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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP015185 Corynebacterium pseudotuberculosis strain 35, complete genome 4 crisprs cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,DEDDh,WYL,cas4,csa3,DinG 1 0 3 0

Results visualization

1. NZ_CP015185
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015185_1 21678-21767 TypeI-E I-C,I-E,II-B
1 spacers
cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015185_2 26583-26654 TypeI-E NA
1 spacers
cas6e,cas3,cas1,cas2,cas8e,cse2gr11,cas7,cas5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015185_3 683778-683867 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP015185_4 1877997-1878148 Orphan I-C,I-E,II-B
2 spacers
DinG

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP015185_3 3.1|683801|44|NZ_CP015185|CRISPRCasFinder 683801-683844 44 NZ_CP015185.1 1100953-1100996 0 1.0

1. spacer 3.1|683801|44|NZ_CP015185|CRISPRCasFinder matches to position: 1100953-1100996, mismatch: 0, identity: 1.0

gtgttatgtaggaggaggtttttcttcttctacgttacacacac	CRISPR spacer
gtgttatgtaggaggaggtttttcttcttctacgttacacacac	Protospacer
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 145228 : 166861 30 Corynebacterium_phage(100.0%) capsid,integrase,portal,protease,head attL 139045:139058|attR 149211:149224
DBSCAN-SWA_2 172544 : 181564 10 Corynebacterium_phage(100.0%) holin NA
DBSCAN-SWA_3 1793566 : 1871273 59 Agrobacterium_phage(15.38%) protease,integrase,bacteriocin attL 1840436:1840463|attR 1846348:1846375
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage