CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017874	Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP017873	Campylobacter coli strain WA333 chromosome, complete genome	1 crisprs	csa3,cas14j,DEDDh,WYL	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017873_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017873_1

359508-359631

Orphan

Consensus_repeat	Method
CTTAATGACTTTGGTTATATAGATACGGGTACTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017873_1

>merge|NZ_CP017873|1|359508-359631|CRISPRCasFinder
CTTAATGACTTTGGTTATATAGATACGGGTACTCTTTTAGATAATAAAAGTTTAGTTTTAAGAAATAAAGCCCTTTACCAACGCTTTAACCTTAATGACTTTGGCTATATAGATACGGGTACTC

>NZ_CP017873|1|1|359508-359631|CRISPRCasFinder
CTTAATGACTTTGGTTATATAGATACGGGTACTC	TTTTAGATAATAAAAGTTTAGTTTTAAGAAATAAAGCCCTTTACCAACGCTTTAAC
CTTAATGACTTTGGCTATATAGATACGGGTACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017873.1\|WP_002783936.1\|356744_357260_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|130771
NZ_CP017873.1\|WP_002803640.1\|349260_350256_-\|phospholipase	unknown	unknown	gnl\|CDD\|225385
NZ_CP017873.1\|WP_032588431.1\|368297_368561_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|172158
NZ_CP017873.1\|WP_002777752.1\|355733_356741_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_CP017873.1\|WP_002795405.1\|350890_352198_+\|fibronectin-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224212
NZ_CP017873.1\|WP_071305081.1\|354342_355737_+\|deacylase	unknown	unknown	gnl\|CDD\|374954
NZ_CP017873.1\|WP_052774947.1\|373942_375097_-\|GDP-N,N'-diacetylbacillosamine-2-epimerase-(hydrolyzing)	unknown	unknown	gnl\|CDD\|274654
NZ_CP017873.1\|WP_002788729.1\|371306_372014_-\|CMP-N,N'-diacetyllegionaminic-acid-synthase	unknown	unknown	gnl\|CDD\|224008
NZ_CP017873.1\|WP_002777761.1\|352200_352539_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017873.1\|WP_079742536.1\|363512_365399_-\|motility-associated-factor-glycosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225324
NZ_CP017873.1\|WP_002792714.1\|376827_377949_-\|N-acetyl-sugar-amidotransferase	unknown	unknown	gnl\|CDD\|274658
NZ_CP017873.1\|WP_002799191.1\|348159_349128_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226965
NZ_CP017873.1\|WP_002794569.1\|370536_371307_-\|flagellin-modification-protein-PtmA	unknown	unknown	gnl\|CDD\|236399
NZ_CP017873.1\|WP_002780542.1\|352547_353273_+\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|366491
NZ_CP017873.1\|WP_052779111.1\|375089_376094_-\|N,N'-diacetyllegionaminate-synthase	unknown	unknown	gnl\|CDD\|274655
NZ_CP017873.1\|WP_002780540.1\|350252_350828_-\|molybdenum-cofactor-guanylyltransferase	unknown	unknown	gnl\|CDD\|133000
NZ_CP017873.1\|WP_002799194.1\|353269_354346_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|223814
NZ_CP017873.1\|WP_002798112.1\|372006_372912_-\|L-glutamine-D-fructose-6-phosphate-isomerase-subunit	unknown	unknown	gnl\|CDD\|223745
NZ_CP017873.1\|WP_002788731.1\|372908_373934_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|133048
NZ_CP017873.1\|WP_071305083.1\|360424_361813_+\|motility-associated-factor-glycosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225324

Protein	Function_ID	Function_description	E-value
NZ_CP017873.1\|WP_002783936.1\|356744_357260_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|130771	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	7.54189e-13
NZ_CP017873.1\|WP_002803640.1\|349260_350256_-\|phospholipase	gnl\|CDD\|225385	COG2829, PldA, Outer membrane phospholipase A [Cell envelope biogenesis, outer membrane].	1.4245e-108
NZ_CP017873.1\|WP_032588431.1\|368297_368561_+\|hypothetical-protein	gnl\|CDD\|172158	PRK13589, PRK13589, flagellin A.	1.25687e-43
NZ_CP017873.1\|WP_002777752.1\|355733_356741_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	1.51964e-150
NZ_CP017873.1\|WP_002795405.1\|350890_352198_+\|fibronectin-binding-domain-containing-protein	gnl\|CDD\|224212	COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription].	3.26034e-40
NZ_CP017873.1\|WP_071305081.1\|354342_355737_+\|deacylase	gnl\|CDD\|374954	pfam17033, Peptidase_M99, Carboxypeptidase controlling helical cell shape catalytic. This is the peptidase domain of a D,L-carboxypeptidase. The active site residues are Arg86, Glu222 and the metal ligands, in the peptidase domain, are Gln46, Glu49 and His128 in UniProtKB:O25708. The protein binds many zinc ions and a calcium ion and there are other metal binding sites. The catalytic activity is the release of m-Dpm from the peptide muramyl-Ala-gamma-D-Glu-m-Dpm; this is probably the precursor of the cell wall cross-linking peptide.	9.52529e-86
NZ_CP017873.1\|WP_052774947.1\|373942_375097_-\|GDP-N,N'-diacetylbacillosamine-2-epimerase-(hydrolyzing)	gnl\|CDD\|274654	TIGR03568, Polysialic_acid_biosynthesis_protein_P7, UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.	0
NZ_CP017873.1\|WP_002788729.1\|371306_372014_-\|CMP-N,N'-diacetyllegionaminic-acid-synthase	gnl\|CDD\|224008	COG1083, NeuA, CMP-N-acetylneuraminic acid synthetase [Cell envelope biogenesis, outer membrane].	6.44394e-97
NZ_CP017873.1\|WP_079742536.1\|363512_365399_-\|motility-associated-factor-glycosyltransferase-family-protein	gnl\|CDD\|225324	COG2604, COG2604, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP017873.1\|WP_002792714.1\|376827_377949_-\|N-acetyl-sugar-amidotransferase	gnl\|CDD\|274658	TIGR03573, WbuX, N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an invariable contextual association with homologs of the HisH and HisF proteins known as WbuY and WbuZ, respectively. These two proteins are believed to supply the enzyme with ammonium by hydrolysis of glutamine and delivery through an ammonium conduit.	3.58024e-146
NZ_CP017873.1\|WP_002799191.1\|348159_349128_-\|ABC-transporter-permease	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	6.60695e-137
NZ_CP017873.1\|WP_002794569.1\|370536_371307_-\|flagellin-modification-protein-PtmA	gnl\|CDD\|236399	PRK09186, PRK09186, flagellin modification protein A; Provisional.	1.39433e-145
NZ_CP017873.1\|WP_002780542.1\|352547_353273_+\|phosphatidate-cytidylyltransferase	gnl\|CDD\|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	6.21758e-38
NZ_CP017873.1\|WP_052779111.1\|375089_376094_-\|N,N'-diacetyllegionaminate-synthase	gnl\|CDD\|274655	TIGR03569, ORF_8_similar_to_NeuB_family, N-acetylneuraminate synthase. This family is a subset of the pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.	0
NZ_CP017873.1\|WP_002780540.1\|350252_350828_-\|molybdenum-cofactor-guanylyltransferase	gnl\|CDD\|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	1.03666e-50
NZ_CP017873.1\|WP_002799194.1\|353269_354346_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|223814	COG0743, Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism].	2.87072e-161
NZ_CP017873.1\|WP_002798112.1\|372006_372912_-\|L-glutamine-D-fructose-6-phosphate-isomerase-subunit	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.86141e-32
NZ_CP017873.1\|WP_002788731.1\|372908_373934_-\|CBS-domain-containing-protein	gnl\|CDD\|133048	cd06426, NTP_transferase_like_2, NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	1.50395e-120
NZ_CP017873.1\|WP_071305083.1\|360424_361813_+\|motility-associated-factor-glycosyltransferase-family-protein	gnl\|CDD\|225324	COG2604, COG2604, Uncharacterized protein conserved in bacteria [Function unknown].	1.33401e-112

>NZ_CP017873.1|WP_002783936.1|356744_357260_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MKRAFTILELVFVIVILGILAAIALPKFSSSRDEAEVSKSLNNLKTLINDISIYALKNSHLSTMNFMSNVSGVENVDLNNFIGIKEVNFRVGEDKECIKLIFIDRNDFVLMGISSNEASKNAIINIANNPKQEFQNLDFTSNSKNKACVALSKNENFKNLASKTYLLIGGM
>NZ_CP017873.1|WP_002777752.1|355733_356741_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MKNLILAIESSCDDSSIAVIDKDTLECKFHKKISQEMEHNVYGGVVPELAARLHSEALPKILEQCKGYFDKLCAIAVTNEPGLSVSLLSGISMAKTLALSLNLPLMAINHLKGHIYSLFLEEPICLDMGILLVSGGHTKVLYLKEDGKIEILARTNDDSFGESFDKVAKMMNLGYPGGVLIENLAQKAKSKNIHFNIPLKHSKELAYSFSGLKNAVRLEILKHENLDEDIKAEIAYGFENAACEHIMDKLEKIFNLYKFKTFGVVGGASANLNLRSRLQNLCEKYQSKLKLAPLKYCSDNALMIARAGVDTYKRKEFVELEEEILSPKNKNFLRM
>NZ_CP017873.1|WP_071305081.1|354342_355737_+|deacylase
MKFFISIIFFISGLFALDLEFSVGENGKSLDDNNTVLIFGGIQGDEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGKNGDLNRKFASISPKDPDYQTVKRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTNEINASKYPDLESIATQTVNSVNTSLVDPKHAYHLKNTKTQELGDAEMLKALTYFVISNRKAAFANEASKNLPVNLRAYYHLLAIENYLKTAGIEFTRTFELTPQGVDKAINQELEVKLFDDKILLSLKNPRQVINYVPFPVNKELNYNTSNELTAVIAENNSFYIQYGNRFQTRLYPEYLEFSNPFNEVTFQVDSNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESNILVSKKNMQKPYSLDMAGKIYRVEFYELRGANLQQFLENSVESKLIKNAKILDLATLRTARAKDKFIGSILVEFE
>NZ_CP017873.1|WP_002799194.1|353269_354346_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MIVFGSTGSIGLNALKLATLKNIKISALACGENISLLNEQIEQFKPQFVAIKNSKDKHLVKHDKVFVGQEGLEEILSLCEDDLLLNAIVGFAGLKSTLKAKELGKKIALANKESLVVAGKFLKGAKFLPVDSEHSALKFLLESKKDIAKLYVTASGGAFYKHKIKDLSHVSVKDALKHPNWNMGSKITIDSATMANKLFEIIEAYHLYNFKNIDALIEPKSLVHAMCEFKNGASTAYFSRADMKLSISEAIFSKHDSKILEPVDFVKLSGLKFYKISTKKYPIFKLKDELLNNPDLGVIINAANEIGVQNFLDHKIQFLDIAHVVFKALDHFGVPKISSIDEVFEYDYKTREYLRGMK
>NZ_CP017873.1|WP_002780542.1|352547_353273_+|phosphatidate-cytidylyltransferase
MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEAKKLFALENISIIPLAIAFILGSLSHKALLFGILALLLVVGYLVYKKASLKPALIYIYPSLPVLALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVIGGLVCASILGTLIGIFVYSFWLSLLCSFFVAFFAVIGDLLESYFKREAGVKDSGDLIPGHGGILDRIDAVIIATFVMVALL
>NZ_CP017873.1|WP_002777761.1|352200_352539_+|hypothetical-protein
MPVSPIGNMNFVNQNMAYPATQASNELAKEGFAATLNMAEFNEKEKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDDEKNEEDESKDPNFKDAQSIHRLDISI
>NZ_CP017873.1|WP_002795405.1|350890_352198_+|fibronectin-binding-domain-containing-protein
MKYTELMQLQNLFSQFKKIDFIKRVNDNILELSFNRERFIFDLTRGMSAIYTAKLMSKNYNAPFDFMLKKYFNNAFIKEVKLLQDNRILCFSVKVDKAYKSYESKIYFEFTGKNTNVIITDEKDLIIEALRHIDKSYRVVKPNVILESLKPYKMDEKFEEIKNFKDYFTQKFEILHANKIKQIQTLKLAQIDKKIENLKELYLALDKEEVLLDQALNLRKQADILFANLSILKEYEREFELDDFEGKKVKFKLDLSPKESANLLYKNAKKLEQKARNLNLQRENLKEKLEFAYGLKEMLSKAKNEFELEILLPKKSTKKNQENKQDNGIANFYFNEFKICVGKNEKGNENLLKSAKKDDLWLHVRDIPSSHVLIISNKQKISEEVIEFSARLCVNFSGLKKGSYWVDYTLKNFVKVQQKAFVKYTNFKSINITKD
>NZ_CP017873.1|WP_002780540.1|350252_350828_-|molybdenum-cofactor-guanylyltransferase
MKLENLNCVILCGGKSSRMGEDKSKLIFKNQTLTQFQVEKFSKIFKNVYVSAKEDKFGAKFKLIKDCPEFEIYSPMLALYSILSNFKDEFVFILSVDSPNLSDKELLKFLPSLKQDYQIIIAKTPSHKHPLCGFYHSSVAHFCKELLEKNEQKIALLFSKAKTHFVDFEDESPFLNLNFYQEYEQFKSEYE
>NZ_CP017873.1|WP_002803640.1|349260_350256_-|phospholipase
MKKILFLIFFYSLVFCDDFEQALEFEKKGQYEKAMQIYKKLALQNSPKQDLKENNASLLSSIKHETQNTQKTPSTKEDFSRIALANYLGENSSFNPLGISSYKMNYFLPFAYSFGSLGGENRKTEMKFQLSIKKRLFEDLLGLGEKYYVGYTQTSWWQNYKHSSPFRETNYQPEFFVDIPLHFEDYKFLNNLRVGILHESNGKGDENLESRSWNRIYASSVFLYQRFLFVPRIWYRIPENSEDDDNPEITHYMGNFDINIGYLGNDYFINLMLRNNLDFHDNKGAVQVDIGYDIFDNGIYWYLQYFNGYGESLIDYNKRLQRLSTGFLISY
>NZ_CP017873.1|WP_002799191.1|348159_349128_-|ABC-transporter-permease
MLFKHLFSLNILLILLVVFGIISLFIGVIRINLDDIFSLSTTQLEIILLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIFFTGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIINAITTFFAYALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIAGMGEDLALNLGVSYNTILFLGLIIVSIITSVVIVSIGVIPFLGLIIPNLVAIYRGDNLKKNLIYIALCGALFLLICDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKTYA
>NZ_CP017873.1|WP_071305083.1|360424_361813_+|motility-associated-factor-glycosyltransferase-family-protein
MNLLEKNIQALLSGVNEPLGNKLLNFIQNKTCSRFNIDENLNIYDKTHNVFMYENLEEEINFFYQSILEKTHRYPFICIYGIGNALLIKNLAKHYKHLFVFESEIELFILALSTIDLSEELKVYKVILFDCVAKDLEIQIAMIFDQQSILEYLSLYEMFISSHYYLKYYETSILSLNELCIKSASVAIRNADITCFLPLLTHGQFLQNIPSMLESIPFQRILNERKNKFDNAIVVSAGPSLTKQLPLLKAYQDKAVIFCADGALSMLEKEGIVPDYVTNLDFTDLAMKFFQNKENLKQSIIALECATHPNIVRSLNAENCMIVLRNKALYQRFNLNDFGYIDTGTQIQKDQDNAKRFLDDALALKQILENILSKDFILPLEFLEKVYQNIENFNHSLDEDEFIQDEVLRGAFAYRGKMIADVLKLHIKDETHFITAYIKAYHEWLLYFIEKLEQKYKSLSKV
>NZ_CP017873.1|WP_079742536.1|363512_365399_-|motility-associated-factor-glycosyltransferase-family-protein
MREENNFNKNLKALSGFEYNNLRKKLEDLKELREFTFTQGKDNLDINIIKKRNLKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALKRIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQTIKNHNLMHGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNNDFKDFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQPFARCLGLDDYGYISGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSKTYNCTQGGARIESAIEKPFKELCEDLLENKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNFKKECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQSILTPLYLKDIKDESDKQNKLFAWIYAHESLIENIIELLEVQDKRLKIAILPLQDFLEKKKAL
>NZ_CP017873.1|WP_032588431.1|368297_368561_+|hypothetical-protein
MDIAETATTNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ
>NZ_CP017873.1|WP_002794569.1|370536_371307_-|flagellin-modification-protein-PtmA
MLENKIIFVAGACGRIGKALCQKILLSKGIPILADINKERLNKLQENLETNFKTKLLSLELDITKQESLQTALQKSQERYGKIDAFVNSSYPFGKDWGKTPYYELKYEQICESLNLHLAGFMLAAQEFVKFFKQQGYGNIINLSSIMGVYAPKFENYEGTSMQSSLEYSVIKAGINHMGTWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRKCCASKGMLDADDICGTLVFLLSDESKFITGQTLVVDDGWGL
>NZ_CP017873.1|WP_002788729.1|371306_372014_-|CMP-N,N'-diacetyllegionaminic-acid-synthase
MAEILCTICARGGSKGVKNKNIRKINELEMIAYSIIQAQNSKLFKHIVISTDSDEIASVAQKYDAEVFFKREAHLANDQAAKLPVMRDALLRSEEHFKTRFETLIDLDASAPLRSSLDIKKAYESFVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSKEGNFTTRQSAPKCYDMNASIYIFKRDYLLENDSVFGKNTGLFVMDESTAFDIDSELDFKIVEFLISLKNLSPKDF
>NZ_CP017873.1|WP_002798112.1|372006_372912_-|L-glutamine-D-fructose-6-phosphate-isomerase-subunit
MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIYRSLKECDLNEFDLFIIANITTEHFNTLKALNELVKDKIILVEKPLFEKSQNFTSLKNHIYVAYLLRFHPVIVALKRLLKGEKIYFASLICNSYLPHWRALDYRQNYSAKKELGGGVLLDLSHEIDLAFFLFGNLELIYSQNAKISELDITSDDFAFLVLKNSQKAKIHIELDYFSKFNKREIIIHTLEKSFKADLINNNIEIYHKNQSQKILNFENDTIKTLQNLHHAVFEKDKELCDLKQALKVLEICDEVRKKNG
>NZ_CP017873.1|WP_002788731.1|372908_373934_-|CBS-domain-containing-protein
MDINKLKLTPDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNPITIKENTSKEQLLRISAKTDIYDFPVLDEKGQILSIKSISSLLKANPNSIIIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIVQRLKNQNFENFIFCVNYKKQIIEDYFQKGQKFGVKISYIKERKKLGTAGALSLIKQEFKESFLVMNADILTELDFNDLLKAHKKSKALMSVCVREFEQQIPYGVITQKQGFIENIEEKPTQKFLVSAGIYVLENEILNLIAKNEYLDMPELIKLVLQKGKVNTYIINDYWIDIGRPDEFLKANEDFK
>NZ_CP017873.1|WP_052774947.1|373942_375097_-|GDP-N,N'-diacetylbacillosamine-2-epimerase-(hydrolyzing)
MSKRKICIVSATRAEWYLLRNLCHEIQNDKDLSLQIIATGAHLSPEFGLTYKEIEKEFKITKKIPILLANDDKISLCKSMSLAFSAFSDAFEDLKPDMVVILGDRYEMLSVASVCLLMHIPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKRLLQLGEEEKRVFNIGSLASTIIKNMNFLNKKDLEKALEMKLDKELYLITYHPLTLNVKNTQKEIKTLLKKLDTLKNASLIFTKANADENGLLINEILQDYCQKNSHKAKLFDNLGSQKYLSLMKIAKAMIGNSSSGISESPFFKTPCINIGDRQKGRLRTQNIIDCEINDLDQAFEKLESKEFKQILKNFKNPYDNDKNPNKFIKTCLKNVNLDTILHKNFIDL
>NZ_CP017873.1|WP_052779111.1|375089_376094_-|N,N'-diacetyllegionaminate-synthase
MKKTLIIAEAGVNHNGDLNLAKKLIEIAADSGADFVKFQSFKAKNCISTKAKKAPYQLKTTASDESQLQMVQKLELDLKAHKELILHAKKCNIAFLSTPFDLESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLGEIEEALNALCKNGTKRQNITLLHCTTEYPAPFDEVNLKAMQSLKDAFKLDVGYSDHTQGIHISLAAVALGACVIEKHFTLDKNMSGPDHKASLEPHELKTLCTQIRQIQKAMGDGIKKASKSERKNINIVRKSLVAKKDIQKGEIFNEENLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE
>NZ_CP017873.1|WP_002792714.1|376827_377949_-|N-acetyl-sugar-amidotransferase
MIYCDHCVMPNTRPGINFTKDKEGKNICSACINHKNKENIDYKARFKELEALCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFTMTEAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFAMALKFNTPLLVYGENVSYEYGGSDTEETPSAKEIFLNGVASDLNINEFIDDEIKEENLQLFFNPNKDKLDKLNPIYLSYFVKWNSYSNYIFAKSRGFTDLEGEWDRTMCAENFDQVDSIGYILHAWMKYPKFGHACASDYAARFVRYGLLSRKEAIELVQKRDHKLDNKCVEDFCNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNKLQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

739570 : 746991

Campylobacter_phage(87.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044600783.1\|739570_739789_-	hypothetical protein	X2KQZ7	Campylobacter_phage	5.0e-24	92.1
WP_057041742.1\|739685_740105_-	hypothetical protein	X2KX19	Campylobacter_phage	1.3e-47	85.4
WP_057035904.1\|740335_740797_-	hypothetical protein	X2KRD2	Campylobacter_phage	3.6e-80	94.8
WP_057992524.1\|740786_741260_-	hypothetical protein	NA	NA	NA	NA
WP_002810252.1\|741256_741637_-	hypothetical protein	X2KXD5	Campylobacter_phage	5.5e-58	95.2
WP_071305110.1\|741633_742269_-	DUF4376 domain-containing protein	X2KRD7	Campylobacter_phage	8.5e-88	90.5
WP_071305111.1\|742281_742731_-	hypothetical protein	X2KR34	Campylobacter_phage	1.0e-74	94.0
WP_071305112.1\|742732_743710_-	hypothetical protein	X2KLU0	Campylobacter_phage	1.6e-29	75.9
WP_071305113.1\|743713_745375_-	hypothetical protein	NA	NA	NA	NA
WP_044600670.1\|745377_745572_-	hypothetical protein	NA	NA	NA	NA
WP_002825884.1\|745552_745957_-	hypothetical protein	NA	NA	NA	NA
WP_071305114.1\|745956_746991_-	hypothetical protein	A0A2I7SBK1	Pseudomonas_phage	7.5e-17	30.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage