CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017812	Actinomyces tangfeifanii strain VUL4_3 chromosome, complete genome	4 crisprs	csa3,DEDDh,cas4,DinG,cas3	2	1	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017812_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017812_1

461499-461614

Orphan

Consensus_repeat	Method
CCGATGCCTGATCCTGAGCGGCAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017812_1

>merge|NZ_CP017812|1|461499-461614|CRISPRCasFinder
CCTCAGCCGATGCCTGAGCCGCAGCCGATGCCTGATCCTGAGCGGCAGCCGATGCCAACGCCGGAAGCAGAACCGACTCCTGAAGTGGAACCGATGCCTGATCCTGAGCCGCAGCC

>NZ_CP017812|1|1|461499-461614|CRISPRCasFinder
CCTCAGCCGATGCCTGAGCCGCAGCC	GATGCCTGATCCTGAGCGGCAGCCGATGCCAACGCCGGAAGCAGAACCGACTCCTGAAGTGGAA
CCGATGCCTGATCCTGAGCCGCAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017812.1\|WP_083378987.1\|471245_471611_-\|DUF4235-domain-containing-protein	unknown	unknown	gnl\|CDD\|379422
NZ_CP017812.1\|WP_071163636.1\|454233_454872_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|239344
NZ_CP017812.1\|WP_071163632.1\|448986_450264_-\|D-tagatose-bisphosphate-aldolase,-class-II,-non-catalytic-subunit	unknown	unknown	gnl\|CDD\|377955
NZ_CP017812.1\|WP_071164880.1\|474712_476461_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP017812.1\|WP_071163645.1\|471635_472607_+\|glutathione-S-transferase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|223512
NZ_CP017812.1\|WP_071163647.1\|476768_477509_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071163638.1\|459530_460043_+\|TM2-domain-containing-protein	unknown	unknown	gnl\|CDD\|377473
NZ_CP017812.1\|WP_071163642.1\|467347_468523_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_083379220.1\|454971_456252_-\|PLP-dependent-transferase	unknown	unknown	gnl\|CDD\|223699
NZ_CP017812.1\|WP_071163635.1\|452896_453178_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP017812.1\|WP_156981970.1\|465037_466549_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP017812.1\|WP_071163637.1\|456582_459297_+\|pyruvate,-phosphate-dikinase	unknown	unknown	gnl\|CDD\|236446
NZ_CP017812.1\|WP_071163634.1\|451372_452824_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
NZ_CP017812.1\|WP_083378983.1\|453278_453737_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP017812.1\|WP_071163640.1\|463324_464926_-\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|275380
NZ_CP017812.1\|WP_083379221.1\|468660_471018_-\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|223325
NZ_CP017812.1\|WP_170299693.1\|472679_473735_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213221
NZ_CP017812.1\|WP_071163641.1\|466754_467336_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|234753
NZ_CP017812.1\|WP_071163631.1\|447744_448860_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|131862
NZ_CP017812.1\|WP_071163633.1\|450587_451334_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|179510

Protein	Function_ID	Function_description	E-value
NZ_CP017812.1\|WP_083378987.1\|471245_471611_-\|DUF4235-domain-containing-protein	gnl\|CDD\|379422	pfam14019, DUF4235, Protein of unknown function (DUF4235). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 88 and 119 amino acids in length.	2.99793e-13
NZ_CP017812.1\|WP_071163636.1\|454233_454872_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|239344	cd03046, GST_N_GTT1_like, GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.	1.16978e-28
NZ_CP017812.1\|WP_071163632.1\|448986_450264_-\|D-tagatose-bisphosphate-aldolase,-class-II,-non-catalytic-subunit	gnl\|CDD\|377955	pfam08013, Tagatose_6_P_K, Tagatose 6 phosphate kinase. Proteins in this family are tagatose 6 phosphate kinases.	0
NZ_CP017812.1\|WP_071164880.1\|474712_476461_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	8.75211e-149
NZ_CP017812.1\|WP_071163645.1\|471635_472607_+\|glutathione-S-transferase-C-terminal-domain-containing-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.87395e-21
NZ_CP017812.1\|WP_071163638.1\|459530_460043_+\|TM2-domain-containing-protein	gnl\|CDD\|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	3.76905e-16
NZ_CP017812.1\|WP_083379220.1\|454971_456252_-\|PLP-dependent-transferase	gnl\|CDD\|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	2.59626e-150
NZ_CP017812.1\|WP_071163635.1\|452896_453178_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	8.89988e-25
NZ_CP017812.1\|WP_156981970.1\|465037_466549_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.30787e-51
NZ_CP017812.1\|WP_071163637.1\|456582_459297_+\|pyruvate,-phosphate-dikinase	gnl\|CDD\|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0
NZ_CP017812.1\|WP_071163634.1\|451372_452824_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	3.09893e-116
NZ_CP017812.1\|WP_083378983.1\|453278_453737_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	8.29541e-33
NZ_CP017812.1\|WP_071163640.1\|463324_464926_-\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	1.27991e-34
NZ_CP017812.1\|WP_083379221.1\|468660_471018_-\|(Fe-S)-binding-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	5.41243e-72
NZ_CP017812.1\|WP_170299693.1\|472679_473735_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213221	cd03254, ABCC_Glucan_exporter_like, ATP-binding cassette domain of glucan transporter and related proteins, subfamily C. Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virulence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	5.84814e-124
NZ_CP017812.1\|WP_071163641.1\|466754_467336_+\|dCTP-deaminase	gnl\|CDD\|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	4.99138e-90
NZ_CP017812.1\|WP_071163631.1\|447744_448860_-\|SIS-domain-containing-protein	gnl\|CDD\|131862	TIGR02815, agaS_fam, putative sugar isomerase, AgaS family. Some members of this protein family are found in regions associated with N-acetyl-galactosamine and galactosamine untilization and are suggested to be isomerases.	2.32443e-149
NZ_CP017812.1\|WP_071163633.1\|450587_451334_-\|SIS-domain-containing-protein	gnl\|CDD\|179510	PRK02947, PRK02947, sugar isomerase domain-containing protein.	1.71856e-100

>NZ_CP017812.1|WP_071163638.1|459530_460043_+|TM2-domain-containing-protein
MSEPYYPTNENAQGQNGAEAYTSMPQTDAPVQPYQAPGQNGYQQQYQAGGQYQQYQANGQAQYQQQGYQTPPGQAPYQQQTYPNGYAQQPYGQPMTPPRNKWIAVLLCFFLGTLGIHNFYMGYTGRGVAQLLLTLTVVGALISGPWVFIEFIILLISSNYTDAQGRPLEN
>NZ_CP017812.1|WP_071163637.1|456582_459297_+|pyruvate,-phosphate-dikinase
MTKFVYNFHEGDKDMKDLLGGKGANLAEMTKLGLPVPPGFTITTDACRSYLNHGQVPDELHTEVTQALRDVEDTLGRQLGDAEDPLLVSVRSGAKFSMPGMMETVLNIGLNDKSVLGLAKVSGDERFAWDSYRRLIQMFGKTVLDVDGDRFSDALEDLKAERKVSADVDLTAEDLKGLVETFKQIVLDATGEAFPQDPRTQMDMAIEAVFRSWNTERAHIYRRRERIPHDLGTAVNICTMVFGNMGETSGTGVCFTRDPSSGDAGVYGDYLMNAQGEDVVAGIRNTLPLAALKEHNRPVYDELRGIMRKLETHYKDLCDIEFTIERGKLWMLQTRVGKRTAGAAFRVASQLIDEKLITPNEALERVTGAQLTQLMFPQFDVEASRNLLTRAMAASPGAAVGQIAFDNAAAIKMANAGNPVILVRRETNPEDLPGMVAAEGVLTARGGKTSHAAVVARGMGKTCVCGAEELDVDLKARTLRVGDKVFGEGHVISIDGTTGEVFDGKVAVVDSPVTTYLSHGLEAGLAAAEGDEDMQDLVRSVDRLLTHADSVRRLEVRTNADTPEDTERALGYGAQGIGLCRTEHMFLGERRALIERVILAEEASQERSDAMDALVPLQKGDFLQMLKLMDGKPMTVRLIDPPLHEFLPDLTDLEVKVAVADALHKSGEEVEADKRMLSAVRKMHEANPMLGLRGVRLGLYLPGLFALQMRALVEAAADLKAEGGNPLPEIMVPLVGSIRELQLIREEGEAIIAEVSERTGVELDIPIGCMVELPRAALTAEDLALEADFFSFGTNDLTQTTWGFSRDDVEGTFFGLYTEEGVFGVSPFESIDVHGVGRLVKLGVKKGRSAKPGMKMGICGEHGGDPDSIHFFDRIGLNYVSCSPFRVPVARLEAGRAAVMNGER
>NZ_CP017812.1|WP_083379220.1|454971_456252_-|PLP-dependent-transferase
MDNLPTTPKAPANAKESAHLGERSFATRCVATTPFDPTGAVVPAIYLASTYAHPIPGACPPPAPMPCGTNEEGGHSYQRWSNPTRAAVEIAVASLEDAKHAYAFATGMAAISAVFSTVKAGQRVLLCSSIYGGTFQYISNFFPARDIKYDLIDDVNALRAEDVPADTAMIYIESPTNPRLRVVDIAHAAEVAHQVGAKLAIDNTFQTAYLQRPFELGADYVIYSATKYLAGHGDVLAGLVLANDEELAEQVRLAQVALGAPLSPFDSYSVLRGLKTLVVRMDRQLENAERIREFLLAHPSVTAVHYPGSENAKEAEIQAKQSQGAGSVLSFEIADDIHLPTFVAALDIIGYAVSLGGVETLLCHPASMTHATMNDQELAAAGISQRLLRLAVGIEDASDLLAELQRAFQVSKGAAERCLDNSNSES
>NZ_CP017812.1|WP_071163636.1|454233_454872_-|glutathione-S-transferase-family-protein
MSLVLHHLNDSRSFRIAWALTELGADFELVKHQRGADLLAPDSLKQVHPLGKSPVLEDDGKQYIESQCILEHLSETHDGRLSAKQDDPRMWLTFTESSLMPMLVMGLVLKTAAKQAPKILQPVFKPFVKGISTAFTGKNAKADLEFLNGYLTKHNFLSDDDQFGIADIQMEFAIYSAEGAGFNLGEYPAIRRWLTELHERPAYQQALSRAGR
>NZ_CP017812.1|WP_083378983.1|453278_453737_-|PTS-sugar-transporter-subunit-IIA
MDSSFSGIVTPQRVHAGATVDDWRGAVQVVGGMLAATGACTENYVAAMEQAVIDLGPYMVVAPGVAMPHARPEAGVLEPGIAVATLTEPVNFGHKKNDPVSLVIGFAAINKDAHLASLQKIVALLQDQERLAKVKAATTNEELYEALTYQNN
>NZ_CP017812.1|WP_071163635.1|452896_453178_-|PTS-sugar-transporter-subunit-IIB
MLNIVTVCGMGFGTSLMLAMQVRDIMSENGIDAKVDPVDLGSFKTMPADMVVAPRDMENQVTEGPAKVVVLIDNLVDKDEVSSKVLEAVKPLL
>NZ_CP017812.1|WP_071163634.1|451372_452824_-|PTS-ascorbate-transporter-subunit-IIC
MAVLNVLLALVQVPAIIIGFIALLGLLLQKKDTSAVVTGTVKTILSVLIITGGITVLISALGPIQGMFELALPKEKVTTFVTFDEAVVGAVQSANEANLGMLIGLTLLFGYITHLVISRITKHRYVYLTGHMIWVHAGGFAILFHSLGLGPVATVVIASLVDGAYMTFAPALAQPFMRKITGRDDIGFAHGQTTLNVAFGWIAKFIGNPKKSTEEINVPKSLNFFRDVAVSTTAVMLVVTYIAAIGAVITKGVDFLQNGNGADVPGITGGQNWVIFSLVQALTFTAGMLIMLYGVRMLIAEIVPAFQGVGMKMIPGAKPALDVPVIFPFAPNALVIGLIFGFIGQIAGMGVLAAMGWPMPIPSVIVAFFACGAGAIFANAMGGARGAIFAAFSWGFFGWLLISAAYHFQSFGNLDALGATALGFTVPDLVIPGLIVGGLKALAGPWVAAIVPVVAVLATVALTFNPSKELPKWEKPADKAATK
>NZ_CP017812.1|WP_071163633.1|450587_451334_-|SIS-domain-containing-protein
MSEMTNTYLNGAIKLLERLRDEEAPKLEEAAKAISEVLRNGGNLFAFGCSHSSLPVQDIVYRAGGLMLVNPLYGPGIAALDTRPTTLGSDMEKLPGYAKAILDNSPLKKGDALIVVSVSGRNAVPIELAQLAQERGILVVAVTSHEYTDSVTSRHESGKKMKDFADIVLDNKVDAGDAILSLPEVPQKFCALSGVTSTALLHNLVGLIIEDMVANGVTPPVFLAANLDGGKEWNAKHLAENKDRIFYL
>NZ_CP017812.1|WP_071163632.1|448986_450264_-|D-tagatose-bisphosphate-aldolase,-class-II,-non-catalytic-subunit
MNYPEMIAAHKDGQTVGIYSICSADPTVLRASLLQAKADDTSVLIEATSNQVDQFGGYTGMKPPQFRELVFQLADEIGLPRERVILGGDHLGPNTWQKQEPAEAMEKAVELVRAYVAAGFTKIHLDCSFSCKGDPYPITDEIAAERAAMMLVAAEEEAEKAGTADQIRYVIGTEVPVPGGHQEELGEITPTSPEAARTTLAKHREAFDQVGLTNVWPKISALVVQPAVEFDHLKVVDYKTEGTKELRNVLDDEPTLVFEAHSTDYQTTENLSQLVRDHWAILKVGPGLTFNLREGLFALAHIEDELIPEGQRSNLRQVIEDRMVEDPSRWEVYYTGTEDEQRIARRYSYSDRMRYYWPDEVIKEARAKLMSNLDSVDIPLPLLSQYLPLQYERVREGELENRADALLMDRVRDAIRPYATACHKQ
>NZ_CP017812.1|WP_071163631.1|447744_448860_-|SIS-domain-containing-protein
MGNYQEAVTYTEVCDQYPKWRVLAQDLKDNAKKHEAFLAPLLAKKDLRIVLTGAGTSAFVGETAAPAIARATGRRVEVVATTTIVSNPRESFAQDVPTLVVSFARSGNSPESLAATKLADQCLSEVYHLVLTCAPEGELAVGRKDKDNSLVVLMPEGSNDKGFAMTSSFTCMLLSCLVLLGAGEADLLNRVADAAEYVVNEKQEDIKALADKLPKRVVYLGSGSLHGLAHEAGLKFLELTAGDHVSFYESSMGFRHGPKAVIDETTQCFVFVSSDPYTRQYDLDIVNELRGNLGTDAVLALAGKELDLENAWVWPGLADVPDAFVAAVHVIVAQFMGVFTSAALDKNVDNPFPAGDVNRVVQGVIIHELED
>NZ_CP017812.1|WP_071163640.1|463324_464926_-|leucine-rich-repeat-domain-containing-protein
MKTPLTAITVLSAAAIALTPLPLTSTPVAEAAYRPRPTLVSAPKVGGKFVDVPKNMLFSGEMAWLANARISTGWEGKRGREYRPLNQIERQAMAAFLYRLAGMDRSGYRPPKRPTFKDVPRGSQFYKQVEWMASTGITTGWKRGKDRYFGPHGAVNRDAMAAFLARFVKKYPSRVSPAIVALGQPGKQGSGRVFRDVPAKMQFSAEMEWLRKTEVSTGWKRGKNRFYRPLEPIRRDAMAAFLYRLKFNRFAEPTAAEMADARKTVTKSCWVAPNMSDFWNRKNLECEFTRYNYAINKAANERIRKEKLQEFSMYVGNPRDIIDEILIFPTIKSFGIMGTKATSVPNFSRMPNVTHLILKGNQLRSLPNFSHLPKLTHLNVNENQLRSLPNFTHLPKLYNLEAERNQLSSVPNFSKIPQLSYLEVSSNKLKALPDFRYARELFTLKVESNQLTALPDFRSTNLRVIHADKNRISKVPNWKNLRNLQSLYLKNNQIKSMPNFYYMDELKYVHLQNNPLKKCPTFPDSLRRIKVSC
>NZ_CP017812.1|WP_156981970.1|465037_466549_-|MFS-transporter
MSQPAPIGAASVRGAKENSAVKDWNVDPWKAFYVIMAGGFMTLLDVSIVNVALPSITAHLQATSSQLQWIVAIYSLAFGVMLVPAGRFGDLFGRRTMFLVGIGGFGLASILCGLAPSANFLIGARLIQGAFAAVINPQVAGLIQQMFTGADRGRAYGYNGAAIGVATALGPVLGGVIVSALPGQFGWRTIFLINVPIALVVIPMAIKLLPPPQRQDAKIRLDLVGIILMTAITLLLMLPLIIATQHASWSGAPWWMIGAALAVWVLFMLWELWRDGQGGTVILPRSLMRTPSFTLGTVIITVYFVGFSGFFVITSLYLQDGLGLPAWQAGMMLLPFALGGTVGAAGSGRYLHHYGRLVVVVGLACSLAGMSLGNLLISLDPTGNHVWTLIFAFLLAGFGNGCTIAPNQALTLADVPVASTSTAAALLQSTQRIGTTLSIAVLTLVFFISLPLDLRGQPASSAGEILTFSGAFSNALHVTEVTCSLALMMALVDWYRRRHASVQ
>NZ_CP017812.1|WP_071163641.1|466754_467336_+|dCTP-deaminase
MLLSDGDLTAELSAGRIGLDPLDLSLVQPASIDVRLDRYFRLFDNHKYAVIDPKADQSDLTHMVDAGESGPFVLHPGEFVLGATLETVTLPDDIAARLEGKSSLGRLGLLTHSTAGFIDPGFSGQVTLELSNTATMPILLYPGMKIGQLCFFRLSAPAQKPYGQGATGSRYQGQRGPTPSRSHLNFTQVPVKK
>NZ_CP017812.1|WP_071163642.1|467347_468523_+|hypothetical-protein
MPIDLSRVLDPSLAAALKPAFEGASFRFHEDGTAYADRAKDTYVVATTWLAGHQLPPELMGGHLLFFPSDVSSSEVEALAVSLWEEAGWLVPGVLGLTGEATLSGPWTLGKGQQAELNLPNSAAVVYSVQCRREREVPPPDAPVDFLDPWFKHVLPAGDEYLLVANLVTLAARLGGGLRSDMGHVAEPDPDAAVNLTVYSPNWLGGKDLLAELVPMFPGMRPFTAPIVPAEAVPGVLTGDVPLSRVAMKAIESAGIETEELNELMSQAQKYDLAALSEETNLKSTPEKPHEHEPFCLQLDLKPGAVLIEGHEAEYLPPVLRWEEWAEGPVFEYLLRWEPSDPIRGWDRRVPRALRIERVHATSTIESLAAELVAIVGGDAVDDEGFLVAFD
>NZ_CP017812.1|WP_083379221.1|468660_471018_-|(Fe-S)-binding-protein
MVMLSFPILFLTLVSSYFQIVRPGFSLFLLGHFPPYEWLVEFFALACLLGILALFVVRARNGGALPWRRAEVTRQQAEAELANRDGSATSLPRRFLGSTKWQAVFVEAVVLLVAIAVLALRVLEYWWAQLPAKAQDFNAATAWAEGANYLTNAAESSTSWWHHPISGPLATLLASASPSFDAKALSVAIALTALAKILTSMIWMMVVGAQTTMGVAWHRFTALVNVFARRDPKGGKALGALEPIRMQGEPLTAETLEDLPEDARLGVETIHDFTWKGLLDFTSCTECGRCQELCPAWATGKPLSPKLFTLALRDHHASATAFAKAADQLLAERPELNDRFGTDEGSGTRLWPLADMLRPVDSQSTEDAALAGSNTEGSTESAAGQAATGAKDAAVAGQVSPLLPEEALALDSNLPLVAHTGDVLAALQAGGAAPDLETGVALQTAPLVGDVIVPEALWACTTCGACVEQCPVDIEHIDHIVDLRRNQVLMESAFPKELAGVFRKMESKGNPYGKPARKRMEWAKNLDFEIPEIGVDVEDATEVDYLLWVGCAGSFDDKAMKTTAAIAELLHLAEVSFGVLGQNESCTGDPARRAGNEVLFQMLAAANVEMLNEVKATKIIVSCAHCFNTIGQEYPQLGGKYEVLHHTQVLNRLVREGHLRPVPPSADEAQKVTYHDPCYLGRHNGIYSPPRELLGSVVGSENLVEMPRHADRAMCCGGGGARAWTEESTGVRIASARSAEAEETGATLIATACPFCTQMLDSASPKAQVQDVALSLLDSVKRGQN
>NZ_CP017812.1|WP_083378987.1|471245_471611_-|DUF4235-domain-containing-protein
MSIIVQDLVKHGKLARELFSLRVAPCRPRILEDQMDIAWKVINGVALAGAALVANTVVKSGWKALTGNTPPAPGDEEATARLAEVLIFGALSGLVMAAARRTAVRSANKWYGGSKFNQLEV
>NZ_CP017812.1|WP_071163645.1|471635_472607_+|glutathione-S-transferase-C-terminal-domain-containing-protein
MTVPNRRFAAHAATGLEEIPVVAGRYRLVTYVGCPWCRRVAIARRLLGLEDAISLSMAPKAGPDGFEFTSEKWDFDPDLQVRTTRELYRRQPDWQPGESTSVPVLVDEADPSVRGRIVARESGDLLFDLATAWRDLQAEDAPQLYPEGANAEDEDRAVADARSRDYQASDLPELAEKASQTELGMWFDQLLARPFGTVLHSDDEEAKREAQGKVVAALNALEQHLAEVSEQGPWLLGEKVSAWDVRVFAHLVSLAAWHSREAYSQALAKAPGEDEGARKAWAKQQAAKAPAPLSDWPHLNNYYQGLAADPRWLTDEEKQLLHL
>NZ_CP017812.1|WP_170299693.1|472679_473735_-|ATP-binding-cassette-domain-containing-protein
MTLGDVQAFIQYSRQFTQPLTTLASMANMLQSGASSAERVFEFLDAPELTADTRDEQARTEGDQALRDAGIINERGQVLAAQPTGGTEGGQPASANEQQVQNGKVVFRDVNFSYVPGKPIITGLNLSVQPGQTVAIVGPTGAGKTTLVNLLMRFYEIDSGAIFVDGINTLDMTRDELRSRIGMVLQDTWLFTGTIMENLSFGKVGATEEEVIAAAKATSVDRIIRALPDGYETHLDDEGGGISNGERQLLTIARAFLSDPEILILDEATSSVDTRTEVLVQQAMGKLRSGRTSFVIAHRLSTIRDADLIVVMENGNVVEQGTHTELLARNGAYRHLHDAQLAVGDSEEVTE
>NZ_CP017812.1|WP_071164880.1|474712_476461_-|ABC-transporter-ATP-binding-protein
MLTKILRRYAKPYAWLIAAVIIFQIAQTIASLWLPSLNADIIDKGVVTGDTGKIMHYGWIMIGMATLQVVANVFALYFGSKAGTGVGQDLRHDTFERVQSFSRTEMHHFEAASLITRATNDIRQIQMVTMMGLAIMVMSPIMSIGGVIMAIRQDAGLSLLLVVAVPALGAVMGILMYKLQPQFRLSQKRTDAINSVLREQLTGTRVIRAFVRQDAERERFDTANVNLRDTNLEIGKLFSFMFPAINLIVGFSSVGVIWFGAIRIDSGAMEVGAMVAFLNYLMQIFIAVMMMSFMFMMIPRAQVSAERVQAVLDTDPVIASPKTGRKPAENERLTFSLVDATVQYPGAEMPVLADINATLTPGTTTAVIGSTGSGKSTLAALLPRLIDTSRGQIQINGEDIREWDLPALRRRIAYVPQTSYLFSGTIASAVAAVPVDQVTDEVRARVEAALEIAQATEFVSRLSEGVDSRVDTGGKNFSGGQRQRLTIARAVYRHADLFVFDDSFSALDYATEARLRQALPQVTGEAAVLVVAQRVSSIVNADQILVLDGGQVVGSGTHEELLANCETYQEIVSSQLDPEEAA
>NZ_CP017812.1|WP_071163647.1|476768_477509_-|hypothetical-protein
MSKSKFSVLLTAALVAVSMTGCSLTSAGPQVVKVEELSSPEDTVELTPAPTTTPPVTNPSIPGAASTEPTGTPAPGTPGQNAEGGNQPGAGTPGDANQGNNGQSGDGSAKSGEGEGISGASNQSDNAGNDNQPPVDTELGNARVGDDKNENQVLHLDLYLHPDSKPGQDIAAGRAPLSFRHEIEDLAKNFECHSLNFSVAPMPMATWEVECPSNVTMMAQFLAKLNLLPQVDRAEESLTLDTQGRG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP017812_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017812_2

1357266-1357330

Orphan

Consensus_repeat	Method
GGTTCTGGCTTCGGCTCTGGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017812_2

>merge|NZ_CP017812|2|1357266-1357330|CRISPRCasFinder
GCCTCTGGCTGAGGTTCTGGCTTCGGCTCTGGCTTTGGTTCCGGCTTGGGCTCTGGTTCTGGCTT

>NZ_CP017812|2|2|1357266-1357330|CRISPRCasFinder
GCCTCTGGCTGAGGTTCTGGCTT	CGGCTCTGGCTTTGGTTCC
GGCTTGGGCTCTGGTTCTGGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017812.1\|WP_071164303.1\|1355380_1356307_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP017812.1\|WP_071164312.1\|1365863_1367396_-\|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	unknown	unknown	gnl\|CDD\|179297
NZ_CP017812.1\|WP_071164299.1\|1349754_1350495_-\|SseB-family-protein	unknown	unknown	gnl\|CDD\|377787
NZ_CP017812.1\|WP_071164313.1\|1367392_1368475_-\|phospho-N-acetylmuramoyl-pentapeptide--transferase	unknown	unknown	gnl\|CDD\|234638
NZ_CP017812.1\|WP_071164297.1\|1348602_1348797_-\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NZ_CP017812.1\|WP_071164300.1\|1350504_1351260_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071164310.1\|1363495_1364593_-\|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase	unknown	unknown	gnl\|CDD\|234825
NZ_CP017812.1\|WP_071164306.1\|1358069_1358495_-\|cell-division-protein-SepF	unknown	unknown	gnl\|CDD\|377370
NZ_CP017812.1\|WP_170299671.1\|1364601_1365837_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|274232
NZ_CP017812.1\|WP_083379097.1\|1356299_1356848_-\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|237810
NZ_CP017812.1\|WP_083379099.1\|1359298_1360726_-\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|236468
NZ_CP017812.1\|WP_083379096.1\|1348864_1349488_-\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NZ_CP017812.1\|WP_071164296.1\|1348188_1348572_-\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
NZ_CP017812.1\|WP_170299670.1\|1360867_1362019_-\|FtsQ-type-POTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|135428
NZ_CP017812.1\|WP_071164307.1\|1358583_1359306_-\|laccase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376831
NZ_CP017812.1\|WP_071164305.1\|1357770_1358064_-\|YggT-family-protein	unknown	unknown	gnl\|CDD\|376765
NZ_CP017812.1\|WP_071164301.1\|1351450_1351687_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|379097
NZ_CP017812.1\|WP_071164309.1\|1362139_1363495_-\|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl\|CDD\|234757
NZ_CP017812.1\|WP_071164947.1\|1347228_1348101_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349968
NZ_CP017812.1\|WP_071164302.1\|1351754_1355339_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554

Protein	Function_ID	Function_description	E-value
NZ_CP017812.1\|WP_071164303.1\|1355380_1356307_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	8.7459e-101
NZ_CP017812.1\|WP_071164312.1\|1365863_1367396_-\|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	gnl\|CDD\|179297	PRK01438, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.	4.50417e-166
NZ_CP017812.1\|WP_071164299.1\|1349754_1350495_-\|SseB-family-protein	gnl\|CDD\|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	1.35698e-05
NZ_CP017812.1\|WP_071164297.1\|1348602_1348797_-\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	2.32427e-18
NZ_CP017812.1\|WP_071164306.1\|1358069_1358495_-\|cell-division-protein-SepF	gnl\|CDD\|377370	pfam04472, SepF, Cell division protein SepF. SepF accumulates at the cell division site in an FtsZ-dependent manner and is required for proper septum formation. Mutants are viable but the formation of the septum is much slower and occurs with a very abnormal morphology. This family also includes archaeal related proteins of unknown function.	5.01369e-17
NZ_CP017812.1\|WP_071164310.1\|1363495_1364593_-\|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase	gnl\|CDD\|234825	PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional.	7.1416e-136
NZ_CP017812.1\|WP_071164313.1\|1367392_1368475_-\|phospho-N-acetylmuramoyl-pentapeptide--transferase	gnl\|CDD\|234638	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional.	5.04695e-146
NZ_CP017812.1\|WP_170299671.1\|1364601_1365837_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|274232	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW. This family consists of FtsW, an integral membrane protein with ten transmembrane segments. In general, it is one of two paralogs involved in peptidoglycan biosynthesis, the other being RodA, and is essential for cell division. All members of the seed alignment for this model are encoded in operons for the biosynthesis of UDP-N-acetylmuramoyl-pentapeptide, a precursor of murein (peptidoglycan). The FtsW designation is not used in endospore-forming bacterial (e.g. Bacillus subtilis), where the member of this family is designated SpoVE and three or more RodA/FtsW/SpoVE family paralogs are present. SpoVE acts in spore cortex formation and is dispensible for growth. Biological rolls for FtsW in cell division include recruitment of penicillin-binding protein 3 to the division site. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	1.52314e-81
NZ_CP017812.1\|WP_083379097.1\|1356299_1356848_-\|signal-peptidase-II	gnl\|CDD\|237810	PRK14764, PRK14764, lipoprotein signal peptidase; Provisional.	7.79958e-45
NZ_CP017812.1\|WP_083379099.1\|1359298_1360726_-\|cell-division-protein-FtsZ	gnl\|CDD\|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NZ_CP017812.1\|WP_083379096.1\|1348864_1349488_-\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	6.32622e-84
NZ_CP017812.1\|WP_071164305.1\|1357770_1358064_-\|YggT-family-protein	gnl\|CDD\|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	0.0021918
NZ_CP017812.1\|WP_170299670.1\|1360867_1362019_-\|FtsQ-type-POTRA-domain-containing-protein	gnl\|CDD\|135428	PRK05529, PRK05529, cell division protein FtsQ; Provisional.	7.43716e-22
NZ_CP017812.1\|WP_071164296.1\|1348188_1348572_-\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	5.38844e-58
NZ_CP017812.1\|WP_071164307.1\|1358583_1359306_-\|laccase-domain-containing-protein	gnl\|CDD\|376831	pfam02578, Cu-oxidase_4, Multi-copper polyphenol oxidoreductase laccase. Laccases are multi-copper oxidoreductases able to oxidize a wide variety of phenolic and non-phenolic compounds and are widely distributed among both prokaryotes and eukaryotes. There are two main active catalytic sites with conserved histidines that are capable of binding four copper atoms.	8.33537e-63
NZ_CP017812.1\|WP_071164301.1\|1351450_1351687_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|379097	pfam13275, S4_2, S4 domain. The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4.	2.41245e-16
NZ_CP017812.1\|WP_071164309.1\|1362139_1363495_-\|UDP-N-acetylmuramate--L-alanine-ligase	gnl\|CDD\|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	1.39592e-180
NZ_CP017812.1\|WP_071164947.1\|1347228_1348101_-\|RNA-methyltransferase	gnl\|CDD\|349968	cd18095, SpoU-like_rRNA-MTase, SAM-dependent rRNA methylase related to SpoU-TrmH. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.45033e-59
NZ_CP017812.1\|WP_071164302.1\|1351754_1355339_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0

>NZ_CP017812.1|WP_083379097.1|1356299_1356848_-|signal-peptidase-II
MPRKRLTSTFWGIFIVATLVDQLSKVWALNALGQGQVVKLIGNYFTLELIHNPGAAFSLGTGKAWIFSLISLAVLGAIFYYLPKIVSSAWIITLGFFAAGALGNLIDRLFRAPGWGNGHVVDFLNYHGFFIGNIADIYIFIGAVAIIAFTLFGVEPVAKAQAATTNTAAPKTVATKEELDHE
>NZ_CP017812.1|WP_071164303.1|1355380_1356307_-|RluA-family-pseudouridine-synthase
MSDPELIEIDCLIPSHETRRLDLFLAEELDLPRAIVTKAITEAEILVNDNPVKKSYRLRGNESVTGKIALPGQLQAIPKEAELPVVYQDENLAVVNKPVGMAAHPAKGWEGPTVLEALLAQGMTINTPGDQWRRGIVHRLDAATTGLLVVAKTPQAYESLQADFAARRVHKIYHALIQGHLPQAAGTIIAPIGRSQSKDYKMAVRPDGREAITHYQEIQKFPQTTLLEIGLETGRTHQIRVHLASLGHPCVGDSTYGANPKLSAALGLDRQWLHASKLSFKHPVTGENCSFSADFAPDLEAALALAAK
>NZ_CP017812.1|WP_071164302.1|1351754_1355339_-|DNA-polymerase-III-subunit-alpha
MATSDFVHLHCHTDFSMLDGAARIKPMVQRAKDIGQKAVAITDHGYLFGAFEFYQACKDVGIKPIVGLEAYVTPGTSRHDRTRHTWGTTAQQEAGDDVSARGSYTHMTLLARTTAGMHNLFRLGSRASLEGQWGKWPRADRQLIETYADGLIGTTGCPSGAVQTRLRLGQIEEAYREAGELQDIFGKDYFFVELMDHGLEIERRVQNELLELSRKLGAPLLATNDSHYVNSDERDVQDAMLCISTGSRLSDPDRFRFDGSDYYIRTAEEMRETFRDLPEACDNTLLVADMCEIEFKTVKEGANFMPRFPLPPGEDEHSWFVAEVERGLNYRFPNGIPDEVRKQAEYEVGIITQMGFPGYFLVVADYIQWAKDQGIRVGPGRGSGAGSMVAYAMRITDLNPLEHGLLFERFLNPERVSMPDFDVDFDERRRGEVIDYVTKKYGADKVAQVVTYGKIKTKQALKDSARVLGYEYQMGERLTKAMPPSVMGKDITVKGIFDPTDKRYAEAEEFRKLHAQDPDAQQVVELAKGLEGLTRQWGVHACAVIMSSETLTDIIPMMMRPQDEAVITQFEYPACETLGLLKMDFLGLRNLTVISDALQNIIDNGKDPVDLEHLTLDDKATYELLSTGETLGVFQMDGGGMRDLLRLMRPDNFEDISAVGALYRPGPMGADSHTNYALRKNGVQQIEAIHPALAEPLKDILGETYGLIVYQEQVMAIAQKLAGYSLGQADLLRRAMGKKKKEILDKEYVPFHDGMIERGYPEDAIKTLWDILVPFSNYAFNKAHSAAYGVVSYWTAFLKANYPVEYMAALLTSQKDNKDKLSVYLAECRRMQIKVLPPDVNESVGVFRAVGDDIRFGMAAIRNVGQHVVEGIIEAREEQGAFTSFQDFLSKVPLQVCSKRTIDSLIKSGAFDSISDSRRALVACHEEAVDSVTSQKRNEAVGQFDLFADFGAEEEVGFTFTVPNLPEWERMVKLQFEREMLGLYVSDHPLNGMERRLSREQDIQIANVKAEDGPAHQETVKIAGLITDVTRRTSRNGMLWATVTLEDLTGAMEVTFFPRQYETFNPFLKQDTVVSVTGQVSREEGRLTLKVSSLTTIEGTDSDERPLTLELRSTDCTRDKMEQLLGVLQNHPGAAPVRLKIRDGLKVTTLELDQTTVDVSEALISDLKVLLGTRAIPQSASATPPPARPPFRGR
>NZ_CP017812.1|WP_071164301.1|1351450_1351687_+|RNA-binding-S4-domain-containing-protein
MEIIPVPVRGTIKLGQFLKLANMVDQGAEATAAIAAGEIMVDGQVVTTRGSKLSLGQVVSWTEDDNYGWQVAEEDSEF
>NZ_CP017812.1|WP_071164300.1|1350504_1351260_-|hypothetical-protein
MSDRDFEKEFEQLMGAAAPELEAELGAELAGEGTLGSSTSADPKDRTDSSNSQEEILLSEDGIPMFAADPNAQVEEIRPIEDGSRRVGLLLTEVANWKALDHLLRAEEIKGRALGIPTGAGVWVDITSVEDELDALLGSNRPLAPELEEAAKALSKVLGRTVVALQSWLTLTADEEGYVAGQIAAKRYTRGGEGETISGGLVIAGMDPAVEDILLGRTDPLTHQHRGPVRYIAKSWKDFPKSLFNRGQNQE
>NZ_CP017812.1|WP_071164299.1|1349754_1350495_-|SseB-family-protein
MTNTSSQPQSNGKQPELTEAQRAKLAQRLAQRDGGNDLGEINPEVAQALMIPDEQARLSALGKALVGTRLLVPVQPHGHDESENSDISQLLRQQSVGGVKAVVAYTDLKTMQLDFPKLRPVPLPVDKVALAAIATKLPLALNGRKHLFLPYPALEALATGDSWLAPWDDEELRSYFKALLARYSALTGYRLMPSPKGTDLELFVDITQGDKFTNQLQLFVGELQKNAKIAARCGLLEVKPRPVSPM
>NZ_CP017812.1|WP_083379096.1|1348864_1349488_-|translation-initiation-factor-IF-3
MTEPRINERIRVPEVRLVGPGGEQVGVVRVEDALRLAQEADLDLVEVAPDARPPVAKLMDYGKFKYENAQKERAARRNQANTQMKEVQFRLKIDDHDFETKTGHVARWLHGGDKVKVVIVFRGREQSRPEMGVRLLERVAEAVAEQGTVEARPRIDGRRMNMVLAPVRKKADAVNEMRKRREAERDERRARKAERSERIAERAAKSE
>NZ_CP017812.1|WP_071164297.1|1348602_1348797_-|50S-ribosomal-protein-L35
MPKNKTHSGMKKRVRTTGSGKLMRERAGKRHLLEHKSSRRTRRLSRDQVVAPADVKKIKKLLGK
>NZ_CP017812.1|WP_071164296.1|1348188_1348572_-|50S-ribosomal-protein-L20
MARVKRAVNAAKKRRVVLERASGYRGQRSRLYRKAKEQVTHSMVYSYRDRKARKNEFRRLWIARINAACRAEGMTYNRFIQGLNLAGIEVDRRMMAELAVNEPAAFSALVAAAKAALPADVNAPKEA
>NZ_CP017812.1|WP_071164947.1|1347228_1348101_-|RNA-methyltransferase
MSLFSDRVNLLDNPNAPRIGFAARLANKSVRTKYQLVLVEGPQAMRELLLHAPMAVKDIYVDVNLAGGPLKELVSLARQVTDFVHPCTPETFRAITRDGQGICAVVNKALLPMAEVDEVSLPEAGMVVILARIQDPGNVGTMIRLADAFGAQAVYLTAGTVDPTSPKVIRAAAGSTFHLPIITGQFSEIVSPLKKSGYQVFGTSGNASFTLDELLDRSQCSPSELSRPNLVESVAWVLGNEAKGMSDDEQELCDQLVSIPMYGLAESLNVASAAAILTSSTARIQARNQV
>NZ_CP017812.1|WP_071164305.1|1357770_1358064_-|YggT-family-protein
MQTIGSVLLFLLWLYTLVIIATFVLDIIRMFNPEWVPGAFMSTLGNICYALTDPPLNALKKIVPPVRFGNISLDLGMIILLVIVGLLQRLVVAFMLS
>NZ_CP017812.1|WP_071164306.1|1358069_1358495_-|cell-division-protein-SepF
MANMFMRAIGKMNLAEPEFEDQELEYEDGDQYAEYEEGGELVQLHSEDMVDYSRIMTVRPRTYGDSDTLAIADSLIAGVPVIVNISDLPVSDQSSTLDFISGVVYALKAHFERVTGKVYLLSPQVVSIVDGEGQPLAREPW
>NZ_CP017812.1|WP_071164307.1|1358583_1359306_-|laccase-domain-containing-protein
MTEFQLCGHRAAFTNREGGTSAILTTANDPAYGVFNLGDHVGDSPQRVQANREALEDWAQVPIAWMNQVHGDHIAVFAPPHAPTQTPVTADALVANGYAAAVMVADCLPILLASWDHQWVAAIHAGRKGCELDIVTKCANKIRSLAPGRLVAAIGPAICARHYEVDQQTYKNFVSRWPQGKAQTPQGTPALDLRAVVKAQLAQAQIEVAYDFDICTYRDAKSYSYRRDGVTGRFCGIIVS
>NZ_CP017812.1|WP_083379099.1|1359298_1360726_-|cell-division-protein-FtsZ
MTDQLDFGGYNDPRGGVTAVSNAVIKVVGVGGGGGNVVNRMINAGVTGVEYIAVNTDAQAMMLTEADVKIDIGRELTRGLGAGADPTVGRKSAEEHIDEIRQALTGADMVFVTAGEGGGTGTGAAPIVAGISRELEALTVGVVTRPFSFEGKRRAKQASAGIEELRKNVDTLIVIPNDRLLESSDQNLSMADAFRQADEVLKAGVQGITDLITTAGEINVDFADVKSVMKDAGSALMGIGEATGENRVMAATEQAIASPLLEARINGAIGVLLFFQGASDLGIHEITRAAQMVQEQVHEEANIIFGNVIDDSLGDVVRVTVIAAGFEEPQAEANSARSMPTAKPAAEAAPVAKPVAAEPEPVVAPPARPAGVPAAGLNESDPYGERSMGTLPNADLSRSRHRSPVSAPSRLNNSEVPPAPAPAAAPEPRYEERSDADLFAPADGLGTASLRRPRIFDETPNDEPDIPYFLRNRND
>NZ_CP017812.1|WP_170299670.1|1360867_1362019_-|FtsQ-type-POTRA-domain-containing-protein
MNRSASKKPVADMGPTVSDNFRPAEEKTPKSSQNLAALSRSWWAKGKTLLPKWGKAKTEPAVENLAPEVAPKPVRQTVKVVPTPLVEDQVSETVSSENQPSDLAPLAPTPPAGSDLAPAQKNDQAIIAPDLFASRGKVLSAPADLTARIAEKARAKRRQWMFYLLGALATIGLIAGLVWALLFSTLISLNSQSVIVEGKVAPAQITQLRAEMERFNRRPLILLSTKEVEDQISQLPWVSSATFEKDLPSSGTLTVSERQPVAIVMQKEKRIPIDNDGVLLEYLPGKDLPLPLLEVKTKSEDDRERTKLAALAVLSELPPPLREKVRLVRALSPTNIQFELDNKVLVKWGDRDNTALKAKVLEVMLQRPAKVYDLTTPTAPVTN
>NZ_CP017812.1|WP_071164309.1|1362139_1363495_-|UDP-N-acetylmuramate--L-alanine-ligase
MTKFHFIGIGGVGMNPVARLLAARGMEVTGSDGADSPVLSQLAEVGIKTYVGHRANQVPEDAIVVVSSAIRENNPELAQTRKNGQKVIHRSQALALAASGMRFVAVAGAHGKTTTSGMISVALSAAGLDPSFAVGSVVKGFDSGAHLGQSDIFVAEADESDGSFLNYQPTIEVITGIEPDHLDFYGDFKSVKTAFSDFAQLLPADGTAVIYQGNEASSALAKQLHDHCQVITYGSDEADVNFTNRVVEGNHQEFEITGSLGQAKVVLEVGGVHNALNALAAWIVARQLGVEAQEAADALGKFSGTARRFDFKGEVNEIRVFDDYAHHPSEVKMAVAQAQSVVKENGRTVIAFQPHLYSRTDNFAKEFAQELAKADLAFVLDVYRAREAYREDINARTITDLDPRLQPSGDLEATTELLAEVCQPGDVVVTMGAGSVTQIGPMLLERLAQRG
>NZ_CP017812.1|WP_071164310.1|1363495_1364593_-|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase
MKVLLAGGGTAGHINPLLATAAALVAGGDEVLALGTQSGLEAELVPAAGVKLEYIPKVPLPRKPSLDLLKVPLNLSRAVKRCEQICRDFQPDVVVGFGGYVSTPLYLAARKMGISIAIHEQNARPGLANRLGARFAKALGLTFASTPLKAKAGITEVVGLPLRPAIGQLVKQKAEDDSSARIEAAKHYGFDPALPTLLVTGGSLGAAHLNQVFADNLGTLPKNVQVLHLTGKGKASDLLRLTAHLPNYRVQEYEPEMEKALAIADLVVCRSGAGTVAEMTALGLPAVYVPLPIGNGEQKLNAADVVAAGGAKLVLDKDFSAQTLTEVVWPWLTNPQELATASLASASCGVQDAAQRFAQLVRKVA
>NZ_CP017812.1|WP_170299671.1|1364601_1365837_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MTRNNFPPTMLQAEENGPEPSAHYFYIILSCVILLSAMGMALVYSASSVRLLSNWHEFYVGMGKNLLYYLVGFLALTIVSKLPVWLLEASTYIVFPFAFALQILTFFIGKEIGGNRNWLTIPMLGDVQPSELLKLAFIMALSLLLTRFPLDLRQGVNAYVYLTGLLILGVGPVILCGDMGSSIIFVVIFFIMILMYGAKIQYLGFLVIVGVAAGAYGVMHNPTRLARVSKKVMSIFGMAVTEEKTGPEQSDHALWAIGNGGLAGVGPGGSREKWLRLPTADSDYVFAVLAEEYGFLGGLAVLAIFFLLMYAIFQVAWLQQVPWLRFVCLGMGVWISFQAAVNIGVVIGVLPVLGVPLPFISRGFSALLSTLAGMGIVLAAAKSVPGAKLVFSTRARSAKRVNSVLSRTAKS
>NZ_CP017812.1|WP_071164312.1|1365863_1367396_-|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase
MSNSFQNLPTDLPDTNIFAQAKRAAVLGAATTGLAVAEVLTSQGIEVTLYDGSQSAVDKAQAAGFNAIGGEVNELGEQIVAEEYDLVVASPGIPPSSQLLAPALAAGRVWSEVELAWHWQQAQGGKQPWLCVTGTNGKTTTVGMCGAILTAAGYRAPQVGNIGRSILTEVATGEYDALVVELSSFQLFYAQDMAPTASVCLNVAADHLDWHGSTEAYAKAKAKIYENTITACVYPESDAAVIKMVEDADVAEGARAISFTLGSPAPSGIGVIEDNLIDRAYLPQRQTQALFMASFADLAHLGPSALSPALVSDALAAIALTRALDVEPEAVSAGLRSFELAGHRRRDLGVVAEVNWIDDSKATNAHAAAASLAGIAPGRAVWIAGGLAKGQDFHDLVKSVAPRLRSVVVIGEDRSAWLEAFAEHAPQIPLVEVDGHEDFMMSVVHECVAHSLPGDTVVLAPACASWDQFNSYAQRGEAFAQAVARLAEQQAEAQTMPLAPSSEDTNGAGS
>NZ_CP017812.1|WP_071164313.1|1367392_1368475_-|phospho-N-acetylmuramoyl-pentapeptide--transferase
MMAILIALGISLVVSLFGTPFYIKFLIKRQYGQFIRQDGPTEHLTKRGTPTMGGVMIIFATLVGWLSAYAFAGRWPALSSVLLMWLFVGAGVIGFVDDFTKISKQRSLGLNPLAKIIGQVLVGTIFALGATLIEAPDGRTPASTAISIVRDTNFDLATWGMGLGIVLMILWVNLLVAAWSNAVNLTDGLDGLATGSSMVVFGAYTFISIWQYYQDCTKVDSLGCYQTSNPLGLTIVSAAIVGACFGFLWWNAAPAQIFMGDTGSLALGAAVAGLSILTHTEFLAIIIGGLFVIIVMSDVIQITSFKLTRKRVFKMAPLHHHFELLGWREITIVIRFWLIAGVFAILGVILFYAEWAATVR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP017812_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017812_3

1882544-1882640

Orphan

Consensus_repeat	Method
CAGGCTTTACCGGTGCAGGCTTCGCAGGTGCCGGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017812_3

>merge|NZ_CP017812|3|1882544-1882640|CRISPRCasFinder
CAGGCTTTACCGGTGCAGGCTTCGCAGGTGCCGGCTTTGCCGGTACAGGCTTTACCGGTGCAGGCTTCGCAGGTGCTGGCTTTGCCGGTACAGGCTT

>NZ_CP017812|3|3|1882544-1882640|CRISPRCasFinder
CAGGCTTTACCGGTGCAGGCTTCGCAGGTGCCGGCTT	TGCCGGTACAGGCTTTACCGGTG
CAGGCTTCGCAGGTGCTGGCTTTGCCGGTACAGGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017812.1\|WP_071164649.1\|1867317_1868694_-\|zinc-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|378392
NZ_CP017812.1\|WP_071164652.1\|1870887_1872705_-\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP017812.1\|WP_170299677.1\|1887683_1888517_+\|transposase	unknown	unknown	gnl\|CDD\|371130
NZ_CP017812.1\|WP_071164650.1\|1868690_1870085_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|334815
NZ_CP017812.1\|WP_071164653.1\|1872720_1874481_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP017812.1\|WP_071164661.1\|1890505_1891318_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP017812.1\|WP_071164995.1\|1888581_1888800_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071164662.1\|1891430_1891880_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071164647.1\|1865453_1866008_-\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP017812.1\|WP_071164664.1\|1892953_1894348_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349882
NZ_CP017812.1\|WP_156982013.1\|1886153_1886705_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071164651.1\|1870323_1870818_+\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|376376
NZ_CP017812.1\|WP_083379159.1\|1883764_1884928_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP017812.1\|WP_071164654.1\|1874704_1876288_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
NZ_CP017812.1\|WP_071164646.1\|1863392_1865369_-\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl\|CDD\|273520
NZ_CP017812.1\|WP_071164663.1\|1892030_1892483_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|153102
NZ_CP017812.1\|WP_071164660.1\|1889703_1890354_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071164648.1\|1866127_1867321_-\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP017812.1\|WP_071164658.1\|1885047_1886124_+\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP017812.1\|WP_071164655.1\|1876510_1881229_-\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|275380

Protein	Function_ID	Function_description	E-value
NZ_CP017812.1\|WP_071164649.1\|1867317_1868694_-\|zinc-dependent-metalloprotease	gnl\|CDD\|378392	pfam10103, Zincin_2, Zincin-like metallopeptidase. This family of proteins has a conserved HEXXH motif, suggesting they are putative peptidases of zincin fold. The structure of this family has similarity to Peptidase_M1 (pfam01433, Structure 3CMN).	9.66727e-20
NZ_CP017812.1\|WP_071164652.1\|1870887_1872705_-\|sodium:proton-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	2.52947e-53
NZ_CP017812.1\|WP_170299677.1\|1887683_1888517_+\|transposase	gnl\|CDD\|371130	pfam10551, MULE, MULE transposase domain. This domain was identified by Babu and colleagues.	2.0937e-07
NZ_CP017812.1\|WP_071164650.1\|1868690_1870085_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	6.42932e-42
NZ_CP017812.1\|WP_071164653.1\|1872720_1874481_-\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	4.7919e-35
NZ_CP017812.1\|WP_071164647.1\|1865453_1866008_-\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	1.79279e-86
NZ_CP017812.1\|WP_071164664.1\|1892953_1894348_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349882	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family. Peptidase M20 family, Aminoacylase 1 (ACY1; hippuricase; acylase I; amido acid deacylase; IAA-amino acid hydrolase; dehydropeptidase II; N-acyl-L-amino-acid amidohydrolase; EC 3.5.1.14) subfamily. ACY1 is the most abundant of the aminoacylases, a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. It is encoded by the aminoacylase 1 gene (Acy1) on chromosome 3p21 that comprises 15 exons. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney, suggest a role of the enzyme in amino acid metabolism of these organs. Defects in ACY1 are the cause of aminoacylase-1 deficiency (ACY1D), resulting in a metabolic disorder manifesting encephalopathy and psychomotor delay.	1.18738e-70
NZ_CP017812.1\|WP_071164651.1\|1870323_1870818_+\|inorganic-diphosphatase	gnl\|CDD\|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	3.86439e-80
NZ_CP017812.1\|WP_083379159.1\|1883764_1884928_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	5.36175e-20
NZ_CP017812.1\|WP_071164654.1\|1874704_1876288_+\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	1.29295e-07
NZ_CP017812.1\|WP_071164646.1\|1863392_1865369_-\|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP017812.1\|WP_071164663.1\|1892030_1892483_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|153102	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain. DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) display an N-terminal extension of variable length that contains two or three positively charged lysine residues that extends into the solvent and is thought to play an important role in the stabilization of the complex with DNA. DPS Listeria Flp, Bacillus anthracis Dlp-1 and Dlp-2, and Helicobacter pylori HP-NAP which lack the N-terminal extension, do not bind DNA. DPS proteins from Helicobacter pylori, Treponema pallidum, and Borrelia burgdorferi are highly immunogenic.	2.42455e-39
NZ_CP017812.1\|WP_071164661.1\|1890505_1891318_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.42879e-09
NZ_CP017812.1\|WP_071164648.1\|1866127_1867321_-\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	2.18994e-44
NZ_CP017812.1\|WP_071164658.1\|1885047_1886124_+\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	7.61817e-39
NZ_CP017812.1\|WP_071164655.1\|1876510_1881229_-\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	6.23924e-61

>NZ_CP017812.1|WP_071164655.1|1876510_1881229_-|leucine-rich-repeat-domain-containing-protein
MRFGRVFGSVVACASLLVSPLLGANVAFGADGEVGAVGEAPISVYDPQTSLGLSPVSALGGNGAAGGGIVIARAPLTGGKFVDVSRETLFSGEMAWLANAKVSTGWPARGGRAYRPLANIERQAMAAFLYRLAGIDKSGYRPPLRATFKDVPVGSQFFKEVEWMAATGITKGWPDKSFRPLGPVNRDAMAAFLARFVKKYPSKVSRAIVELGAPGSAVGNVFVDVPVGTQFAAEMEWLKKTEISTGWVRAGKRFYQPVTPIHRDAMAAFLYRLKNNKAATPITPKPEAVPESVDNGVSTVSVNLKPGSNSLSVPGLSLAKVALVRFSASAPLSAKGRVSTVKSNNSTFWVGRGAEVFSATTFLPVAGGKLVLQSSANLKGRIQVLASFNSSADQAGSTVMLPKIQVLVDSVKHLGLPSVGAKAQSFTATGIEIPTGSRFAIVRLETNYAKGGTVTVAGQTLAMPVGQVATTTVIPLGADGQVSLASTGSGLTRLTAVGYISADLPDQTGANKPSSVGDAFVGLTGLKAQSFKAQANRAVALKVPAGLNAKGFLTLTNTNSKARISGANALPGGAPNSKASSTGTLQGQDRAPELVLTAGKTPQLSASAQGNVQTLPVGYVQDARAQAAKAVGAPSINLTSPKNGASVKVDHGVIRFNGSFTSPGKLDRIEVWVGGKFVSKLAEVTLSGNGGSWRYDLIPPKTETAKVEFRLFDALGRKAVTSWNGKVVLPPKNATIIAPDTKVLSAAQVAKDDVKVISPVHVTSKNKPSFKPGEIVAIPGGKNAPNGLLGQVAAVVYQDGKWNTITRPVQLGNVLLQGDYDLVITKDAAGQNVAKPYVEPKAATKPAPKSGAGAPIGAASAPENRPETATGVANPNMVVPATLEPTPTPTGEGAQLLSFTGEVQAETGGDFNADLDKSLFNFNCSEGFGQAKVERSAKRTTKNLVYSASAAASIDEVKCHVGLNLRVKYHSTWQGDGNPWINAAGVIANKPGLAAFANSLVEGNWKLSTSFLSTVSGSVAATSQGKASIALNQKTFEKTISGTVKFALGPVPVVVNLSGTLTPVMSVELSAAMSGKAGFGASHEFGMSIARGFKVEKINRSSSSKAFEFSGNASATMKAGVALIPQASLYGILTLGVRAEAGLKAQASGEVKGRFVLGKNDPNLEAKGSTSGSAYLTVNGTYKFGLDTDTILRTYGNDQIANTAKSVGFYKDLSKSGSVPVINWNYQLWNLKFQNGKNAANKPENQKPVTAQELTKARKLVEEKCDKRFYTDSWELVCLLDELNPSVTKAINEKLTKEKTTDLVLQVEKTETINDDNLNFPNLEYLNLAYNELGVVPDFSHLPNLKYLNLFANNLRVVPDFSHLPNLESLDLTYNKLGGVPDFSHLPNLESLDLSGNGLGVVPDFSHLPNLEDLSLGGNGLGVVPDFSHLPNLTHLSLGTNELGVVPDFSHLPNLTHLNLDGIGLKVVPDFSHLPNLEWLDLKENGLGVVPDFSHLPNLEWLDLTYNKLGVVPDFSHLPNLRWLDLENNKLKVVPDFSHLPNLEHLELSDNPFEKCPTFTKLPEHTDVFKGC
>NZ_CP017812.1|WP_071164654.1|1874704_1876288_+|hypothetical-protein
MALFEYENGRFLHAQFGRQVDGSIPEVVLESLRASVMDILPRPLFPVAWLEGDGTTPRLIALDASGQVVSVQVVARLESEELIAALSSLNEVRLLGWNELSGMYPGGQAAFRAGLADFRAKMPANPSPGPRLVVVAAEIAPNLRPAIDVLSASGMEVNLIALREMSNGRQFIEVTPLLNAFWGYQPNVIASGASPRFSQVTAGPARQVQVPSLHAEGVFPVGTAPAGATAQSGFGAPSAPTAPAAPVASAAPEATAASATPVASAVDALVAAAPVTPPAPAAATDVSSSVSAETSTVASDAAGVGVADDSDVATPMMGVQSVTAAEEDEVSSRVRARLSRRRASRTVDSRVLKAAARQANTTGFGRPSAAAPVVNEAEVSEVKVAPAPIAQPETTQPELEQVATPVADGGVFARNAMGLRRIATEIGREVELVAVIEAEPLTLRLGPTGEVAGPDGQITTLIAPLRQAGLHTTSDGWEHWHIESMAGPTLLDALDEINAGAGSQEHRPEPAPLTTPHGMAIPSRRRH
>NZ_CP017812.1|WP_071164653.1|1872720_1874481_-|C40-family-peptidase
MSIAKRPLLTVLALSVALTVLPFVPTQNDPSAKADTPETPSLGQLKEEVSNDPRVAELESQLASLRAEKEEATMKLLVAAEDYQRAQDELENTKKNLATTQKAVDDAVKAREAARADLASVVLAVYQDSSVSLAALAPYTESDGLNNVAVRAQAVELFGKEAHDKLQRFEAASNVANVLEKQAKKDLAAQEAAIKTVEQKREEAQRVANESNARVQALETKREALITELARKKQRSIEEERRHQEQIEAEAAARQEAAARARFERETQQAQTKAENETKRDQAVEAAQNRDAQRNAEAQEKAAKQAEENAKKAADEAARKEREAKAADEAAKKAADEQAKAQADKQKAEEARRQAEEARKAKEKRDREAAAARAEAARKAEEARKAQEKREREERERREREEKARQEREAKERREREEREAQERREREEREAQERRDREAQKERDRREAEKREKERKENEDSGPASGAAGAIAWAKKRIGVPYVWGGASDSGYDCSGLMQGAWRSQGVYLPHSSRSQYFSGKKIPLNSAKPGDLLFWSWNGSSGGIFHVAMFLGEGRMIEAPVPGQTVTITSVRYRRIMPYAVRVN
>NZ_CP017812.1|WP_071164652.1|1870887_1872705_-|sodium:proton-antiporter
MDGLIVVGIVALLVIVASEHLGERTGVVAPLTLLFLGVAVGLIPQIPNVTLSPEIILELILPPLLFASAVAMPVMDFRRNLGPISTLSVVLVIATAGVLGWFFHSLVPGLSLAGGIALGAIISPTDAVATSIIKSKGVSHRLVTVLEGEGLINDASALVILRSAIAASAAGTVSFVMVGLDFLWAVLGALVIGWIVGEISIRIRSKVTVSSADTVLSLTVPFIAAIPAEYLGSSGLVSAVVAGLITGHHGARLIPPDHRLTTKQTWSVVSLVLEGSVFMIMGIQIGALLDDLRADTLTFSHALWMALLAIVITLLMRTLLVMPLLALGRHRIREKPKDTPKTRLSINDRQRRIDAKGVKLSKRQAANCQNTTGLQRRIDRAVADLRYYQEAKLTNRDGIVMIWAGMRGGVTLAAAQTLPYNTPHRAFLLVTAFLVASISLTIQGGTLGWLIKKVKPTPQTPPSRADRTRLIRVMVRAFESVPVPPKLRAALGKEENEMLADARGGALALATRLFDALSEEMVNEMRPNETFVGISLSTDLNKPKIDREIAALAVQYALDVADAQRCALIAARDSGNIDSTLLSAALANLDADQINLELHLHPDHH
>NZ_CP017812.1|WP_071164651.1|1870323_1870818_+|inorganic-diphosphatase
MEFDVTIEIPKGNRNKYEVDHETGRIRLDRMLFTSTRYPDDYGYIDGTLGEDGDPLDALVLLEEPTFPGCLIRCRALGMFRMRDEKGGDDKVLCVPSMDQRASWRTDIEDVSEFHRLEIQHFFEVYKDLEPGKSVEGAHWVGREEAEAEIKRSYERAKEAGLDH
>NZ_CP017812.1|WP_071164650.1|1868690_1870085_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MRSPALIPVTLTAALAASALVYVGLDIADVAPGILTTQPAAQADPPPAPPAADDLGPKDPVDLAAAKKAPLPNQDKLKAALAELEKTVKAAKGRLGVQISDLATGKSQLSFHAGDAITPASTTKLYTSTAVLANLDVNKRFQTATYVKNGTVYLKSDGDLMLAPDKGDKHSTMGYAGLGDLAQQTAKALRGKYDSVEVKVDDTAITGPERNPVWGPQDTQNYAGNVTDMAIYQGRPDPNVPKGFNQNPQAEAASKFAAALKNAGINVRGQVGFEKVPDGADELAKVQSDTWAKQLQYLGKTSDNTLSEQFCRILAAKLGAPANFAPAAAAMTKNLADAGVDMKNVKLNDCSGLNADNKTTAASLVSLLRHDLTGKDRKLYGIVDDLPVAAWDGTLGNRQIDTASAGQVRAKTGSLSGVRSLAGIARTNAGRDLVFAVLIDNCEPGAVHIVRNAIDKFMAQVVEA
>NZ_CP017812.1|WP_071164649.1|1867317_1868694_-|zinc-dependent-metalloprotease
MRIEELDEGRWTRWSRRLPFLPTCTWEDSVRWATQIVTPGPAISRAKGRAAVAMLGRTENTLGEQVEELTGLNRELLAEVEVVALDRPKWIVALSHTLRHLINPRPVSSSRPLRSPVRAGAMSALFTAAANRVYGHYDPTVKNGVIYIVTPNVVAAERGDGLDSMDFRRWVVLRTALYAAQFKAAPWLVSYIRTHASLVATKAGAEDLTAVSLPGLLRALRAVDLSEKDDLGALISAAGYDPTLSDPAWAAPANTTASLRRHPRGYTLRPPVKTDENQGANDTQTTEAGQNTTSSIEAQNNGIPNYPAASLATAGNPSVTDASLDESLRQLTILAGILDAYMRVSLEAITPTMFPAIQRIRHATSATPSPIDLVMRAFASALQLPTVRFSSFEARRFIRTIRAEAGLVAPNLMFKCPQNLPTAAELADPHLWLVRLGLQKPTDQTGKPPSAQQTRGVK
>NZ_CP017812.1|WP_071164648.1|1866127_1867321_-|tRNA-lysidine(34)-synthetase-TilS
MTARPPISDVIGPNPTGAVRRVSLAIRQSLLRVSRDGQPQYAVVACSGGPDSMALAALTIDVAASLKIPVHTVTIDHQIRPESSIEAEQVAATMRRLGAANASVVKVNLAAASRYGDASSGPEGSARNARHAALERECRVLARAENARVYLLYGHTMDDQAETVLLGLGRGSGLRSLAGMKLVAPPDDADQHQPWKLRPLLSVRRTDTELVCKHLGLPAVNDPTNAADGPWRCADGSALRRAAVREFALPALAGALGKDPAPALLRTAWQMQRDNECLDQIAEALLADAECEVHDSTYTGRRAKVDLDIEKLTNLHEAIVSRIVRLAALQAGANASALNSTQIDAMTALVLQYRGQGPVYLPGGVVAARVRLDPPTPHGTPGLAQYDASAAIRLSFS
>NZ_CP017812.1|WP_071164647.1|1865453_1866008_-|hypoxanthine-phosphoribosyltransferase
MDPRDCKDELAEILITEEEMQERLAEMAQQISADYAGKNLLLVGVLKGAIMVMADLSRKIAIPVEMDWMAVSSYGSGTKSSGVVRILKDLDTDLAGRHVLIVEDIIDSGLTLSWLVRNLENRGAASVKIAAALRKKEAAKVEVDVEYLGFDIPNDFVVGYGLDYAEKYRTLPCVAKLSPHVYEK
>NZ_CP017812.1|WP_071164646.1|1863392_1865369_-|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MAQIKKTAPRGGSFIVIALIISLLGAYYLWGALGPRPIDTSEGLALLKGNTVERVVVNDSTQQVNLTLTEAYTTPARPGNDTAIPRGKEVTFTYGNAQAPKLFETLAEKDPKGGYNALNPQPGVAEYLINMLLPMVLLVLGFYFLYSWMMKKGGMGAMGGFAKSRAKEFDHENPSTTFADVAGADEAVEELEEIRDFLTNPTKYTDLGARIPRGVLLYGPPGTGKTLLAKAVAGEAKVPFFSISGSEFIEMYAGVGASRVRDLFVRAKAAQPAIIFVDEIDAIGGARGNAISGGGEEREQTLNQMLVEMDGFDERTSVIMIAATNRPDMLDPALLRPGRFDRQIAVEAPDLKGREAILKVHAKGKPIVDSVNLHAIAKRTPGFTGADLANVLNEAALLTAREDADLIDIRAVDEAIDRVIAGPQKRTRVMNDHDRLVTAYHEAGHALCAAALNHTDPVTKVTILPRGRALGYTMVMPVEDRYSKTRNQLLDDLVYAMGGRVAEELVFIDPSTGASNDIQNATANARKMVTDYGFSDQIGNVKLGGGESSGLTGARYGRGEETPMSGKTAVTVDDEVRRLMDNATKEAWEILTRNRQVLDTLALELLEHETLLEDELKRIFSDLVKQPEREVWNYLADAAVPGTEFGHPIDMPKDEEID
>NZ_CP017812.1|WP_083379159.1|1883764_1884928_-|alpha/beta-hydrolase
MSASENSGLKIDLTADLAAAKDGYEPDILGPGFVARTLELQDDDEGPVVATLVRYDPKADPEAIEPDGPVPTFNLLYVHGWNDYFFQKELARNCATMGARFYAIDLRKYGRSLREGQTFGYVDTLDTYDEDLHAAINAIQAGDLAEVGRVRPLVLMGHSTGGLTAALWADRHPGSLAGLILNSPWLELQTAASMRGVSQPFVERLAARSPFRELPLGGGPNFYGMSLAGWQESDGPLPPELEAWPDDPANTGWNTNPEWKKPGGAPTRAGWFNAILTGHAKVAAGLDIHCPVFVGISIESASGSEWHPIMRRQDTVLDVSVIALRALNLSRSVTLNRYDGKHDLALSDPDVRPEYYADLHHWLGAFVRAEDGSRLATPGRKEYPLCP
>NZ_CP017812.1|WP_071164658.1|1885047_1886124_+|YdcF-family-protein
MYFLPLIALALLVPAAVLATIWLVEPRSILLGFAIEALAFAVLVVSAVMAFRIGDRLEGMEVWYTLFTIFGVIVILALTIFPIFLYFFVFANGFKVIAKEGFSLAHALAVGSCLAIAFWWIFMPRISHLVRGTNWVYLVTYVNLLLFYLAFVASGFFFAAMANLWHWRKKNQDYLVVLGAGLAGDRVTPLLASRIRRGVKLAERSPSAKLVMSGGQGPDELLPEAVAMANYAVEELGFPQDRILIEDRSVNTDQNLQFSQRIIFQDWEKADLRAPRIAVVTNSYHVFRALLVARAHRVKCVGYGAKTKIYFSINAFIREFIGYLYMSRRTHAIILGVCTLLYLAGVIISVTTLGGIEA
>NZ_CP017812.1|WP_156982013.1|1886153_1886705_+|hypothetical-protein
MNYYNKITTHSFTLKSQVFVLVFIYEKSQELKGGILMGNYDIFDILTAIMFITYGIWAIAIFVLFIKANYSPFFALFPWVRLAFLCDIVFGSRLLIFCLFIPFYNLYFVALLTYKTALAFGGSARLGKIAILFPPLITILVAFHPKFKYVGFQEPYFGKADWSKPLLSRIFLFENKKYLKSVS
>NZ_CP017812.1|WP_170299677.1|1887683_1888517_+|transposase
MHKNGTRNGATRYRCPNCRFNTARRVDTTVRQLKTFLDYLGGKTTQSDLPGAGRTFRRKSEKFWKIWPVSPTVDEVFNYIFIDGIYLGHQNRIGKRKSENAVLLIVSTIIDSKATVLTWHLARRECTASYEDLLSRIAPPKMVITDGGSGFARAKRKCWPQTHHQRCLFHVYNNVATKTTQTPKLDARKALLRIAKALPKVKTIAQAKTWLQTYQLWKTYYKAFLAEKTLGEYGSIRLHPQTPSTSQKHSRYLDQKTAPLHLPCTRSKGNFAPTKHK
>NZ_CP017812.1|WP_071164995.1|1888581_1888800_+|hypothetical-protein
MRQIKTCMFLLSRMVENPLRETEILTQWPTDEQIENYYKQIHQNQTNQQHPAGWGTAIQWYELHLSDPNKAP
>NZ_CP017812.1|WP_071164660.1|1889703_1890354_-|hypothetical-protein
MEDYGEILAYGILLSIILAVLIAYFVIYRSEKMELLPLSPEEEDFNRKFESIRQTRLGLNFAKRGTLGSRFYKRAAFLERYLYKTESKETVAYFSGDSRSLELTKFQLRVINQSNNSVCAVYDLREVKVYLGGVGARTSLDIYMGGQLVSQVIEPSVASYPSIAEFKCEVDYYQSKYYDSLNEVESHRRNAEFLESEAEERVKRRSGASFESNEDE
>NZ_CP017812.1|WP_071164661.1|1890505_1891318_+|GNAT-family-N-acetyltransferase
MSFVLRTPTREEFSVRQAWLADPEMMSFNAGWPIDNDSYDRETGCFDWSEDRWDDWIERRLSLPGDVQGYFYVIDEGSGEPVGHAHYMVNGNWAEIGLNTVPRLRRQGIASQVLPLLLERVWRDTSVDFAMNLIEQSQQAAVALHEKFGFECSKEPYMVFEDKRSFLWLLPRPTKDFDQSRRLEWGRDLLLRVVPNAESWLDSTVSREREEGLAPGRWGGTLAEVAELGKRAAGVTGGSPTRMAVTSRWTDEQREELYVYEVKRFYGQIR
>NZ_CP017812.1|WP_071164662.1|1891430_1891880_+|hypothetical-protein
MPFILNLDNIDEIKNETDLLKYFFRQLQYFALSTWLVTNILLFILSFLGFYLVFKKVGFEEWKAFIPFYRLFIISEIIFGSKKFAIGFFIPIINFITAIIFAFKLAQAFNANELLAILTFFFPSIGLTLIGLNEKYQYKGVQRFPISLS
>NZ_CP017812.1|WP_071164663.1|1892030_1892483_-|DNA-starvation/stationary-phase-protection-protein
MAVNEAVAKAMQQAVVDLNALALQGKQIHWNLQGKNFLSLHEQLDTVVDFARTSYDEFAERLVAIGGTPDGRANTIADTSVLKPLKEGYINVDEAYPIFESALMDVAAEMIKHIDAVDEVDHLSADLLISTARELEKTAWMLRAEMGKLG
>NZ_CP017812.1|WP_071164664.1|1892953_1894348_+|M20/M25/M40-family-metallo-hydrolase
MGTLRADSNYSDCSDGNGIFTSSSHPPSSEKKPDSYWQAMFASDGEISKLLSQITPKMIKWRHYFYQHPELSNNEDKTAAYVLHRLSDFGVDEIKSDVAGNSVVGIINGCGEGKAILLRAEMDALPIRQSHAWKGRYSKKMSLLPHSPDISHASGHDCHIAILLGVAKILCEFRDRFRGKVILLFQAGSEGDYLKKKLNSARQILLDGILQINAPTMAFSLKSAPAPTGTLSCRKGLQFAASTRVNVAFDATMNTNMFEPERTPDPVTALASFLTQVEQLKKRSTNKDSFLAYFGHFWDRGRFNLLPTKTAAWGKIHYFDVDEFNCFKTELERIAEESANAFRCESKVVFDQHIPELKNTSNIVEEAYPVLVDVVGENNIFESMPSFKSDDFSELINEFGGVEILLGVQDCEYPKNGSVDLDRLALSASSPTHTPHFYAQDEALEVGAKVCLRMALAHLSGEVG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP017812_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017812_4

1975253-1975329

Orphan

Consensus_repeat	Method
GCCACCACCGGAGCCGCCACCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017812_4

>merge|NZ_CP017812|4|1975253-1975329|CRISPRCasFinder
GCCACCACCGGAGCCGCCACCGCTAGAGCCACCACCGCCACCGGAGAAGCTGCCGCCACCACCAGAGCCGCCACCGC

>NZ_CP017812|4|4|1975253-1975329|CRISPRCasFinder
GCCACCACCGGAGCCGCCACCGC	TAGAGCCACCACCGCCACCGGAGAAGCTGCC
GCCACCACCAGAGCCGCCACCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017812.1\|WP_071164718.1\|1983119_1984757_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|312032
NZ_CP017812.1\|WP_071164707.1\|1969955_1970327_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP017812.1\|WP_071164705.1\|1968480_1968966_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207
NZ_CP017812.1\|WP_071164710.1\|1973745_1974204_-\|DIP1984-family-protein	unknown	unknown	gnl\|CDD\|213403
NZ_CP017812.1\|WP_071164713.1\|1976954_1977515_-\|LemA-family-protein	unknown	unknown	gnl\|CDD\|377192
NZ_CP017812.1\|WP_156982022.1\|1987300_1989175_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071164711.1\|1974453_1975161_+\|VIT-family-protein	unknown	unknown	gnl\|CDD\|153123
NZ_CP017812.1\|WP_071164706.1\|1969535_1969718_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071164715.1\|1978866_1979676_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_156982021.1\|1981623_1982688_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071165016.1\|1969022_1969286_-\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197385
NZ_CP017812.1\|WP_071164714.1\|1977675_1978473_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP017812.1\|WP_071164716.1\|1979698_1981624_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008
NZ_CP017812.1\|WP_170299679.1\|1965663_1966347_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181298
NZ_CP017812.1\|WP_071164709.1\|1971509_1973513_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP017812.1\|WP_071164721.1\|1986779_1987304_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP017812.1\|WP_071164719.1\|1984782_1986012_-\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236134
NZ_CP017812.1\|WP_071164708.1\|1970304_1971399_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017812.1\|WP_071165015.1\|1966908_1968276_+\|protoporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|215314
NZ_CP017812.1\|WP_071164720.1\|1986008_1986707_-\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814

Protein	Function_ID	Function_description	E-value
NZ_CP017812.1\|WP_071164720.1\|1986008_1986707_-\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	2.90282e-88
NZ_CP017812.1\|WP_071164707.1\|1969955_1970327_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	2.78338e-23
NZ_CP017812.1\|WP_071164705.1\|1968480_1968966_+\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	6.98484e-99
NZ_CP017812.1\|WP_071164710.1\|1973745_1974204_-\|DIP1984-family-protein	gnl\|CDD\|213403	cd12208, septicolysin_like, putative septicolysin, cholesterol-dependent cytolysin family and related proteins. This group contains some members identified as septicolysin. While septolysin is poorly characterized, it has been identified as a a cholesterol-dependent cytolysin, and acts to facilitate the infection of certain pathogenic bacteria to cells. Cholesterol-dependent cytolysins are pore-forming toxins that aid in bacterial pathogenesis of various gram positive species. Pores are formed by oligomerization into ring-like structures. Related proteins in eukaryotic immune systems use this pore-forming mechanism.	1.62087e-63
NZ_CP017812.1\|WP_071164713.1\|1976954_1977515_-\|LemA-family-protein	gnl\|CDD\|377192	pfam04011, LemA, LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain.	3.61952e-45
NZ_CP017812.1\|WP_071164711.1\|1974453_1975161_+\|VIT-family-protein	gnl\|CDD\|153123	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. .	3.20142e-85
NZ_CP017812.1\|WP_071164718.1\|1983119_1984757_-\|alpha/beta-hydrolase	gnl\|CDD\|312032	pfam08386, Abhydrolase_4, TAP-like protein. This is a family of putative bacterial peptidases and hydrolases that bear similarity to a tripeptidyl aminopeptidase isolated from Streptomyces lividans. A member of this family is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterized from Propionibacterium freudenreichii.	2.96193e-22
NZ_CP017812.1\|WP_071165016.1\|1969022_1969286_-\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|197385	cd10148, CsoR-like_DUF156, Transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this domain superfamily was previously known as DUF156. This superfamily includes various transcriptional regulators that respond to stressors including Cu(I), Ni(I), sulfite, and formaldehyde. It includes CsoR (copper-sensitive operon repressor) from Mycobacterium tuberculosis (MtCsoR), Bacillus subtilis (BsCsoR), Thermus thermophilus (TthCsoR), and Staphylococcus aureus (SaCsoR), Mycobacterium tuberculosis RicR (regulated in copper repressor, MtRicR), Escherichia coli RncR (formally known as YohL, nickel and cobalt-sensitive), Alcaligenes xylosoxidans NreA (nickel-sensitive), E. coli FrmR (formally known as YaiN, formaldehyde sensitive), and Staphylococcus aureus CstR (CsoR-like sulfur transferase repressor, NWMN_0026.5, SaCstR). CsoR is Cu(I)-inducible, and regulates the expression of genes involved in copper homeostasis. For example, TthCsoR binds the promoter region of the copZ-csoR-copA operon, and represses expression of these genes, which encode the copper chaperone CopZ, CsoR, and the copper efflux P-type ATPase CopA, respectively. In the presence of excess Cu(I), TthCsoR binds this ion, and is released from the DNA, allowing expression of the downstream genes. TthCsoR also senses other metal ions such as Cu(II), Zn(II), Ag(I), Cd(II) and Ni(II). CsoRs form a homotetramer (dimer of dimers). In the case of MtCsoR, two Cys residues on opposite subunits within each dimer, along with a His residue, bind the Cu(I) ion. These residues are conserved in the majority of members of this superfamily. Exceptions include the functionally uncharacterized Bacillus subtilis YrkD where there is an Asn instead of His (C-N-C), E.coli RcnR where there is a Thr instead of the second Cys (C-H-T), or TthCsoR and E.coli FrmR where there is a His instead of the second Cys and which have an additional N-terminal His (not found in those family members having C-H-C) that may also be involved in metal binding (H-C-H-H). A conserved Tyr and a Glu residue facilitate allosteric regulation of DNA binding. SaCstR regulates genes predicted to function in sulfur metabolism; it is thought that oxidation of the intersubunit Cys pair to a mixture of disulphide and trisulphide linkages by sulfite, results in a reduced affinity of SaCstR for the operator DNA. SaCstR exists as a mixture of oligomeric states, including dimers, tetramers and octamers. The sequence of SaCstR was not available at the time this hierarchy was curated and therefore was not included. Escherichia coli RncR represses expression of the gene encoding the nickel and cobalt-efflux protein RcnA. The gene encoding Alcaligenes xylosoxidans NreA is part of the nre nickel resistance locus located on the pTOM9 plasmid from thisbacteria. Escherichia coli FrmR regulates the formaldehyde degradation frmRAB operon.	6.71935e-22
NZ_CP017812.1\|WP_071164714.1\|1977675_1978473_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.38482e-08
NZ_CP017812.1\|WP_071164716.1\|1979698_1981624_-\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	1.08023e-15
NZ_CP017812.1\|WP_170299679.1\|1965663_1966347_-\|SDR-family-oxidoreductase	gnl\|CDD\|181298	PRK08219, PRK08219, SDR family oxidoreductase.	1.53675e-91
NZ_CP017812.1\|WP_071164709.1\|1971509_1973513_-\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0.00511715
NZ_CP017812.1\|WP_071164721.1\|1986779_1987304_-\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	8.07496e-19
NZ_CP017812.1\|WP_071164719.1\|1984782_1986012_-\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236134	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated.	3.27774e-154
NZ_CP017812.1\|WP_071165015.1\|1966908_1968276_+\|protoporphyrinogen-oxidase	gnl\|CDD\|215314	PLN02576, PLN02576, protoporphyrinogen oxidase.	1.69292e-71

>NZ_CP017812.1|WP_071164711.1|1974453_1975161_+|VIT-family-protein
MASGTHPQEAHREDHASKLNWLRAGVLGANDGIVSVAALLLGMIGAHAQSATILTAGLASLVAGAVSMALGEYVSVSAQRDTEKFLIQKESWELENLVEHEHEELKTILCSYGMSPETAETAVNEIEAGDPLPVHLRLELGIDGEDLTNPWAAAGSSALAFTLGAALPLLTALLAPLTGQAWYVIVVTLATLALTGFISAKLSETDPVRAVVRLVLGGGLGLAITYGAGALFGAL
>NZ_CP017812.1|WP_071164710.1|1973745_1974204_-|DIP1984-family-protein
MKLAEALAKRADVQTRMVKLQPRTSNMMQVQEGEKPEEDPKELLAEYDRLLAEMTTLVMRINRTNVATKFDDEHTIADAIALRDAAKKEHNFYQQMADAASARQNRYSASEIKYVPTYSVTKLRKKADEAAKRYRELDTKIQGLNWNTDLLD
>NZ_CP017812.1|WP_071164709.1|1971509_1973513_-|hypothetical-protein
MDEQNTKVSESENNYGNNCSRDGKTGEWEYASAVIMMQIPDCMEMLKPDWKLLCPEPYQADDWIHRVIRQDSIDRKLPEPDVFNRHHCSPFEPGYRKDGYSYRDQRPLPANVAKVETGSNEAPPNVLAKHSAWFRKSAMHKAMYLKEIRLDLSELRKAKEKSGHFANWGEVEIQYEEDSTGSFKTKRFTDPIELLAYEGVQVMRIEMRAFGGKPIEEIRSNDTSTWNRSNLNFGPDDDKFVCVHLQLPTNDVFRVISAVRRPLDLINKNFPPDLQANRNLDRIRCALFSVLQTALRSFGFENLNLNNGAYLHIAGSKNNSIVEHLSTQLMYAITLLAGDDYPEPPASFKRLYPQLDKGELWALAAEEADVFSNELDMLRADNRRKEKEQLRLGHGYARFSLDSVSYVMTTSGPKPGEDLKYNQGREVAFAANSLVLAHTRFADLQMLARRQSVALERISIELSEAAVDLASTLEANQNGTKSEEKLKESLKQYRKLQEDFAKFRANLWFTSLPKHPTGEVFLHRLQEIARIHERMRDVQEEEESTANILRLEDSRLREEQREVENEEIKRAENWRNNLETIAAIAFPATLVYTITGGLKFTEDLDINLWWSIFNYAFPILLTLVITFAVLHWLAKGRGITAKEMVRKLSKNEGQEYIEPSMRSKPRK
>NZ_CP017812.1|WP_071164708.1|1970304_1971399_+|hypothetical-protein
MSKQKKHKQQALPRKVQNLSSADQRWISKYWAELAKLIPLDTEGVTRLVDLRVASLNLARSEEAAGAPAQSAKEMFGSPLLAAQSDCEELYGTNRSWAQQFPMYDRNTLIVWSLLLAVGTAYNSLHDPAGFPLTTLFAIPLYGSVLFFLMRFFQSFTWGRPAQTVTWLAALGGVALALFGLKQVHTSWTSEPVWHFNGSYLIAIPIAGVLTAVFLIRRGADSSRNVLDKLENLSREHWLARIRGLSRWKYGLPSSDRAKVLAEAEAASENQPKPSLELGVPDAFLREILLTHPTFLKSSIEARTRRGFLLGLGVMLAGAVALWKILGAYGFSWPLLLLLAFVLVLGLTWAWSLINADRRFMPRD
>NZ_CP017812.1|WP_071164707.1|1969955_1970327_+|PadR-family-transcriptional-regulator
MGKQQPSVSFPTEWLRGMTSLAVLAVLASGPSYGYAISTALAQAGLGQIKGGTLYPILTRLEADGFLASTWEHGPSGPGRKIFSLTELGESHLRDLQSQWRIFATNLDQLITQGGDSEQAKEA
>NZ_CP017812.1|WP_071164706.1|1969535_1969718_-|hypothetical-protein
MCRPVTCKKCGKTTWAGCGQHVDQVFKNVPVSQRCTCDKDAKKNGESSQNGGLFSRLFGR
>NZ_CP017812.1|WP_071165016.1|1969022_1969286_-|metal-sensitive-transcriptional-regulator
MNLDPQEVKPALMRLKRANGQLQAVIRMIEEGRSCEEVVTQIAAVGKAVDRAGYAIVAQSMRECLKADPSGQTLDEEKLEKMFLSLS
>NZ_CP017812.1|WP_071164705.1|1968480_1968966_+|glutathione-peroxidase
MTTFYDFSAKTLAGEEIPMENFRGKVVLVVNTASKCGFTPQLAGLQELHEKYADRGLAVLGFPCNQFGNQEPGEAEEISEFCSINYGVSFQMFAKVEVNGDGAHPLWQWLREQKGGVLGNKIKWNFTKFLIDPQGEVVDRFAPTTKPESLGEQIEKLLPQN
>NZ_CP017812.1|WP_071165015.1|1966908_1968276_+|protoporphyrinogen-oxidase
MPVVIIGGGITGLSVAAGLARRGKPFVILEAADRLGGQIRTIKRQGYTFEVGPNTGTVSTPEVAELFEFASSARLEVANETAKARWIWQQDRFRPLPSGLLSAATTPLFTFRDKLRVLGEPWRKRGTNPNETVGELAARRLGKSFVRNAVDPFIGGIYAGDPYRLVTRFALPKLYNLEANHGSFIRGSIAKMRTPKTDRDRKATKQVFSAEGGLTALVDALETALQPHGKILTGVQNVSAKMLAPHQWQVSFTHQGQAQELIAQTVVSTVRADLLAPIFPDLTGKLAPIESLRYAPVAEVVFGYDHLPSVNRKAFGGLVPSEENRDVLGILFPSSCFAGRTPHPDSALFTVFVGGMRRGQKLLSLAEDELVALARREVENMLQIPQGVSPDLVEVARYPKAIAQYEASTEQRLERISQLEYDYPGLILAGAIRDGIGLAHRITQGSQIGAMLAVN
>NZ_CP017812.1|WP_170299679.1|1965663_1966347_-|SDR-family-oxidoreductase
MDKPVALITGASAGIGRAIALELAEKYRLILVARHEEPLAELAAELPDATYLLADLTDKSSVEKLAGEVPQLDVLINNAGMEAMQNVDELDWETWQQVLTLNVIAPAELSRLFLPKLQASHGQIVMINSGAGRFSGPGMGAYAASKHALDAYTKALRAELRPDVRVIAVHPGRVDTPMQQRMFENAGKTYQATDHLRPESIATAVAYALSATKDACVEEVHVRPQQG
>NZ_CP017812.1|WP_071164713.1|1976954_1977515_-|LemA-family-protein
MSALAIIGIVFLVLVILLGVFLIVSYNSFVNSRELVKNAKSQIAVQMETRWDALTSLISATKKYSEHESKVLHDTVQQRTGVNKDSAVSELEKDESTFTSAFNRLLAVAENYPDLKASEVYKETMRQLGEYEENIRMARMVFNDTTTKYNRKVLVFPMSIVAAMFGFRELPYFQISEGKSSSPSWD
>NZ_CP017812.1|WP_071164714.1|1977675_1978473_-|CPBP-family-intramembrane-metalloprotease
MISLPARRFSSPILVALLCALVVIGTLALSALALSKPLPYTATNALSLLITLAVTIVVMWQTGTLSLLGFSTRGFSAFWTLGWPMLLMATVVATLALVFSGPATVPTIPVSALWFILGVALTATFEEALFRGTVLPLLLTSKQSTIGAVITSAVIFSVSHLLALLGGGNIAVVGTLTQVFYTFCMGVLLAAIMLTTQNLWVTISLHFVYNVLGDLGTLTEGVPQASTAPADMSLPVVVILVILAIPMLLVGLRTLKSYPKVRSPR
>NZ_CP017812.1|WP_071164715.1|1978866_1979676_-|hypothetical-protein
MTDKKIVCVIGPDLLLYALYAHSAYVDSAHLNFGEYVSRMTRMIQEIEGKKGDKIQVSNGVISSSWALARRDYLDLLAYPANRLLAQIRLNFDKFILQFDEINNSFRRNLESDNADSATGFFDNKDLEDITSINQQLFEISNSLAAFQSRFYYSFERFEARFHEYSSEAQIRYFKGNRESGYKISKLLDSYDPSGDDLFNLFITESTEFALDVLGQSAGNTKVGVLQLYFLTQRPTVLAQKLARYEDFFYKKLGNPPKFFDAELLGLKI
>NZ_CP017812.1|WP_071164716.1|1979698_1981624_-|DUF262-domain-containing-protein
MNVTTTSARGLFNNFRFVFPLYQREYSWEPEDVDDFLSSINLIIDRSKHSERRGDYQRLMGAIVLASVENSDNSNGVLEFNNEDEHSDSDHRMEVSIIDGQQRLTTIMMIASCLAKKAAELKRFLVARDIINPYISKVDSRAEEIVWSVRFSNVGANNWWYGHISSEFGKYRNDIELPEYESIESDSFTGPGYVTSSIEKMKKAISAVDNYFKNNVFDDDDSELTMSRIKDWLGALRYSIRFILWEEKDAADAFEIFEALNSKGQQLTTVDLLKMLTVGTAHKTEQEQVYNEWNNFIIAINGLGIRDSQIETFIRHIFISKHGPVSGKEVYFKFKEIYFNNSRDKKTRERFIDLLNASLDVYEFMWIKGADASLVQKALSWLVSDGEQGAEGGSKDESHVEYARIVLGACLRTLDEQVGLRILRPLFLCLARNISPETDPSAVKNVVMSAIGVYLRIVFKLAKGSSESNVVEIAVGNLCKEISDKSVINFATSQHLTSMRLHEVDPKEVLNELRGSNVYNVGVLNLLLRSVAFKTIFPPFEGNAIRVWQYGLEDASWSAFSSRPSYDPSLDFLGNNVLYYGIRRPRNTRSFEDVKIHYPEGIVDDTVVSFIVQNDEWNDDAIAKLSDYYVNEITQVWSKWF
>NZ_CP017812.1|WP_156982021.1|1981623_1982688_-|hypothetical-protein
MWEMLKNIEKDKRTWFTVSLLSLVVVIVFIIWLACISDNFLKSILQSLISIVPAYFIAFAIHFLTVASSYESERVLKESQKLLESQRGLVAMQVGQVLREQVKSAQDKDEILAILRESRVLFPITNESNEKVSSATELLLTEFRRNPLVPLPTVGMFDNPLSVNYSPDAESFNELYKADFGDEKVIKKNAVEQYFLTFSSSNAEIDLKELNGFLELLIHREQKSQNNSFTIYRNTHYLLEYLWNHKIGDVPIRNKLEGNVGYFIDVLVCKHQESKRSEKDSETYWEKLNCFVIKDLLGDKGEFKKEAIDFLDKIDKNLQNQIKGIILDRELFKMYDDEDASKLLSVFRNKNGVD
>NZ_CP017812.1|WP_071164718.1|1983119_1984757_-|alpha/beta-hydrolase
MTFAVSPAEERSQSTTKVGARPAARKPLRRRLTTLGAVLAVSATLAACSFGSDGSDAVQKTVEPTPSASPIPAGLESYYDQKLVWGNCDSSIEATKESTCATFKVPKNYANPSEGDLSITAVKYVKSGVKPSGDIYTNPGGPGGSAVDFVAENASHVFTQEILDKFAIVGMDNRGTRHSTPIECITPQEMDALLSENTQDVLTEAGLAHERQRMADMGKKCLEKSDTIKWVDTVSAARDLDVLRHLNGNNKLDYLGFSYGTFFGATYAELFPKNVGHMVLDGALDPSLNYDQVAEAQMVGFEKSLVHFADECNDGNPNCFLGRGEDGAKQIMAFVRALHQKPLRTGDPKRPLTENLAITAIMGSMYNQQWFPILTQGLENAMLKGNGQILLSMADQMNDRLDDGTYKGNSKESFFAVNALDYPIEGDMDTWQKQAKELLEKHPILGEQFMLGDALRQDWPVKPVGKRGPIKAEGAPPILVIGTTGDPATPLSMAQSLAEQLDKGVLLTVKGWNHTAYNSNANECVTQTVDDIFLKDQMPKQNKYC
>NZ_CP017812.1|WP_071164719.1|1984782_1986012_-|DNA-polymerase-III-subunit-delta'
MTVWDSLVGQDAAVKTLQEAALAARASLTGDQVDSRAMTHAWLLTGPPGSGRSKAAQAFAAALQCEHPTFPGCGECDSCRKVMPPKTEERPESRPIHPDVTWVDTDAVIISIDKVRELVHKAQDNPTLGKWRVIVVEDADRMATRTTNTLLKAIEEPPERTVWILCTPSPGDVLVTIRSRCRNVNLQIPPAKLVAEYMVKQGWTDDPKLALRCALAAQSHIGRAHGLLAEDDEDTIAQRRDLIIKPVSARNAGEAAVAAQRLVQNAKEAFEAKQKDADAQEIAALKEQLGIKKGENVPPSVRTMIRAREEAQKKRLTRLERDNLDRVMLDIMSFYRDVLTIQHQANVPIINADLEALVKEVATRTSADKTLRCMDAIAVARKRLAGNVTPLLVLEGMIMEFLPVEFPQP
>NZ_CP017812.1|WP_071164720.1|1986008_1986707_-|dTMP-kinase
MSETVPAIPTQTRLEPESRGLFISFEGGEAVGKSTQIAALTRKFESLGRNVVLTREPGGTDPFGVQVRQLVQHGVDLNPKAEALLYAADRSYHVATKIRPALAAGSVVITDRYLDSSVAYQGGGRDLGNDVYDLSLWATNGLLPDVTILLDADPVQALARREGATDRIEAEPLAFHQAVRSRYLQLAKENPQRFVVIDATGDIQTVSEQIWQAISEKAAALLSATEPGGGTR
>NZ_CP017812.1|WP_071164721.1|1986779_1987304_-|NUDIX-hydrolase
MSSWQTVWKAADFDLEMQRNQQGHHRVLAAKGKPGALAIALWEAQVLLVKQNREAVGEELWELPRGFGDQTDPDACATAVRELVEETGFEPIAGQAELLGELWIDSGLQANAVAVVKVPVQNGQAQHQTDGEVECAKWVPLAEIPRMIAKGQLRDSLTVAAFGLLWSTSWQDEK
>NZ_CP017812.1|WP_156982022.1|1987300_1989175_-|hypothetical-protein
MEGAGLGYDGGMSSPVSHSSANEQAALSYARFRPTAGRATVSVSDFDSFEQARTWLAYEPARALERFVAMARTAWLVSDAIYVDRNQLFDGICFLALGPDGFARALGLEPGQDLPLVVGCQPGQAQALTETMTLTNQSAITTASLEHPEPPRLTGETTSQILAKQFERLDRHFASAATVAWEYGRTPVADRKLPKLRAEGENPAAPALANMPGENFMPADRTVTRGDAAPESGGDLAPAPATATEGVSRETQALAQVLFDLEPRHQLPEPTTPGLFLRARLADPLFIAKARSEWAQAARTGRIVLEKWPDLSAVKDPEFWGSETGSNRQTSTQALVADLKNYLEHLPKKPEQTIFARSFVVAWAAEKIAQQELQPTEARAVIRWWSQLYENSVFAAREKEKAYLDQVARLAFTNTLLPADLALGKVGDPLSSAEREVEMRWGLRTKRRTRWEIAKARLAPKPVSTESPLRIEGEVIQAMQEMSPSQYHRLHNHPLVDRVVLQNGSSPRAWNDVILAIRDTMDDTRSWGQRLRSGIIRFTLLAIVAVILGLHDAGFLDNFFSNVAAGVLGTPKGGGIFDLVLWTLIAILVAFPYAELKEIWQMGPASMTSTMYVSTVENTRKARP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP017812_3	3.1\|1882581\|23\|NZ_CP017812\|CRISPRCasFinder	1882581-1882603	23	NZ_CP017812.1	1882626-1882648	0	1.0
NZ_CP017812_2	2.1\|1357289\|19\|NZ_CP017812\|CRISPRCasFinder	1357289-1357307	19	NZ_CP017812.1	522897-522915	2	0.895
NZ_CP017812_2	2.1\|1357289\|19\|NZ_CP017812\|CRISPRCasFinder	1357289-1357307	19	NZ_CP017812.1	1703022-1703040	2	0.895
NZ_CP017812_2	2.1\|1357289\|19\|NZ_CP017812\|CRISPRCasFinder	1357289-1357307	19	NZ_CP017812.1	478178-478196	2	0.895

1. spacer 3.1|1882581|23|NZ_CP017812|CRISPRCasFinder matches to position: 1882626-1882648, mismatch: 0, identity: 1.0

tgccggtacaggctttaccggtg	CRISPR spacer
tgccggtacaggctttaccggtg	Protospacer
***********************

2. spacer 2.1|1357289|19|NZ_CP017812|CRISPRCasFinder matches to position: 522897-522915, mismatch: 2, identity: 0.895

cggctctggctttggttcc	CRISPR spacer
cggctctggcttcggtgcc	Protospacer
************.*** **

3. spacer 2.1|1357289|19|NZ_CP017812|CRISPRCasFinder matches to position: 1703022-1703040, mismatch: 2, identity: 0.895

cggctctggctttggttcc	CRISPR spacer
cggctctggagttggttcc	Protospacer
*********  ********

4. spacer 2.1|1357289|19|NZ_CP017812|CRISPRCasFinder matches to position: 478178-478196, mismatch: 2, identity: 0.895

cggctctggctttggttcc	CRISPR spacer
cggctcaggctttggatcc	Protospacer
****** ******** ***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	MT310859	Mycobacterium phage MarkPhew, complete genome	22343-22373	6	0.806
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	MH910042	Mycobacterium phage Scarlett, complete genome	22467-22497	7	0.774
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	MH910038	Mycobacterium phage LeMond, complete genome	22464-22494	7	0.774
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	MH910039	Mycobacterium phage Oscar, complete genome	22465-22495	7	0.774
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	MK376955	Mycobacterium phage KiSi, complete genome	22393-22423	7	0.774
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	217328-217358	8	0.742
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	CP007643	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence	184578-184608	8	0.742
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	MH001459	Mycobacterium phage KittenMittens, complete genome	14049-14079	8	0.742
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	NC_021307	Mycobacterium phage Severus, complete genome	14048-14078	8	0.742
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	NZ_CP021821	Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence	44848-44878	9	0.71
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	728387-728417	9	0.71
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	KX349297	Cyanophage S-RIM44 isolate W2_10_0709, complete genome	42773-42803	9	0.71
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	KU594607	Cyanophage S-RIM44 isolate W2_07_0710, complete genome	42773-42803	9	0.71
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	KX349295	Cyanophage S-RIM44 isolate Sn_08_0709, complete genome	42773-42803	9	0.71
NZ_CP017812_4	4.1\|1975276\|31\|NZ_CP017812\|CRISPRCasFinder	1975276-1975306	31	KX349292	Cyanophage S-RIM44 isolate Np_05_0604, complete genome	42773-42803	9	0.71

1. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to MT310859 (Mycobacterium phage MarkPhew, complete genome) position: , mismatch: 6, identity: 0.806

---tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
cgccagag---ccaccgccgccggggaagctgcc	Protospacer
   .****   ********.****.*********

2. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to MH910042 (Mycobacterium phage Scarlett, complete genome) position: , mismatch: 7, identity: 0.774

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
caccggaaccgccgccaccggggaagctgcc	Protospacer
.*  *  ***.**********.*********

3. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to MH910038 (Mycobacterium phage LeMond, complete genome) position: , mismatch: 7, identity: 0.774

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
caccggaaccgccgccaccggggaagctgcc	Protospacer
.*  *  ***.**********.*********

4. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to MH910039 (Mycobacterium phage Oscar, complete genome) position: , mismatch: 7, identity: 0.774

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
caccggaaccgccgccaccggggaagctgcc	Protospacer
.*  *  ***.**********.*********

5. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to MK376955 (Mycobacterium phage KiSi, complete genome) position: , mismatch: 7, identity: 0.774

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
caccggaaccgccgccaccggggaagctgcc	Protospacer
.*  *  ***.**********.*********

6. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 8, identity: 0.742

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
cgacgccaccaccgccaccggcgaagccttc	Protospacer
... ***************** *****. .*

7. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to CP007643 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence) position: , mismatch: 8, identity: 0.742

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
gtgctccaccacggccaccggagaggctcgc	Protospacer
  *  ******* ***********.***  *

8. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to MH001459 (Mycobacterium phage KittenMittens, complete genome) position: , mismatch: 8, identity: 0.742

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
ccgagccaccaccgccaccgccgaacattcg	Protospacer
. ******************  ***  * *

9. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to NC_021307 (Mycobacterium phage Severus, complete genome) position: , mismatch: 8, identity: 0.742

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
ccgagccaccaccgccaccgccgaacattcg	Protospacer
. ******************  ***  * *

10. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to NZ_CP021821 (Sinorhizobium meliloti strain M162 plasmid accessoryA, complete sequence) position: , mismatch: 9, identity: 0.71

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
tcccgccgccaccgccaccggagaaggaaat	Protospacer
*   ***.******************  . .

11. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.71

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
tcccgccgccaccgccaccggagaaggaaaa	Protospacer
*   ***.******************  .

12. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to KX349297 (Cyanophage S-RIM44 isolate W2_10_0709, complete genome) position: , mismatch: 9, identity: 0.71

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
ctccaccaccaccgccaccgccgaagctaca	Protospacer
.   .***************  ******.*

13. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to KU594607 (Cyanophage S-RIM44 isolate W2_07_0710, complete genome) position: , mismatch: 9, identity: 0.71

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
ctccaccaccaccgccaccgccgaagctaca	Protospacer
.   .***************  ******.*

14. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to KX349295 (Cyanophage S-RIM44 isolate Sn_08_0709, complete genome) position: , mismatch: 9, identity: 0.71

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
ctccaccaccaccgccaccgccgaagctaca	Protospacer
.   .***************  ******.*

15. spacer 4.1|1975276|31|NZ_CP017812|CRISPRCasFinder matches to KX349292 (Cyanophage S-RIM44 isolate Np_05_0604, complete genome) position: , mismatch: 9, identity: 0.71

tagagccaccaccgccaccggagaagctgcc	CRISPR spacer
ctccaccaccaccgccaccgccgaagctaca	Protospacer
.   .***************  ******.*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

226229 : 279345

Erysipelothrix_phage(38.1%)

holin,portal,tail,capsid,head,terminase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071163475.1\|226229_226652_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_071163476.1\|226889_228563_-	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA
WP_071163477.1\|228683_231419_-	FtsX family ABC transporter permease	NA	NA	NA	NA
WP_083378960.1\|231420_232389_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-35	35.2
WP_071163478.1\|232581_234003_-	hypothetical protein	NA	NA	NA	NA
WP_083379214.1\|233995_234832_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-26	35.3
WP_083379215.1\|235472_236435_+	hypothetical protein	NA	NA	NA	NA
WP_071163480.1\|236498_237176_+	response regulator transcription factor	NA	NA	NA	NA
WP_156981953.1\|237183_237375_+	hypothetical protein	NA	NA	NA	NA
WP_071163482.1\|237846_238554_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_071163483.1\|238597_239491_-	hypothetical protein	NA	NA	NA	NA
WP_071163484.1\|239621_239930_-	hypothetical protein	NA	NA	NA	NA
WP_071163485.1\|240168_240711_+	hypothetical protein	NA	NA	NA	NA
WP_071163486.1\|240707_241550_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_071163488.1\|242367_244449_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.2e-06	22.5
WP_071163489.1\|244445_246185_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	4.2e-12	27.5
WP_071163490.1\|250215_250809_+	recombination protein RecR	NA	NA	NA	NA
WP_156981954.1\|250981_252157_-	hypothetical protein	NA	NA	NA	NA
WP_071163492.1\|252143_253286_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.8e-25	33.7
WP_071163493.1\|253400_254084_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-31	37.6
WP_071163494.1\|254102_255155_-	ABC transporter permease	NA	NA	NA	NA
WP_071163495.1\|255530_257927_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	9.5e-273	63.4
WP_170299689.1\|258104_258383_+	hypothetical protein	NA	NA	NA	NA
WP_071163497.1\|258771_260376_-	recombinase family protein	Q6DMS5	Streptococcus_phage	1.9e-112	44.0
WP_071163498.1\|260372_261674_-	recombinase family protein	M1NSJ1	Streptococcus_phage	1.6e-61	37.5
WP_071163500.1\|262487_263267_-	N-acetylmuramoyl-L-alanine amidase	A0A222ZH75	Arthrobacter_phage	1.1e-28	55.2
WP_156981955.1\|263285_263444_-	hypothetical protein	NA	NA	NA	NA
WP_071163501.1\|263436_264012_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	9.3e-25	46.3
WP_083378966.1\|264194_264629_-	DUF1617 family protein	NA	NA	NA	NA
WP_071163502.1\|264649_267412_-\|tail	phage tail protein	A0A1C8E983	Bacillus_phage	1.2e-74	41.3
WP_071163503.1\|267408_268095_-	hypothetical protein	NA	NA	NA	NA
WP_071163504.1\|268132_270808_-	tape measure protein	A0A2K9V3J7	Faecalibacterium_phage	3.3e-40	39.2
WP_071163505.1\|270875_271211_+	DsrE family protein	NA	NA	NA	NA
WP_071163506.1\|271444_271864_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	7.0e-30	55.3
WP_071163507.1\|271886_272477_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	1.1e-68	66.3
WP_071164865.1\|272527_272866_-	hypothetical protein	NA	NA	NA	NA
WP_071163508.1\|272871_273303_-	hypothetical protein	A0A2K5B292	Erysipelothrix_phage	4.6e-29	46.8
WP_156981956.1\|273295_273631_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_071163510.1\|273631_273961_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	1.5e-27	59.6
WP_071163511.1\|274000_275221_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	1.4e-126	58.1
WP_083379216.1\|275290_276061_-\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	1.3e-58	55.2
WP_071163512.1\|276023_277373_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	2.4e-156	65.6
WP_071163513.1\|277423_277744_+	TfoX/Sxy family protein	NA	NA	NA	NA
WP_071164867.1\|277740_279345_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	5.2e-243	77.4

DBSCAN-SWA_2

1716178 : 1751666

Erysipelothrix_phage(58.33%)

holin,portal,tail,capsid,head,terminase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071164540.1\|1716178_1716742_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	3.7e-26	46.5
WP_071164541.1\|1716923_1717358_-	DUF1617 family protein	NA	NA	NA	NA
WP_071164542.1\|1717377_1720140_-\|tail	phage tail protein	A0A1C8E983	Bacillus_phage	9.5e-75	42.2
WP_071164543.1\|1720136_1720823_-	hypothetical protein	M1PFK1	Streptococcus_phage	5.9e-10	26.2
WP_071164544.1\|1720836_1723509_-	tape measure protein	A0A2K9V3J7	Faecalibacterium_phage	3.3e-40	39.2
WP_071164545.1\|1723627_1724350_+	hypothetical protein	NA	NA	NA	NA
WP_170299674.1\|1724551_1724971_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	2.2e-28	53.0
WP_071164546.1\|1724994_1725588_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	2.7e-72	68.4
WP_156982006.1\|1725642_1725960_-	hypothetical protein	NA	NA	NA	NA
WP_071164548.1\|1725986_1726418_-	hypothetical protein	A0A2K5B292	Erysipelothrix_phage	2.3e-28	46.8
WP_156982007.1\|1726410_1726716_-	hypothetical protein	NA	NA	NA	NA
WP_071164550.1\|1726764_1727085_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	1.7e-28	60.6
WP_071164551.1\|1727132_1728350_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	1.8e-131	59.7
WP_083379140.1\|1728407_1729199_-\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	5.5e-60	60.5
WP_071164552.1\|1729164_1730502_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	1.8e-159	65.1
WP_071164553.1\|1730597_1730843_+	HXXEE domain-containing protein	NA	NA	NA	NA
WP_071164554.1\|1731267_1731939_-	hypothetical protein	NA	NA	NA	NA
WP_071164555.1\|1731951_1733286_-	hypothetical protein	NA	NA	NA	NA
WP_071164556.1\|1733303_1734047_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-22	32.4
WP_071164557.1\|1734060_1734462_-	hypothetical protein	NA	NA	NA	NA
WP_071164987.1\|1734564_1736169_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	2.8e-244	77.0
WP_071164558.1\|1736352_1736907_-	hypothetical protein	NA	NA	NA	NA
WP_071164559.1\|1737129_1737408_-	hypothetical protein	NA	NA	NA	NA
WP_170299699.1\|1737577_1737826_-	DUF4314 domain-containing protein	A0A127AWR5	Bacillus_phage	3.2e-06	38.6
WP_071164561.1\|1738700_1739960_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	2.6e-152	63.5
WP_071164562.1\|1739956_1741228_-	methionine adenosyltransferase	A0A2K5B278	Erysipelothrix_phage	2.5e-99	52.1
WP_071164563.1\|1741314_1741881_-\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	1.3e-47	52.4
WP_071164564.1\|1741913_1742249_+	hypothetical protein	NA	NA	NA	NA
WP_083379141.1\|1742348_1742699_-	hypothetical protein	NA	NA	NA	NA
WP_071164566.1\|1742745_1743117_-	HNH endonuclease	A0A2D1GNP5	Pseudomonas_phage	1.3e-16	37.1
WP_071164567.1\|1743259_1743739_-	hypothetical protein	NA	NA	NA	NA
WP_071164568.1\|1743735_1745100_-	DEAD/DEAH box helicase	A0A1L6BZE2	Pasteurella_phage	3.7e-149	56.8
WP_071164569.1\|1745080_1745359_-	VRR-NUC domain-containing protein	A0A1S7FZ22	Listeria_phage	7.1e-15	44.4
WP_156982008.1\|1745596_1746070_-	hypothetical protein	NA	NA	NA	NA
WP_071164570.1\|1746138_1748418_-	primase C-terminal domain-containing protein	A0A1B0RXC5	Streptococcus_phage	3.6e-181	43.9
WP_071164571.1\|1748414_1748927_-	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	5.7e-10	34.1
WP_071164572.1\|1749049_1751005_-	DNA polymerase	A0A2K5B2B0	Erysipelothrix_phage	1.1e-202	53.9
WP_071164573.1\|1751096_1751666_-	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	3.0e-60	63.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017812

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection