484936_3485302_-	hypothetical protein	G1DTV5	Mycobacterium_virus	5.7e-12	65.4
WP_157773959.1|3485298_3485448_-	hypothetical protein	NA	NA	NA	NA
WP_062820303.1|3485444_3485711_-	hypothetical protein	NA	NA	NA	NA
WP_062820304.1|3485710_3485962_-	hypothetical protein	NA	NA	NA	NA
WP_062820305.1|3485963_3486149_-	hypothetical protein	NA	NA	NA	NA
WP_062820306.1|3486216_3486513_-	hypothetical protein	K4HP26	Propionibacterium_phage	3.0e-19	48.9
WP_062820307.1|3486509_3487001_-	hypothetical protein	NA	NA	NA	NA
WP_062820308.1|3487180_3487579_-	hypothetical protein	A0A1D8ETM0	Propionibacterium_phage	1.5e-21	44.7
WP_157773960.1|3487575_3487743_-	hypothetical protein	NA	NA	NA	NA
WP_062820309.1|3487754_3488144_-	hypothetical protein	A0A286QMU6	Streptococcus_phage	1.5e-07	33.9
WP_062820310.1|3488140_3488524_-	hypothetical protein	NA	NA	NA	NA
WP_062820311.1|3488523_3488745_-	hypothetical protein	NA	NA	NA	NA
WP_062820312.1|3488741_3489062_-	hypothetical protein	A0A1D8EX57	Mycobacterium_phage	9.7e-16	45.2