CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP017867	Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence	0 crisprs	NA	0	0	0
NZ_CP017866	Campylobacter coli strain YF2105 plasmid pCCDM105L, complete sequence	1 crisprs	NA	0	1	0
NZ_CP017865	Campylobacter coli strain YF2105 chromosome, complete genome	1 crisprs	csa3,cas14j,DEDDh	1	0	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017866_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017866_1

40944-41039

Orphan

Consensus_repeat	Method
AGAAATCATTACATTTAAGTCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017866_1

>merge|NZ_CP017866|1|40944-41039|CRISPRCasFinder
AGAAATCATTACATTTAAGTCAATTGTTTTTTTAAAGTCCCTATTTTCCATATGTTATTTTCGTAAAAATGTCAAAAATCATTACATTTAAGTCAA

>NZ_CP017866|1|1|40944-41039|CRISPRCasFinder
AGAAATCATTACATTTAAGTCAA	TTGTTTTTTTAAAGTCCCTATTTTCCATATGTTATTTTCGTAAAAATGTC
AAAAATCATTACATTTAAGTCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017866.1\|WP_011187232.1\|34939_36328_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_CP017866.1\|WP_002779624.1\|44616_44940_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017866.1\|WP_002803413.1\|43607_44222_-\|resolvase	unknown	unknown	gnl\|CDD\|184041
NZ_CP017866.1\|WP_002826068.1\|37382_37994_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017866.1\|WP_057991840.1\|44218_44626_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225846
NZ_CP017866.1\|WP_057097498.1\|38769_39996_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226990
NZ_CP017866.1\|WP_002779625.1\|45109_45373_+\|TrbC/VirB2-family-protein	unknown	unknown	gnl\|CDD\|368210
NZ_CP017866.1\|WP_002823273.1\|40499_40775_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017866.1\|WP_002779777.1\|36327_36879_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017866.1\|WP_002801148.1\|41266_41485_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP017866.1\|WP_002790340.1\|41477_41681_+\|addiction-module-toxin,-HicA-family	unknown	unknown	gnl\|CDD\|224638
NZ_CP017866.1\|WP_071306738.1\|28389_34188_+\|helicase	unknown	unknown	gnl\|CDD\|226993
NZ_CP017866.1\|WP_002790342.1\|41684_43478_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|238545
NZ_CP017866.1\|WP_043012951.1\|37997_38651_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017866.1\|WP_021034322.1\|40127_40421_+\|EexN-family-lipoprotein	unknown	unknown	unknown
NZ_CP017866.1\|WP_011271766.1\|34209_34914_-\|GNAT-family-N-acetyltransferase	unknown	unknown	unknown
NZ_CP017866.1\|WP_002809140.1\|37072_37354_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP017866.1\|WP_011187232.1\|34939_36328_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	2.31611e-05
NZ_CP017866.1\|WP_002790340.1\|41477_41681_+\|addiction-module-toxin,-HicA-family	gnl\|CDD\|224638	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family [General function prediction only].	6.85308e-14
NZ_CP017866.1\|WP_002803413.1\|43607_44222_-\|resolvase	gnl\|CDD\|184041	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase.	1.1543e-37
NZ_CP017866.1\|WP_071306738.1\|28389_34188_+\|helicase	gnl\|CDD\|226993	COG4646, COG4646, DNA methylase [Transcription / DNA replication, recombination, and repair].	9.49455e-73
NZ_CP017866.1\|WP_057991840.1\|44218_44626_-\|hypothetical-protein	gnl\|CDD\|225846	COG3309, VapD, Uncharacterized virulence-associated protein D [Function unknown].	2.372e-09
NZ_CP017866.1\|WP_057097498.1\|38769_39996_+\|hypothetical-protein	gnl\|CDD\|226990	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown].	7.70945e-28
NZ_CP017866.1\|WP_002779625.1\|45109_45373_+\|TrbC/VirB2-family-protein	gnl\|CDD\|368210	pfam04956, TrbC, TrbC/VIRB2 family. Conjugal transfer protein, TrbC has been identified as a subunit of the pilus precursor in bacteria. The protein undergoes three processing steps before gaining its mature cyclic structure. This family also contains several VIRB2 type IV secretion proteins. The virB2 gene encodes a putative type IV secretion system and is known to be a pathogenicity factor in Bartonella species.	1.41173e-06
NZ_CP017866.1\|WP_002790342.1\|41684_43478_+\|AAA-family-ATPase	gnl\|CDD\|238545	cd01125, repA, Hexameric Replicative Helicase RepA. RepA is encoded by a plasmid, which is found in most Gram negative bacteria. RepA is a 5'-3' DNA helicase which can utilize ATP, GTP and CTP to a lesser extent.	6.71147e-14
NZ_CP017866.1\|WP_002801148.1\|41266_41485_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	2.74784e-11

>NZ_CP017866.1|WP_002823273.1|40499_40775_-|hypothetical-protein
MCKIIKYLDYARLNTLEKLYFDLTIMLIVTFLSFLFLVFEFFIYENIAVFFQDCFLMSVIFIIGMIGLFHTCKGLRKYKEILKSNKREEFI
>NZ_CP017866.1|WP_021034322.1|40127_40421_+|EexN-family-lipoprotein
MKNTIKLALLGAVITGVFSACSSEPKTVQYYEDPKNATELEAKIKECDKNANSAKTDTECANAYEARYSKSFDYKPQVSTKELMQKAREQNKNMELK
>NZ_CP017866.1|WP_057097498.1|38769_39996_+|hypothetical-protein
MPQKRIYLYVPFKDKEKAKSLGAMWDDKEKKWFAPKTLDKNIFSQWLYPHQKKEFSFDENEVLTAFKSALENQGLIIEGLPIMDGKIHRVKTTNDKGRELSGAYSGFLDDYPAGFVQNFKTGIKENWKMPIEKNQSNNIKNSQKLHEQIKKDQELREKEILTLQEKTALKLEDEYNNAKWANSNHAYLKKKGFDENFYLKQDKMGSLLIPLKDENGKLWSVQRIFPNGDKIIGVIKTQEEKDQGVEYLAKKQGCFHIIGAKSLEHCKEFIITEGFATAATIYKALNKPVIMGVDAGNLSKIVETLKNKFENTPITLIADNDKKRELKGLSNVGVETAKEIQQRFSDIKVIIPKISDQEAGQGVSDFNDIFLNKGLDEVKKQLNFIDFHNKLKAFKSMEKTQPEKEITR
>NZ_CP017866.1|WP_043012951.1|37997_38651_+|hypothetical-protein
MNNTINFNELFSQIRLSSYDNNIVKHYDNLKCVGKITPKLATLEIILRNKLDNKLSEKDNDWIKNSNDEKIKKSKEEIEHREKNRILSHHQYLSRISLGTIIHLIKENKLQNSIMDLKNINFRNYNQYNRNFFFENGIKLRFRNTHKVDIVLSLLQNLRNRSYHWENILKTTEKNGKHYPRLTTKIKNTHIGVDPQKIDFFLSDLIKTFNEKILEYC
>NZ_CP017866.1|WP_002826068.1|37382_37994_+|hypothetical-protein
MEKDYKIKVTDVSELNEQYKEAIQEGTYEGEDVNKFFNTIKTFDVAESLLKKDFSNQYIKFDIITDKEKIPLNIRLGDKNFQKGIEHLINIGSSKLIKENINPEIKKDLNNRLGIYKPKIYDEMLDGTFKAIKNLSEVANKDVGVMILEFANSYSETREKFEKKQINKSSFFKEKMNEFFKKKLNKILPDREISNEKTYSRSR
>NZ_CP017866.1|WP_002809140.1|37072_37354_+|hypothetical-protein
MFKESKLIEELKREYDEKLKKLRQKEKENKERIYKKFSSALFKDFEINEDFKNEFNLLVEKFDCKNTKNILDKINNLYDFNHRNDKIDTAKKQ
>NZ_CP017866.1|WP_002779777.1|36327_36879_-|hypothetical-protein
MNKNNNCVIKVSKDDKIILEYIKSETNASYSKIISILLKKFNSCDTDEKNKINDEISKNKFYTSDENKIIKLKLTENEVNILKEISKNTGFSSITKQAKFLLLNSIKNEKLFTNIEIDEFIKTRTEINAIGKNIYQLLKILRSGNSVKINENNLNKTMDNIRDKIDILSDQLGAIIEKNNERI
>NZ_CP017866.1|WP_011187232.1|34939_36328_-|relaxase/mobilization-nuclease-domain-containing-protein
MSRSIRIFDDEIIAKKVFTKIENASKLPLNYINKNKDKYTKDIKTGKLVSKNMFRKNTEVVVKITSGSKNSQALSKHLDYISRDGNVELITNDFDIYAGEDEILEVKRIFKNEGSPIPLYKEGAKEKRHTINMVFSMKEHSTTPKEKLQQAVITTLKRMYPNNFFVVAFHNDTDNPHCHVCLKVADKNGKRINPKKADLANLRAEFANALNELGIEAKATNKKQREVEINQEFSVKLNTNNEINQAPKIKMHYYQVMDFGEANYQFSTDKNAKKSYYVSYKTKKGITTIWGQDLERVVRENKVLRGEYARFKIVGQEEYEIKRKAKINNKWQEVIKTLKKPIWEVSVIGREKDLKQINKAKTTKKYKIIQDKGVNNERDYTKQYRQRVLQELGNKSTIRRETAQERNSMRILSKQPMVHNTKRTQMLLHINALNQLQQGKRGRTDNSLRWTSARNNEITRNG
>NZ_CP017866.1|WP_011271766.1|34209_34914_-|GNAT-family-N-acetyltransferase
MKQEIYTSKFYISKRNGKEVCFKLDFEIKAFEENQKFYYVEIYAIIDYQYLKNEIAVIPNTNKNRNHWILRYDFNSWNFHSSIMLHSDYRSLGIGTFVINKMLEIALNYIPTARLSGKLSAVDEVKLENHIRRDKLYKNLGFVFNENNIGFSINSISNLKIRKDFDYIQEVRIFDMCNQLAELQYLKAGNDKLLKIYKEDFYKEKSKNDTLRARIKLMSFVLIALAVWIVYLLK
>NZ_CP017866.1|WP_071306738.1|28389_34188_+|helicase
MSKKTKRQIEDEKDYGGRSLFDLIELEFSQGEENEQQNRELSEHREVTDNIERTSISSNTPSVDRQENSTIQLDNTREMGRVLSEHNQESRNVRSNDTSIATNTNGISNLGEQRSRQEERTGANRYGDTSRRANKSQSIHSDRTPNLFSFISRNDDERQGTDAARSYNQQSVLETATRNDGYERRSLKSGQKLDFISDDEIYLGSLKDRFQKNLQAIKLSKTIEQENRYATKQEQEILNKFSGWGGIPQAFDHQNKEWEKEFKELISTLDYAEYEKAKTSTLDAFYTPKIIIDTIYQGLNQLGFNNDGHTKEIFEPSAGIGSFLSYAKNYSDKYHFTCVELDTISANILKHLHPNQTIYNKAFQHHLFDKPYDAFIGNPPFGQKKILDLNDTTLNKTSVHNYFIGNAIKNLKEDGIAAFVVSSYFLDSKNSTIRNYIAEQATFLGAVRLPNNAFKKRANTEVTTDIIFFKKGKDLNIDKSWLESVEYYDDRFDEAEKRGMHPDVFNDFRINEYFKNNPQNILGKMNIKSSQYGYSLECLDDGRDLKIALENFTKTLPKNIYKYQETKIKLSYYRIDRESPEYEKYSKTLSKLKDGNYFEYNNEIYMKIRSDDELVFSKPVLNEHDTRRIKKLIALRDQFNTLIEYEKNESNDLLVENQRKSLNKLYDEFVAKEGYLNRDANKKAFREDVEANKILALEKNYSSGISKSVALKEGIDPIAPSATKADIFFKRTINAQKEIKISTPKEALIASINEYGRIDLKFLETNLNQPLEETLKSLEQDRLIFKDHKNPANYVLAEKYLSGNVKAKHKEVKKLVEDGFNEFVNNLESLEQVLPKDLKAVDISISLGTTWIPIKYYKQFIEETLQITPKDYDLFLMEKTGEWSLKGFGYSLSSYIRSEYATERIGCFDLLEHGLLRKPIRIYDKKLDPSGKEIRELNPKETAIANSKLENLKNEFIEWIYKDYDRRTDLENIYNERFNTNIEPRYNGEHLELPNFNANIKLKKHQKNAIYRAIQENSIIFDHQVGAGKTLVAICSVMEQKRMGLLNKPLIVVPNHLARQWNDEFYHAYTNANILVATNDDLKKDNREKFFSKITTNNFDAIIMTHSQFKLIPAPYEVIKKQYEEDINILEQTLEKKRNDDNVMRYSVKDLEKRIENFKVKLSDLQTTHKKSKAIDFSELGIDALIIDEAHEFKNLLITTSMGDISGLGNLKGSQKAYDLYSKTQYIHEQNKKLYFLTGTPISNSITELYTLQRYIQPNILKEKGIQAFDSWASTFGEVTNAWELDSSGINYKIVARFNKFKNVPELSTMYKSVADIVTNNDIMKYQKDFVPKLYNDKPINIVAPRSEEIAEFIGIQDENGRWNEGSIVWRMEHQQDDITRNNLLACTTDARKAGLDFRLINPHCDDYANSKINKLIENVFNEYNAWNDDKGTQLIFCDLSTPKQHSQKVALNGNIATPNLNKEEFVNINEAIEQTEEENSKSLDELLAEQAKFDVYTDILKKLVAKGIPQNEIRFIHDAKTDLQKGQLFADMNSGKARILIGSTQKMGAGTNVQKRIVALHHLDCPWRPSDLEQRSGRVIRQGNELFMRDPQNFRVKEFRYATERTYDARMWQVIESKARSIEQFRKAGADVRTLEDVTSGAADAAEMKAEATGNPLILLQVQLNSDLRQEEMLYSGYKRQIHNNEESLITNLSKIELLKKDIAKMEILNSIIKENNSEHFQGKYYINDDEKDFIVFKNDTSDLNKSRQAELERNFEKIVKTIADDYQKEYKVLEFKGLLISGERTDLNTLNFYVSTTDGKTIIEPENLIYKRDEKTFFKLESYVNFGGFVKRLNNFYNDLEKFTQLNKNKIENLEKEIVELKSITGDNTPKYKRKDYLEALREDNRIIMDEIEKMSKQKNYKSDFLPKSAKILEDLNKNNNIQKEYDIEI
>NZ_CP017866.1|WP_002801148.1|41266_41485_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MLLNIIIEKDQDGYFARILELEGCVSQGNTYEEALVNIKEAGELYLESLANEEKRIIENKTTSIIPMVLANA
>NZ_CP017866.1|WP_002790340.1|41477_41681_+|addiction-module-toxin,-HicA-family
MPELPRMTAKEAEKLLLQNDFSIDRQKGSHRIYKKGLYRMVIPHHSGEILHPKIIKQLFEIIEVAKD
>NZ_CP017866.1|WP_002790342.1|41684_43478_+|AAA-family-ATPase
MPKRNTIETITLGLFSDEDVSIICEDTIKLERGSVAVLSGNSEVGKSFLALKVCANAINDGLKPFFWSVEDKNKAILERIKNIESFYSFNTAELEFSNELPKINKEPINCLKEELNELADCDLIVLDTFSAFFSTLGFKDQNNQNDVQNFFNILTDIAKSNNQAILLLHHLDKKGESLMGSSVIINAPRLVYKLSFEKGEDKNSTTYRLLEVLKDNNNINAGEFQKTIKVLQNSSIDEPSIVNLRANSIDSNTLEIINKKDISAVSVNELAKGYVTMNENRGVFYLSSRKLTDTNFYKVFKENDNKIDFKMTGANGSSYAISLKNSLLTQTHRNILDALFLYIKKNVDTSVIKKYQENFWDMEVRLEPYKFLKQYLNKNSNNYSWLKQKFTEISRFAYDLAFTQNVEDKDKKTITQRDKGILMFDSVERITKENGTIVSVFVLTVRREYIKKLETESTLSYDDDLSKILINLNSLVAQDLIRFLTSFPDKKILSYSEFCEIKAYKFYKENSIISRQKKEIIKLKDKLIEFGINIYGKGVEFADYDDEFFHNKYKNENDLFFIYQSNNKVKRYIKRDDPMNQLNTKDNRFLLQKSLFD
>NZ_CP017866.1|WP_002803413.1|43607_44222_-|resolvase
MNIAYIRVSTNKQELDSQKLEIMEYCHKNNIILDEILEVKISSTKSQEKRKIKDLKQRLQSGDLLIATELSRLGRSMLEIINLVLEFNANNINFLFLRQRELSNFNNPSSKLILSIYAYLAENERDLISQRTKAGLENAKASGKKLGRPKGSLNSIYDKDIDKIQTLLDKDLSIRSIWKLFYKDSGKTYDGLLWFIKKRKLKQK
>NZ_CP017866.1|WP_057991840.1|44218_44626_-|hypothetical-protein
MGINRKAINFDLSTKSLEKYFKDTREPYSLIKKFMLENGFEHRQYSGYTSKEPIDERRVARIVTKLAKKFTWFGECVKEFDITEIGEQYSLKDTIQNLCIKEINKQAGYNKDFHGKFKEFIQKTPKNQKLKDLER
>NZ_CP017866.1|WP_002779624.1|44616_44940_-|hypothetical-protein
MAYPLLGTRIVLDEEKILKEGKYNLEDMYKMIDEYAKESGMIKINKETYHCKGDKYDLGCMALFIYKYLIDSEWFTKNAKEWIWISEKEGNSDLISASKAEGEGIWE
>NZ_CP017866.1|WP_002779625.1|45109_45373_+|TrbC/VirB2-family-protein
MKIKLLSLILLSPIFVFAAGGIDKVNTFMENLSTALYALGAVLLTIAFMWGGSKIMFQGQTLREVAPIFIGGVIFGSASAIAGYIIT

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_KJ646012	Campylobacter jejuni strain 11601MD plasmid p11601MD, complete sequence	39947-39996	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP045793	Campylobacter coli strain CFSAN032805 plasmid p1CFSAN032805, complete sequence	2492-2541	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NC_017282	Campylobacter jejuni subsp. jejuni S3 plasmid pTet, complete sequence	33083-33132	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP013035	Campylobacter coli strain HC2-48 plasmid pccdm1, complete sequence	5473-5522	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP007752	Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence	6604-6653	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP014745	Campylobacter jejuni strain OD267 plasmid pCJDM67 L, complete sequence	72201-72250	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP023546	Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence	3064-3113	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017026	Campylobacter coli plasmid pCC14983A-1, complete sequence	77864-77913	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP011017	Campylobacter coli strain FB1 plasmid pFB1TET, complete sequence	25209-25258	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP044168	Campylobacter jejuni strain AR-0415 plasmid pAR-0415, complete sequence	11714-11763	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP040609	Campylobacter sp. CFSAN093226 plasmid unnamed, complete sequence	4066-4115	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017861	Campylobacter jejuni strain TS1218 plasmid pCJDM218, complete sequence	11000-11049	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP043764	Campylobacter jejuni strain BfR-CA-14430 plasmid pBfR-CA-14430, complete sequence	30424-30473	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP007750	Campylobacter jejuni subsp. jejuni M129 plasmid pTet-M129, complete sequence	5167-5216	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP048762	Campylobacter jejuni strain ZS004 plasmid pCJFEX, complete sequence	17612-17661	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_MK541988	Campylobacter coli strain CVM N61740F plasmid pN61740F, complete sequence	9361-9410	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_MK541989	Campylobacter coli strain CVM N61925F plasmid pN61925F, complete sequence	33146-33195	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NC_022354	Campylobacter jejuni subsp. jejuni 00-2544 plasmid unnamed, complete sequence	34776-34825	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_KX686749	Campylobacter coli strain Tx40 plasmid unnamed, complete sequence	16533-16582	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP007182	Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence	17073-17122	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NC_006134	Campylobacter coli plasmid pCC31, complete sequence	20905-20954	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP007180	Campylobacter coli RM5611 plasmid pRM5611_48kb, complete sequence	20269-20318	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP010073	Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj1, complete sequence	8503-8552	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP023544	Campylobacter jejuni strain CFSAN032806 plasmid pCFSAN032806, complete sequence	18106-18155	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	CP002030	Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence	18942-18991	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017418	Campylobacter jejuni strain MTVDSCj13 plasmid pMTVDSCj13-1, complete sequence	13094-13143	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017419	Campylobacter jejuni strain MTVDSCj16 plasmid pMTVDSCj16-1, complete sequence	13120-13169	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017866	Campylobacter coli strain YF2105 plasmid pCCDM105L, complete sequence	40967-41016	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017879	Campylobacter coli strain BG2108 plasmid pCCDM108L, complete sequence	4231-4280	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017416	Campylobacter jejuni strain MTVDSCj07 plasmid pMTVDSCj07-1, complete sequence	13533-13582	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017872	Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence	6212-6261	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP020775	Campylobacter jejuni strain YH002 plasmid pCJP002, complete sequence	21028-21077	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NC_022355	Campylobacter coli CVM N29710 plasmid pN29710-1, complete sequence	18073-18122	0	1.0
NZ_CP017866_1	1.1\|40967\|50\|NZ_CP017866\|CRISPRCasFinder	40967-41016	50	NZ_CP017869	Campylobacter coli strain MG1116 plasmid pCCDM116L, complete sequence	18541-18590	1	0.98

1. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_KJ646012 (Campylobacter jejuni strain 11601MD plasmid p11601MD, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

2. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP045793 (Campylobacter coli strain CFSAN032805 plasmid p1CFSAN032805, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

3. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NC_017282 (Campylobacter jejuni subsp. jejuni S3 plasmid pTet, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

4. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP013035 (Campylobacter coli strain HC2-48 plasmid pccdm1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

5. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP007752 (Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

6. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP014745 (Campylobacter jejuni strain OD267 plasmid pCJDM67 L, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

7. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP023546 (Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

8. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017026 (Campylobacter coli plasmid pCC14983A-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

9. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP011017 (Campylobacter coli strain FB1 plasmid pFB1TET, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

10. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP044168 (Campylobacter jejuni strain AR-0415 plasmid pAR-0415, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

11. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP040609 (Campylobacter sp. CFSAN093226 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

12. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017861 (Campylobacter jejuni strain TS1218 plasmid pCJDM218, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

13. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP043764 (Campylobacter jejuni strain BfR-CA-14430 plasmid pBfR-CA-14430, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

14. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP007750 (Campylobacter jejuni subsp. jejuni M129 plasmid pTet-M129, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

15. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP048762 (Campylobacter jejuni strain ZS004 plasmid pCJFEX, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

16. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_MK541988 (Campylobacter coli strain CVM N61740F plasmid pN61740F, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

17. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_MK541989 (Campylobacter coli strain CVM N61925F plasmid pN61925F, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

18. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NC_022354 (Campylobacter jejuni subsp. jejuni 00-2544 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

19. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_KX686749 (Campylobacter coli strain Tx40 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

20. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP007182 (Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

21. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NC_006134 (Campylobacter coli plasmid pCC31, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

22. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP007180 (Campylobacter coli RM5611 plasmid pRM5611_48kb, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

23. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP010073 (Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

24. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP023544 (Campylobacter jejuni strain CFSAN032806 plasmid pCFSAN032806, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

25. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to CP002030 (Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

26. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017418 (Campylobacter jejuni strain MTVDSCj13 plasmid pMTVDSCj13-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

27. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017419 (Campylobacter jejuni strain MTVDSCj16 plasmid pMTVDSCj16-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

28. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017866 (Campylobacter coli strain YF2105 plasmid pCCDM105L, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

29. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017879 (Campylobacter coli strain BG2108 plasmid pCCDM108L, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

30. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017416 (Campylobacter jejuni strain MTVDSCj07 plasmid pMTVDSCj07-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

31. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017872 (Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

32. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP020775 (Campylobacter jejuni strain YH002 plasmid pCJP002, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

33. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NC_022355 (Campylobacter coli CVM N29710 plasmid pN29710-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	Protospacer
**************************************************

34. spacer 1.1|40967|50|NZ_CP017866|CRISPRCasFinder matches to NZ_CP017869 (Campylobacter coli strain MG1116 plasmid pCCDM116L, complete sequence) position: , mismatch: 1, identity: 0.98

ttgtttttttaaagtccctattttccatatgttattttcgtaaaaatgtc	CRISPR spacer
ttgtttttttaaagtccctattttccatatgttcttttcgtaaaaatgtc	Protospacer
********************************* ****************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017865_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017865_1

1589113-1589206

Orphan

Consensus_repeat	Method
TGAAAAAGAAAAGGTTTTGATTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017865_1

>merge|NZ_CP017865|1|1589113-1589206|CRISPRCasFinder
TGAAAAAGAAAAGGTTTTGATTGAATAATCAATGAAAATTTTATTTTACACATGTTTATAGTATGTATATATAAAAAGAAAAGGTTTTGATTGA

>NZ_CP017865|1|1|1589113-1589206|CRISPRCasFinder
TGAAAAAGAAAAGGTTTTGATTGA	ATAATCAATGAAAATTTTATTTTACACATGTTTATAGTATGTATAT
ATAAAAAGAAAAGGTTTTGATTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017865.1\|WP_002790458.1\|1591717_1591960_-\|ArsR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|253356
NZ_CP017865.1\|WP_002778025.1\|1586392_1586902_+\|DUF2393-domain-containing-protein	unknown	unknown	gnl\|CDD\|370586
NZ_CP017865.1\|WP_002778021.1\|1590196_1590571_+\|TM2-domain-containing-protein	unknown	unknown	gnl\|CDD\|377473
NZ_CP017865.1\|WP_002778018.1\|1591950_1592307_-\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|260133
NZ_CP017865.1\|WP_002782463.1\|1585862_1586393_+\|DUF2393-domain-containing-protein	unknown	unknown	gnl\|CDD\|370586
NZ_CP017865.1\|WP_002778034.1\|1583306_1583513_-\|4-oxalocrotonate-tautomerase-family-protein	unknown	unknown	gnl\|CDD\|224853
NZ_CP017865.1\|WP_002782466.1\|1583839_1584754_+\|branched-chain-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|235841
NZ_CP017865.1\|WP_002778035.1\|1582851_1583310_-\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|224146
NZ_CP017865.1\|WP_002778008.1\|1594745_1595882_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017865.1\|WP_002778039.1\|1579187_1580411_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
NZ_CP017865.1\|WP_002814321.1\|1590611_1591616_-\|dihydroorotase	unknown	unknown	gnl\|CDD\|235474
NZ_CP017865.1\|WP_002778010.1\|1593969_1594728_+\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197319
NZ_CP017865.1\|WP_002778036.1\|1581760_1582852_-\|epoxyqueuosine-reductase-QueH	unknown	unknown	gnl\|CDD\|224551
NZ_CP017865.1\|WP_002778007.1\|1595896_1596160_-\|DUF493-domain-containing-protein	unknown	unknown	gnl\|CDD\|377327
NZ_CP017865.1\|WP_002794714.1\|1592306_1593854_-\|lipid-A/FlgG-phosphoethanolamine-transferase-EptC	unknown	unknown	gnl\|CDD\|225105
NZ_CP017865.1\|WP_057991253.1\|1596137_1596611_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP017865.1\|WP_002782472.1\|1581205_1581646_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP017865.1\|WP_002778038.1\|1580403_1581195_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	unknown	unknown	gnl\|CDD\|235390
NZ_CP017865.1\|WP_002778030.1\|1584769_1585852_+\|membrane-protein	unknown	unknown	gnl\|CDD\|259799
NZ_CP017865.1\|WP_002786810.1\|1589321_1590032_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312

Protein	Function_ID	Function_description	E-value
NZ_CP017865.1\|WP_002790458.1\|1591717_1591960_-\|ArsR-family-transcriptional-regulator	gnl\|CDD\|253356	pfam05732, RepL, Firmicute plasmid replication protein (RepL). This family consists of Firmicute RepL proteins which are involved in plasmid replication.	0.00326079
NZ_CP017865.1\|WP_002778025.1\|1586392_1586902_+\|DUF2393-domain-containing-protein	gnl\|CDD\|370586	pfam09624, DUF2393, Protein of unknown function (DUF2393). The function of this protein is unknown. It is always found as part of a two-gene operon with IPR013416, a protein that appears to span the membrane seven times. It has so far been found in the bacteria Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Rhizobium meliloti, and Gloeobacter violaceus.	3.00374e-24
NZ_CP017865.1\|WP_002778021.1\|1590196_1590571_+\|TM2-domain-containing-protein	gnl\|CDD\|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	3.70074e-07
NZ_CP017865.1\|WP_002778018.1\|1591950_1592307_-\|diacylglycerol-kinase	gnl\|CDD\|260133	cd14264, DAGK_IM, Integral membrane diacylglycerol kinase. This mostly bacterial family of homo-trimeric integral membrane enzymes, the products of the dgkA gene, catalyzes the ATP-dependent phosphorylation of diacylglycerol to phosphatidic acid. Escherichia coli DAGK participates in the membrane-derived oligosaccharide cycle (MDO cycle) by recycling lipids to restore phosphatidylglycerols that were used up in the biosynthesis of MDOs. DAGK also recycles diacylglycerols that are produced during the biosynthesis of lipopolysaccharides (LPS) back to phospholipids. DAGK is not the main source of phosphatidic acid in de-novo biosynthesis of glycerophospholipids. Escherichia coli DAGK has low activity as an undecaprenol kinase.	8.92836e-39
NZ_CP017865.1\|WP_002782463.1\|1585862_1586393_+\|DUF2393-domain-containing-protein	gnl\|CDD\|370586	pfam09624, DUF2393, Protein of unknown function (DUF2393). The function of this protein is unknown. It is always found as part of a two-gene operon with IPR013416, a protein that appears to span the membrane seven times. It has so far been found in the bacteria Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Rhizobium meliloti, and Gloeobacter violaceus.	5.27153e-30
NZ_CP017865.1\|WP_002778034.1\|1583306_1583513_-\|4-oxalocrotonate-tautomerase-family-protein	gnl\|CDD\|224853	COG1942, COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog [General function prediction only].	8.45196e-19
NZ_CP017865.1\|WP_002782466.1\|1583839_1584754_+\|branched-chain-amino-acid-transaminase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
NZ_CP017865.1\|WP_002778035.1\|1582851_1583310_-\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	1.31346e-80
NZ_CP017865.1\|WP_002778039.1\|1579187_1580411_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
NZ_CP017865.1\|WP_002814321.1\|1590611_1591616_-\|dihydroorotase	gnl\|CDD\|235474	PRK05451, PRK05451, dihydroorotase; Provisional.	1.02061e-169
NZ_CP017865.1\|WP_002778010.1\|1593969_1594728_+\|exodeoxyribonuclease-III	gnl\|CDD\|197319	cd09085, Mth212-like_AP-endo, Methanothermobacter thermautotrophicus Mth212-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes the thermophilic archaeon Methanothermobacter thermautotrophicus Mth212and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Mth212 is an AP endonuclease, and a DNA uridine endonuclease (U-endo) that nicks double-stranded DNA at the 5'-side of a 2'-d-uridine residue. After incision at the 5'-side of a 2'-d-uridine residue by Mth212, DNA polymerase B takes over the 3'-OH terminus and carries out repair synthesis, generating a 5'-flap structure that is resolved by a 5'-flap endonuclease. Finally, DNA ligase seals the resulting nick. This U-endo activity shares the same catalytic center as its AP-endo activity, and is absent from other AP endonuclease homologues.	1.24063e-119
NZ_CP017865.1\|WP_002778036.1\|1581760_1582852_-\|epoxyqueuosine-reductase-QueH	gnl\|CDD\|224551	COG1636, COG1636, Uncharacterized protein conserved in bacteria [Function unknown].	4.06965e-88
NZ_CP017865.1\|WP_002778007.1\|1595896_1596160_-\|DUF493-domain-containing-protein	gnl\|CDD\|377327	pfam04359, DUF493, Protein of unknown function (DUF493). This domain is likely to act in a regulatory capacity like pfam01842 domains. This domain has a remarkable property in that the C-terminal residue of every protein in the family lies up in the alignment. This suggests that the C-terminal residue plays some important functional role (Bateman A pers obs).	8.67121e-10
NZ_CP017865.1\|WP_002794714.1\|1592306_1593854_-\|lipid-A/FlgG-phosphoethanolamine-transferase-EptC	gnl\|CDD\|225105	COG2194, COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only].	1.82927e-150
NZ_CP017865.1\|WP_057991253.1\|1596137_1596611_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	3.74176e-90
NZ_CP017865.1\|WP_002782472.1\|1581205_1581646_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	8.54763e-82
NZ_CP017865.1\|WP_002778038.1\|1580403_1581195_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	gnl\|CDD\|235390	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase.	1.8258e-130
NZ_CP017865.1\|WP_002778030.1\|1584769_1585852_+\|membrane-protein	gnl\|CDD\|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	1.55682e-60
NZ_CP017865.1\|WP_002786810.1\|1589321_1590032_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.40583e-13

>NZ_CP017865.1|WP_002778025.1|1586392_1586902_+|DUF2393-domain-containing-protein
MQFTIFHILAFVILLLCFILVCILIFLKVKQKEFALISYTIATIFTALLIYSVFLTINQFTTQASLSKLTFSRDLRHESIIITGRVQNLTKFNIRKCYLMLSILNKKRVGGEIFNDKNIRNAKMQNTSVSYTIEIIDTLPGNTYKEFRASVPFPPTFNNPEFYHTLKCI
>NZ_CP017865.1|WP_002782463.1|1585862_1586393_+|DUF2393-domain-containing-protein
MERLKEIVHFYTTHLYLVDYMLILFVFFLFTCVLLLCIFLRHKPVAALLIIALNIIICFLIYTYGYKFIDSEVRSRKTTIVEQKFIQSSEALIIDFNITNTSKNDFKQCKVIARIFKDKLPEDNLINEYKNQLIPFRQKSREIFNLKKNTTQFQRISFDNFNYDNNYTIRLNSECF
>NZ_CP017865.1|WP_002778030.1|1584769_1585852_+|membrane-protein
MPADLNDYFNKKNGNSNNNNNRQNFNFKAPEFNFKGFGKFSPFVYGVIIIVLFLIIAKPFMVINSGEMGIKSTTGRYDPNPLEPGLHFFIPFIQKITTIDTRVRQINYASIEGSNENLTSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQTIATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNAIATQIEEGIRKTIEAQPNEPVELRAVQLREIILPLKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEANATIISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAKIFLTPGGAVPNIWVDTKDAKKQSSTNMN
>NZ_CP017865.1|WP_002782466.1|1583839_1584754_+|branched-chain-amino-acid-transaminase
MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTDKGLAIFRLEDHTKRLLESAKITLLNCPFSQKELEKAQIELLKVNDFKNNVYIRPVIFLGDGVMGLYHVKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFVRNSVKSCMGKAKASANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSITQDTVLKIAHDLGLTVLRQRISRDEVYTADEAFFTGTAAEITPINNVDARIIGSGIRGSITKKLQDAYFDVVYGRNEKYASMLTYI
>NZ_CP017865.1|WP_002778034.1|1583306_1583513_-|4-oxalocrotonate-tautomerase-family-protein
MPIVNIKLAKPALSKEQKAELIADITELLSTKYNKSKERVVVMLEDIESYDIGFGGESVEAIKAKANK
>NZ_CP017865.1|WP_002778035.1|1582851_1583310_-|thioredoxin-dependent-thiol-peroxidase
MSVLKVGDEAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTPGCTTEACDFSANYDKFCDKNAVIIGVSPDGVTSHDKFIAKFNLKHILLSDSEKEVAKAYGAWGLKKNYGKEYEGIIRSTFVIDEAGKIAQIYSNVRVKDHALKVLESL
>NZ_CP017865.1|WP_002778036.1|1581760_1582852_-|epoxyqueuosine-reductase-QueH
MLVHICCSVDSHYFIEELRKEYPKEKIIGYFYDPNIHPLSEYELRFLDVKRSCDKLGIKLYKGEYEYEKWLKAVKGYEDEPEKGARCEICFDLRMGSSVEFAAKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKKEMLYHQNYCGCIYGLKKQKQDKNFIDELMSPINAQILPASIEARIALYKKVNLLEKKGIKFEIIRQKFLNYRLLSALIKLDKKAVKSHILFYSHFKNHYTRFSLDEKNLNENLKNGIYKSTKDEISFIEFWRFNSDFKNKWKSFEDFLKHPLKIEEEIKWRNKHFGAYDLSPVIVLEKILPTRYEIVAKSEIYYDVKEVIKRT
>NZ_CP017865.1|WP_002782472.1|1581205_1581646_-|3-hydroxyacyl-ACP-dehydratase-FabZ
MIDVMKIQEILPHRYPFLLVDKITELKVGEVVRGYKNISISDHVFMGHFPGHPIYPGVLILEGMAQTGGVLAFESMDAKVDPKSKVVYFTGIDGAKFRNPVRPGDRLDYEMQVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK
>NZ_CP017865.1|WP_002778038.1|1580403_1581195_-|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase
MKKIHPSAVIEDGAILGDDVVIEAYAYVSKEAKIGNGVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKDEQKSGVIIGQNSTIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGDNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSKAFKFLFRQGDLKENAQKLLENNESENVNKMCKFILETKRGIPVYRGKNNA
>NZ_CP017865.1|WP_002778039.1|1579187_1580411_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEEKEFKEPKHEHGVDFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKSELQDDDVELFKSNILLIGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTRLLQAADGDVERAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVNIPPKGGRKHPNQDFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDNEKENSKALLEKIEPDDLVHFGLIPELIGRLHVITSLNELNEDDMVRILTEPKNAIVKQYQKLFAIDGVNLKFEDDALREIAKLALERKTGARGLRSIIEEIMVDLMFELPEYKNYDIVITKEVVRDGAKALLIKKKIS
>NZ_CP017865.1|WP_002786810.1|1589321_1590032_+|class-I-SAM-dependent-methyltransferase
MNLWDKKAKSYARYNQKLNSIQEQSFKELEKLNISFKDKKIIDIGCGTGVWTLYLAQNAKETTALDNAKAMLEILKEDANKLQLTNIKYENCTFTEWINKNQNAQFDIAFLSMSPALQDKKDYLNFMRLAKIRIYLGWADYRKSDFLDPIFKHFNTEFKGIYKQDLESYLLENNVKFHKFIFDETRIVERKKDEAIENTLWHLNMNGVKASKQDLETFVKGDIKETIQSKIKLLVF
>NZ_CP017865.1|WP_002778021.1|1590196_1590571_+|TM2-domain-containing-protein
MDINTVLMMISDKIPSNSLPLVQDKLKNASEDKINSLAILPFKSHIIGLILGLFLGAFGIDRFYKGDIGLGIAKLITWLAGVVTIWIYIGGLILFVLWIWCIVDWFLVWKGIKKDNLNKILAVL
>NZ_CP017865.1|WP_002814321.1|1590611_1591616_-|dihydroorotase
MTLKNPLDMHLHLRDKNMLSLVAPFSAKDFRAGVIMPNLVPPLCDLESLKSYKTRIINACENENFTPLMTLFFKNYDEKFLESAKDEIFGIKLYPAGITTNSKGGVSSFDIENLKPTLEAMSDLQIPLLVHGETNDFVMDRESNFAKIYENLAKNFPRLKIVMEHITTQTLCELLKDYENLYATITLHHLIITLDDVIGGKMQPHLFCKPIAKHYKDKEALCELAFGGYEKVMFGSDSAPHPKHEKECCGCAAGVFSASVALCVLADLFSKNSNEVNLQKFISDNACKVHNLTFEKEKIIVLENQEWQVPNEYKNENEKVVPFMAGESLKFRVK
>NZ_CP017865.1|WP_002790458.1|1591717_1591960_-|ArsR-family-transcriptional-regulator
MAVKIENLMREILGKKRFELLQFLCENADENGFVMIKISELEARLNQSKPTIIATFKFLEEKKLFKKLKNGFYQLYIPCD
>NZ_CP017865.1|WP_002778018.1|1591950_1592307_-|diacylglycerol-kinase
MKPKYHLLNNARYALEGILALLKNEMAFRLELCVIIPAIVFSFFLDVSFLEHLFLITVLILILITEALNSAIEACVDLITNEWHEKAKVAKDCASAAVFFSVCLALFIWGFILGKLWL
>NZ_CP017865.1|WP_002794714.1|1592306_1593854_-|lipid-A/FlgG-phosphoethanolamine-transferase-EptC
MFKFKLSWFGFVLFNSILITLLNFNLHSFVYEKLSQNLLLTLVFIVAYFGLVHMIFSLIFVKYLTKILSIFFILSSCTSLYFITFYGVLIDSDMIQNVMQTDIKEVKDLLSWRLVLLAIVVLLFCVFILRIRIENNTEQGFFKKIRVRVLSALLGCSIFLIAFVPLSKTFIPFFRTYNEIRMYNVPFYPIYAVYRYCVRFVKVKPEFKTIANDAYRENNHTKKLLVLVVGETARAANYSLGGYAKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPCMFSLSKRQNYSSSEYQENVMDILQKTGVKASWIDNNSGECKGVCDRLSDKQQLSSDWDENLLPFLKERLDSLDTQNIIVLHLQGSHGPAYYKRYPSEFKKFIPTCDTNELSKCDSEALINTYDNTLLYTDYLLSEIIKLLKEKKDYESSLIYLSDHGESLGENGIYLHGMPYAIAPSYQTHIPVIFWSNDKKLMMTAQNHKGLKLSQDNLFSTLLGYFDVKTMVYESDYDLLNQTLKAN
>NZ_CP017865.1|WP_002778010.1|1593969_1594728_+|exodeoxyribonuclease-III
MKLLSWNVNGLRAICDKNALDWIIKENIDFIGFQEIKAHEDKFPKKIYEYPFKHMYSNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPNGQKDEERLSFKMKFYAKFLVYLEKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAWIDDLLKLGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDYFFISTGLKDKLKNAFIRDDIFGSDHAPVGIEIDI
>NZ_CP017865.1|WP_002778008.1|1594745_1595882_-|hypothetical-protein
MKNTLIIFENSLSNLKKDEVKDLLEDLSFNLAYKQISQDPHSTKKILNSLLVEFLTILKKLDLFDDENVAKVIKALVKASVGDAQNVLYEYISEAELLNKQIENQKNLIKNQISDNFLEFENILQECSFCDEFSSGLNDAILFDIEMLGILKETAESAFLTTLEKAEDIELTSSEIAKSLVYNAICEAHFEKERILKISSIILNTAFEIANESIAYAKDLCLGAIKGTRDGISLAMEKFKTTLAYAKFEEDVSLKSKELIGIEDDFIALLKREIKEQKNPSKDIVENLLEHELDNLFAKFKRLAVESREQLLLVLNDIKKNPKINDFNRLTQRKLHRFKQEILELEKVAGEKYKELNSKKAKKLGVRLWERAKKLIKK
>NZ_CP017865.1|WP_002778007.1|1595896_1596160_-|DUF493-domain-containing-protein
MVNLCDLKQEPIVNYPTFWDYKVIFEAHVHAGALFEELLGQRDFKYKHSNASSSGKYQSFLLSVYVDSKKDRLDIFEKLKAKAKFVL
>NZ_CP017865.1|WP_057991253.1|1596137_1596611_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MELTHLDENNRPKMVDVSQKDISKRVATASGMISMSEEAFKAIKNNTAKKGPVLQTAIIAAIMGAKKTSEIIPMCHPLMISKVETDIVEFPKDYTFKLIVTVKCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKTMKISEIVLESKEGGKSGKFVRS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP017865_1	1.1\|1589137\|46\|NZ_CP017865\|CRISPRCasFinder	1589137-1589182	46	NZ_CP017865.1	313108-313153	0	1.0

1. spacer 1.1|1589137|46|NZ_CP017865|CRISPRCasFinder matches to position: 313108-313153, mismatch: 0, identity: 1.0

ataatcaatgaaaattttattttacacatgtttatagtatgtatat	CRISPR spacer
ataatcaatgaaaattttattttacacatgtttatagtatgtatat	Protospacer
**********************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

428254 : 436930

Escherichia_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002779233.1\|428254_428917_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	5.0e-06	21.3
WP_002795151.1\|428916_430032_+	capsule polysaccharide transporter	NA	NA	NA	NA
WP_052785723.1\|430033_431665_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_072235018.1\|431691_432639_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	3.4e-40	33.1
WP_052785725.1\|432663_433551_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.7e-103	62.5
WP_052785726.1\|433557_434133_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A218MN57	uncultured_virus	1.8e-28	42.0
WP_052785727.1\|434125_435007_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	7.0e-32	35.5
WP_052785728.1\|435003_436011_+	dTDP-glucose 4,6-dehydratase	K7QJG5	Escherichia_phage	6.5e-82	47.9
WP_052785729.1\|436003_436930_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.7e-15	36.2

DBSCAN-SWA_2

1391705 : 1466380

Campylobacter_phage(39.39%)

tRNA,terminase,tail,head,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002795454.1\|1391705_1392683_-\|tail	tail protein	A0A219Y9Y2	Aeromonas_phage	1.4e-12	25.3
WP_002784520.1\|1392676_1392868_-\|tail	tail protein	NA	NA	NA	NA
WP_002784519.1\|1392860_1393235_-\|tail	tail protein	NA	NA	NA	NA
WP_002803354.1\|1393360_1394596_-	hypothetical protein	Q6QIB9	Burkholderia_phage	1.2e-29	34.7
WP_002803356.1\|1394598_1395969_-	DUF935 family protein	A0A2H4JHL1	uncultured_Caudovirales_phage	3.8e-16	25.5
WP_002803358.1\|1395978_1397649_-\|terminase	phage terminase large subunit	H1ZZE1	Pseudomonas_virus	5.7e-91	40.8
WP_002784511.1\|1397648_1398131_-	DUF1804 family protein	NA	NA	NA	NA
WP_002784509.1\|1398123_1398582_-	DUF1320 domain-containing protein	NA	NA	NA	NA
WP_002784507.1\|1398697_1399675_-	hypothetical protein	R9TRN2	Rhizobium_phage	3.3e-06	23.4
WP_002791394.1\|1399677_1400205_-	hypothetical protein	NA	NA	NA	NA
WP_002794192.1\|1400207_1401023_-	hypothetical protein	A0A2H4JAW3	uncultured_Caudovirales_phage	6.5e-24	47.6
WP_002784501.1\|1401024_1401459_-	hypothetical protein	NA	NA	NA	NA
WP_057980528.1\|1401606_1401996_+	DUF882 domain-containing protein	A0A2I7R2R3	Vibrio_phage	1.7e-22	44.5
WP_071306714.1\|1402005_1402266_+	hypothetical protein	NA	NA	NA	NA
WP_002790263.1\|1402262_1402511_+	hypothetical protein	NA	NA	NA	NA
WP_002865465.1\|1403046_1404573_+\|terminase	phage terminase large subunit	A0A0M3LQB7	Mannheimia_phage	6.4e-49	31.1
WP_071306715.1\|1404569_1405952_+	DUF935 family protein	A0A0M3LRU4	Mannheimia_phage	6.3e-11	23.2
WP_002870187.1\|1406068_1407202_+	hypothetical protein	A0A1C6ZDL9	Pseudomonas_phage	5.1e-27	34.2
WP_002918728.1\|1407340_1407820_-	hypothetical protein	A7YGZ0	Campylobacter_phage	2.8e-06	30.2
WP_002918730.1\|1407806_1407998_-	hypothetical protein	NA	NA	NA	NA
WP_002909839.1\|1408049_1408478_-	hypothetical protein	NA	NA	NA	NA
WP_002864977.1\|1408474_1408654_-	hypothetical protein	NA	NA	NA	NA
WP_002790266.1\|1408885_1409251_-	hypothetical protein	NA	NA	NA	NA
WP_002790896.1\|1409247_1409601_-	hypothetical protein	NA	NA	NA	NA
WP_019108985.1\|1409597_1409867_-	hypothetical protein	NA	NA	NA	NA
WP_002790002.1\|1409866_1410754_-\|head	head protein	A0A2K9VH18	Faecalibacterium_phage	3.5e-63	43.7
WP_002790001.1\|1410753_1411794_-	hypothetical protein	NA	NA	NA	NA
WP_002865847.1\|1411924_1412389_+	DUF1804 family protein	NA	NA	NA	NA
WP_071306716.1\|1412385_1412883_+\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	8.6e-11	35.2
WP_002791385.1\|1412882_1413095_+	hypothetical protein	NA	NA	NA	NA
WP_057981095.1\|1413091_1413382_+\|plate	baseplate assembly protein	Q8H9N4	Vibrio_phage	1.8e-08	37.8
WP_057981097.1\|1414502_1415123_+\|tail	phage tail protein I	A7YGG0	Campylobacter_phage	6.0e-54	90.6
WP_002803380.1\|1415122_1416157_+\|tail	phage tail protein	A7YGA7	Campylobacter_phage	2.6e-78	88.8
WP_002784668.1\|1416166_1416802_+	hypothetical protein	NA	NA	NA	NA
WP_002784666.1\|1416801_1418559_+	radical SAM protein	NA	NA	NA	NA
WP_002789987.1\|1418551_1418938_+	DUF1353 domain-containing protein	A7YGM3	Campylobacter_phage	9.2e-61	88.4
WP_002794205.1\|1421017_1421527_+\|tail	tail protein	A7YGZ4	Campylobacter_phage	5.6e-90	99.4
WP_002791367.1\|1421630_1421870_+\|tail	phage tail assembly protein	A7YG75	Campylobacter_phage	1.5e-08	89.9
WP_002791365.1\|1421981_1422287_-	hypothetical protein	A7YG88	Campylobacter_phage	1.9e-32	90.1
WP_002806799.1\|1422328_1424662_+\|tail	phage tail tape measure protein	A7YGE8	Campylobacter_phage	0.0e+00	89.7
WP_002791360.1\|1424665_1425154_+	virion morphogenesis protein	A7YGZ0	Campylobacter_phage	8.6e-80	90.7
WP_002784651.1\|1426021_1426309_-	hypothetical protein	A7YGG4	Campylobacter_phage	1.6e-46	97.9
WP_002784648.1\|1426388_1426583_-	hypothetical protein	A7YG72	Campylobacter_phage	1.1e-27	96.9
WP_002784647.1\|1426592_1426913_-	hypothetical protein	A7YG71	Campylobacter_phage	1.6e-50	97.2
WP_071306717.1\|1426993_1427617_-	S24 family peptidase	A7YG70	Campylobacter_phage	4.8e-59	98.2
WP_002803230.1\|1428229_1429867_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-13	33.1
WP_002778424.1\|1429933_1430701_-	hypothetical protein	NA	NA	NA	NA
WP_002778423.1\|1430669_1431893_-	hypothetical protein	NA	NA	NA	NA
WP_002778421.1\|1432173_1432758_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	1.2e-19	37.4
WP_002778419.1\|1432789_1433167_-	hypothetical protein	NA	NA	NA	NA
WP_004284883.1\|1433217_1433553_-	hypothetical protein	NA	NA	NA	NA
WP_002799636.1\|1433542_1435120_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.2e-51	27.1
WP_002783102.1\|1435197_1435455_-	hypothetical protein	NA	NA	NA	NA
WP_002778410.1\|1435459_1435666_-	hypothetical protein	NA	NA	NA	NA
WP_002783105.1\|1435715_1436069_-	hypothetical protein	NA	NA	NA	NA
WP_002844715.1\|1436320_1436650_-	hypothetical protein	NA	NA	NA	NA
WP_002778401.1\|1436816_1437026_+	transcriptional regulator	NA	NA	NA	NA
WP_002778400.1\|1437086_1438043_+	membrane protein	NA	NA	NA	NA
WP_002789646.1\|1438047_1438620_-	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_002778398.1\|1438694_1439057_-	HIT family protein	NA	NA	NA	NA
WP_071306718.1\|1439166_1439847_+	hypothetical protein	NA	NA	NA	NA
WP_002778396.1\|1439865_1440570_-	sel1 repeat family protein	NA	NA	NA	NA
WP_002797318.1\|1440566_1442399_-	ATP-binding protein	NA	NA	NA	NA
WP_002778389.1\|1442388_1444575_-	ATP-binding protein	NA	NA	NA	NA
WP_002778387.1\|1444602_1445328_-	fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
WP_002783123.1\|1445320_1447312_-	fumarate reductase flavoprotein subunit	M1HTN0	Paramecium_bursaria_Chlorella_virus	8.5e-17	26.2
WP_002778384.1\|1447295_1448081_-	fumarate reductase cytochrome b subunit	NA	NA	NA	NA
WP_002844708.1\|1448148_1448964_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_002778381.1\|1449054_1449960_+	hypothetical protein	NA	NA	NA	NA
WP_052785786.1\|1450032_1450824_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_002778371.1\|1450820_1451648_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_002778362.1\|1451660_1452206_-	DUF1882 domain-containing protein	NA	NA	NA	NA
WP_002844706.1\|1452202_1453447_-	serine hydroxymethyltransferase	A0A219YB23	Aeromonas_phage	4.5e-101	51.4
WP_002844704.1\|1453443_1454952_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	3.3e-90	40.2
WP_002778353.1\|1454951_1455422_-	transcriptional repressor	NA	NA	NA	NA
WP_002778351.1\|1455425_1455986_-	CvpA family protein	NA	NA	NA	NA
WP_002778349.1\|1456066_1456354_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_002778347.1\|1456485_1457064_+	hypothetical protein	NA	NA	NA	NA
WP_002778342.1\|1457060_1458059_+	hypothetical protein	NA	NA	NA	NA
WP_002778340.1\|1458055_1458343_+	hypothetical protein	NA	NA	NA	NA
WP_002778333.1\|1458329_1458959_+	type III pantothenate kinase	NA	NA	NA	NA
WP_002778331.1\|1459085_1460432_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_002780713.1\|1460483_1461926_+	pyruvate kinase	NA	NA	NA	NA
WP_057991257.1\|1462017_1462644_+	hypothetical protein	NA	NA	NA	NA
WP_002778326.1\|1462672_1465135_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_002785304.1\|1465144_1466380_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.3e-87	51.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017866

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP017865

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection