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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017953 Bacillus amyloliquefaciens strain Y14, complete genome 1 crisprs csa3,DinG,cas3,DEDDh,WYL 0 2 8 0

Results visualization

1. NZ_CP017953
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017953_1 728673-729133 Orphan NA
7 spacers
DinG

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 CP011076 Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence 251976-252009 7 0.794
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 CP011076 Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence 251994-252027 7 0.794
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 CP013001 Bacillus thuringiensis strain XL6 plasmid, complete sequence 190921-190954 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NZ_CP004876 Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence 286452-286485 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NZ_CP004861 Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence 282307-282340 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NZ_CP011350 Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence 538234-538267 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NZ_CP013056 Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence 177297-177330 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NZ_CP016317 Bacillus cereus strain M3 plasmid pBCM301, complete sequence 156288-156321 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 CP011075 Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence 733195-733228 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 CP011075 Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence 733420-733453 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NC_011777 Bacillus cereus AH820 plasmid pAH820_272, complete sequence 124022-124055 8 0.765
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NC_014172 Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence 30094-30127 8 0.765
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 CP011076 Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence 251904-251937 8 0.765
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 NZ_CP009691 Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence 122462-122495 8 0.765
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 NZ_CP009691 Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence 122576-122609 8 0.765
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 NZ_CP009691 Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence 122633-122666 8 0.765
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 CP024687 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence 234536-234569 9 0.735
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 NZ_CP009691 Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence 122348-122381 9 0.735
NZ_CP017953_1 1.7|729080|34|NZ_CP017953|CRT 729080-729113 34 NZ_CP033045 Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence 283069-283102 9 0.735
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NZ_CP040338 Bacillus luti strain FJ plasmid unnamed2, complete sequence 11034-11067 11 0.676
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 NZ_CP040338 Bacillus luti strain FJ plasmid unnamed2, complete sequence 23213-23246 11 0.676
NZ_CP017953_1 1.4|728909|34|NZ_CP017953|CRT 728909-728942 34 MH059636 Erwinia phage Cronus, complete genome 94847-94880 11 0.676

1. spacer 1.7|729080|34|NZ_CP017953|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

tacaggaataacaggagcaaccggggtaacaggt	CRISPR spacer
aaccggggcaacaggagcaaccggggcaacagga	Protospacer
 ** **...*****************.****** 

2. spacer 1.7|729080|34|NZ_CP017953|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

tacaggaataacaggagcaaccggggtaacaggt	CRISPR spacer
aaccggggcaacaggagcaaccggggcaacaggg	Protospacer
 ** **...*****************.****** 

3. spacer 1.4|728909|34|NZ_CP017953|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
taccggatctactggacctaccggatcgactggg	Protospacer
 ****** ********.******** ..**.**.

4. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
taccggagcaactggacctaccggagatcctgga	Protospacer
 ******** ******.********.   *.***

5. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
taccggagcaactggacctaccggagatcctgga	Protospacer
 ******** ******.********.   *.***

6. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
taccggagcaactggacctaccggagatcctgga	Protospacer
 ******** ******.********.   *.***

7. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NZ_CP013056 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
taccggagcaactggacctaccggagatcctgga	Protospacer
 ******** ******.********.   *.***

8. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NZ_CP016317 (Bacillus cereus strain M3 plasmid pBCM301, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
taccggagctacaggacctaccggagctactggc	Protospacer
 *********** ***.********.. **.** 

9. spacer 1.4|728909|34|NZ_CP017953|CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
caccggcgctactggacctaccggagatactggc	Protospacer
 ***** *********.********.  **.** 

10. spacer 1.4|728909|34|NZ_CP017953|CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
caccggcgctactggacctaccggaggtactggc	Protospacer
 ***** *********.********.  **.** 

11. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NC_011777 (Bacillus cereus AH820 plasmid pAH820_272, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
taccggagctacaggacctaccggagctactggc	Protospacer
 *********** ***.********.. **.** 

12. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NC_014172 (Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequence) position: , mismatch: 8, identity: 0.765

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
taccggagctacaggacctaccggagctactggc	Protospacer
 *********** ***.********.. **.** 

13. spacer 1.7|729080|34|NZ_CP017953|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

tacaggaataacaggagcaaccggggtaacaggt	CRISPR spacer
aaccggggcaacaggagcaaccggggcaaccgga	Protospacer
 ** **...*****************.*** ** 

14. spacer 1.7|729080|34|NZ_CP017953|CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 8, identity: 0.765

tacaggaataacaggagcaaccggggtaacaggt	CRISPR spacer
tactggaataactggagcaaccggaccttctggt	Protospacer
*** ******** ***********. .  * ***

15. spacer 1.7|729080|34|NZ_CP017953|CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 8, identity: 0.765

tacaggaataacaggagcaaccggggtaacaggt	CRISPR spacer
tactggaataactggagcaaccggaccttctggt	Protospacer
*** ******** ***********. .  * ***

16. spacer 1.7|729080|34|NZ_CP017953|CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 8, identity: 0.765

tacaggaataacaggagcaaccggggtaacaggt	CRISPR spacer
tactggaataactggagcaaccggaccttctggt	Protospacer
*** ******** ***********. .  * ***

17. spacer 1.7|729080|34|NZ_CP017953|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 9, identity: 0.735

tacaggaataacaggagcaaccggggtaacaggt	CRISPR spacer
tggtggcccaacaggaccaacgggggtaacaggc	Protospacer
*.  **  .******* **** ***********.

18. spacer 1.7|729080|34|NZ_CP017953|CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 9, identity: 0.735

tacaggaataacaggagcaaccggggtaacaggt	CRISPR spacer
tactggaataactggagcaaccggaccttctagt	Protospacer
*** ******** ***********. .  * .**

19. spacer 1.7|729080|34|NZ_CP017953|CRT matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

tacaggaataacaggagcaaccggggtaacaggt-	CRISPR spacer
taaaggagtaacaggagcaacc-ggacagtgcgtt	Protospacer
** ****.************** **..*... ** 

20. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NZ_CP040338 (Bacillus luti strain FJ plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
tactggagctactggatctactggaactttttct	Protospacer
 **.*****************.****.  ..   

21. spacer 1.4|728909|34|NZ_CP017953|CRT matches to NZ_CP040338 (Bacillus luti strain FJ plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
tactggagctactggatctactggaactttttct	Protospacer
 **.*****************.****.  ..   

22. spacer 1.4|728909|34|NZ_CP017953|CRT matches to MH059636 (Erwinia phage Cronus, complete genome) position: , mismatch: 11, identity: 0.676

aaccggagctactggatctaccggaataaccgga	CRISPR spacer
tgaaggagcttctggatctacaggaatatcgatg	Protospacer
 .  ****** ********** ****** * . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 628627 : 638518 9 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 1171548 : 1207033 46 Bacillus_phage(35.48%) portal,terminase,holin,tail,plate NA
DBSCAN-SWA_3 1755122 : 1761336 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_4 2019678 : 2058029 47 Bacillus_phage(82.86%) portal,terminase,protease,capsid,holin,tail,integrase,head,plate attL 2022003:2022017|attR 2058046:2058060
DBSCAN-SWA_5 2150048 : 2214851 75 Bacillus_phage(39.47%) tRNA,portal,terminase,protease,capsid,holin,tail,coat,integrase,head,plate attL 2146625:2146684|attR 2190860:2190932
DBSCAN-SWA_6 2291788 : 2298041 9 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_7 2661997 : 2723088 60 uncultured_Mediterranean_phage(10.0%) transposase,tRNA,protease,coat NA
DBSCAN-SWA_8 3613420 : 3665788 53 Cafeteria_roenbergensis_virus(11.11%) tRNA,protease,coat NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage