CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013241	Clostridium botulinum strain CDC_67071 chromosome pNPD7, complete genome	6 crisprs	RT,c2c9_V-U4,cas14k,c2c10_CAS-V-U3,cas5,cas7b,cas8b1,cas6,cas14j	1	51	19	0
NZ_CP013242	Clostridium botulinum strain CDC_67071 chromosome, complete genome	4 crisprs	DEDDh,RT,cas14k,cas3,WYL,csa3,DinG	1	5	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013241_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013241_1

121747-122023

Orphan

Consensus_repeat	Method
AAAAGTGCACGATAAAAATGAAACACTTT	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP013241_1

>merge|NZ_CP013241|1|121747-122023|CRISPRCasFinder
AAAAGTGCACGATAAAAATGAAACACTTTTTGGAGCAAATAAAGCAAGCACAACAAATTAATATTATAAAAAAGTACACGATAAAAATGAAACACTTTCTTGAAACACTATATAATTACTAGTGTTGAAATTGAATATAATAAAATGATGATAAAATAAATCATAAAAGTACACGATAAAAGTGAAACACTTTTTATGAAATATAGTATAGATGTTAATTATAATATCAGATACTGTAATAAATCATAAAAGTACACGATAAAAGTGAAACAGTTTT

>NZ_CP013241|1|1|121747-122023|CRISPRCasFinder
AAAAGTGCACGATAAAAATGAAACACTTT	TTGGAGCAAATAAAGCAAGCACAACAAATTAATATTATAA
AAAAGTACACGATAAAAATGAAACACTTT	CTTGAAACACTATATAATTACTAGTGTTGAAATTGAATATAATAAAATGATGATAAAATAAATCAT
AAAAGTACACGATAAAAGTGAAACACTTT	TTATGAAATATAGTATAGATGTTAATTATAATATCAGATACTGTAATAAATCAT
AAAAGTACACGATAAAAGTGAAACAGTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013241.1\|WP_003362431.1\|124287_124545_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_167366122.1\|120632_121670_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_003404193.1\|128875_129412_+\|botulinum-neurotoxin-transcription-activating-sigma-factor-BotR	unknown	unknown	gnl\|CDD\|132253
NZ_CP013241.1\|WP_072587104.1\|117289_117628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_003362424.1\|138752_138965_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587108.1\|127765_128650_-\|ricin-type-beta-trefoil-lectin-domain-protein	unknown	unknown	gnl\|CDD\|214672
NZ_CP013241.1\|WP_072587103.1\|116644_116875_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587109.1\|133192_137068_+\|botulinum-neurotoxin-type-B	unknown	unknown	gnl\|CDD\|366783
NZ_CP013241.1\|WP_072587101.1\|115242_116310_+\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669
NZ_CP013241.1\|WP_045898418.1\|119402_119648_+\|sporulation-transcriptional-regulator-SpoIIID	unknown	unknown	gnl\|CDD\|378813
NZ_CP013241.1\|WP_072587328.1\|129573_133167_+\|non-toxic-nonhemagglutinin-NTNH	unknown	unknown	gnl\|CDD\|366783
NZ_CP013241.1\|WP_003404194.1\|127262_127703_-\|hemagglutinin-component-HA17	unknown	unknown	gnl\|CDD\|283282
NZ_CP013241.1\|WP_096043152.1\|117689_118568_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP013241.1\|WP_096043153.1\|118564_119242_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP013241.1\|WP_072587102.1\|116287_116605_+\|precorrin-4-C11-methyltransferase	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587105.1\|119889_120204_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274386
NZ_CP013241.1\|WP_072587106.1\|122338_123817_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_003404190.1\|139000_139168_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587326.1\|119680_119887_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181104
NZ_CP013241.1\|WP_072587107.1\|125368_127249_-\|botulinum-neurotoxin-hemagglutinin-HA70-subunit	unknown	unknown	gnl\|CDD\|308877

Protein	Function_ID	Function_description	E-value
NZ_CP013241.1\|WP_072587109.1\|133192_137068_+\|botulinum-neurotoxin-type-B	gnl\|CDD\|366783	pfam01742, Peptidase_M27, Clostridial neurotoxin zinc protease. These toxins are zinc proteases that block neurotransmitter release by proteolytic cleavage of synaptic proteins such as synaptobrevins, syntaxin and SNAP-25.	0
NZ_CP013241.1\|WP_003404193.1\|128875_129412_+\|botulinum-neurotoxin-transcription-activating-sigma-factor-BotR	gnl\|CDD\|132253	TIGR03209, P-21_partial, clostridium toxin-associated regulator BotR. Clostridium botulinum neurotoxin production is regulated by a regulatory sigma-70 protein, BotR transcription regulator. Similarly, tetanus toxin production of Clostridium tetani is regulated by TetR which is a very close relative of BotR. Both BotR and TetR are members of the TIGR02937 subfamily of sigma-70 RNA polymerase sigma factors. Functional complementation experiments have been done for botR and tetR in highly transformable strain of Clostridium perfringens host cells to assess functional interchangeability of sigma factors and it has been confirmed that they are interchangeable in vivo.	7.62906e-65
NZ_CP013241.1\|WP_072587108.1\|127765_128650_-\|ricin-type-beta-trefoil-lectin-domain-protein	gnl\|CDD\|214672	smart00458, RICIN, Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.	1.09062e-11
NZ_CP013241.1\|WP_072587101.1\|115242_116310_+\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	5.77118e-30
NZ_CP013241.1\|WP_045898418.1\|119402_119648_+\|sporulation-transcriptional-regulator-SpoIIID	gnl\|CDD\|378813	pfam12116, SpoIIID, Stage III sporulation protein D. This stage III sporulation protein is a small DNA-binding family that is essential for gene expression of the mother-cell compartment during sporulation. The domain is found in bacteria and viruses, and is about 40 amino acids in length. It has a conserved RGG sequence motif.	1.76595e-38
NZ_CP013241.1\|WP_003404194.1\|127262_127703_-\|hemagglutinin-component-HA17	gnl\|CDD\|283282	pfam05588, Botulinum_HA-17, Clostridium botulinum HA-17 domain. This family consists of several Clostridium botulinum hemagglutinin (HA) subcomponents. Clostridium botulinum type D strain 4947 produces two different sizes of progenitor toxins (M and L) as intact forms without proteolytic processing. The M toxin is composed of neurotoxin (NT) and nontoxic-nonhemagglutinin (NTNHA), whereas the L toxin is composed of the M toxin and hemagglutinin (HA) subcomponents (HA-70, HA-17, and HA-33).	1.99317e-74
NZ_CP013241.1\|WP_096043152.1\|117689_118568_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.29225e-54
NZ_CP013241.1\|WP_072587328.1\|129573_133167_+\|non-toxic-nonhemagglutinin-NTNH	gnl\|CDD\|366783	pfam01742, Peptidase_M27, Clostridial neurotoxin zinc protease. These toxins are zinc proteases that block neurotransmitter release by proteolytic cleavage of synaptic proteins such as synaptobrevins, syntaxin and SNAP-25.	1.16765e-140
NZ_CP013241.1\|WP_072587105.1\|119889_120204_+\|hypothetical-protein	gnl\|CDD\|274386	TIGR03007, pepcterm_ChnLen, polysaccharide chain length determinant protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide chain length determinant proteins (pfam02706). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0.00385203
NZ_CP013241.1\|WP_096043153.1\|118564_119242_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	2.10805e-07
NZ_CP013241.1\|WP_072587326.1\|119680_119887_+\|hypothetical-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	2.84712e-07
NZ_CP013241.1\|WP_072587107.1\|125368_127249_-\|botulinum-neurotoxin-hemagglutinin-HA70-subunit	gnl\|CDD\|308877	pfam03505, Clenterotox, Clostridium enterotoxin.	3.25318e-100

>NZ_CP013241.1|WP_167366122.1|120632_121670_-|hypothetical-protein
MALAIEKLFFNVSKKLIHFITEPIPLYHYETVLFNKCCYCPFYKKMQDKNIHNYCSNYCNNKYKKVIKKYKIYNNINIDKTHIQFSLTQIKQMLIYYYYANSKGFVSLISKKRIAKMIGCCEKTVDINNKLFSDLGLILISGTINNKFSLIIKDYSEHYNKNNTGYLNLATNVFKDLLHINNVNALRIALQGILKHDINTLLDRETYFSINSMKTFLPNYINCKSAIEKIINKLNNNTITMLFNSSEKLIFVISKNLHGKLLKKEMYYKYKNNFLNYITENNIKLNNLSNSINNIVKLAFEYGYDIVQLMLGEIKDIAPTIFNVGGYIRDKIKRYIYMNEPFFAV
>NZ_CP013241.1|WP_072587105.1|119889_120204_+|hypothetical-protein
MDKILYYVNNEVNTLLVTTEKKDHIHFIKINKREFLKYKKVGYTVITSAEMDFDLCLKMCNPTFREKIIAKIKNAIQNDYIIAEKRTDNKYTISVIDNNFELAL
>NZ_CP013241.1|WP_072587326.1|119680_119887_+|hypothetical-protein
MEKNKDELRELNLSITAYNSLRNMGINTLEDFSMYSKKQLCQFKGIGISSLRKIEKVLDKKNIKMEVI
>NZ_CP013241.1|WP_045898418.1|119402_119648_+|sporulation-transcriptional-regulator-SpoIIID
MKDYIRERALDVSNYVLNTKSTVRKTAKVFGVAKSTIHKDITERLPKINPEVAKKVKEILDYNKSERHIRGGQATKTKYKI
>NZ_CP013241.1|WP_096043153.1|118564_119242_-|helix-turn-helix-domain-containing-protein
MGRKGKVSLDDKIKAIKDYLTDKKSVSQICLELQIHRSAFDEWKRKYQLKGEKGLETIKRNTYYPETIKLQAISDYQNGIGSLNQICSKYDISNNCILRRWIKKYNGHKTSKSHNSQGDNHMTKGRKTSYEERVEIISFCIENNENYQLAAEKYKVSYQQVYSWTVKYKQSGTEALVDRRGKRKTSEELTEAEKLAAKIKLLEAENKRLQMENGFLKKLKEVERR
>NZ_CP013241.1|WP_096043152.1|117689_118568_-|IS3-family-transposase
MNWQNKYIAIKEYNYETKFSITEMCKIMGIARSAYYKWLNRTESKSDKENKVILNTIIRLFNEVQGVYGYRRMKLNINRILRKRYNHKRIYRLMKSINMKSVIRRKRKKYISSTPQITAENILDRNFYANKPNQKWLTDVTEFKLTDETKAYLSAILDLHDNSIISYALGKSNNNVLVLETFDKAVTSNPDASPLFHSDRGFQYTSKSFKNKLNEIGATQSMSRVGRCIDNGPMEGFWGIIKSEMYYLRKFHNFDELQLAINEYIKFYNTKRIQEKLKGLTPIEYRNQTIVS
>NZ_CP013241.1|WP_072587104.1|117289_117628_+|hypothetical-protein
MEKIFINKLNNNQKILVTEEYIELLEYKTSLSSISDLYYLKQTGFIEKCECSKGIKRNENLSGGGMNSCISIWNLRKGWKPVLKIILNLNEFNEVINLITKKIDNKNLFIKK
>NZ_CP013241.1|WP_072587103.1|116644_116875_-|hypothetical-protein
MNENLDIFQFGEYIINIFSEKKYKEIDVFFNDMHIKIDKESTVNNIVQSYTNEIVDSFQNTSNCNKIYSIFKRKDH
>NZ_CP013241.1|WP_072587102.1|116287_116605_+|precorrin-4-C11-methyltransferase
MTLKPLNRSVIAFYEDEVLDMTILEILNSITTKRNRSNKIKDILIEYFNEKYPEKFNETKNRLSENMEKKITPKKATTNKNNQPNKEDDALINLVENNKDKWGSL
>NZ_CP013241.1|WP_072587101.1|115242_116310_+|ParM/StbA-family-protein
MKNIVAGVDTGFGYGIGMTNDTEVIMKNYINNITEKEALNIANTIKELNNKNTLIKYNGKYFICGDACIERYPDTMQRLNRDRIKDEYHLIELLSIVGQLTKESEFNLYLCVGLPNRSKGDSKKFEDWLKGSAFEFSYLCNFGEVKKKVYIKDVTCLPQAYSPIFTLPRNEMNKTIFSVDIGHSTLDLMFIKNMQTVMASDTLLDGEGCIRIYNNLKQALIRQNEDKKITYYSYSQLQEILEKGNYSLYGEEQQIENILNRCLEEYAEYVFFTIENNMYKYMPTVDTFIFSGGLLNNNTFKTILSDKFKQAYKIPLLVQNNRSQYTIAEGLKEYSNIKYADKLEVVKANDIKAAK
>NZ_CP013241.1|WP_072587106.1|122338_123817_-|hypothetical-protein
MDIPEYLIETIFENIDQRLKQNFYNFYENLFNMDNKEENLKLFIKDIIQSEFIVAELTKSPDMDLHKTKHTFIAPDKINKLKRYNLQQIKQTKKRWYNSLFKKKKTNPFNIEIETANNNISLYGPEVFYNLYKVRNIEELKDIRAAQFKDWLDNSIFITDFFYLKSKTNKQINTAFNLDFIYNICTIISDKWNNNLNFIYMEYPKLLLDHPLVADGSGKIKVQKQTIIQQNQSNKDVKYKYNDYVSKDGITRILVPESNIDTKQSRLIDNKDLNILSNILKYKKADFLTNKTIVFNLIDIINNIYCSKTVRSYEDLRNRIAKMTLLKFNFFRTDNISGIPDAVYGIFSSYEYLDKSQNRVKVYVDSILYDKILKNQVYTIYNDKINQLNDDFAKTLVIYLQQEKLVLYTQGKNTTFLSYDYFSNLVRFRYKKEERNYKIIAQALENMKCNNIIIRDFKKHMNGFIITFLDTNQFEISDLFSNKNTSDILPMI
>NZ_CP013241.1|WP_003362431.1|124287_124545_+|hypothetical-protein
MKIKHPKVNEYYNYLKESFANVNLSEEHRMDIYKRIEIIEALVGLYEQKYEFDDEIIEDLKLKYRPVFPEELKNIQKNLEKTIIK
>NZ_CP013241.1|WP_072587107.1|125368_127249_-|botulinum-neurotoxin-hemagglutinin-HA70-subunit
MNSSIKKIYNDIQEKVINYSDTIDLADGNYVVSRGDGWILSRQNQILGGSVISNGSTGIVGDLRINDNAIPYYYPTPSFNEEYIKNNIQTVFANFTKANQIPIGFEFSKTAPSNKNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNPGEKINKDFYFLTNDKCILNEQFLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIEAGSSGSIIQPRLRNTTRPLFTTSNDAKFSQQYTEERLKDAFNVQLFNTSTSLFKFVEEAPSNKNICIKAYNTYEKYELIDYQNGSIVNKAEYYLPSLGYCEVTNAPSPESEVVKTQVAEDGFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGIVNNNPFYILFTVNTTGIYKINAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNYYIRVPQTSSNIENQIKFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYEFTIPGNFNNKDTSNIRLYTSYNQGIGTLFRVTETIDGYNLINIQQNLNLLNSTKSIRLLNGAIYILKVEVTELNNYNIRLHIDITN
>NZ_CP013241.1|WP_003404194.1|127262_127703_-|hemagglutinin-component-HA17
MSAERTFLPNGNYNIKSIFSDSLYLNTVSKSLTFSNGSSANNQKWNVEYMAENRCFKISNVAEPNKYLSYDNFGFISLDSLSNRCYWFPIKIAVNTYIMLSLNKVNDLDYAWDIYDTNENILSQPLLLLPNFDIYNSNQMFKLEKI
>NZ_CP013241.1|WP_072587108.1|127765_128650_-|ricin-type-beta-trefoil-lectin-domain-protein
MEHYSVIQNSLNDKIVTISCKADTNLFFYQAAGTDNVILFQQIRDYLERWRLIYDSNKAAYKIKSMNIHNTNLVLTWNSPTHNISTQQDSNADNQYWLLLKDIGNNSFIIASYKNPNLVLYADTVAHNLKLSTLNNSNYIKFIIEDYIISDLNNFTCKISPILASNKVVQQVAMTDLNVNLYTWNYGRNQKWTIRYNEEKAAYQFFNEILSNGVLTWIFSNGNTVRVSSNDQNNDAQYWLINPVPDNYRRYTIANLRDKTKVLDLYGGQTADGTAIQVFNSNGGNNQIWNISNP
>NZ_CP013241.1|WP_003404193.1|128875_129412_+|botulinum-neurotoxin-transcription-activating-sigma-factor-BotR
MNKLFLQIEMLKNDNEEFQEIFKHFEKTINIFTRKYNIYDNYNDILYHLWYTLKKVDLSNFNTQNDLERYISRTLKRYCLDICNKRKIDKKIIYNSEIADKKLSLIANSYSSYSEFEFNDLISILPDDQKKIIYMKFVEDIKEIDIAKKLNISRQSVYKNKIMALERLEPILKKLINM
>NZ_CP013241.1|WP_072587328.1|129573_133167_+|non-toxic-nonhemagglutinin-NTNH
MNINDNLSINSPVDNKNVVVVRARKTDTVFKAFKVAPNIWVAPERYYGESLSIDEEYKVDGGIYDSNFLSQDSEKDKFLQAIITLLKRINSTNAGEKLLSLISTAIPFPYGYIGGGYYAPNMITFGSAPKSNKKLNSLISSTIPFPYAGYRETNYLSSEDNKSFYASNIVIFGPGANIVENNTVFYKKEDAENGMGTMTEIWFQPFLTYKYDEFYIDPAIELIKCLIKSLYFLYGIKPSDDLVVPYRLRNELENMEYSQLNIVDLLVSGGIDPKFINTDPYWFIDNYFSNGKKIFEDHRNIYETEIEGNNAIGNDIKLRLKQKFRININDIWELNLNYFSKEFNIMMPDRFNNALKHFYRKQYYKIDYPENYSINGFVNGQINAQLSLSDRNQDIINKPEEIINLLNENNVSLMRSNIYGDGLKSTVDDFYSNYKIPYNRSYEYHFNNSNDSSLDKVNIGVIDNIPEIIDVNPYKENCDKFSPVQKVTSTREINTNIPWPINYLQAQNTNNEKFSLSSDFVEVVSSKDKSLVYSFLSNVMFYLDSIKDNSPIDTDKKYYLWVREIFRNYSFDITATQEINTNCGINKVVTWFGKALNILNTSDSFVEEFQNLGPISLINKKENLSMPIIEIYEIPNDMLGLPLNDLNEKLFNIYLKNILYFKKVYFNFLDQWWTEYYSQYFDLICMGKQSILAQEMLIKQIIQNKLQDLSKADISMDKLNLMNLATEKTFIDLSNESQIAINNINDFLNKSAICVFDTNIYPKFISFMEQCINNVNSNVTAFIQKCTNITEDEKLQLIKLNTFMNIDFEFFDIQSIKDLITSETDLIKEEKESDYNLFLFTLQEDNNKVIEDISGKNTLVKYSDSVSLVYGVNGDALYLKEPDESVSFSNKAFENGLTNSFSICFWLRNLGEDIITSKLIENKADNCGWEIYFENNGLVFSIVDCNGNEENIYLSDVISKNWYYISISIDRLRNQLLIFINDKLIANQSIEQILNIYSSNTISLVNGNNPIYIEGLSILNRSITSEEVVNNYFSYLNNSYIRDISGERLEYNKTYELYNYVFPENSLYEVTENNNIYLSIKDTNNLNIQGAKFKLINIDANKQYVQKWDEGVVCLLGDEEKYVDISSENNRIQLVNSKDTAKRIIFNNDIFMPNCLTFAYNNKYLSLSLRDRNYNWMICNNNDNIPKAAHLWALKGI
>NZ_CP013241.1|WP_072587109.1|133192_137068_+|botulinum-neurotoxin-type-B
MPVTINNFNYNDPIDNNNIIMMEPPFARGTGRYYKAFKITDRIWIIPERYTFGYKPEDFNKSSGIFNRDVCEYYDPDYLNTNDKKNIFLQTMIKLFNRIKSKPLGEKLLEMIINGIPYLGDRRVPLEEFNTNIASVTVNKLISNPGEVERKKGIFANLIIFGPGPVLNENETIDIGIQNHFASREGFGGIMQMKFCPEYVSVFNNVQENKGASIFNRRGYFSDPALILMHELIHVLHGLYGIKVDDLPIVPNEKKFFMQSTDAIQAEELYTFGGQDPSIITPSTDKSIYDKVLQNFRGIVDRLNKVLVCISDPNININIYKNKFKDKYKFVEDSEGKYSIDVESFDKLYKSLMFGFTETNIAENYKIKTRASYFSDSLPPVKIKNLLDNEIYTIEEGFNISDKDMEKEYRGQNKAINKQAYEEISKEHLAVYKIQMCKSVKAPGICIDVDNEDLFFIADKNSFSDDLSKNERIEYNTQSNYIENDFPINELILDTDLISKIELPSENTESLTDFNVDVPVYEKQPAIKKIFTDENTIFQYLYSQTFPLDIRDISLTSSFDDALLFSNKVYSFFSMDYIKTANKVVEAGLFAGWVKQIVNDFVIEANKSNTMDKIADISLIVPYIGLALNVGNETAKGNFENAFEIAGASILLEFIPELLIPVVGAFLLESYIDNKNKIIKTIDNALTKRNEKWSDMYGLIVAQWLSTVNTQFYTIKEGMYKALNYQAQALEEIIKYRYNIYSEKEKSNINIDFNDINSKLNEGINQAIDNINNFINGCSVSYLMKKMIPLAVEKLLDFDNTLKKNLLNYIDENKLYLIGSAEYEKSKVNKYLKTIMPFDLSIYTNDTILIEMFNKYNSEILNNIILNLRYKDNNLIDLSGYGAKVEVYDGVELNDKNQFKLTSSANSKIRVTQNQNIIFNSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNNSGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIREVIANGEIIFKLDGDIDRTQFIWMKYFSIFNTELSQSNIEERYKIQSYSEYLKDFWGNPLMYNKEYYMFNAGNKNSYIKLKKDSPVGEILTRSKYNQNSKYINYRDLYIGEKFIIRRKSNSQSINDDIVRKEDYIYLDFFNLNQEWRVYIYKYFKKEEEKLFLAPISDSDEFYNTIQIKEYDEQPTYSCQLLFKKDEESTDEIGLIGIHRFYESGIVFKEYKDYFCISKWYLKEVKRKPYNSKLGCNWQFIPKDEGWTE
>NZ_CP013241.1|WP_003362424.1|138752_138965_+|hypothetical-protein
MISIKRKDEIWNAIYAEPCLLDFNTLNTEELSFAIGIIISAGSRNSFKEDHFNKEQLKFLKKVFKELLKL
>NZ_CP013241.1|WP_003404190.1|139000_139168_+|hypothetical-protein
MIKTKLFTGVTVLEAVYDYQDFIKRNQNLEIISVNILKDNFVLLTYKMFKEDIKG

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Crispr_ID: NZ_CP013241_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013241_2

122143-122234

Orphan

Consensus_repeat	Method
AAAAGTGCACGATAAAAATGAAACACTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013241_2

>merge|NZ_CP013241|2|122143-122234|CRISPRCasFinder
AAAAGTGCACGACAAAAGTGAAACACTTTTTGTTTGTCTTATAAAAAATACTAAATATATTTAAAAAGTACACGATAAAAATAAAACATTTT

>NZ_CP013241|2|2|122143-122234|CRISPRCasFinder
AAAAGTGCACGACAAAAGTGAAACACTTT	TTGTTTGTCTTATAAAAAATACTAAATATATTTA
AAAAGTACACGATAAAAATAAAACATTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013241.1\|WP_003362431.1\|124287_124545_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_167366122.1\|120632_121670_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_003404193.1\|128875_129412_+\|botulinum-neurotoxin-transcription-activating-sigma-factor-BotR	unknown	unknown	gnl\|CDD\|132253
NZ_CP013241.1\|WP_072587104.1\|117289_117628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_003362424.1\|138752_138965_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587108.1\|127765_128650_-\|ricin-type-beta-trefoil-lectin-domain-protein	unknown	unknown	gnl\|CDD\|214672
NZ_CP013241.1\|WP_072587103.1\|116644_116875_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587109.1\|133192_137068_+\|botulinum-neurotoxin-type-B	unknown	unknown	gnl\|CDD\|366783
NZ_CP013241.1\|WP_072587101.1\|115242_116310_+\|ParM/StbA-family-protein	unknown	unknown	gnl\|CDD\|212669
NZ_CP013241.1\|WP_045898418.1\|119402_119648_+\|sporulation-transcriptional-regulator-SpoIIID	unknown	unknown	gnl\|CDD\|378813
NZ_CP013241.1\|WP_072587328.1\|129573_133167_+\|non-toxic-nonhemagglutinin-NTNH	unknown	unknown	gnl\|CDD\|366783
NZ_CP013241.1\|WP_003404194.1\|127262_127703_-\|hemagglutinin-component-HA17	unknown	unknown	gnl\|CDD\|283282
NZ_CP013241.1\|WP_096043152.1\|117689_118568_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP013241.1\|WP_096043153.1\|118564_119242_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP013241.1\|WP_072587102.1\|116287_116605_+\|precorrin-4-C11-methyltransferase	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587105.1\|119889_120204_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274386
NZ_CP013241.1\|WP_072587106.1\|122338_123817_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_003404190.1\|139000_139168_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587326.1\|119680_119887_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|181104
NZ_CP013241.1\|WP_072587107.1\|125368_127249_-\|botulinum-neurotoxin-hemagglutinin-HA70-subunit	unknown	unknown	gnl\|CDD\|308877

Protein	Function_ID	Function_description	E-value
NZ_CP013241.1\|WP_072587109.1\|133192_137068_+\|botulinum-neurotoxin-type-B	gnl\|CDD\|366783	pfam01742, Peptidase_M27, Clostridial neurotoxin zinc protease. These toxins are zinc proteases that block neurotransmitter release by proteolytic cleavage of synaptic proteins such as synaptobrevins, syntaxin and SNAP-25.	0
NZ_CP013241.1\|WP_003404193.1\|128875_129412_+\|botulinum-neurotoxin-transcription-activating-sigma-factor-BotR	gnl\|CDD\|132253	TIGR03209, P-21_partial, clostridium toxin-associated regulator BotR. Clostridium botulinum neurotoxin production is regulated by a regulatory sigma-70 protein, BotR transcription regulator. Similarly, tetanus toxin production of Clostridium tetani is regulated by TetR which is a very close relative of BotR. Both BotR and TetR are members of the TIGR02937 subfamily of sigma-70 RNA polymerase sigma factors. Functional complementation experiments have been done for botR and tetR in highly transformable strain of Clostridium perfringens host cells to assess functional interchangeability of sigma factors and it has been confirmed that they are interchangeable in vivo.	7.62906e-65
NZ_CP013241.1\|WP_072587108.1\|127765_128650_-\|ricin-type-beta-trefoil-lectin-domain-protein	gnl\|CDD\|214672	smart00458, RICIN, Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.	1.09062e-11
NZ_CP013241.1\|WP_072587101.1\|115242_116310_+\|ParM/StbA-family-protein	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	5.77118e-30
NZ_CP013241.1\|WP_045898418.1\|119402_119648_+\|sporulation-transcriptional-regulator-SpoIIID	gnl\|CDD\|378813	pfam12116, SpoIIID, Stage III sporulation protein D. This stage III sporulation protein is a small DNA-binding family that is essential for gene expression of the mother-cell compartment during sporulation. The domain is found in bacteria and viruses, and is about 40 amino acids in length. It has a conserved RGG sequence motif.	1.76595e-38
NZ_CP013241.1\|WP_003404194.1\|127262_127703_-\|hemagglutinin-component-HA17	gnl\|CDD\|283282	pfam05588, Botulinum_HA-17, Clostridium botulinum HA-17 domain. This family consists of several Clostridium botulinum hemagglutinin (HA) subcomponents. Clostridium botulinum type D strain 4947 produces two different sizes of progenitor toxins (M and L) as intact forms without proteolytic processing. The M toxin is composed of neurotoxin (NT) and nontoxic-nonhemagglutinin (NTNHA), whereas the L toxin is composed of the M toxin and hemagglutinin (HA) subcomponents (HA-70, HA-17, and HA-33).	1.99317e-74
NZ_CP013241.1\|WP_096043152.1\|117689_118568_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.29225e-54
NZ_CP013241.1\|WP_072587328.1\|129573_133167_+\|non-toxic-nonhemagglutinin-NTNH	gnl\|CDD\|366783	pfam01742, Peptidase_M27, Clostridial neurotoxin zinc protease. These toxins are zinc proteases that block neurotransmitter release by proteolytic cleavage of synaptic proteins such as synaptobrevins, syntaxin and SNAP-25.	1.16765e-140
NZ_CP013241.1\|WP_072587105.1\|119889_120204_+\|hypothetical-protein	gnl\|CDD\|274386	TIGR03007, pepcterm_ChnLen, polysaccharide chain length determinant protein, PEP-CTERM locus subfamily. Members of this protein family belong to the family of polysaccharide chain length determinant proteins (pfam02706). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0.00385203
NZ_CP013241.1\|WP_096043153.1\|118564_119242_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	2.10805e-07
NZ_CP013241.1\|WP_072587326.1\|119680_119887_+\|hypothetical-protein	gnl\|CDD\|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	2.84712e-07
NZ_CP013241.1\|WP_072587107.1\|125368_127249_-\|botulinum-neurotoxin-hemagglutinin-HA70-subunit	gnl\|CDD\|308877	pfam03505, Clenterotox, Clostridium enterotoxin.	3.25318e-100

>NZ_CP013241.1|WP_167366122.1|120632_121670_-|hypothetical-protein
MALAIEKLFFNVSKKLIHFITEPIPLYHYETVLFNKCCYCPFYKKMQDKNIHNYCSNYCNNKYKKVIKKYKIYNNINIDKTHIQFSLTQIKQMLIYYYYANSKGFVSLISKKRIAKMIGCCEKTVDINNKLFSDLGLILISGTINNKFSLIIKDYSEHYNKNNTGYLNLATNVFKDLLHINNVNALRIALQGILKHDINTLLDRETYFSINSMKTFLPNYINCKSAIEKIINKLNNNTITMLFNSSEKLIFVISKNLHGKLLKKEMYYKYKNNFLNYITENNIKLNNLSNSINNIVKLAFEYGYDIVQLMLGEIKDIAPTIFNVGGYIRDKIKRYIYMNEPFFAV
>NZ_CP013241.1|WP_072587105.1|119889_120204_+|hypothetical-protein
MDKILYYVNNEVNTLLVTTEKKDHIHFIKINKREFLKYKKVGYTVITSAEMDFDLCLKMCNPTFREKIIAKIKNAIQNDYIIAEKRTDNKYTISVIDNNFELAL
>NZ_CP013241.1|WP_072587326.1|119680_119887_+|hypothetical-protein
MEKNKDELRELNLSITAYNSLRNMGINTLEDFSMYSKKQLCQFKGIGISSLRKIEKVLDKKNIKMEVI
>NZ_CP013241.1|WP_045898418.1|119402_119648_+|sporulation-transcriptional-regulator-SpoIIID
MKDYIRERALDVSNYVLNTKSTVRKTAKVFGVAKSTIHKDITERLPKINPEVAKKVKEILDYNKSERHIRGGQATKTKYKI
>NZ_CP013241.1|WP_096043153.1|118564_119242_-|helix-turn-helix-domain-containing-protein
MGRKGKVSLDDKIKAIKDYLTDKKSVSQICLELQIHRSAFDEWKRKYQLKGEKGLETIKRNTYYPETIKLQAISDYQNGIGSLNQICSKYDISNNCILRRWIKKYNGHKTSKSHNSQGDNHMTKGRKTSYEERVEIISFCIENNENYQLAAEKYKVSYQQVYSWTVKYKQSGTEALVDRRGKRKTSEELTEAEKLAAKIKLLEAENKRLQMENGFLKKLKEVERR
>NZ_CP013241.1|WP_096043152.1|117689_118568_-|IS3-family-transposase
MNWQNKYIAIKEYNYETKFSITEMCKIMGIARSAYYKWLNRTESKSDKENKVILNTIIRLFNEVQGVYGYRRMKLNINRILRKRYNHKRIYRLMKSINMKSVIRRKRKKYISSTPQITAENILDRNFYANKPNQKWLTDVTEFKLTDETKAYLSAILDLHDNSIISYALGKSNNNVLVLETFDKAVTSNPDASPLFHSDRGFQYTSKSFKNKLNEIGATQSMSRVGRCIDNGPMEGFWGIIKSEMYYLRKFHNFDELQLAINEYIKFYNTKRIQEKLKGLTPIEYRNQTIVS
>NZ_CP013241.1|WP_072587104.1|117289_117628_+|hypothetical-protein
MEKIFINKLNNNQKILVTEEYIELLEYKTSLSSISDLYYLKQTGFIEKCECSKGIKRNENLSGGGMNSCISIWNLRKGWKPVLKIILNLNEFNEVINLITKKIDNKNLFIKK
>NZ_CP013241.1|WP_072587103.1|116644_116875_-|hypothetical-protein
MNENLDIFQFGEYIINIFSEKKYKEIDVFFNDMHIKIDKESTVNNIVQSYTNEIVDSFQNTSNCNKIYSIFKRKDH
>NZ_CP013241.1|WP_072587102.1|116287_116605_+|precorrin-4-C11-methyltransferase
MTLKPLNRSVIAFYEDEVLDMTILEILNSITTKRNRSNKIKDILIEYFNEKYPEKFNETKNRLSENMEKKITPKKATTNKNNQPNKEDDALINLVENNKDKWGSL
>NZ_CP013241.1|WP_072587101.1|115242_116310_+|ParM/StbA-family-protein
MKNIVAGVDTGFGYGIGMTNDTEVIMKNYINNITEKEALNIANTIKELNNKNTLIKYNGKYFICGDACIERYPDTMQRLNRDRIKDEYHLIELLSIVGQLTKESEFNLYLCVGLPNRSKGDSKKFEDWLKGSAFEFSYLCNFGEVKKKVYIKDVTCLPQAYSPIFTLPRNEMNKTIFSVDIGHSTLDLMFIKNMQTVMASDTLLDGEGCIRIYNNLKQALIRQNEDKKITYYSYSQLQEILEKGNYSLYGEEQQIENILNRCLEEYAEYVFFTIENNMYKYMPTVDTFIFSGGLLNNNTFKTILSDKFKQAYKIPLLVQNNRSQYTIAEGLKEYSNIKYADKLEVVKANDIKAAK
>NZ_CP013241.1|WP_072587106.1|122338_123817_-|hypothetical-protein
MDIPEYLIETIFENIDQRLKQNFYNFYENLFNMDNKEENLKLFIKDIIQSEFIVAELTKSPDMDLHKTKHTFIAPDKINKLKRYNLQQIKQTKKRWYNSLFKKKKTNPFNIEIETANNNISLYGPEVFYNLYKVRNIEELKDIRAAQFKDWLDNSIFITDFFYLKSKTNKQINTAFNLDFIYNICTIISDKWNNNLNFIYMEYPKLLLDHPLVADGSGKIKVQKQTIIQQNQSNKDVKYKYNDYVSKDGITRILVPESNIDTKQSRLIDNKDLNILSNILKYKKADFLTNKTIVFNLIDIINNIYCSKTVRSYEDLRNRIAKMTLLKFNFFRTDNISGIPDAVYGIFSSYEYLDKSQNRVKVYVDSILYDKILKNQVYTIYNDKINQLNDDFAKTLVIYLQQEKLVLYTQGKNTTFLSYDYFSNLVRFRYKKEERNYKIIAQALENMKCNNIIIRDFKKHMNGFIITFLDTNQFEISDLFSNKNTSDILPMI
>NZ_CP013241.1|WP_003362431.1|124287_124545_+|hypothetical-protein
MKIKHPKVNEYYNYLKESFANVNLSEEHRMDIYKRIEIIEALVGLYEQKYEFDDEIIEDLKLKYRPVFPEELKNIQKNLEKTIIK
>NZ_CP013241.1|WP_072587107.1|125368_127249_-|botulinum-neurotoxin-hemagglutinin-HA70-subunit
MNSSIKKIYNDIQEKVINYSDTIDLADGNYVVSRGDGWILSRQNQILGGSVISNGSTGIVGDLRINDNAIPYYYPTPSFNEEYIKNNIQTVFANFTKANQIPIGFEFSKTAPSNKNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNPGEKINKDFYFLTNDKCILNEQFLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIEAGSSGSIIQPRLRNTTRPLFTTSNDAKFSQQYTEERLKDAFNVQLFNTSTSLFKFVEEAPSNKNICIKAYNTYEKYELIDYQNGSIVNKAEYYLPSLGYCEVTNAPSPESEVVKTQVAEDGFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGIVNNNPFYILFTVNTTGIYKINAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNYYIRVPQTSSNIENQIKFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYEFTIPGNFNNKDTSNIRLYTSYNQGIGTLFRVTETIDGYNLINIQQNLNLLNSTKSIRLLNGAIYILKVEVTELNNYNIRLHIDITN
>NZ_CP013241.1|WP_003404194.1|127262_127703_-|hemagglutinin-component-HA17
MSAERTFLPNGNYNIKSIFSDSLYLNTVSKSLTFSNGSSANNQKWNVEYMAENRCFKISNVAEPNKYLSYDNFGFISLDSLSNRCYWFPIKIAVNTYIMLSLNKVNDLDYAWDIYDTNENILSQPLLLLPNFDIYNSNQMFKLEKI
>NZ_CP013241.1|WP_072587108.1|127765_128650_-|ricin-type-beta-trefoil-lectin-domain-protein
MEHYSVIQNSLNDKIVTISCKADTNLFFYQAAGTDNVILFQQIRDYLERWRLIYDSNKAAYKIKSMNIHNTNLVLTWNSPTHNISTQQDSNADNQYWLLLKDIGNNSFIIASYKNPNLVLYADTVAHNLKLSTLNNSNYIKFIIEDYIISDLNNFTCKISPILASNKVVQQVAMTDLNVNLYTWNYGRNQKWTIRYNEEKAAYQFFNEILSNGVLTWIFSNGNTVRVSSNDQNNDAQYWLINPVPDNYRRYTIANLRDKTKVLDLYGGQTADGTAIQVFNSNGGNNQIWNISNP
>NZ_CP013241.1|WP_003404193.1|128875_129412_+|botulinum-neurotoxin-transcription-activating-sigma-factor-BotR
MNKLFLQIEMLKNDNEEFQEIFKHFEKTINIFTRKYNIYDNYNDILYHLWYTLKKVDLSNFNTQNDLERYISRTLKRYCLDICNKRKIDKKIIYNSEIADKKLSLIANSYSSYSEFEFNDLISILPDDQKKIIYMKFVEDIKEIDIAKKLNISRQSVYKNKIMALERLEPILKKLINM
>NZ_CP013241.1|WP_072587328.1|129573_133167_+|non-toxic-nonhemagglutinin-NTNH
MNINDNLSINSPVDNKNVVVVRARKTDTVFKAFKVAPNIWVAPERYYGESLSIDEEYKVDGGIYDSNFLSQDSEKDKFLQAIITLLKRINSTNAGEKLLSLISTAIPFPYGYIGGGYYAPNMITFGSAPKSNKKLNSLISSTIPFPYAGYRETNYLSSEDNKSFYASNIVIFGPGANIVENNTVFYKKEDAENGMGTMTEIWFQPFLTYKYDEFYIDPAIELIKCLIKSLYFLYGIKPSDDLVVPYRLRNELENMEYSQLNIVDLLVSGGIDPKFINTDPYWFIDNYFSNGKKIFEDHRNIYETEIEGNNAIGNDIKLRLKQKFRININDIWELNLNYFSKEFNIMMPDRFNNALKHFYRKQYYKIDYPENYSINGFVNGQINAQLSLSDRNQDIINKPEEIINLLNENNVSLMRSNIYGDGLKSTVDDFYSNYKIPYNRSYEYHFNNSNDSSLDKVNIGVIDNIPEIIDVNPYKENCDKFSPVQKVTSTREINTNIPWPINYLQAQNTNNEKFSLSSDFVEVVSSKDKSLVYSFLSNVMFYLDSIKDNSPIDTDKKYYLWVREIFRNYSFDITATQEINTNCGINKVVTWFGKALNILNTSDSFVEEFQNLGPISLINKKENLSMPIIEIYEIPNDMLGLPLNDLNEKLFNIYLKNILYFKKVYFNFLDQWWTEYYSQYFDLICMGKQSILAQEMLIKQIIQNKLQDLSKADISMDKLNLMNLATEKTFIDLSNESQIAINNINDFLNKSAICVFDTNIYPKFISFMEQCINNVNSNVTAFIQKCTNITEDEKLQLIKLNTFMNIDFEFFDIQSIKDLITSETDLIKEEKESDYNLFLFTLQEDNNKVIEDISGKNTLVKYSDSVSLVYGVNGDALYLKEPDESVSFSNKAFENGLTNSFSICFWLRNLGEDIITSKLIENKADNCGWEIYFENNGLVFSIVDCNGNEENIYLSDVISKNWYYISISIDRLRNQLLIFINDKLIANQSIEQILNIYSSNTISLVNGNNPIYIEGLSILNRSITSEEVVNNYFSYLNNSYIRDISGERLEYNKTYELYNYVFPENSLYEVTENNNIYLSIKDTNNLNIQGAKFKLINIDANKQYVQKWDEGVVCLLGDEEKYVDISSENNRIQLVNSKDTAKRIIFNNDIFMPNCLTFAYNNKYLSLSLRDRNYNWMICNNNDNIPKAAHLWALKGI
>NZ_CP013241.1|WP_072587109.1|133192_137068_+|botulinum-neurotoxin-type-B
MPVTINNFNYNDPIDNNNIIMMEPPFARGTGRYYKAFKITDRIWIIPERYTFGYKPEDFNKSSGIFNRDVCEYYDPDYLNTNDKKNIFLQTMIKLFNRIKSKPLGEKLLEMIINGIPYLGDRRVPLEEFNTNIASVTVNKLISNPGEVERKKGIFANLIIFGPGPVLNENETIDIGIQNHFASREGFGGIMQMKFCPEYVSVFNNVQENKGASIFNRRGYFSDPALILMHELIHVLHGLYGIKVDDLPIVPNEKKFFMQSTDAIQAEELYTFGGQDPSIITPSTDKSIYDKVLQNFRGIVDRLNKVLVCISDPNININIYKNKFKDKYKFVEDSEGKYSIDVESFDKLYKSLMFGFTETNIAENYKIKTRASYFSDSLPPVKIKNLLDNEIYTIEEGFNISDKDMEKEYRGQNKAINKQAYEEISKEHLAVYKIQMCKSVKAPGICIDVDNEDLFFIADKNSFSDDLSKNERIEYNTQSNYIENDFPINELILDTDLISKIELPSENTESLTDFNVDVPVYEKQPAIKKIFTDENTIFQYLYSQTFPLDIRDISLTSSFDDALLFSNKVYSFFSMDYIKTANKVVEAGLFAGWVKQIVNDFVIEANKSNTMDKIADISLIVPYIGLALNVGNETAKGNFENAFEIAGASILLEFIPELLIPVVGAFLLESYIDNKNKIIKTIDNALTKRNEKWSDMYGLIVAQWLSTVNTQFYTIKEGMYKALNYQAQALEEIIKYRYNIYSEKEKSNINIDFNDINSKLNEGINQAIDNINNFINGCSVSYLMKKMIPLAVEKLLDFDNTLKKNLLNYIDENKLYLIGSAEYEKSKVNKYLKTIMPFDLSIYTNDTILIEMFNKYNSEILNNIILNLRYKDNNLIDLSGYGAKVEVYDGVELNDKNQFKLTSSANSKIRVTQNQNIIFNSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNNSGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIREVIANGEIIFKLDGDIDRTQFIWMKYFSIFNTELSQSNIEERYKIQSYSEYLKDFWGNPLMYNKEYYMFNAGNKNSYIKLKKDSPVGEILTRSKYNQNSKYINYRDLYIGEKFIIRRKSNSQSINDDIVRKEDYIYLDFFNLNQEWRVYIYKYFKKEEEKLFLAPISDSDEFYNTIQIKEYDEQPTYSCQLLFKKDEESTDEIGLIGIHRFYESGIVFKEYKDYFCISKWYLKEVKRKPYNSKLGCNWQFIPKDEGWTE
>NZ_CP013241.1|WP_003362424.1|138752_138965_+|hypothetical-protein
MISIKRKDEIWNAIYAEPCLLDFNTLNTEELSFAIGIIISAGSRNSFKEDHFNKEQLKFLKKVFKELLKL
>NZ_CP013241.1|WP_003404190.1|139000_139168_+|hypothetical-protein
MIKTKLFTGVTVLEAVYDYQDFIKRNQNLEIISVNILKDNFVLLTYKMFKEDIKG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013241_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013241_3

173745-174016

TypeV,TypeI-B

II-B

Consensus_repeat	Method
TTTAAATACATCTAATGTAGAAGTTAAA	CRISPRCasFinder

4 spacers

c2c10_CAS-V-U3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NZ_CP013241_3

>merge|NZ_CP013241|3|173745-174016|CRISPRCasFinder
TTTAAATACATTTAATGTAGAAGTTAAACAAATAATAGTACATAGTTGTGCTTTAAATACATATAATGCAGAAGTTAAACTCGATTTTTTTTAAAAGTAATAACAACCTATTTTAAATACATCTAATGTAGAAGTTAAATATACGTATATTTACAAATGAGAGAACAAATTAATTGTTTAAATACATCTAATGTAAAAGTTAAACATATAAAGCCACTAGAGCTTACAATGAAAACAACCATCTTTAAATATATCTCATATAAAAGTTAAAT

>NZ_CP013241|3|3|173745-174016|CRISPRCasFinder
TTTAAATACATTTAATGTAGAAGTTAAA	CAAATAATAGTACATAGTTGTGC
TTTAAATACATATAATGCAGAAGTTAAA	CTCGATTTTTTTTAAAAGTAATAACAACCTAT
TTTAAATACATCTAATGTAGAAGTTAAA	TATACGTATATTTACAAATGAGAGAACAAATTAATTG
TTTAAATACATCTAATGTAAAAGTTAAA	CATATAAAGCCACTAGAGCTTACAATGAAAACAACCATC
TTTAAATATATCTCATATAAAAGTTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013241.1\|WP_072586996.1\|171548_171782_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043154.1\|184079_184664_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_045896596.1\|168177_168363_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_039698860.1\|177348_178287_-\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP013241.1\|WP_072586997.1\|171800_172445_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_045896601.1\|170966_171413_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_CP013241.1\|WP_072587001.1\|178336_180202_-\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NZ_CP013241.1\|WP_003362366.1\|169630_170773_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c10_CAS-V-U3	-	gnl\|CDD\|223747
NZ_CP013241.1\|WP_045897182.1\|173328_173556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_172819776.1\|167597_167738_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072586999.1\|175648_175912_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587004.1\|185091_186036_+\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP013241.1\|WP_072586994.1\|167759_168152_+\|LemA-family-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587002.1\|180228_180960_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP013241.1\|WP_045896539.1\|184739_184973_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_052705815.1\|174027_174366_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072586995.1\|168443_169472_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP013241.1\|WP_096043155.1\|186154_186343_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587000.1\|176497_177259_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP013241.1\|WP_072586998.1\|172498_172969_-\|5'-nucleotidase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013241.1\|WP_003362366.1\|169630_170773_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.97954e-25
NZ_CP013241.1\|WP_072586995.1\|168443_169472_+\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.37024e-39
NZ_CP013241.1\|WP_072587004.1\|185091_186036_+\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	1.42742e-64
NZ_CP013241.1\|WP_039698860.1\|177348_178287_-\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	3.24462e-20
NZ_CP013241.1\|WP_045896601.1\|170966_171413_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	8.02006e-46
NZ_CP013241.1\|WP_072587000.1\|176497_177259_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	2.32864e-35
NZ_CP013241.1\|WP_072587002.1\|180228_180960_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.66639e-10

>NZ_CP013241.1|WP_045897182.1|173328_173556_+|hypothetical-protein
MSNMSYCRFQNTVEDLEECLNVLTDREELSIRENNAAKRMLKNIAEWIRAECIIDGDGEIDYEEIESIINQCKGK
>NZ_CP013241.1|WP_072586998.1|172498_172969_-|5'-nucleotidase
MKNYFKNYVNHIIFICIAVEILSLIILISRKCSIENIILLYILPFILVLFITILNNFKDNNKSNIDDKYELIDTLDLYHSKNQFIQKKEINNEIIYCFSCIDREQNISTEIIKENTENHVIVKKINHYKAYVEIYKNIYDKKNVYIIYLPKRLALT
>NZ_CP013241.1|WP_072586997.1|171800_172445_+|hypothetical-protein
MMLNINKKLMNLPDNKKEKVKKTINNNSYTKQIFNLINIMLEKELTQEQMKKFAKLNLLILKRQSKLCIEEYKMYFSIKKQFPVKFNEDNTGYENNIRSSIDLNMYISDTVKTICIVGTALSSQIDEIQEKNIISEHELCQILSLNYILWTKNKKKVERKMENPKWSDIMYIYDCETVYNRKIAIDKGFWNTSPVYTALTESKLKNDLCCSKKQ
>NZ_CP013241.1|WP_072586996.1|171548_171782_+|hypothetical-protein
MNLNKQITKHLIEMDYNNINNFKKDIISNKEIDIIKKIDIISTLNVAITVINESKGINNIDNDNLINIKDDFKFAFI
>NZ_CP013241.1|WP_045896601.1|170966_171413_+|single-stranded-DNA-binding-protein
MNKVVLIGRLTKDPELKFTPGNGTAVANFTLAVDRRFSKDGQREADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRSYEAKDGTKRYITEVIAEEVKFLEWGDKATTDSSYNNRSESSYQSGQNFANGNSFDDDIIPVDDGDIPF
>NZ_CP013241.1|WP_003362366.1|169630_170773_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MKGVDIIEITITSKIQIYPTNEQIDILNNTMFQIRKALNYISKYIFNNNCLNQKKINEDTYYYLRETYGLKSQMAQSCIKTTIAKYKTNKSNGHDFTLVHFKNLEYDIVWNRDYSIKSDIFSINSLQGRLKIPYETKGMEKYFDGSYSFGTAKLVFKFNKYFLYIPMTKDYPQTTPFEINKIVGIDLGINFLATIYDSYGKTTFYNGRHIKAKRGHYKILRKQLQQCGSKSARRKIKSIGSRENRYVNDINHTITKALVDKYGANTLFVLEDLTNVRNTTEKVNINNRYVSVSWTFYQFRQLLEYKAKMNNSIVISVNPKYTSQTCPKCGHIEKANRDKKKHIFKCKNCNYQSNDDRIGSINLWRKGLEYIEQFSKEHSE
>NZ_CP013241.1|WP_072586995.1|168443_169472_+|C40-family-peptidase
MIKNKLKIILCSAIIGGSIIGFYHPIVNAAPTEKDVTIEIQKLDNDLSNLTIKLNDNKDKNSRLVNEIKQNEKFIQNKKEEIKETENMLNAQMRDYYIENDSNSNNALVLLLSSENMSDFLNKAKIMKIVLEEGNTTIKTLEKDKQDIIKTNEKLSKDKKEIEKNTSSIKNDIKTIDDKKKELKVKLEELDKAKINNASNTNSIIAQQNHAEYNDFLKIGSVVNSKNDIGNSVVNLATKFLGVPYVWGGTTPQGFDCSGLVLYCYNAYGISLPRISQEQQQVGIDVLLSQAKAGDLVFFHGYPATHVGIYMGNGYYIHAPHTGDVVKISPLGDYTNIKRIMP
>NZ_CP013241.1|WP_045896596.1|168177_168363_-|hypothetical-protein
MEKIFKIIYLLPFDSSNSEGYSKSTTAENATDKLKLYLADKYNIDFADIAILSCTSIEIIQ
>NZ_CP013241.1|WP_072586994.1|167759_168152_+|LemA-family-protein
MYSVLLMIIFSLYIIYTLLQYLENYKCKKQKQLESIYQKRNAIIPIVITIAESTIYDNKVIQSELNHLKDNLNDLRINDNDLMVVNYNISTSLDKFIICSSNTPELKENIEFMKLVLEIGEAEADIKRLK
>NZ_CP013241.1|WP_172819776.1|167597_167738_+|hypothetical-protein
MIIKNKKSKSKTKKFFKKYANKRVRQYPYQYTIQGNNYKKLLYCHL
>NZ_CP013241.1|WP_052705815.1|174027_174366_-|hypothetical-protein
MYLKSISVNIRREREGAKIMKKSIDRACYVSILPDLYINEPSDGLILIDKISKTYYELATDTPCDRSDLTCLNTDYQNGNLNILMEIKENLSFTHIVRDSHGFIFAVEIVNL
>NZ_CP013241.1|WP_072586999.1|175648_175912_-|hypothetical-protein
MYLKSISLNINREREGAKMKKKSIDRACYVNILPNDTPCDRSDLTCLNTDYQNSNLNILMEIKGNLSFTHIVRDSHGFIFAVEIADL
>NZ_CP013241.1|WP_072587000.1|176497_177259_-|type-I-B-CRISPR-associated-protein-Cas5
MEAIKFNLSGPTAFFKKPDVNSYAYFTYNNIHKIALLGILGSIIGLKGYNQQKSIDTYPEFYDKLKTLKISIVPKSKTGYFTKKFQTFTNNTGFYNIDINKRPCTLVYREQWLENVSWDIYILLDENSVDKKILNKLKDYLLNKKCHFIPYLGKNDHAADITNVELINLKSIQAHEKLIRIQSLFLTDNFNITGEKYNPNERLIILKEMLPTELDEFDNSYRFSNLSFTNLIVQPNTGKTLIYQDSLSNLYFF
>NZ_CP013241.1|WP_039698860.1|177348_178287_-|type-I-CRISPR-associated-protein-Cas7
MNKKVYGLLGVTAVRSNYNADFSSHPRTSATGEFIATDKTFKYACRKYWTLDKEKVLAFSNLNDNLNPMTLQEKYEYLFNTTIDKKTTKPIDVLSNLFSCLDVLNFGATFAISKLNFSINGAVQIQQGKNVYEYAKAEKLSLLTPYRNPKDKDDGSEKGRTTTAEQHILDRAEFIYPFSINPENYDEYVGLVPNFNGYTEDAYIKFKEAARVGVTSLNTCSKAGCENNFALFIELKDSSKAYLPNLSSYLKYDFDSINIFDLTNIFTELLEEIKEEVEKVEVYYNKYLSDIVIPNTDIKVERRNILTGKEMI
>NZ_CP013241.1|WP_072587001.1|178336_180202_-|hypothetical-protein
MVIDMMYNFKDLYDKNGDNLIVDNYPLKQGVYILVNDKGIKDFMVIKDKEAISKDKEELFKYLRHRDYLSILKQYDTNKAVSGKAKSIHSNNFLSLFIRENKSSHILEGSSLNPSLEQQVGWYFDQFKKWQEEERQAHNNNDSSNPQEFILTTLEYFDEQLFNKSKKAILNSLSNLPELLSEYTLADKDYIRIFYEMPIEYYNKEYKRYMIRKIFNKNVYHIFKDNNVYGISDIDLTTNNNKPSLLLYSMKTRVPLRLDFDTLLIAQKLFDFLYFYKVPKYNKEAKALEYVNSIYKTLYIPMDFNIDNLDLNKYTNTGQPVYYITTGNGQSFNVINYDIIYPFDSNIDFSFNDYLSLDEDVYENDKDNINDTSNVSNIRTLLDLERIVDKYFFNFNLVSNYHSDKFINNKKYTLPNNISCMLFSSKHLFHDWFRKGIDIDIIDPITNVMDNLISLWANDPDISLIKIKNMLNLRWSILDYLYEREEYAPMEVKEHFEAIHYNLKEKIHDKSLEEKYINNTEEFYYACGQLIYYLLTQNKKTLKKQQSTSKFLQCRNSSTLKIEILKLYEEVANNISAYNYRFNNLYSMVSTYNDSNDTKDYIDYLLGGLYQKSIIYEKKKQ
>NZ_CP013241.1|WP_072587002.1|180228_180960_-|CRISPR-associated-endoribonuclease-Cas6
MRTIIFFSTVIGMLSYYELLLEIKLSKDIHFSKSYEMLSKFFNRVMLTDNYLKTLHKKKEVKPYSFSGLYPVATNQIYKRNTLYKIRIRSFDPEFICAMQFSLSQIQDNNINIISIKFIKNQQQFITELVSINPVIFSIWEKQNYWQIGDNIDLLGKQLTNNLLHKHNTISCNKLTTQDTIFHCLSITNNKTIYIPYKKGLLLGNKLKIQVKEDDISQTLATVALGAGIGEKNSIGMGFCYGH
>NZ_CP013241.1|WP_096043154.1|184079_184664_+|hypothetical-protein
MMNMELINMVNKKNSLYTEDYLKLDPAIEPLVNYINNYFPTVASCSSHKNRKGKYIGNAYVLFYLSKKDMKQYFDLKQKLEYKGCLYNVVLNLYCVENGNITEKYSFIKNQQTKYLGCVLDIKPKFSFLNREKLFMAYYKECNIPFLEEKISITLERENYKNTVNPNFSVYKYIEKEPSIVKGYKEQKFSVLQH
>NZ_CP013241.1|WP_045896539.1|184739_184973_+|hypothetical-protein
MNNRDFCKHCGEKLAVRSKEDKNSNKIIFFKVCPICGYSIRADISEVSAMESFNSEKEYYNTINNIALIRNTINFKL
>NZ_CP013241.1|WP_072587004.1|185091_186036_+|SPFH/Band-7/PHB-domain-protein
MKILFIIFILFLLITTIIASIKIVNTGYVYVVERLGKYHRTLEPGWHIIIPYVDFVRQKVSTKQQILDIEPQSVITKDNVNISIDNVIFYKILDPKAAVYNIENYQAGIVYSSITNMRNIVGNMTLDEILSTGRKEINKKLLAIIDEVTDAYGIKVFSVEVKGIVPPRDILASMEKQLKAERDKRAMILQSEGEKQAAIYKAEGLKESAILNAEAEKEANIRRAEGLRESQLLEAEGKAKAISQIAKAEADAIRNVNASIIESGTNETVIALKQVEALKEMAKGPANKLILPNETLSSLGNIAAISDIIKNKDM
>NZ_CP013241.1|WP_096043155.1|186154_186343_+|hypothetical-protein
MDNNPLEEENTMGVGCENCKCNSCLRAIIHEGSLNDCHLCNVCSDKWDNSKYSSKCERYIEY

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Crispr_ID: NZ_CP013241_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013241_4

174356-175637

TypeV,TypeI-B

II-B:NA

Consensus_repeat	Method
TTTAAATACATCTAATGTAGAAGTTAAA	CRISPRCasFinder
TTTAAATACATCTAATGTA	CRT
GTTTAAATACATCTAATGTAGAAGTTAAAC	PILER-CR

20 spacers

c2c10_CAS-V-U3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NZ_CP013241_4

>merge|NZ_CP013241|4|174356-175637|CRISPRCasFinder,CRT,PILER-CR
TTTAAATACACCTAATGTAAAGGTTAGACTTAAATTTAACAAAAATAATACTAATAGTAGTACATATAAGTTTAAATACATCCAATGCAGAAGTTAAATTTGTTTTTTATATTTTCTATATCCTATATATTATTGTTTAAATACATCTAATGTAAAAGTTAAACATTATTGTAGCTTAATAAATTATTATTACTTTTTTATTTAAATACATCTAATGTAGCAGTTAAGTTTTTTCTTTAATACTTTCATTAGTACCCCTGGTTTAAATACATCTAATGTAGAAGTTAAACTTATTAGAAACTAAAAAAATCGGAGGTTTAAAAAAAGTTTAAATACACCTAATGTAAAAGTTAAACTTAAATAAAACTAAAAATTTTTATAAATCGATAGTTTAAATATATCTAATATATAAGTTAAATCCATCTTACTCTATTTTCCATATTTCAAATATGCGTGTTTAAATACATCTAATGTAAAGGTTAAACTAAGAAAAATTATAAAACATGGAGGATGATACTAGCTTAAATACATCTAATGTACAAGTTAAACTCGATTTTTTTAAAAAGCAATAACAACTTATTTTAAATACATTTAATGTAGAAGTTAAACAAAAATAAAAAGTGAAGGTTTTTAATAAAACTTTTGTTTAAATACATTTAATGTAGAAGTTAAACATTTATAAAATACCAAAGTCAGAGGTAAAATTATAGTTTAAATACATCTAATATAAAAGTTAAACTTATATTTATGCATTTGTAAAACCTCCGTTCGTTTGTTTAAATATATCCAATGCAGAAGTTAAACTAAAAACCTCCTGTGTGCCCCTTTGTTTAAATACATATAATGTAGAAATTAAACAAATAATAGTACATAGTTGTACTTTAAATACATCCAATGTAGAGGTTAAACTAGTTATTCTTTTTGTTTTTTACACACGCTATTTAAATACATTTAATGTAAAAGTTAAGCCTTATTAACAATAAGAAATTAGGAGGTTCCTTGCTAGTATAAATATATCTAATATAGAAGTTAAACTAATAAAAATTAGGACAATAAACGTTTGCGGAGTTTAGTTTAAATACATATAATATATAAGTTAAGCTATTTTCCCTTTCATTAATTAAATAAAATAGGTCATTAAATACATCCAATGTAGAAGTTAAACTAAAAAAGTAATAATAAATTATTTTAAATACATATAATGTACAAGTTAAACCACCTTATTCCATTAGCGATATTCCAAATATGTGTTGTTTAAATACATCTAATGTAAAAGTTAAAT

>NZ_CP013241|4|4|174356-175637|CRISPRCasFinder
TTTAAATACACCTAATGTAAAGGTTAGA	CTTAAATTTAACAAAAATAATACTAATAGTAGTACATATAAG
TTTAAATACATCCAATGCAGAAGTTAAA	TTTGTTTTTTATATTTTCTATATCCTATATATTATTG
TTTAAATACATCTAATGTAAAAGTTAAA	CATTATTGTAGCTTAATAAATTATTATTACTTTTTTA
TTTAAATACATCTAATGTAGCAGTTAAG	TTTTTTCTTTAATACTTTCATTAGTACCCCTGG
TTTAAATACATCTAATGTAGAAGTTAAA	CTTATTAGAAACTAAAAAAATCGGAGGTTTAAAAAAAG
TTTAAATACACCTAATGTAAAAGTTAAA	CTTAAATAAAACTAAAAATTTTTATAAATCGATAG
TTTAAATATATCTAATATATAAGTTAAA	TCCATCTTACTCTATTTTCCATATTTCAAATATGCGTG
TTTAAATACATCTAATGTAAAGGTTAAA	CTAAGAAAAATTATAAAACATGGAGGATGATACTAG
CTTAAATACATCTAATGTACAAGTTAAA	CTCGATTTTTTTAAAAAGCAATAACAACTTAT
TTTAAATACATTTAATGTAGAAGTTAAA	CAAAAATAAAAAGTGAAGGTTTTTAATAAAACTTTTG
TTTAAATACATTTAATGTAGAAGTTAAA	CATTTATAAAATACCAAAGTCAGAGGTAAAATTATAG
TTTAAATACATCTAATATAAAAGTTAAA	CTTATATTTATGCATTTGTAAAACCTCCGTTCGTTTG
TTTAAATATATCCAATGCAGAAGTTAAA	CTAAAAACCTCCTGTGTGCCCCTTTG
TTTAAATACATATAATGTAGAAATTAAA	CAAATAATAGTACATAGTTGTAC
TTTAAATACATCCAATGTAGAGGTTAAA	CTAGTTATTCTTTTTGTTTTTTACACACGCTA
TTTAAATACATTTAATGTAAAAGTTAAG	CCTTATTAACAATAAGAAATTAGGAGGTTCCTTGCTAG
TATAAATATATCTAATATAGAAGTTAAA	CTAATAAAAATTAGGACAATAAACGTTTGCGGAGTTTAG
TTTAAATACATATAATATATAAGTTAAG	CTATTTTCCCTTTCATTAATTAAATAAAATAGGTC
ATTAAATACATCCAATGTAGAAGTTAAA	CTAAAAAAGTAATAATAAATTAT
TTTAAATACATATAATGTACAAGTTAAA	CCACCTTATTCCATTAGCGATATTCCAAATATGTGTTG
TTTAAATACATCTAATGTAAAAGTTAAAT

>NZ_CP013241|4|1|174356-175627|CRT
TTTAAATACACCTAATGTA	AAGGTTAGACTTAAATTTAACAAAAATAATACTAATAGTAGTACATATAAG
TTTAAATACATCCAATGCA	GAAGTTAAATTTGTTTTTTATATTTTCTATATCCTATATATTATTG
TTTAAATACATCTAATGTA	AAAGTTAAACATTATTGTAGCTTAATAAATTATTATTACTTTTTTA
TTTAAATACATCTAATGTA	GCAGTTAAGTTTTTTCTTTAATACTTTCATTAGTACCCCTGG
TTTAAATACATCTAATGTA	GAAGTTAAACTTATTAGAAACTAAAAAAATCGGAGGTTTAAAAAAAG
TTTAAATACACCTAATGTA	AAAGTTAAACTTAAATAAAACTAAAAATTTTTATAAATCGATAG
TTTAAATATATCTAATATA	TAAGTTAAATCCATCTTACTCTATTTTCCATATTTCAAATATGCGTG
TTTAAATACATCTAATGTA	AAGGTTAAACTAAGAAAAATTATAAAACATGGAGGATGATACTAG
CTTAAATACATCTAATGTA	CAAGTTAAACTCGATTTTTTTAAAAAGCAATAACAACTTAT
TTTAAATACATTTAATGTA	GAAGTTAAACAAAAATAAAAAGTGAAGGTTTTTAATAAAACTTTTG
TTTAAATACATTTAATGTA	GAAGTTAAACATTTATAAAATACCAAAGTCAGAGGTAAAATTATAG
TTTAAATACATCTAATATA	AAAGTTAAACTTATATTTATGCATTTGTAAAACCTCCGTTCGTTTG
TTTAAATATATCCAATGCA	GAAGTTAAACTAAAAACCTCCTGTGTGCCCCTTTG
TTTAAATACATATAATGTA	GAAATTAAACAAATAATAGTACATAGTTGTAC
TTTAAATACATCCAATGTA	GAGGTTAAACTAGTTATTCTTTTTGTTTTTTACACACGCTA
TTTAAATACATTTAATGTA	AAAGTTAAGCCTTATTAACAATAAGAAATTAGGAGGTTCCTTGCTAG
TATAAATATATCTAATATA	GAAGTTAAACTAATAAAAATTAGGACAATAAACGTTTGCGGAGTTTAG
TTTAAATACATATAATATA	TAAGTTAAGCTATTTTCCCTTTCATTAATTAAATAAAATAGGTC
ATTAAATACATCCAATGTA	GAAGTTAAACTAAAAAAGTAATAATAAATTAT
TTTAAATACATATAATGTA	CAAGTTAAACCACCTTATTCCATTAGCGATATTCCAAATATGTGTTG
TTTAAATACATCTAATGTA

>NZ_CP013241|4|1|174811-175029|PILER-CR
GTTTAAATACATCTAATGTAAAGGTTAAAC	TAAGAAAAATTATAAAACATGGAGGATGATACTA
GCTTAAATACATCTAATGTACAAGTTAAAC	TCGATTTTTTTAAAAAGCAATAACAACTTA
TTTTAAATACATTTAATGTAGAAGTTAAAC	AAAAATAAAAAGTGAAGGTTTTTAATAAAACTTTT
GTTTAAATACATTTAATGTAGAAGTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013241.1\|WP_072586996.1\|171548_171782_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043154.1\|184079_184664_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_045896596.1\|168177_168363_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_039698860.1\|177348_178287_-\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP013241.1\|WP_072586997.1\|171800_172445_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_045896601.1\|170966_171413_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_CP013241.1\|WP_096043156.1\|186484_188071_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587001.1\|178336_180202_-\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NZ_CP013241.1\|WP_003362366.1\|169630_170773_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c10_CAS-V-U3	-	gnl\|CDD\|223747
NZ_CP013241.1\|WP_045897182.1\|173328_173556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_172819776.1\|167597_167738_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072586999.1\|175648_175912_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587004.1\|185091_186036_+\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP013241.1\|WP_072586994.1\|167759_168152_+\|LemA-family-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587002.1\|180228_180960_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP013241.1\|WP_045896539.1\|184739_184973_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072586995.1\|168443_169472_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP013241.1\|WP_096043155.1\|186154_186343_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587000.1\|176497_177259_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP013241.1\|WP_072586998.1\|172498_172969_-\|5'-nucleotidase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013241.1\|WP_003362366.1\|169630_170773_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.97954e-25
NZ_CP013241.1\|WP_072586995.1\|168443_169472_+\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.37024e-39
NZ_CP013241.1\|WP_072587004.1\|185091_186036_+\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	1.42742e-64
NZ_CP013241.1\|WP_039698860.1\|177348_178287_-\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	3.24462e-20
NZ_CP013241.1\|WP_045896601.1\|170966_171413_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	8.02006e-46
NZ_CP013241.1\|WP_072587000.1\|176497_177259_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	2.32864e-35
NZ_CP013241.1\|WP_072587002.1\|180228_180960_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.66639e-10

>NZ_CP013241.1|WP_045897182.1|173328_173556_+|hypothetical-protein
MSNMSYCRFQNTVEDLEECLNVLTDREELSIRENNAAKRMLKNIAEWIRAECIIDGDGEIDYEEIESIINQCKGK
>NZ_CP013241.1|WP_072586998.1|172498_172969_-|5'-nucleotidase
MKNYFKNYVNHIIFICIAVEILSLIILISRKCSIENIILLYILPFILVLFITILNNFKDNNKSNIDDKYELIDTLDLYHSKNQFIQKKEINNEIIYCFSCIDREQNISTEIIKENTENHVIVKKINHYKAYVEIYKNIYDKKNVYIIYLPKRLALT
>NZ_CP013241.1|WP_072586997.1|171800_172445_+|hypothetical-protein
MMLNINKKLMNLPDNKKEKVKKTINNNSYTKQIFNLINIMLEKELTQEQMKKFAKLNLLILKRQSKLCIEEYKMYFSIKKQFPVKFNEDNTGYENNIRSSIDLNMYISDTVKTICIVGTALSSQIDEIQEKNIISEHELCQILSLNYILWTKNKKKVERKMENPKWSDIMYIYDCETVYNRKIAIDKGFWNTSPVYTALTESKLKNDLCCSKKQ
>NZ_CP013241.1|WP_072586996.1|171548_171782_+|hypothetical-protein
MNLNKQITKHLIEMDYNNINNFKKDIISNKEIDIIKKIDIISTLNVAITVINESKGINNIDNDNLINIKDDFKFAFI
>NZ_CP013241.1|WP_045896601.1|170966_171413_+|single-stranded-DNA-binding-protein
MNKVVLIGRLTKDPELKFTPGNGTAVANFTLAVDRRFSKDGQREADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRSYEAKDGTKRYITEVIAEEVKFLEWGDKATTDSSYNNRSESSYQSGQNFANGNSFDDDIIPVDDGDIPF
>NZ_CP013241.1|WP_003362366.1|169630_170773_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MKGVDIIEITITSKIQIYPTNEQIDILNNTMFQIRKALNYISKYIFNNNCLNQKKINEDTYYYLRETYGLKSQMAQSCIKTTIAKYKTNKSNGHDFTLVHFKNLEYDIVWNRDYSIKSDIFSINSLQGRLKIPYETKGMEKYFDGSYSFGTAKLVFKFNKYFLYIPMTKDYPQTTPFEINKIVGIDLGINFLATIYDSYGKTTFYNGRHIKAKRGHYKILRKQLQQCGSKSARRKIKSIGSRENRYVNDINHTITKALVDKYGANTLFVLEDLTNVRNTTEKVNINNRYVSVSWTFYQFRQLLEYKAKMNNSIVISVNPKYTSQTCPKCGHIEKANRDKKKHIFKCKNCNYQSNDDRIGSINLWRKGLEYIEQFSKEHSE
>NZ_CP013241.1|WP_072586995.1|168443_169472_+|C40-family-peptidase
MIKNKLKIILCSAIIGGSIIGFYHPIVNAAPTEKDVTIEIQKLDNDLSNLTIKLNDNKDKNSRLVNEIKQNEKFIQNKKEEIKETENMLNAQMRDYYIENDSNSNNALVLLLSSENMSDFLNKAKIMKIVLEEGNTTIKTLEKDKQDIIKTNEKLSKDKKEIEKNTSSIKNDIKTIDDKKKELKVKLEELDKAKINNASNTNSIIAQQNHAEYNDFLKIGSVVNSKNDIGNSVVNLATKFLGVPYVWGGTTPQGFDCSGLVLYCYNAYGISLPRISQEQQQVGIDVLLSQAKAGDLVFFHGYPATHVGIYMGNGYYIHAPHTGDVVKISPLGDYTNIKRIMP
>NZ_CP013241.1|WP_045896596.1|168177_168363_-|hypothetical-protein
MEKIFKIIYLLPFDSSNSEGYSKSTTAENATDKLKLYLADKYNIDFADIAILSCTSIEIIQ
>NZ_CP013241.1|WP_072586994.1|167759_168152_+|LemA-family-protein
MYSVLLMIIFSLYIIYTLLQYLENYKCKKQKQLESIYQKRNAIIPIVITIAESTIYDNKVIQSELNHLKDNLNDLRINDNDLMVVNYNISTSLDKFIICSSNTPELKENIEFMKLVLEIGEAEADIKRLK
>NZ_CP013241.1|WP_172819776.1|167597_167738_+|hypothetical-protein
MIIKNKKSKSKTKKFFKKYANKRVRQYPYQYTIQGNNYKKLLYCHL
>NZ_CP013241.1|WP_072586999.1|175648_175912_-|hypothetical-protein
MYLKSISLNINREREGAKMKKKSIDRACYVNILPNDTPCDRSDLTCLNTDYQNSNLNILMEIKGNLSFTHIVRDSHGFIFAVEIADL
>NZ_CP013241.1|WP_072587000.1|176497_177259_-|type-I-B-CRISPR-associated-protein-Cas5
MEAIKFNLSGPTAFFKKPDVNSYAYFTYNNIHKIALLGILGSIIGLKGYNQQKSIDTYPEFYDKLKTLKISIVPKSKTGYFTKKFQTFTNNTGFYNIDINKRPCTLVYREQWLENVSWDIYILLDENSVDKKILNKLKDYLLNKKCHFIPYLGKNDHAADITNVELINLKSIQAHEKLIRIQSLFLTDNFNITGEKYNPNERLIILKEMLPTELDEFDNSYRFSNLSFTNLIVQPNTGKTLIYQDSLSNLYFF
>NZ_CP013241.1|WP_039698860.1|177348_178287_-|type-I-CRISPR-associated-protein-Cas7
MNKKVYGLLGVTAVRSNYNADFSSHPRTSATGEFIATDKTFKYACRKYWTLDKEKVLAFSNLNDNLNPMTLQEKYEYLFNTTIDKKTTKPIDVLSNLFSCLDVLNFGATFAISKLNFSINGAVQIQQGKNVYEYAKAEKLSLLTPYRNPKDKDDGSEKGRTTTAEQHILDRAEFIYPFSINPENYDEYVGLVPNFNGYTEDAYIKFKEAARVGVTSLNTCSKAGCENNFALFIELKDSSKAYLPNLSSYLKYDFDSINIFDLTNIFTELLEEIKEEVEKVEVYYNKYLSDIVIPNTDIKVERRNILTGKEMI
>NZ_CP013241.1|WP_072587001.1|178336_180202_-|hypothetical-protein
MVIDMMYNFKDLYDKNGDNLIVDNYPLKQGVYILVNDKGIKDFMVIKDKEAISKDKEELFKYLRHRDYLSILKQYDTNKAVSGKAKSIHSNNFLSLFIRENKSSHILEGSSLNPSLEQQVGWYFDQFKKWQEEERQAHNNNDSSNPQEFILTTLEYFDEQLFNKSKKAILNSLSNLPELLSEYTLADKDYIRIFYEMPIEYYNKEYKRYMIRKIFNKNVYHIFKDNNVYGISDIDLTTNNNKPSLLLYSMKTRVPLRLDFDTLLIAQKLFDFLYFYKVPKYNKEAKALEYVNSIYKTLYIPMDFNIDNLDLNKYTNTGQPVYYITTGNGQSFNVINYDIIYPFDSNIDFSFNDYLSLDEDVYENDKDNINDTSNVSNIRTLLDLERIVDKYFFNFNLVSNYHSDKFINNKKYTLPNNISCMLFSSKHLFHDWFRKGIDIDIIDPITNVMDNLISLWANDPDISLIKIKNMLNLRWSILDYLYEREEYAPMEVKEHFEAIHYNLKEKIHDKSLEEKYINNTEEFYYACGQLIYYLLTQNKKTLKKQQSTSKFLQCRNSSTLKIEILKLYEEVANNISAYNYRFNNLYSMVSTYNDSNDTKDYIDYLLGGLYQKSIIYEKKKQ
>NZ_CP013241.1|WP_072587002.1|180228_180960_-|CRISPR-associated-endoribonuclease-Cas6
MRTIIFFSTVIGMLSYYELLLEIKLSKDIHFSKSYEMLSKFFNRVMLTDNYLKTLHKKKEVKPYSFSGLYPVATNQIYKRNTLYKIRIRSFDPEFICAMQFSLSQIQDNNINIISIKFIKNQQQFITELVSINPVIFSIWEKQNYWQIGDNIDLLGKQLTNNLLHKHNTISCNKLTTQDTIFHCLSITNNKTIYIPYKKGLLLGNKLKIQVKEDDISQTLATVALGAGIGEKNSIGMGFCYGH
>NZ_CP013241.1|WP_096043154.1|184079_184664_+|hypothetical-protein
MMNMELINMVNKKNSLYTEDYLKLDPAIEPLVNYINNYFPTVASCSSHKNRKGKYIGNAYVLFYLSKKDMKQYFDLKQKLEYKGCLYNVVLNLYCVENGNITEKYSFIKNQQTKYLGCVLDIKPKFSFLNREKLFMAYYKECNIPFLEEKISITLERENYKNTVNPNFSVYKYIEKEPSIVKGYKEQKFSVLQH
>NZ_CP013241.1|WP_045896539.1|184739_184973_+|hypothetical-protein
MNNRDFCKHCGEKLAVRSKEDKNSNKIIFFKVCPICGYSIRADISEVSAMESFNSEKEYYNTINNIALIRNTINFKL
>NZ_CP013241.1|WP_072587004.1|185091_186036_+|SPFH/Band-7/PHB-domain-protein
MKILFIIFILFLLITTIIASIKIVNTGYVYVVERLGKYHRTLEPGWHIIIPYVDFVRQKVSTKQQILDIEPQSVITKDNVNISIDNVIFYKILDPKAAVYNIENYQAGIVYSSITNMRNIVGNMTLDEILSTGRKEINKKLLAIIDEVTDAYGIKVFSVEVKGIVPPRDILASMEKQLKAERDKRAMILQSEGEKQAAIYKAEGLKESAILNAEAEKEANIRRAEGLRESQLLEAEGKAKAISQIAKAEADAIRNVNASIIESGTNETVIALKQVEALKEMAKGPANKLILPNETLSSLGNIAAISDIIKNKDM
>NZ_CP013241.1|WP_096043155.1|186154_186343_+|hypothetical-protein
MDNNPLEEENTMGVGCENCKCNSCLRAIIHEGSLNDCHLCNVCSDKWDNSKYSSKCERYIEY
>NZ_CP013241.1|WP_096043156.1|186484_188071_+|hypothetical-protein
MVNNKITSLLKERKERNISNCLSYDKKVKLDISLDNTEFFIKAVKEISKKYFFAKTVETNNQKLIEEIDKEFQFFKIDIEEITDKNQLDIIGRVQLRYTSGTKTPNNIIEYASGLVPIKCTISDKFNSSFSFYSVLRGRIGDKTSKYLFKCNDKKIKILDFFTAISEVYIINEVINYNKSNKEIVIDVINSLNNRVKYDRSFITYLNEYFITGEEITISNLCLLKTSYSITKAGSAYMSTFAKEILGSIFKEIVIDNKDIIIQEKQIADMNSDYAGAFQKKKNISNKTLKAMEKSTFNIYFKNVEFDNDVDLVKIKQVEDEFQDTLEFLNLNESMLKFMKEVSLRFRYLGKHKAVGLYFPLQKCLCVDLRDPSAFLHEFMHMVDYQCYKFDSLKLSSKYNFRKIKNKYIEILDKTIYNLPSDDSFKKIYYGKTKYNKDYYTNSAEVFARCGEIYLNNILKVDNSLIKSLDKINIVYPLDEQLILLIKEYYSSLFDIRDKIEKVSAKAKNINNRVEFIISEEGQLKLNF

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Crispr_ID: NZ_CP013241_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013241_5

175902-176243

TypeV,TypeI-B

II-B

Consensus_repeat	Method
TTTAAATACATCTAATGTAGAAGTTAAA	CRISPRCasFinder
AGATAAGTTTAACTTCTACATTAGATGTATTTAAAGAA	PILER-CR

5 spacers

c2c10_CAS-V-U3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NZ_CP013241_5

>merge|NZ_CP013241|5|175902-176243|CRISPRCasFinder,PILER-CR
TTTAAATACATCTAATGCAGAAGTTAAACATATGTATATTTACAAATGAGAGAACAAATTAATTGTTTAAATACATCTAATGTAGAAGTTAAACGTATCTTATTTTTAGGTAAAACCTCTCTTAAATTCTTGTTTAAATACATCTAATATAGAAGTTAAACTTTTCTATTCTGCAACTCTCTTATAAAAAAAGAACTCTTTAAATACATCCAATGTAGAAGTTAAACAAATAATAGTACATAGTTGTACTTTAAATACATCTAATGTAGAAGTTAAACTTATTTTTTCTTCATTAAACAACCTCCTCATTAAGGTTTAAATACATATAATGTAAAAGTTAAA

>NZ_CP013241|5|5|175902-176243|CRISPRCasFinder
TTTAAATACATCTAATGCAGAAGTTAAA	CATATGTATATTTACAAATGAGAGAACAAATTAATTG
TTTAAATACATCTAATGTAGAAGTTAAA	CGTATCTTATTTTTAGGTAAAACCTCTCTTAAATTCTTG
TTTAAATACATCTAATATAGAAGTTAAA	CTTTTCTATTCTGCAACTCTCTTATAAAAAAAGAACTC
TTTAAATACATCCAATGTAGAAGTTAAA	CAAATAATAGTACATAGTTGTAC
TTTAAATACATCTAATGTAGAAGTTAAA	CTTATTTTTTCTTCATTAAACAACCTCCTCATTAAGG
TTTAAATACATATAATGTAAAAGTTAAA

>NZ_CP013241|5|2|175964-176185|PILER-CR
TTGTTTAAATACATCTAATGTAGAAGTTAAACGTATCT	TATTTTTAGGTAAAACCTCTCTTAAATTC
TTGTTTAAATACATCTAATATAGAAGTTAAACTTTTCT	ATTCTGCAACTCTCTTATAAAAAAAGAA
CTCTTTAAATACATCCAATGTAGAAGTTAAACAAATAA	TAGTACATAGTTGTACTTT
AAATACATCTAATGTAGAAGTTAAACTTATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013241.1\|WP_072586996.1\|171548_171782_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_045896596.1\|168177_168363_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_039698860.1\|177348_178287_-\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP013241.1\|WP_072586997.1\|171800_172445_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_045896601.1\|170966_171413_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_CP013241.1\|WP_096043157.1\|188362_188698_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180526
NZ_CP013241.1\|WP_072587001.1\|178336_180202_-\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NZ_CP013241.1\|WP_003362366.1\|169630_170773_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c10_CAS-V-U3	-	gnl\|CDD\|223747
NZ_CP013241.1\|WP_045897182.1\|173328_173556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043156.1\|186484_188071_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043154.1\|184079_184664_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587004.1\|185091_186036_+\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP013241.1\|WP_072586994.1\|167759_168152_+\|LemA-family-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587002.1\|180228_180960_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP013241.1\|WP_045896539.1\|184739_184973_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_052705815.1\|174027_174366_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072586995.1\|168443_169472_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP013241.1\|WP_096043155.1\|186154_186343_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587000.1\|176497_177259_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP013241.1\|WP_072586998.1\|172498_172969_-\|5'-nucleotidase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013241.1\|WP_003362366.1\|169630_170773_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.97954e-25
NZ_CP013241.1\|WP_096043157.1\|188362_188698_+\|hypothetical-protein	gnl\|CDD\|180526	PRK06315, PRK06315, type III secretion system ATPase; Provisional.	0.003268
NZ_CP013241.1\|WP_072586995.1\|168443_169472_+\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.37024e-39
NZ_CP013241.1\|WP_072587004.1\|185091_186036_+\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	1.42742e-64
NZ_CP013241.1\|WP_039698860.1\|177348_178287_-\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	3.24462e-20
NZ_CP013241.1\|WP_045896601.1\|170966_171413_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	8.02006e-46
NZ_CP013241.1\|WP_072587000.1\|176497_177259_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	2.32864e-35
NZ_CP013241.1\|WP_072587002.1\|180228_180960_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	1.66639e-10

>NZ_CP013241.1|WP_052705815.1|174027_174366_-|hypothetical-protein
MYLKSISVNIRREREGAKIMKKSIDRACYVSILPDLYINEPSDGLILIDKISKTYYELATDTPCDRSDLTCLNTDYQNGNLNILMEIKENLSFTHIVRDSHGFIFAVEIVNL
>NZ_CP013241.1|WP_045897182.1|173328_173556_+|hypothetical-protein
MSNMSYCRFQNTVEDLEECLNVLTDREELSIRENNAAKRMLKNIAEWIRAECIIDGDGEIDYEEIESIINQCKGK
>NZ_CP013241.1|WP_072586998.1|172498_172969_-|5'-nucleotidase
MKNYFKNYVNHIIFICIAVEILSLIILISRKCSIENIILLYILPFILVLFITILNNFKDNNKSNIDDKYELIDTLDLYHSKNQFIQKKEINNEIIYCFSCIDREQNISTEIIKENTENHVIVKKINHYKAYVEIYKNIYDKKNVYIIYLPKRLALT
>NZ_CP013241.1|WP_072586997.1|171800_172445_+|hypothetical-protein
MMLNINKKLMNLPDNKKEKVKKTINNNSYTKQIFNLINIMLEKELTQEQMKKFAKLNLLILKRQSKLCIEEYKMYFSIKKQFPVKFNEDNTGYENNIRSSIDLNMYISDTVKTICIVGTALSSQIDEIQEKNIISEHELCQILSLNYILWTKNKKKVERKMENPKWSDIMYIYDCETVYNRKIAIDKGFWNTSPVYTALTESKLKNDLCCSKKQ
>NZ_CP013241.1|WP_072586996.1|171548_171782_+|hypothetical-protein
MNLNKQITKHLIEMDYNNINNFKKDIISNKEIDIIKKIDIISTLNVAITVINESKGINNIDNDNLINIKDDFKFAFI
>NZ_CP013241.1|WP_045896601.1|170966_171413_+|single-stranded-DNA-binding-protein
MNKVVLIGRLTKDPELKFTPGNGTAVANFTLAVDRRFSKDGQREADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRSYEAKDGTKRYITEVIAEEVKFLEWGDKATTDSSYNNRSESSYQSGQNFANGNSFDDDIIPVDDGDIPF
>NZ_CP013241.1|WP_003362366.1|169630_170773_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MKGVDIIEITITSKIQIYPTNEQIDILNNTMFQIRKALNYISKYIFNNNCLNQKKINEDTYYYLRETYGLKSQMAQSCIKTTIAKYKTNKSNGHDFTLVHFKNLEYDIVWNRDYSIKSDIFSINSLQGRLKIPYETKGMEKYFDGSYSFGTAKLVFKFNKYFLYIPMTKDYPQTTPFEINKIVGIDLGINFLATIYDSYGKTTFYNGRHIKAKRGHYKILRKQLQQCGSKSARRKIKSIGSRENRYVNDINHTITKALVDKYGANTLFVLEDLTNVRNTTEKVNINNRYVSVSWTFYQFRQLLEYKAKMNNSIVISVNPKYTSQTCPKCGHIEKANRDKKKHIFKCKNCNYQSNDDRIGSINLWRKGLEYIEQFSKEHSE
>NZ_CP013241.1|WP_072586995.1|168443_169472_+|C40-family-peptidase
MIKNKLKIILCSAIIGGSIIGFYHPIVNAAPTEKDVTIEIQKLDNDLSNLTIKLNDNKDKNSRLVNEIKQNEKFIQNKKEEIKETENMLNAQMRDYYIENDSNSNNALVLLLSSENMSDFLNKAKIMKIVLEEGNTTIKTLEKDKQDIIKTNEKLSKDKKEIEKNTSSIKNDIKTIDDKKKELKVKLEELDKAKINNASNTNSIIAQQNHAEYNDFLKIGSVVNSKNDIGNSVVNLATKFLGVPYVWGGTTPQGFDCSGLVLYCYNAYGISLPRISQEQQQVGIDVLLSQAKAGDLVFFHGYPATHVGIYMGNGYYIHAPHTGDVVKISPLGDYTNIKRIMP
>NZ_CP013241.1|WP_045896596.1|168177_168363_-|hypothetical-protein
MEKIFKIIYLLPFDSSNSEGYSKSTTAENATDKLKLYLADKYNIDFADIAILSCTSIEIIQ
>NZ_CP013241.1|WP_072586994.1|167759_168152_+|LemA-family-protein
MYSVLLMIIFSLYIIYTLLQYLENYKCKKQKQLESIYQKRNAIIPIVITIAESTIYDNKVIQSELNHLKDNLNDLRINDNDLMVVNYNISTSLDKFIICSSNTPELKENIEFMKLVLEIGEAEADIKRLK
>NZ_CP013241.1|WP_072587000.1|176497_177259_-|type-I-B-CRISPR-associated-protein-Cas5
MEAIKFNLSGPTAFFKKPDVNSYAYFTYNNIHKIALLGILGSIIGLKGYNQQKSIDTYPEFYDKLKTLKISIVPKSKTGYFTKKFQTFTNNTGFYNIDINKRPCTLVYREQWLENVSWDIYILLDENSVDKKILNKLKDYLLNKKCHFIPYLGKNDHAADITNVELINLKSIQAHEKLIRIQSLFLTDNFNITGEKYNPNERLIILKEMLPTELDEFDNSYRFSNLSFTNLIVQPNTGKTLIYQDSLSNLYFF
>NZ_CP013241.1|WP_039698860.1|177348_178287_-|type-I-CRISPR-associated-protein-Cas7
MNKKVYGLLGVTAVRSNYNADFSSHPRTSATGEFIATDKTFKYACRKYWTLDKEKVLAFSNLNDNLNPMTLQEKYEYLFNTTIDKKTTKPIDVLSNLFSCLDVLNFGATFAISKLNFSINGAVQIQQGKNVYEYAKAEKLSLLTPYRNPKDKDDGSEKGRTTTAEQHILDRAEFIYPFSINPENYDEYVGLVPNFNGYTEDAYIKFKEAARVGVTSLNTCSKAGCENNFALFIELKDSSKAYLPNLSSYLKYDFDSINIFDLTNIFTELLEEIKEEVEKVEVYYNKYLSDIVIPNTDIKVERRNILTGKEMI
>NZ_CP013241.1|WP_072587001.1|178336_180202_-|hypothetical-protein
MVIDMMYNFKDLYDKNGDNLIVDNYPLKQGVYILVNDKGIKDFMVIKDKEAISKDKEELFKYLRHRDYLSILKQYDTNKAVSGKAKSIHSNNFLSLFIRENKSSHILEGSSLNPSLEQQVGWYFDQFKKWQEEERQAHNNNDSSNPQEFILTTLEYFDEQLFNKSKKAILNSLSNLPELLSEYTLADKDYIRIFYEMPIEYYNKEYKRYMIRKIFNKNVYHIFKDNNVYGISDIDLTTNNNKPSLLLYSMKTRVPLRLDFDTLLIAQKLFDFLYFYKVPKYNKEAKALEYVNSIYKTLYIPMDFNIDNLDLNKYTNTGQPVYYITTGNGQSFNVINYDIIYPFDSNIDFSFNDYLSLDEDVYENDKDNINDTSNVSNIRTLLDLERIVDKYFFNFNLVSNYHSDKFINNKKYTLPNNISCMLFSSKHLFHDWFRKGIDIDIIDPITNVMDNLISLWANDPDISLIKIKNMLNLRWSILDYLYEREEYAPMEVKEHFEAIHYNLKEKIHDKSLEEKYINNTEEFYYACGQLIYYLLTQNKKTLKKQQSTSKFLQCRNSSTLKIEILKLYEEVANNISAYNYRFNNLYSMVSTYNDSNDTKDYIDYLLGGLYQKSIIYEKKKQ
>NZ_CP013241.1|WP_072587002.1|180228_180960_-|CRISPR-associated-endoribonuclease-Cas6
MRTIIFFSTVIGMLSYYELLLEIKLSKDIHFSKSYEMLSKFFNRVMLTDNYLKTLHKKKEVKPYSFSGLYPVATNQIYKRNTLYKIRIRSFDPEFICAMQFSLSQIQDNNINIISIKFIKNQQQFITELVSINPVIFSIWEKQNYWQIGDNIDLLGKQLTNNLLHKHNTISCNKLTTQDTIFHCLSITNNKTIYIPYKKGLLLGNKLKIQVKEDDISQTLATVALGAGIGEKNSIGMGFCYGH
>NZ_CP013241.1|WP_096043154.1|184079_184664_+|hypothetical-protein
MMNMELINMVNKKNSLYTEDYLKLDPAIEPLVNYINNYFPTVASCSSHKNRKGKYIGNAYVLFYLSKKDMKQYFDLKQKLEYKGCLYNVVLNLYCVENGNITEKYSFIKNQQTKYLGCVLDIKPKFSFLNREKLFMAYYKECNIPFLEEKISITLERENYKNTVNPNFSVYKYIEKEPSIVKGYKEQKFSVLQH
>NZ_CP013241.1|WP_045896539.1|184739_184973_+|hypothetical-protein
MNNRDFCKHCGEKLAVRSKEDKNSNKIIFFKVCPICGYSIRADISEVSAMESFNSEKEYYNTINNIALIRNTINFKL
>NZ_CP013241.1|WP_072587004.1|185091_186036_+|SPFH/Band-7/PHB-domain-protein
MKILFIIFILFLLITTIIASIKIVNTGYVYVVERLGKYHRTLEPGWHIIIPYVDFVRQKVSTKQQILDIEPQSVITKDNVNISIDNVIFYKILDPKAAVYNIENYQAGIVYSSITNMRNIVGNMTLDEILSTGRKEINKKLLAIIDEVTDAYGIKVFSVEVKGIVPPRDILASMEKQLKAERDKRAMILQSEGEKQAAIYKAEGLKESAILNAEAEKEANIRRAEGLRESQLLEAEGKAKAISQIAKAEADAIRNVNASIIESGTNETVIALKQVEALKEMAKGPANKLILPNETLSSLGNIAAISDIIKNKDM
>NZ_CP013241.1|WP_096043155.1|186154_186343_+|hypothetical-protein
MDNNPLEEENTMGVGCENCKCNSCLRAIIHEGSLNDCHLCNVCSDKWDNSKYSSKCERYIEY
>NZ_CP013241.1|WP_096043156.1|186484_188071_+|hypothetical-protein
MVNNKITSLLKERKERNISNCLSYDKKVKLDISLDNTEFFIKAVKEISKKYFFAKTVETNNQKLIEEIDKEFQFFKIDIEEITDKNQLDIIGRVQLRYTSGTKTPNNIIEYASGLVPIKCTISDKFNSSFSFYSVLRGRIGDKTSKYLFKCNDKKIKILDFFTAISEVYIINEVINYNKSNKEIVIDVINSLNNRVKYDRSFITYLNEYFITGEEITISNLCLLKTSYSITKAGSAYMSTFAKEILGSIFKEIVIDNKDIIIQEKQIADMNSDYAGAFQKKKNISNKTLKAMEKSTFNIYFKNVEFDNDVDLVKIKQVEDEFQDTLEFLNLNESMLKFMKEVSLRFRYLGKHKAVGLYFPLQKCLCVDLRDPSAFLHEFMHMVDYQCYKFDSLKLSSKYNFRKIKNKYIEILDKTIYNLPSDDSFKKIYYGKTKYNKDYYTNSAEVFARCGEIYLNNILKVDNSLIKSLDKINIVYPLDEQLILLIKEYYSSLFDIRDKIEKVSAKAKNINNRVEFIISEEGQLKLNF
>NZ_CP013241.1|WP_096043157.1|188362_188698_+|hypothetical-protein
MVELIGSEKQIKWAKDIKKELIKEVEEYKERFNNAGNFQINYLNRYKKEIFKRATSRKTTMDEAIKILNSIIDEVKTNIENETSAKRLIEVKKSFAMADATTDRYLIKEFI

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Crispr_ID: NZ_CP013241_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013241_6

233221-233516

TypeV

NA:I-A

Consensus_repeat	Method
ATTTACATTCCATATAGTTAAGATAAACC	PILER-CR
TTTATCTTAACTATATGGAATGTAAAT	CRISPRCasFinder
TTTATCTTAACTATATNGAATGTAAAT	CRT

4 spacers

c2c10_CAS-V-U3,RT

The CRISPR arrays of NZ_CP013241_6

>merge|NZ_CP013241|6|233221-233516|PILER-CR,CRISPRCasFinder,CRT
GGTTTATCTTAACTATATGGAATGTAAATGGACCTGCAGAATTAAAAATAGATATAGATAGCTTTGGGTTTATCTTAACTATATGGAATGTAAATACTTTATCATTTACCATATTAACTACATGAATATAATGTTTTATCTTAACTATATGGAATGTAAATCAAGTGGAAGTCCTTTCAATATTTTTTTTAGTTGTTAAGTTTTATCTTAACTATATAGAATGTAAATTCACCCAATAATTTAGCTTCAAGGAGCTAAGACTTTCTAATTTTATCTTAAATGATAATATTATGGAA

>NZ_CP013241|6|3|233221-233448|PILER-CR
GGTTTATCTTAACTATATGGAATGTAAAT	GGACCTGCAGAATTAAAAATAGATATAGATAGCTTTG
GGTTTATCTTAACTATATGGAATGTAAAT	ACTTTATCATTTACCATATTAACTACATGAATATAAT
GTTTTATCTTAACTATATGGAATGTAAAT	CAAGTGGAAGTCCTTTCAATATTTTTTTTAGTTGTTAA
GTTTTATCTTAACTATATAGAATGTAAAT

>NZ_CP013241|6|6|233223-233448|CRISPRCasFinder
TTTATCTTAACTATATGGAATGTAAAT	GGACCTGCAGAATTAAAAATAGATATAGATAGCTTTGGG
TTTATCTTAACTATATGGAATGTAAAT	ACTTTATCATTTACCATATTAACTACATGAATATAATGT
TTTATCTTAACTATATGGAATGTAAAT	CAAGTGGAAGTCCTTTCAATATTTTTTTTAGTTGTTAAGT
TTTATCTTAACTATATAGAATGTAAAT

>NZ_CP013241|6|2|233223-233516|CRT
TTTATCTTAACTATATGGAATGTAAAT	GGACCTGCAGAATTAAAAATAGATATAGATAGCTTTGGG
TTTATCTTAACTATATGGAATGTAAAT	ACTTTATCATTTACCATATTAACTACATGAATATAATGT
TTTATCTTAACTATATGGAATGTAAAT	CAAGTGGAAGTCCTTTCAATATTTTTTTTAGTTGTTAAGT
TTTATCTTAACTATATAGAATGTAAAT	TCACCCAATAATTTAGCTTCAAGGAGCTAAGACTTTCTAAT
TTTATCTTAAATGATAATATTATGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013241.1\|WP_096043179.1\|228273_228660_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043177.1\|223766_224168_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043182.1\|230380_230599_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_072587031.1\|234288_234990_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_003405269.1\|225790_227614_+\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP013241.1\|WP_032072353.1\|231051_231249_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043178.1\|227748_227931_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_157672527.1\|233644_233788_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_030032327.1\|235008_235446_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043180.1\|228723_229038_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043183.1\|231441_232890_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c10_CAS-V-U3	-	gnl\|CDD\|284650
NZ_CP013241.1\|WP_040108672.1\|227961_228207_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013241.1\|WP_096043181.1\|230103_230322_+\|hypothetical-protein	unknown	unknown	unknown

>NZ_CP013241.1|WP_096043183.1|231441_232890_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MNTVRKIKLTILGDTETRNKQYKWIRDEQYNQYRALNLSMTYMVTNLMLKNNESGLENRKEKDILKIENKIKKDEENLKKELAKKKINEEKIENIKSNIEELKSEKEKLENELKNIKEYRSNIDEEFKKMYVDDLYNVLNKISFQHEDMKSLVTQRVKKDFNNDIKEIMRGDRSVRNYKRNFPVLTRGRDLKFKYFEKSEDIEIKWIEGIKFKCILGRPSKSLELKHTLHKVINEEYKICDSSLQFDKNNNLILNLTLDIPENNKYEKIENRIVGVDLGLKIPAYVALNDTRYIRKSIGSINDFLKVRTQIQSRARKLQKSLQVVRGGKGRNKKMKALERFREKERNFARNYNHFLSYNIVKFALDNKAEQINLELLEMKKTQNKSILRNWSYYQLQTFIEYKAERVGIKVKYIDPYHTSQTCSECGNYEEGQRVEQDTFVCKRCGHKINADYNAARNIAMSDNYISKKEESEYYKNNKNMV
>NZ_CP013241.1|WP_032072353.1|231051_231249_+|hypothetical-protein
MILKKLMSEDYNATRVVKLRDRSKIAKRLRRYARKKLEHELNKNKLVNLKVNLSCCVSCMDIAFL
>NZ_CP013241.1|WP_096043182.1|230380_230599_+|hypothetical-protein
MLSELLIQFKDYDIGVQYFNIEFAMEMREDVGWCGIATINGETILASGYETPIKAVLKCIKILKEKRGDLKT
>NZ_CP013241.1|WP_096043181.1|230103_230322_+|hypothetical-protein
MNDEGYRCWNCGIKKDKNSKYYQVRIVAHDGKLLFVPCCCQKCAEKVKNENVELHKERYYTTKNQSIQIGVW
>NZ_CP013241.1|WP_096043180.1|228723_229038_+|hypothetical-protein
MKKEIEKMNELKNIIIENPNLPIRFFIGEDGNCGECNYEENSINDVVVDSLTLYEGRYYNEEDFGEELYAYLYNEFESEEKLNKHIDEIIKSKDFKKAICVFIG
>NZ_CP013241.1|WP_096043179.1|228273_228660_+|hypothetical-protein
MKEKLTKIWRLCETKQLSEIFEEYMKSIGIRKHDGRRKNNNNTYMIDGHCTGWNRVQCYYHKDSFKYSEENLLIVLRKRAGNYFIIERKGIRAFEVDYSGIRHYEENLLNEIMKEHKPLFDSLMRLAD
>NZ_CP013241.1|WP_040108672.1|227961_228207_+|hypothetical-protein
MFNNRFCYRIAKEAEVGWDEELKDYCEAYIETTMQTKKEIPEELKSDIAENLKIGLAGTLDTNRKYLEYIEPDEYDQYVED
>NZ_CP013241.1|WP_096043178.1|227748_227931_+|hypothetical-protein
MKIQLSCVRCGSTEFNHEPIQCIKVEGNYYLLHEDIKDNEVTCVKCGLRDYVANLVIVFK
>NZ_CP013241.1|WP_003405269.1|225790_227614_+|group-II-intron-reverse-transcriptase/maturase
MKTINKLNKSATSPHITEWYTLNWKKINRYVKRLRQRIFRAEQLGQRRKVKKLQRLMLRSKANLLISIKRVTQINKGKRTAGIDGFKATTEWEKIGLFNLFKSYNIKYIKPKPAKRTYIPKKNGKLRPLGIPIIKDRIYQNIVKNALEPQWESKFESIAYGFRPKRSTHDAIEQLYLKLRKGSKRQWIFEGDFKGCFDNLNHEYIMECLNNFPAKETIYKWLKAGYIDNNVFKNTNEGTPQGGIISPLLANIALHGIEEELGVKYRLNKRQGYYLKDDSIGIVKYADDFVILCKTKEEAETMYEKLSPYLKKRGLELAEDKTRITHISMGFDFLGFNIRQYKKNKGMTLLIKPSKASIKKVKKSIKEVFEEHRGNPIGAIIGKLNPIIRGTGNYWSCVISKDIYSSIDYYVWLKTRKYLKTLHPNKSWKWRIKRYFKPDFTGVSKDKWILTDPNNNKNQLMKMNWIPIVRHVLIKYKNSPDDPSLKDYFKVRDEKEFNRHNILSRRKLAKKSKYKCRICNQSLVSDESLEVNHIVPTLIGGKDVYDNLELLHTSCHIQHHKLLNKYGEGRDLPKIKKFFAERNVDPSSKEGIRLMKKQLKKFKYTNC
>NZ_CP013241.1|WP_096043177.1|223766_224168_+|hypothetical-protein
MKVNKKSFKTINGLELVVINRRSAVIFEIGESHKEDKYDFLLKFSSEVFKNLLEHIEAISNKSWTNITPKECDSLGADYSEYYDRQFDNNGYMSISENTLSVERPCLESNKLYQFTKRKMESFIHDFRKAVLL
>NZ_CP013241.1|WP_157672527.1|233644_233788_-|hypothetical-protein
MLTNKDIIKMFLFVFRVLYIIFRDAKSILKILSTAATAYSIVILLLQ
>NZ_CP013241.1|WP_072587031.1|234288_234990_+|hypothetical-protein
MLELQGTEKETAYASCIREYVLYQLENLNVPELEGKKQKFISAITRQKKAKVIIKSFVSSFRLENVKVIALDFLTYENKFTQKEILSFSERAVTIDETLKDDKCEIKKYEIEESKQKNNEEVKNEFISASEKQIKYLKDLMENTDNMKLEFNGVNLEYYKELIKSCKENKLSRRDASKMIDTLLECQKFKCKNGDVKFFECRYDTRDCETGEHIEAGELVWKDSEGIHRADNY
>NZ_CP013241.1|WP_030032327.1|235008_235446_+|hypothetical-protein
MLIEQAYNAGKKIRKAILEKGGDINTIVHKLQNVKHNMHDLSYEYLKICLDYNITNDNKFMVQMLADDIDEITSNNVAISLCMGIMSEDEYISFTEASKRWGKDRTTIQKAKDSGRFSQNDWKKEGRNLYIKVSAMERIYGKEKR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NZ_CP013242.1	938329-938347	2	0.895

1. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to position: 938329-938347, mismatch: 2, identity: 0.895

aaataatagtacatagttg	CRISPR spacer
aaatattagtagatagttg	Protospacer
***** ***** *******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154461-154483	0	1.0
NZ_CP013241_4	4.1\|174384\|42\|NZ_CP013241\|CRISPRCasFinder	174384-174425	42	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	132416-132457	0	1.0
NZ_CP013241_4	4.11\|175029\|37\|NZ_CP013241\|CRISPRCasFinder	175029-175065	37	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148706-148742	0	1.0
NZ_CP013241_4	4.12\|175094\|37\|NZ_CP013241\|CRISPRCasFinder	175094-175130	37	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153455-153491	0	1.0
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208051-208073	0	1.0
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148585-148607	0	1.0
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131702-131724	0	1.0
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131555-131577	0	1.0
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71312-71334	0	1.0
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44076-44098	0	1.0
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44938-44960	0	1.0
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29070-29092	0	1.0
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131387-131418	0	1.0
NZ_CP013241_4	4.16\|175324\|38\|NZ_CP013241\|CRISPRCasFinder	175324-175361	38	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131321-131358	0	1.0
NZ_CP013241_4	4.17\|175390\|39\|NZ_CP013241\|CRISPRCasFinder	175390-175428	39	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131254-131292	0	1.0
NZ_CP013241_4	4.18\|175457\|35\|NZ_CP013241\|CRISPRCasFinder	175457-175491	35	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131191-131225	0	1.0
NZ_CP013241_4	4.20\|175571\|38\|NZ_CP013241\|CRISPRCasFinder	175571-175608	38	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131074-131111	0	1.0
NZ_CP013241_4	4.31\|175020\|46\|NZ_CP013241\|CRT	175020-175065	46	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148706-148751	0	1.0
NZ_CP013241_4	4.32\|175085\|46\|NZ_CP013241\|CRT	175085-175130	46	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153446-153491	0	1.0
NZ_CP013241_4	4.35\|175255\|41\|NZ_CP013241\|CRT	175255-175295	41	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131387-131427	0	1.0
NZ_CP013241_4	4.36\|175315\|47\|NZ_CP013241\|CRT	175315-175361	47	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131321-131367	0	1.0
NZ_CP013241_4	4.37\|175381\|48\|NZ_CP013241\|CRT	175381-175428	48	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131254-131301	0	1.0
NZ_CP013241_4	4.38\|175448\|44\|NZ_CP013241\|CRT	175448-175491	44	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131191-131234	0	1.0
NZ_CP013241_4	4.40\|175562\|47\|NZ_CP013241\|CRT	175562-175608	47	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131074-131120	0	1.0
NZ_CP013241_5	5.1\|175930\|37\|NZ_CP013241\|CRISPRCasFinder	175930-175966	37	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44808-44844	0	1.0
NZ_CP013241_5	5.1\|175930\|37\|NZ_CP013241\|CRISPRCasFinder	175930-175966	37	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130641-130677	0	1.0
NZ_CP013241_5	5.2\|175995\|39\|NZ_CP013241\|CRISPRCasFinder	175995-176033	39	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155411-155449	0	1.0
NZ_CP013241_5	5.2\|175995\|39\|NZ_CP013241\|CRISPRCasFinder	175995-176033	39	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130317-130355	0	1.0
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208051-208073	0	1.0
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148585-148607	0	1.0
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131702-131724	0	1.0
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131555-131577	0	1.0
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71312-71334	0	1.0
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44076-44098	0	1.0
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44938-44960	0	1.0
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29070-29092	0	1.0
NZ_CP013241_5	5.6\|176002\|29\|NZ_CP013241\|PILER-CR	176002-176030	29	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155418-155446	0	1.0
NZ_CP013241_5	5.6\|176002\|29\|NZ_CP013241\|PILER-CR	176002-176030	29	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130320-130348	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71313-71331	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154462-154480	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44077-44095	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44939-44957	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29071-29089	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208054-208072	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148588-148606	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131705-131723	0	1.0
NZ_CP013241_5	5.8\|176135\|19\|NZ_CP013241\|PILER-CR	176135-176153	19	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131558-131576	0	1.0
NZ_CP013241_6	6.3\|233382\|38\|NZ_CP013241\|PILER-CR	233382-233419	38	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	77916-77953	0	1.0
NZ_CP013241_6	6.3\|233382\|38\|NZ_CP013241\|PILER-CR	233382-233419	38	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	80884-80921	0	1.0
NZ_CP013241_6	6.6\|233382\|40\|NZ_CP013241\|CRISPRCasFinder,CRT	233382-233421	40	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	80882-80921	0	1.0
NZ_CP013241_6	6.6\|233382\|40\|NZ_CP013241\|CRISPRCasFinder,CRT	233382-233421	40	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	77916-77955	0	1.0
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71312-71334	1	0.957
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44076-44098	1	0.957
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44938-44960	1	0.957
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208051-208073	1	0.957
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148585-148607	1	0.957
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131702-131724	1	0.957
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131555-131577	1	0.957
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29070-29092	1	0.957
NZ_CP013241_3	3.3\|173884\|37\|NZ_CP013241\|CRISPRCasFinder	173884-173920	37	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71881-71917	1	0.973
NZ_CP013241_3	3.3\|173884\|37\|NZ_CP013241\|CRISPRCasFinder	173884-173920	37	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	207468-207504	1	0.973
NZ_CP013241_3	3.3\|173884\|37\|NZ_CP013241\|CRISPRCasFinder	173884-173920	37	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148068-148104	1	0.973
NZ_CP013241_3	3.4\|173949\|39\|NZ_CP013241\|CRISPRCasFinder	173949-173987	39	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131165-131203	1	0.974
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	45053-45087	1	0.971
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153771-153805	1	0.971
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27898-27932	1	0.971
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	677-711	1	0.971
NZ_CP013241_4	4.7\|174774\|38\|NZ_CP013241\|CRISPRCasFinder	174774-174811	38	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	611-648	1	0.974
NZ_CP013241_4	4.7\|174774\|38\|NZ_CP013241\|CRISPRCasFinder	174774-174811	38	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44184-44221	1	0.974
NZ_CP013241_4	4.7\|174774\|38\|NZ_CP013241\|CRISPRCasFinder	174774-174811	38	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27961-27998	1	0.974
NZ_CP013241_4	4.11\|175029\|37\|NZ_CP013241\|CRISPRCasFinder	175029-175065	37	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	43506-43542	1	0.973
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130266-130288	1	0.957
NZ_CP013241_4	4.14\|175213\|23\|NZ_CP013241\|CRISPRCasFinder	175213-175235	23	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154461-154483	1	0.957
NZ_CP013241_4	4.19\|175520\|23\|NZ_CP013241\|CRISPRCasFinder	175520-175542	23	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131140-131162	1	0.957
NZ_CP013241_4	4.21\|174375\|51\|NZ_CP013241\|CRT	174375-174425	51	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	132416-132466	1	0.98
NZ_CP013241_4	4.27\|174765\|47\|NZ_CP013241\|CRT	174765-174811	47	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44175-44221	1	0.979
NZ_CP013241_4	4.27\|174765\|47\|NZ_CP013241\|CRT	174765-174811	47	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	611-657	1	0.979
NZ_CP013241_4	4.27\|174765\|47\|NZ_CP013241\|CRT	174765-174811	47	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27952-27998	1	0.979
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71303-71334	1	0.969
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44067-44098	1	0.969
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44929-44960	1	0.969
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208051-208082	1	0.969
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148585-148616	1	0.969
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131702-131733	1	0.969
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131555-131586	1	0.969
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29061-29092	1	0.969
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131140-131171	1	0.969
NZ_CP013241_5	5.1\|175930\|37\|NZ_CP013241\|CRISPRCasFinder	175930-175966	37	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71881-71917	1	0.973
NZ_CP013241_5	5.1\|175930\|37\|NZ_CP013241\|CRISPRCasFinder	175930-175966	37	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	207468-207504	1	0.973
NZ_CP013241_5	5.1\|175930\|37\|NZ_CP013241\|CRISPRCasFinder	175930-175966	37	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148068-148104	1	0.973
NZ_CP013241_5	5.3\|176062\|38\|NZ_CP013241\|CRISPRCasFinder	176062-176099	38	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29259-29296	1	0.974
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130266-130288	1	0.957
NZ_CP013241_5	5.4\|176128\|23\|NZ_CP013241\|CRISPRCasFinder	176128-176150	23	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154461-154483	1	0.957
NZ_CP013241_5	5.7\|176069\|28\|NZ_CP013241\|PILER-CR	176069-176096	28	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155485-155512	1	0.964
NZ_CP013241_5	5.7\|176069\|28\|NZ_CP013241\|PILER-CR	176069-176096	28	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29266-29293	1	0.964
NZ_CP013241_6	6.3\|233382\|38\|NZ_CP013241\|PILER-CR	233382-233419	38	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	92946-92983	1	0.974
NZ_CP013241_6	6.6\|233382\|40\|NZ_CP013241\|CRISPRCasFinder,CRT	233382-233421	40	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	92946-92985	1	0.975
NZ_CP013241_6	6.7\|233449\|41\|NZ_CP013241\|CRT	233449-233489	41	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	77983-78023	1	0.976
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	106996-107029	2	0.941
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	248026-248059	2	0.941
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	228748-228781	2	0.941
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	247495-247528	2	0.941
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	193461-193494	2	0.941
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	134655-134688	2	0.941
NZ_CP013241_3	3.1\|173773\|23\|NZ_CP013241\|CRISPRCasFinder	173773-173795	23	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130266-130288	2	0.913
NZ_CP013241_3	3.3\|173884\|37\|NZ_CP013241\|CRISPRCasFinder	173884-173920	37	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44808-44844	2	0.946
NZ_CP013241_3	3.3\|173884\|37\|NZ_CP013241\|CRISPRCasFinder	173884-173920	37	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130641-130677	2	0.946
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	132220-132256	2	0.946
NZ_CP013241_4	4.4\|174584\|33\|NZ_CP013241\|CRISPRCasFinder	174584-174616	33	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154625-154657	2	0.939
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28636-28670	2	0.943
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130139-130173	2	0.943
NZ_CP013241_4	4.7\|174774\|38\|NZ_CP013241\|CRISPRCasFinder	174774-174811	38	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153834-153871	2	0.947
NZ_CP013241_4	4.8\|174840\|36\|NZ_CP013241\|CRISPRCasFinder	174840-174875	36	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27269-27304	2	0.944
NZ_CP013241_4	4.22\|174445\|46\|NZ_CP013241\|CRT	174445-174490	46	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	132220-132265	2	0.957
NZ_CP013241_4	4.24\|174575\|42\|NZ_CP013241\|CRT	174575-174616	42	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154616-154657	2	0.952
NZ_CP013241_4	4.26\|174702\|44\|NZ_CP013241\|CRT	174702-174745	44	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	45044-45087	2	0.955
NZ_CP013241_4	4.26\|174702\|44\|NZ_CP013241\|CRT	174702-174745	44	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27889-27932	2	0.955
NZ_CP013241_4	4.26\|174702\|44\|NZ_CP013241\|CRT	174702-174745	44	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	677-720	2	0.955
NZ_CP013241_4	4.27\|174765\|47\|NZ_CP013241\|CRT	174765-174811	47	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153825-153871	2	0.957
NZ_CP013241_4	4.31\|175020\|46\|NZ_CP013241\|CRT	175020-175065	46	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	43497-43542	2	0.957
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130266-130297	2	0.938
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27270-27303	2	0.941
NZ_CP013241_5	5.2\|175995\|39\|NZ_CP013241\|CRISPRCasFinder	175995-176033	39	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29192-29230	2	0.949
NZ_CP013241_5	5.3\|176062\|38\|NZ_CP013241\|CRISPRCasFinder	176062-176099	38	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155478-155515	2	0.947
NZ_CP013241_5	5.6\|176002\|29\|NZ_CP013241\|PILER-CR	176002-176030	29	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29199-29227	2	0.931
NZ_CP013241_6	6.3\|233382\|38\|NZ_CP013241\|PILER-CR	233382-233419	38	NZ_CP031099	Clostridium botulinum strain CFSAN034202 plasmid p2_CFSAN034202, complete sequence	4116-4153	2	0.947
NZ_CP013241_6	6.3\|233382\|38\|NZ_CP013241\|PILER-CR	233382-233419	38	NZ_CP014146	Clostridium botulinum strain CDC_67190 plasmid pNPD12_1, complete sequence	5803-5840	2	0.947
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	32819-32852	3	0.912
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	1749-1782	3	0.912
NZ_CP013241_4	4.8\|174840\|36\|NZ_CP013241\|CRISPRCasFinder	174840-174875	36	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131362-131397	3	0.917
NZ_CP013241_4	4.13\|175159\|26\|NZ_CP013241\|CRISPRCasFinder	175159-175184	26	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148636-148661	3	0.885
NZ_CP013241_4	4.16\|175324\|38\|NZ_CP013241\|CRISPRCasFinder	175324-175361	38	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131844-131881	3	0.921
NZ_CP013241_4	4.19\|175520\|23\|NZ_CP013241\|CRISPRCasFinder	175520-175542	23	MT840186	Bacteriophage sp. contig_1047 genomic sequence	8331-8353	3	0.87
NZ_CP013241_4	4.19\|175520\|23\|NZ_CP013241\|CRISPRCasFinder	175520-175542	23	MN693868	Marine virus AFVG_250M1130, complete genome	17051-17073	3	0.87
NZ_CP013241_4	4.26\|174702\|44\|NZ_CP013241\|CRT	174702-174745	44	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153762-153805	3	0.932
NZ_CP013241_4	4.28\|174831\|45\|NZ_CP013241\|CRT	174831-174875	45	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131362-131406	3	0.933
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154452-154483	3	0.906
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	70988-71021	3	0.912
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	70523-70556	3	0.912
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208364-208397	3	0.912
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208829-208862	3	0.912
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131363-131396	3	0.912
NZ_CP013241_5	5.5\|176179\|37\|NZ_CP013241\|CRISPRCasFinder	176179-176215	37	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	129832-129868	3	0.919
NZ_CP013241_5	5.5\|176179\|37\|NZ_CP013241\|CRISPRCasFinder	176179-176215	37	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	130639-130675	3	0.919
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	1038-1074	4	0.892
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	211951-211987	4	0.892
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	167983-168019	4	0.892
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	145957-145993	4	0.892
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	170196-170232	4	0.892
NZ_CP013241_4	4.8\|174840\|36\|NZ_CP013241\|CRISPRCasFinder	174840-174875	36	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	70987-71022	4	0.889
NZ_CP013241_4	4.8\|174840\|36\|NZ_CP013241\|CRISPRCasFinder	174840-174875	36	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208363-208398	4	0.889
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	70462-70493	4	0.875
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208892-208923	4	0.875
NZ_CP013241_4	4.19\|175520\|23\|NZ_CP013241\|CRISPRCasFinder	175520-175542	23	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	584946-584968	4	0.826
NZ_CP013241_4	4.26\|174702\|44\|NZ_CP013241\|CRT	174702-174745	44	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130139-130182	4	0.909
NZ_CP013241_6	6.6\|233382\|40\|NZ_CP013241\|CRISPRCasFinder,CRT	233382-233421	40	NZ_CP031099	Clostridium botulinum strain CFSAN034202 plasmid p2_CFSAN034202, complete sequence	4116-4155	4	0.9
NZ_CP013241_6	6.6\|233382\|40\|NZ_CP013241\|CRISPRCasFinder,CRT	233382-233421	40	NZ_CP014146	Clostridium botulinum strain CDC_67190 plasmid pNPD12_1, complete sequence	5803-5842	4	0.9
NZ_CP013241_4	4.12\|175094\|37\|NZ_CP013241\|CRISPRCasFinder	175094-175130	37	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148641-148677	5	0.865
NZ_CP013241_4	4.13\|175159\|26\|NZ_CP013241\|CRISPRCasFinder	175159-175184	26	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	463731-463756	5	0.808
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131910-131941	5	0.844
NZ_CP013241_4	4.32\|175085\|46\|NZ_CP013241\|CRT	175085-175130	46	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148641-148686	5	0.891
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	75934-75963	5	0.833
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	36196-36225	5	0.833
NZ_CP013241_5	5.7\|176069\|28\|NZ_CP013241\|PILER-CR	176069-176096	28	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153647-153674	5	0.821
NZ_CP013241_5	5.7\|176069\|28\|NZ_CP013241\|PILER-CR	176069-176096	28	NC_019561	Helicobacter pylori Aklavik117 plasmid p1HPAKL117, complete sequence	10856-10883	5	0.821
NZ_CP013241_5	5.7\|176069\|28\|NZ_CP013241\|PILER-CR	176069-176096	28	NC_014556	Helicobacter pylori PeCan4 plasmid pHPPC4, complete sequence	7840-7867	5	0.821
NZ_CP013241_5	5.7\|176069\|28\|NZ_CP013241\|PILER-CR	176069-176096	28	MN276049	Acinetobacter phage BS46, complete genome	28039-28066	5	0.821
NZ_CP013241_5	5.6\|176002\|29\|NZ_CP013241\|PILER-CR	176002-176030	29	MG543995	Staphylococcus phage UPMK_1, partial genome	88731-88759	6	0.793
NZ_CP013241_5	5.6\|176002\|29\|NZ_CP013241\|PILER-CR	176002-176030	29	MN694720	Marine virus AFVG_250M584, complete genome	49680-49708	6	0.793
NZ_CP013241_5	5.7\|176069\|28\|NZ_CP013241\|PILER-CR	176069-176096	28	NZ_CP025811	Sulfitobacter sp. SK025 plasmid unnamed3, complete sequence	447-474	6	0.786
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP032740	Enterococcus casseliflavus strain EC-369 plasmid pEC369, complete sequence	54276-54309	7	0.794
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP046125	Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence	97782-97815	7	0.794
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	33806-33837	7	0.781
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	4472-4503	7	0.781
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	280071-280102	7	0.781
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	285129-285160	7	0.781
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	295924-295955	7	0.781
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NZ_CP018322	Alteromonas macleodii strain Te101 plasmid pTE101a, complete sequence	231099-231130	7	0.781
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP025502	Clostridium perfringens strain EHE-NE18 plasmid pJIR3535, complete sequence	61523-61557	7	0.8
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	75933-75964	7	0.781
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	36195-36226	7	0.781
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	MN692983	Marine virus AFVG_117M11, complete genome	9129-9160	7	0.781
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	LC519601	Cronobacter phage vB_CsaP_009 DNA, complete genome	62988-63019	7	0.781
NZ_CP013241_4	4.16\|175324\|38\|NZ_CP013241\|CRISPRCasFinder	175324-175361	38	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	70796-70833	7	0.816
NZ_CP013241_4	4.16\|175324\|38\|NZ_CP013241\|CRISPRCasFinder	175324-175361	38	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28255-28292	7	0.816
NZ_CP013241_4	4.16\|175324\|38\|NZ_CP013241\|CRISPRCasFinder	175324-175361	38	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208552-208589	7	0.816
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP013706	Clostridium botulinum strain F160 plasmid pRSJ3_1, complete sequence	14557-14588	7	0.781
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NC_011250	Borrelia duttonii Ly plasmid pl40, complete sequence	10685-10716	7	0.781
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28580-28613	7	0.794
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131455-131484	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	MF399199	Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence	174197-174226	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP040051	Acinetobacter baumannii strain VB16141 plasmid unnamed1, complete sequence	68454-68483	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_AP014650	Acinetobacter baumannii strain IOMTU433 plasmid pIOMTU433, complete sequence	90638-90667	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	CP040054	Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence	54754-54783	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP050433	Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence	116040-116069	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	LT605060	Acinetobacter calcoaceticus strain NCTC7364 genome assembly, plasmid: 2	41193-41222	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_KU744946	Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence	167710-167739	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP012005	Acinetobacter baumannii strain ATCC 17978-mff plasmid pAB3, complete sequence	56268-56297	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP018446	Klebsiella pneumoniae strain Kp_Goe_822917 plasmid pKp_Goe_917-7, complete sequence	883-912	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP036332	Klebsiella pneumoniae strain BA28434 plasmid punnamed_3_VBA28434	1681-1710	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	CP052271	Klebsiella pneumoniae strain E16KP0268 plasmid pE16K0268-3, complete sequence	1921-1950	7	0.767
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP053368	Klebsiella pneumoniae strain BA2275 plasmid p_unnamed_1_VBA2275	835-864	7	0.767
NZ_CP013241_5	5.3\|176062\|38\|NZ_CP013241\|CRISPRCasFinder	176062-176099	38	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153640-153677	7	0.816
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	75933-75964	8	0.75
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	36195-36226	8	0.75
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NZ_AP017297	Nostoc sp. NIES-3756 plasmid pNOS3756_2, complete sequence	56871-56902	8	0.75
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NZ_LT667504	Buchnera aphidicola (Cinara confinis) strain BCiconfinis isolate 2801 plasmid pLeuTrp	3070-3106	8	0.784
NZ_CP013241_4	4.8\|174840\|36\|NZ_CP013241\|CRISPRCasFinder	174840-174875	36	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28579-28614	8	0.778
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131454-131485	8	0.75
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	NC_019248	Bartonella sp. TT0105 plasmid pTT0105, complete sequence	13495-13526	8	0.75
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	MT664722	Proteus phage Vb_PmiP-P59, complete genome	29079-29110	8	0.75
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	MT028297	Proteus phage Privateer, complete genome	19428-19459	8	0.75
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	MT740244	Proteus phage 3H10_20, partial genome	20341-20372	8	0.75
NZ_CP013241_4	4.28\|174831\|45\|NZ_CP013241\|CRT	174831-174875	45	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28570-28614	8	0.822
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	MT774391	CrAssphage cr126_1, complete genome	79565-79596	8	0.75
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NZ_CP011283	Enterococcus faecium strain E39 plasmid p2, complete sequence	40030-40061	8	0.75
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NZ_LR135238	Enterococcus faecium isolate E7067 plasmid 4	39029-39060	8	0.75
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NZ_LR135199	Enterococcus faecium isolate E6055 plasmid 3	32851-32882	8	0.75
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NZ_LR135261	Enterococcus faecium isolate E4457 plasmid 4	6131-6162	8	0.75
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NZ_CP041258	Enterococcus faecium strain 515 plasmid p27, complete sequence	44247-44278	8	0.75
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NZ_LR135374	Enterococcus faecium isolate E8172 plasmid 3	32851-32882	8	0.75
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NZ_CP040851	Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence	33408-33439	8	0.75
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	MN693101	Marine virus AFVG_25M559, complete genome	5382-5415	8	0.765
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NC_014508	Enterococcus faecalis plasmid pEF-01, complete sequence	8736-8765	8	0.733
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP038165	Enterococcus faecium strain HB2-2 plasmid pHB2-2, complete sequence	12041-12070	8	0.733
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP038169	Enterococcus faecium strain SCBC1 plasmid pSCBC1, complete sequence	14873-14902	8	0.733
NZ_CP013241_4	4.42\|174905\|30\|NZ_CP013241\|PILER-CR	174905-174934	30	NZ_CP038173	Enterococcus faecium strain YN2-1 plasmid pYN2-1, complete sequence	19721-19750	8	0.733
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NC_019763	Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.01, complete sequence	120920-120951	9	0.719
NZ_CP013241_4	4.4\|174584\|33\|NZ_CP013241\|CRISPRCasFinder	174584-174616	33	NZ_CP038605	Salmonella enterica subsp. enterica serovar Senftenberg strain CFIAFB20170120 plasmid pGTAFD2016-MI-0253.1, complete sequence	15539-15571	9	0.727
NZ_CP013241_4	4.4\|174584\|33\|NZ_CP013241\|CRISPRCasFinder	174584-174616	33	NZ_CP026380	Salmonella enterica subsp. enterica serovar Senftenberg strain N17 plasmid pN17-509	28765-28797	9	0.727
NZ_CP013241_4	4.4\|174584\|33\|NZ_CP013241\|CRISPRCasFinder	174584-174616	33	NZ_CP026380	Salmonella enterica subsp. enterica serovar Senftenberg strain N17 plasmid pN17-509	26052-26084	9	0.727
NZ_CP013241_4	4.4\|174584\|33\|NZ_CP013241\|CRISPRCasFinder	174584-174616	33	NZ_CP010110	Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence	65592-65624	9	0.727
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP018750	Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence	12756-12790	9	0.743
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NC_018983	Borrelia burgdorferi 297 plasmid 297_cp26, complete sequence	9159-9193	9	0.743
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NC_017395	Borreliella burgdorferi JD1 plasmid JD1 cp26, complete sequence	9164-9198	9	0.743
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP015797	Borrelia mayonii strain MN14-1539 plasmid cp26, complete sequence	9102-9136	9	0.743
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP015781	Borrelia mayonii strain MN14-1420 plasmid cp26, complete sequence	9102-9136	9	0.743
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NC_017725	Borreliella garinii BgVir plasmid cp26, complete sequence	9029-9063	9	0.743
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP028867	Borreliella garinii strain 20047 plasmid cp26, complete sequence	13019-13053	9	0.743
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	NZ_CP018446	Klebsiella pneumoniae strain Kp_Goe_822917 plasmid pKp_Goe_917-7, complete sequence	882-913	9	0.719
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	NZ_CP036332	Klebsiella pneumoniae strain BA28434 plasmid punnamed_3_VBA28434	1680-1711	9	0.719
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	CP052271	Klebsiella pneumoniae strain E16KP0268 plasmid pE16K0268-3, complete sequence	1920-1951	9	0.719
NZ_CP013241_4	4.9\|174904\|32\|NZ_CP013241\|CRISPRCasFinder	174904-174935	32	NZ_CP053368	Klebsiella pneumoniae strain BA2275 plasmid p_unnamed_1_VBA2275	834-865	9	0.719
NZ_CP013241_4	4.18\|175457\|35\|NZ_CP013241\|CRISPRCasFinder	175457-175491	35	MN850590	Escherichia phage moha, complete genome	61560-61594	9	0.743
NZ_CP013241_4	4.18\|175457\|35\|NZ_CP013241\|CRISPRCasFinder	175457-175491	35	MK524178	Escherichia phage PHB12, complete genome	108963-108997	9	0.743
NZ_CP013241_4	4.18\|175457\|35\|NZ_CP013241\|CRISPRCasFinder	175457-175491	35	MH243438	Escherichia phage vB_EcoM_NBG1, complete genome	49277-49311	9	0.743
NZ_CP013241_4	4.18\|175457\|35\|NZ_CP013241\|CRISPRCasFinder	175457-175491	35	MT782071	Escherichia phage JN02, complete genome	48625-48659	9	0.743
NZ_CP013241_4	4.18\|175457\|35\|NZ_CP013241\|CRISPRCasFinder	175457-175491	35	MK373782	Escherichia phage vB_EcoM_KAW3E185, complete genome	51191-51225	9	0.743
NZ_CP013241_4	4.22\|174445\|46\|NZ_CP013241\|CRT	174445-174490	46	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	1029-1074	9	0.804
NZ_CP013241_4	4.22\|174445\|46\|NZ_CP013241\|CRT	174445-174490	46	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	167983-168028	9	0.804
NZ_CP013241_4	4.22\|174445\|46\|NZ_CP013241\|CRT	174445-174490	46	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	145957-146002	9	0.804
NZ_CP013241_4	4.22\|174445\|46\|NZ_CP013241\|CRT	174445-174490	46	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	211942-211987	9	0.804
NZ_CP013241_4	4.22\|174445\|46\|NZ_CP013241\|CRT	174445-174490	46	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	170196-170241	9	0.804
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NC_013793	Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence	94174-94205	9	0.719
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP023491	Lactobacillus plantarum strain NCIMB 700965 plasmid unamed1, complete sequence	280-313	10	0.706
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP014325	Borrelia anserina Es isolate UTHSCSA plasmid lpA89, complete sequence	20226-20259	10	0.706
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP026506	Lactobacillus plantarum strain NCIMB700965.EF.A plasmid punamed1, complete sequence	66123-66156	10	0.706
NZ_CP013241_3	3.2\|173824\|32\|NZ_CP013241\|CRISPRCasFinder	173824-173855	32	NZ_CP012296	Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence	10787-10818	10	0.688
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NZ_LR215000	Mycoplasma conjunctivae strain NCTC10147 plasmid 4	2505-2541	10	0.73
NZ_CP013241_4	4.2\|174454\|37\|NZ_CP013241\|CRISPRCasFinder	174454-174490	37	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	45429-45465	10	0.73
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP013332	Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence	36920-36954	10	0.714
NZ_CP013241_4	4.12\|175094\|37\|NZ_CP013241\|CRISPRCasFinder	175094-175130	37	KT070867	Bacillus phage PBC2, complete genome	5500-5536	10	0.73
NZ_CP013241_4	4.15\|175264\|32\|NZ_CP013241\|CRISPRCasFinder	175264-175295	32	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	263937-263968	10	0.688
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP018750	Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence	891-922	10	0.688
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NZ_CP028867	Borreliella garinii strain 20047 plasmid cp26, complete sequence	24887-24918	10	0.688
NZ_CP013241_4	4.34\|175204\|32\|NZ_CP013241\|CRT	175204-175235	32	NC_017725	Borreliella garinii BgVir plasmid cp26, complete sequence	24297-24328	10	0.688
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	MN693885	Marine virus AFVG_250M83, complete genome	13674-13705	10	0.688
NZ_CP013241_4	4.39\|175511\|32\|NZ_CP013241\|CRT	175511-175542	32	NC_007389	Spiroplasma citri pSci3 plasmid	3575-3606	10	0.688
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	MN693185	Marine virus AFVG_25M398, complete genome	48276-48309	10	0.706
NZ_CP013241_4	4.41\|174841\|34\|NZ_CP013241\|PILER-CR	174841-174874	34	MN693267	Marine virus AFVG_25M289, complete genome	49049-49082	10	0.706
NZ_CP013241_5	5.5\|176179\|37\|NZ_CP013241\|CRISPRCasFinder	176179-176215	37	NZ_CP048432	Staphylococcus aureus strain SA1428 plasmid p1	12326-12362	10	0.73
NZ_CP013241_6	6.2\|233316\|37\|NZ_CP013241\|PILER-CR	233316-233352	37	MT774387	CrAssphage cr111_1, complete genome	71789-71825	10	0.73
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NC_006872	Clostridium perfringens plasmid pBCNF5603 DNA, complete sequence	35152-35185	11	0.676
NZ_CP013241_2	2.1\|122172\|34\|NZ_CP013241\|CRISPRCasFinder	122172-122205	34	NZ_CP013044	Clostridium perfringens strain JP55 plasmid pJFP55J, complete sequence	40666-40699	11	0.676
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_LR135249	Enterococcus faecium isolate E6988 plasmid 7	8816-8850	11	0.686
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_LR135240	Enterococcus faecium isolate E7067 plasmid 6	8816-8850	11	0.686
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_LR135224	Enterococcus faecium isolate E7040 plasmid 6	10707-10741	11	0.686
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_LR135349	Enterococcus faecium isolate E8202 plasmid 6	2598-2632	11	0.686
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_LR135361	Enterococcus faecium isolate E7948 plasmid 5	3225-3259	11	0.686
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_CP044278	Enterococcus faecium strain V2937 plasmid pHVH-V2937-4, complete sequence	4152-4186	11	0.686
NZ_CP013241_4	4.6\|174711\|35\|NZ_CP013241\|CRISPRCasFinder	174711-174745	35	NZ_KY595969	Enterococcus faecium strain VREfm87 plasmid pMIS005, complete sequence	1466-1500	11	0.686

1. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtgc	Protospacer
***********************

2. spacer 4.1|174384|42|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 0, identity: 1.0

cttaaatttaacaaaaataatactaatagtagtacatataag	CRISPR spacer
cttaaatttaacaaaaataatactaatagtagtacatataag	Protospacer
******************************************

3. spacer 4.11|175029|37|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 0, identity: 1.0

catttataaaataccaaagtcagaggtaaaattatag	CRISPR spacer
catttataaaataccaaagtcagaggtaaaattatag	Protospacer
*************************************

4. spacer 4.12|175094|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

cttatatttatgcatttgtaaaacctccgttcgtttg	CRISPR spacer
cttatatttatgcatttgtaaaacctccgttcgtttg	Protospacer
*************************************

5. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

6. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

7. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

8. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

9. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

10. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

11. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

12. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

13. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

ctagttattctttttgttttttacacacgcta	CRISPR spacer
ctagttattctttttgttttttacacacgcta	Protospacer
********************************

14. spacer 4.16|175324|38|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

ccttattaacaataagaaattaggaggttccttgctag	CRISPR spacer
ccttattaacaataagaaattaggaggttccttgctag	Protospacer
**************************************

15. spacer 4.17|175390|39|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

ctaataaaaattaggacaataaacgtttgcggagtttag	CRISPR spacer
ctaataaaaattaggacaataaacgtttgcggagtttag	Protospacer
***************************************

16. spacer 4.18|175457|35|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

ctattttccctttcattaattaaataaaataggtc	CRISPR spacer
ctattttccctttcattaattaaataaaataggtc	Protospacer
***********************************

17. spacer 4.20|175571|38|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

ccaccttattccattagcgatattccaaatatgtgttg	CRISPR spacer
ccaccttattccattagcgatattccaaatatgtgttg	Protospacer
**************************************

18. spacer 4.31|175020|46|NZ_CP013241|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaaacatttataaaataccaaagtcagaggtaaaattatag	CRISPR spacer
gaagttaaacatttataaaataccaaagtcagaggtaaaattatag	Protospacer
**********************************************

19. spacer 4.32|175085|46|NZ_CP013241|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaagttaaacttatatttatgcatttgtaaaacctccgttcgtttg	CRISPR spacer
aaagttaaacttatatttatgcatttgtaaaacctccgttcgtttg	Protospacer
**********************************************

20. spacer 4.35|175255|41|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

gaggttaaactagttattctttttgttttttacacacgcta	CRISPR spacer
gaggttaaactagttattctttttgttttttacacacgcta	Protospacer
*****************************************

21. spacer 4.36|175315|47|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

aaagttaagccttattaacaataagaaattaggaggttccttgctag	CRISPR spacer
aaagttaagccttattaacaataagaaattaggaggttccttgctag	Protospacer
***********************************************

22. spacer 4.37|175381|48|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaaactaataaaaattaggacaataaacgtttgcggagtttag	CRISPR spacer
gaagttaaactaataaaaattaggacaataaacgtttgcggagtttag	Protospacer
************************************************

23. spacer 4.38|175448|44|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

taagttaagctattttccctttcattaattaaataaaataggtc	CRISPR spacer
taagttaagctattttccctttcattaattaaataaaataggtc	Protospacer
********************************************

24. spacer 4.40|175562|47|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

caagttaaaccaccttattccattagcgatattccaaatatgtgttg	CRISPR spacer
caagttaaaccaccttattccattagcgatattccaaatatgtgttg	Protospacer
***********************************************

25. spacer 5.1|175930|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

catatgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
catatgtatatttacaaatgagagaacaaattaattg	Protospacer
*************************************

26. spacer 5.1|175930|37|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

catatgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
catatgtatatttacaaatgagagaacaaattaattg	Protospacer
*************************************

27. spacer 5.2|175995|39|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

cgtatcttatttttaggtaaaacctctcttaaattcttg	CRISPR spacer
cgtatcttatttttaggtaaaacctctcttaaattcttg	Protospacer
***************************************

28. spacer 5.2|175995|39|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

cgtatcttatttttaggtaaaacctctcttaaattcttg	CRISPR spacer
cgtatcttatttttaggtaaaacctctcttaaattcttg	Protospacer
***************************************

29. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

30. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

31. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

32. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

33. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

34. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

35. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

36. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
***********************

37. spacer 5.6|176002|29|NZ_CP013241|PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

tatttttaggtaaaacctctcttaaattc	CRISPR spacer
tatttttaggtaaaacctctcttaaattc	Protospacer
*****************************

38. spacer 5.6|176002|29|NZ_CP013241|PILER-CR matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

tatttttaggtaaaacctctcttaaattc	CRISPR spacer
tatttttaggtaaaacctctcttaaattc	Protospacer
*****************************

39. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

40. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

41. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

42. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

43. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

44. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

45. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

46. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

47. spacer 5.8|176135|19|NZ_CP013241|PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 0, identity: 1.0

aaataatagtacatagttg	CRISPR spacer
aaataatagtacatagttg	Protospacer
*******************

48. spacer 6.3|233382|38|NZ_CP013241|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

caagtggaagtcctttcaatattttttttagttgttaa	CRISPR spacer
caagtggaagtcctttcaatattttttttagttgttaa	Protospacer
**************************************

49. spacer 6.3|233382|38|NZ_CP013241|PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 0, identity: 1.0

caagtggaagtcctttcaatattttttttagttgttaa	CRISPR spacer
caagtggaagtcctttcaatattttttttagttgttaa	Protospacer
**************************************

50. spacer 6.6|233382|40|NZ_CP013241|CRISPRCasFinder,CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 0, identity: 1.0

caagtggaagtcctttcaatattttttttagttgttaagt	CRISPR spacer
caagtggaagtcctttcaatattttttttagttgttaagt	Protospacer
****************************************

51. spacer 6.6|233382|40|NZ_CP013241|CRISPRCasFinder,CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

caagtggaagtcctttcaatattttttttagttgttaagt	CRISPR spacer
caagtggaagtcctttcaatattttttttagttgttaagt	Protospacer
****************************************

52. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
*********************.*

53. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
*********************.*

54. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
*********************.*

55. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
*********************.*

56. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
*********************.*

57. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
*********************.*

58. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
*********************.*

59. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtacatagttgtac	Protospacer
*********************.*

60. spacer 3.3|173884|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 1, identity: 0.973

tatacgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
tatatgtatatttacaaatgagagaacaaattaattg	Protospacer
****.********************************

61. spacer 3.3|173884|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 1, identity: 0.973

tatacgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
tatatgtatatttacaaatgagagaacaaattaattg	Protospacer
****.********************************

62. spacer 3.3|173884|37|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.973

tatacgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
tatatgtatatttacaaatgagagaacaaattaattg	Protospacer
****.********************************

63. spacer 3.4|173949|39|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 1, identity: 0.974

catataaagccactagagcttacaatgaaaacaaccatc	CRISPR spacer
catataaagccactagagcttacaatgaaaacaactatc	Protospacer
***********************************.***

64. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.971

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
attaaataaaactaaaaatttttataaatcgatag	Protospacer
 **********************************

65. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 1, identity: 0.971

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
cttaaataaaactaaaaatttttataaatcggtag	Protospacer
*******************************.***

66. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.971

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
cttaaataaaactaaaaatttttataaatcggtag	Protospacer
*******************************.***

67. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.971

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
cttaaataaaactaaaaatttttataaatcggtag	Protospacer
*******************************.***

68. spacer 4.7|174774|38|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.974

tccatcttactctattttccatatttcaaatatgcgtg	CRISPR spacer
tccatcttactccattttccatatttcaaatatgcgtg	Protospacer
************.*************************

69. spacer 4.7|174774|38|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.974

tccatcttactctattttccatatttcaaatatgcgtg	CRISPR spacer
tccatcttactccattttccatatttcaaatatgcgtg	Protospacer
************.*************************

70. spacer 4.7|174774|38|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.974

tccatcttactctattttccatatttcaaatatgcgtg	CRISPR spacer
tccatcttactccattttccatatttcaaatatgcgtg	Protospacer
************.*************************

71. spacer 4.11|175029|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.973

catttataaaataccaaagtcagaggtaaaattatag	CRISPR spacer
catttataaaataccaaagtcggaggtaaaattatag	Protospacer
*********************.***************

72. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtgcatagttgtac	Protospacer
***********.***********

73. spacer 4.14|175213|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtgc	Protospacer
*********************.*

74. spacer 4.19|175520|23|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 1, identity: 0.957

ctaaaaaagtaataataaattat	CRISPR spacer
ctaaaaaggtaataataaattat	Protospacer
*******.***************

75. spacer 4.21|174375|51|NZ_CP013241|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 1, identity: 0.98

aaggttagacttaaatttaacaaaaataatactaatagtagtacatataag	CRISPR spacer
aaagttagacttaaatttaacaaaaataatactaatagtagtacatataag	Protospacer
**.************************************************

76. spacer 4.27|174765|47|NZ_CP013241|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.979

taagttaaatccatcttactctattttccatatttcaaatatgcgtg	CRISPR spacer
taagttaaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
*********************.*************************

77. spacer 4.27|174765|47|NZ_CP013241|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.979

taagttaaatccatcttactctattttccatatttcaaatatgcgtg	CRISPR spacer
taagttaaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
*********************.*************************

78. spacer 4.27|174765|47|NZ_CP013241|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.979

taagttaaatccatcttactctattttccatatttcaaatatgcgtg	CRISPR spacer
taagttaaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
*********************.*************************

79. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 1, identity: 0.969

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtacatagttgtac	Protospacer
***.****************************

80. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.969

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtacatagttgtac	Protospacer
***.****************************

81. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.969

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtacatagttgtac	Protospacer
***.****************************

82. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 1, identity: 0.969

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtacatagttgtac	Protospacer
***.****************************

83. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.969

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtacatagttgtac	Protospacer
***.****************************

84. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 1, identity: 0.969

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtacatagttgtac	Protospacer
***.****************************

85. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 1, identity: 0.969

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtacatagttgtac	Protospacer
***.****************************

86. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.969

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtacatagttgtac	Protospacer
***.****************************

87. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 1, identity: 0.969

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
gaagttaaactaaaaaggtaataataaattat	Protospacer
****************.***************

88. spacer 5.1|175930|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 1, identity: 0.973

catatgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
tatatgtatatttacaaatgagagaacaaattaattg	Protospacer
.************************************

89. spacer 5.1|175930|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 1, identity: 0.973

catatgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
tatatgtatatttacaaatgagagaacaaattaattg	Protospacer
.************************************

90. spacer 5.1|175930|37|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.973

catatgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
tatatgtatatttacaaatgagagaacaaattaattg	Protospacer
.************************************

91. spacer 5.3|176062|38|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.974

cttttctattctgcaactctcttataaaaaaagaactc	CRISPR spacer
cttttctattctgcacctctcttataaaaaaagaactc	Protospacer
*************** **********************

92. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtgcatagttgtac	Protospacer
***********.***********

93. spacer 5.4|176128|23|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 1, identity: 0.957

caaataatagtacatagttgtac	CRISPR spacer
caaataatagtacatagttgtgc	Protospacer
*********************.*

94. spacer 5.7|176069|28|NZ_CP013241|PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 1, identity: 0.964

attctgcaactctcttataaaaaaagaa	CRISPR spacer
attctgcacctctcttataaaaaaagaa	Protospacer
******** *******************

95. spacer 5.7|176069|28|NZ_CP013241|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.964

attctgcaactctcttataaaaaaagaa	CRISPR spacer
attctgcacctctcttataaaaaaagaa	Protospacer
******** *******************

96. spacer 6.3|233382|38|NZ_CP013241|PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.974

caagtggaagtcctttcaatattttttttagttgttaa-	CRISPR spacer
caagtggaagtcctttcaata-tttttttagttgttaag	Protospacer
********************* ****************

97. spacer 6.6|233382|40|NZ_CP013241|CRISPRCasFinder,CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.975

caagtggaagtcctttcaatattttttttagttgttaagt-	CRISPR spacer
caagtggaagtcctttcaata-tttttttagttgttaagtt	Protospacer
********************* ******************

98. spacer 6.7|233449|41|NZ_CP013241|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.976

tcacccaataatttagcttcaaggagctaagactttctaat	CRISPR spacer
tcacccaataatttagcttcaaggagctaagactttctagt	Protospacer
***************************************.*

99. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 2, identity: 0.941

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttggttgtcttataaaaaatactaaatatattca	Protospacer
*** ****************************.*

100. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 2, identity: 0.941

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttggttgtcttataaaaaatactaaatatattca	Protospacer
*** ****************************.*

101. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 2, identity: 0.941

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttggttgtcttataaaaaatactaaatatattca	Protospacer
*** ****************************.*

102. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 2, identity: 0.941

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttggttgtcttataaaaaatactaaatatattca	Protospacer
*** ****************************.*

103. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 2, identity: 0.941

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttggttgtcttataaaaaatactaaatatattca	Protospacer
*** ****************************.*

104. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 2, identity: 0.941

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttggttgtcttataaaaaatactaaatatattca	Protospacer
*** ****************************.*

105. spacer 3.1|173773|23|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 2, identity: 0.913

caaataatagtacatagttgtgc	CRISPR spacer
caaataatagtgcatagttgtac	Protospacer
***********.*********.*

106. spacer 3.3|173884|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 2, identity: 0.946

tatacgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
catatgtatatttacaaatgagagaacaaattaattg	Protospacer
.***.********************************

107. spacer 3.3|173884|37|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 2, identity: 0.946

tatacgtatatttacaaatgagagaacaaattaattg	CRISPR spacer
catatgtatatttacaaatgagagaacaaattaattg	Protospacer
.***.********************************

108. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 2, identity: 0.946

tttgttttttatattttctatatcctatatattattg	CRISPR spacer
cttgttttttatattttctatatcttatatattattg	Protospacer
.***********************.************

109. spacer 4.4|174584|33|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 2, identity: 0.939

ttttttctttaatactttcattagtacccctgg	CRISPR spacer
ttttttctttaatactttcattagtacccctat	Protospacer
*******************************.

110. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 2, identity: 0.943

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
cttaaataaaactaaaaatttttgtaaatcaatag	Protospacer
***********************.******.****

111. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 2, identity: 0.943

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
attaaataaaactaaaaatttttataaatcgatat	Protospacer
 *********************************

112. spacer 4.7|174774|38|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 2, identity: 0.947

tccatcttactctattttccatatttcaaatatgcgtg	CRISPR spacer
tccatcttacttcattttccatatttcaaatatgcgtg	Protospacer
***********..*************************

113. spacer 4.8|174840|36|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 2, identity: 0.944

ctaagaaaaattataaaacatggaggatgatactag	CRISPR spacer
cttagaaaaattataaaacatggaggatgatgctag	Protospacer
** ****************************.****

114. spacer 4.22|174445|46|NZ_CP013241|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 2, identity: 0.957

gaagttaaatttgttttttatattttctatatcctatatattattg	CRISPR spacer
gaagttaaacttgttttttatattttctatatcttatatattattg	Protospacer
*********.***********************.************

115. spacer 4.24|174575|42|NZ_CP013241|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 2, identity: 0.952

gcagttaagttttttctttaatactttcattagtacccctgg	CRISPR spacer
gcagttaagttttttctttaatactttcattagtacccctat	Protospacer
****************************************.

116. spacer 4.26|174702|44|NZ_CP013241|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 2, identity: 0.955

aaagttaaacttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
gaagttaaaattaaataaaactaaaaatttttataaatcgatag	Protospacer
.******** **********************************

117. spacer 4.26|174702|44|NZ_CP013241|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 2, identity: 0.955

aaagttaaacttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
gaagttaaacttaaataaaactaaaaatttttataaatcggtag	Protospacer
.***************************************.***

118. spacer 4.26|174702|44|NZ_CP013241|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 2, identity: 0.955

aaagttaaacttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
gaagttaaacttaaataaaactaaaaatttttataaatcggtag	Protospacer
.***************************************.***

119. spacer 4.27|174765|47|NZ_CP013241|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 2, identity: 0.957

taagttaaatccatcttactctattttccatatttcaaatatgcgtg	CRISPR spacer
taagttaaatccatcttacttcattttccatatttcaaatatgcgtg	Protospacer
********************..*************************

120. spacer 4.31|175020|46|NZ_CP013241|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 2, identity: 0.957

gaagttaaacatttataaaataccaaagtcagaggtaaaattatag	CRISPR spacer
taagttaaacatttataaaataccaaagtcggaggtaaaattatag	Protospacer
 *****************************.***************

121. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 2, identity: 0.938

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaacaaataatagtgcatagttgtac	Protospacer
***.****************.***********

122. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 2, identity: 0.941

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
ttagaaaaattataaaacatggaggatgatgcta	Protospacer
* ****************************.***

123. spacer 5.2|175995|39|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 2, identity: 0.949

cgtatcttatttttaggtaaaacctctcttaaattcttg	CRISPR spacer
cgtatcttatttttagataaaacctctcttaaaatcttg	Protospacer
****************.**************** *****

124. spacer 5.3|176062|38|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 2, identity: 0.947

cttttctattctgcaactctcttataaaaaaagaactc	CRISPR spacer
cttttctattctgcacctctcttataaaaaaagaaccc	Protospacer
*************** ********************.*

125. spacer 5.6|176002|29|NZ_CP013241|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 2, identity: 0.931

tatttttaggtaaaacctctcttaaattc	CRISPR spacer
tatttttagataaaacctctcttaaaatc	Protospacer
*********.**************** **

126. spacer 6.3|233382|38|NZ_CP013241|PILER-CR matches to NZ_CP031099 (Clostridium botulinum strain CFSAN034202 plasmid p2_CFSAN034202, complete sequence) position: , mismatch: 2, identity: 0.947

caagtggaagtcctttcaatattttttttagttgttaa	CRISPR spacer
caagtggaagtcctttcaatatttttcttagtagttaa	Protospacer
**************************.***** *****

127. spacer 6.3|233382|38|NZ_CP013241|PILER-CR matches to NZ_CP014146 (Clostridium botulinum strain CDC_67190 plasmid pNPD12_1, complete sequence) position: , mismatch: 2, identity: 0.947

caagtggaagtcctttcaatattttttttagttgttaa	CRISPR spacer
caagtggaagtcctttcaatatttttcttagtagttaa	Protospacer
**************************.***** *****

128. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 3, identity: 0.912

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttggttgtcctataaaaaatactaaatatattca	Protospacer
*** *****.**********************.*

129. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 3, identity: 0.912

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttggttgtcctataaaaaatactaaatatattca	Protospacer
*** *****.**********************.*

130. spacer 4.8|174840|36|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 3, identity: 0.917

ctaagaaaaattataaaacatggaggatgatactag	CRISPR spacer
cttagaaaaattataaaacatggagaatgatactgg	Protospacer
** **********************.********.*

131. spacer 4.13|175159|26|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 3, identity: 0.885

ctaaaaacctcctgtgtgcccctttg	CRISPR spacer
tgtaaaacctcctgtgtgcccctttg	Protospacer
.  ***********************

132. spacer 4.16|175324|38|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 3, identity: 0.921

ccttattaacaataagaaattaggaggttccttgctag	CRISPR spacer
ctttattaacaataaaaaattaggaggttccttactag	Protospacer
*.*************.*****************.****

133. spacer 4.19|175520|23|NZ_CP013241|CRISPRCasFinder matches to MT840186 (Bacteriophage sp. contig_1047 genomic sequence) position: , mismatch: 3, identity: 0.87

ctaaaaaagtaataataaattat	CRISPR spacer
aaaaaaaagttataataaattat	Protospacer
  ******** ************

134. spacer 4.19|175520|23|NZ_CP013241|CRISPRCasFinder matches to MN693868 (Marine virus AFVG_250M1130, complete genome) position: , mismatch: 3, identity: 0.87

ctaaaaaagtaataataaattat	CRISPR spacer
acaaaaaactaataataaattat	Protospacer
 .****** **************

135. spacer 4.26|174702|44|NZ_CP013241|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 3, identity: 0.932

aaagttaaacttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
gaagttaagcttaaataaaactaaaaatttttataaatcggtag	Protospacer
.*******.*******************************.***

136. spacer 4.28|174831|45|NZ_CP013241|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 3, identity: 0.933

aaggttaaactaagaaaaattataaaacatggaggatgatactag	CRISPR spacer
aaggttaaacttagaaaaattataaaacatggagaatgatactgg	Protospacer
*********** **********************.********.*

137. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 3, identity: 0.906

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaagttaaccaaataatagtacatagttgtgc	Protospacer
***.**** *********************.*

138. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 3, identity: 0.912

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
ttagaaacattataaaacatggaggatgatactg	Protospacer
* ***** *************************.

139. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 3, identity: 0.912

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
ttagaaaaattaaaaaacatggagaatgatacta	Protospacer
* ********** ***********.*********

140. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 3, identity: 0.912

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
ttagaaacattataaaacatggaggatgatactg	Protospacer
* ***** *************************.

141. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 3, identity: 0.912

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
ttagaaaaattaaaaaacatggagaatgatacta	Protospacer
* ********** ***********.*********

142. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 3, identity: 0.912

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
ttagaaaaattataaaacatggagaatgatactg	Protospacer
* **********************.********.

143. spacer 5.5|176179|37|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 3, identity: 0.919

cttattttttcttcattaaacaacctcctcattaagg	CRISPR spacer
ttatttttttcttcattaaacaacctcctcattaagg	Protospacer
.*  *********************************

144. spacer 5.5|176179|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 3, identity: 0.919

cttattttttcttcattaaacaacctcctcattaagg	CRISPR spacer
ttatttttttcttcattaaacaacctcctcattaagg	Protospacer
.*  *********************************

145. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 4, identity: 0.892

tttgttttttatattttctatatcctatatattattg	CRISPR spacer
attgttttttatatcttctatatcccatatattattt	Protospacer
 *************.**********.**********

146. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 4, identity: 0.892

tttgttttttatattttctatatcctatatattattg	CRISPR spacer
attgttttttatatcttctatatcccatatattattt	Protospacer
 *************.**********.**********

147. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 4, identity: 0.892

tttgttttttatattttctatatcctatatattattg	CRISPR spacer
attgttttttatatcttctatatcccatatattattt	Protospacer
 *************.**********.**********

148. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 4, identity: 0.892

tttgttttttatattttctatatcctatatattattg	CRISPR spacer
attgttttttatatcttctatatcccatatattattt	Protospacer
 *************.**********.**********

149. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 4, identity: 0.892

tttgttttttatattttctatatcctatatattattg	CRISPR spacer
attgttttttatatcttctatatcccatatattattt	Protospacer
 *************.**********.**********

150. spacer 4.8|174840|36|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 4, identity: 0.889

ctaagaaaaattataaaacatggaggatgatactag	CRISPR spacer
tttagaaacattataaaacatggaggatgatactgg	Protospacer
.* ***** *************************.*

151. spacer 4.8|174840|36|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 4, identity: 0.889

ctaagaaaaattataaaacatggaggatgatactag	CRISPR spacer
tttagaaacattataaaacatggaggatgatactgg	Protospacer
.* ***** *************************.*

152. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 4, identity: 0.875

ctagttattctttttgttttttacacacgcta	CRISPR spacer
ctagttattttttctgttttttacacacacca	Protospacer
*********.***.**************.*.*

153. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 4, identity: 0.875

ctagttattctttttgttttttacacacgcta	CRISPR spacer
ctagttattttttctgttttttacacacacca	Protospacer
*********.***.**************.*.*

154. spacer 4.19|175520|23|NZ_CP013241|CRISPRCasFinder matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 4, identity: 0.826

ctaaaaaagtaataataaattat	CRISPR spacer
agaaaaaagtaataataaatttc	Protospacer
  ******************* .

155. spacer 4.26|174702|44|NZ_CP013241|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 4, identity: 0.909

aaagttaaacttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
ggagttaaaattaaataaaactaaaaatttttataaatcgatat	Protospacer
..******* *********************************

156. spacer 6.6|233382|40|NZ_CP013241|CRISPRCasFinder,CRT matches to NZ_CP031099 (Clostridium botulinum strain CFSAN034202 plasmid p2_CFSAN034202, complete sequence) position: , mismatch: 4, identity: 0.9

caagtggaagtcctttcaatattttttttagttgttaagt	CRISPR spacer
caagtggaagtcctttcaatatttttcttagtagttaaag	Protospacer
**************************.***** *****.

157. spacer 6.6|233382|40|NZ_CP013241|CRISPRCasFinder,CRT matches to NZ_CP014146 (Clostridium botulinum strain CDC_67190 plasmid pNPD12_1, complete sequence) position: , mismatch: 4, identity: 0.9

caagtggaagtcctttcaatattttttttagttgttaagt	CRISPR spacer
caagtggaagtcctttcaatatttttcttagtagttaaag	Protospacer
**************************.***** *****.

158. spacer 4.12|175094|37|NZ_CP013241|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 5, identity: 0.865

cttatatttatgcatttgtaaaacctccgttcgtttg---	CRISPR spacer
cttatatttatgcatttgtaaaacctcc---tgtgtgccc	Protospacer
****************************   .** **

159. spacer 4.13|175159|26|NZ_CP013241|CRISPRCasFinder matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 5, identity: 0.808

ctaaaaacctcctgtgtgcccctttg	CRISPR spacer
aataaaacgtcctgtgtgcccctttc	Protospacer
   ***** ****************

160. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 5, identity: 0.844

ctagttattctttttgttttttacacacgcta	CRISPR spacer
ctagttattttttctgttttttacacacaccg	Protospacer
*********.***.**************.*..

161. spacer 4.32|175085|46|NZ_CP013241|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 5, identity: 0.891

aaagttaaacttatatttatgcatttgtaaaacctccgttcgtttg---	CRISPR spacer
aaagttaaacttatatttatgcatttgtaaaacctcc---tgtgtgccc	Protospacer
*************************************   .** **

162. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 5, identity: 0.833

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
tttatttttttaaaaagtaataataactaa	Protospacer
*. **************.*****.**** *

163. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 5, identity: 0.833

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
tttatttttttaaaaagtaataataactaa	Protospacer
*. **************.*****.**** *

164. spacer 5.7|176069|28|NZ_CP013241|PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 5, identity: 0.821

attctgcaactctcttataaaaaaagaa	CRISPR spacer
attctgcgcctctcttataaaaaagaac	Protospacer
*******. ***************..*

165. spacer 5.7|176069|28|NZ_CP013241|PILER-CR matches to NC_019561 (Helicobacter pylori Aklavik117 plasmid p1HPAKL117, complete sequence) position: , mismatch: 5, identity: 0.821

attctgcaactctcttataaaaaaagaa	CRISPR spacer
attctgcaactcttttgtaaaaaaactc	Protospacer
*************.**.********

166. spacer 5.7|176069|28|NZ_CP013241|PILER-CR matches to NC_014556 (Helicobacter pylori PeCan4 plasmid pHPPC4, complete sequence) position: , mismatch: 5, identity: 0.821

attctgcaactctcttataaaaaaagaa	CRISPR spacer
attctgcaactcttttgtaaaaaaactc	Protospacer
*************.**.********

167. spacer 5.7|176069|28|NZ_CP013241|PILER-CR matches to MN276049 (Acinetobacter phage BS46, complete genome) position: , mismatch: 5, identity: 0.821

attctgc----aactctcttataaaaaaagaa	CRISPR spacer
----tgctaaaaactctcttataaaaacagaa	Protospacer
    ***    **************** ****

168. spacer 5.6|176002|29|NZ_CP013241|PILER-CR matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 6, identity: 0.793

tatttttaggtaaaacctctcttaaattc	CRISPR spacer
ttgctttaagtaaaatctctcttaaattt	Protospacer
*  .****.******.************.

169. spacer 5.6|176002|29|NZ_CP013241|PILER-CR matches to MN694720 (Marine virus AFVG_250M584, complete genome) position: , mismatch: 6, identity: 0.793

tatttttaggtaaaacctctcttaaattc	CRISPR spacer
ttcttttaggtaattcctctcttaaaata	Protospacer
* .**********  *********** *

170. spacer 5.7|176069|28|NZ_CP013241|PILER-CR matches to NZ_CP025811 (Sulfitobacter sp. SK025 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

attctgcaactctcttataaaaaaagaa	CRISPR spacer
ttcttgcatctcttttataaaaaaagac	Protospacer
 *..**** ****.*************

171. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP032740 (Enterococcus casseliflavus strain EC-369 plasmid pEC369, complete sequence) position: , mismatch: 7, identity: 0.794

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttattttatgtataagatatactaaatatattta	Protospacer
**.***  . *****.* ****************

172. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP046125 (Enterococcus casseliflavus strain EC291 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
ttattttatgtataagatatactaaatatattta	Protospacer
**.***  . *****.* ****************

173. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 7, identity: 0.781

ctcgattttttttaaaagtaataacaacctat-	CRISPR spacer
ttttattttttataaaagtaataataa-ttata	Protospacer
.*. ******* ************.** .***

174. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 7, identity: 0.781

ctcgattttttttaaaagtaataacaacctat-	CRISPR spacer
ttttattttttataaaagtaataataa-ttata	Protospacer
.*. ******* ************.** .***

175. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
ttcgattttttttaaaaattataaaagattat	Protospacer
.****************.* **** *. .***

176. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
ttcgattttttttaaaaattataaaagattat	Protospacer
.****************.* **** *. .***

177. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
ttcgattttttttaaaaattataaaagattat	Protospacer
.****************.* **** *. .***

178. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP018322 (Alteromonas macleodii strain Te101 plasmid pTE101a, complete sequence) position: , mismatch: 7, identity: 0.781

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
ttcgattttttttaaaaattataaaagattat	Protospacer
.****************.* **** *. .***

179. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP025502 (Clostridium perfringens strain EHE-NE18 plasmid pJIR3535, complete sequence) position: , mismatch: 7, identity: 0.8

cttaaataaaactaaaaatttttataaatcgatag-	CRISPR spacer
ttaaaataaaactaaatatttttttaaat-aataat	Protospacer
.* ************* ****** ***** .***.

180. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 7, identity: 0.781

ctcgatttttttaaaaagcaataacaacttat	CRISPR spacer
ttttatttttttaaaaagtaataataactaac	Protospacer
.*. **************.*****.**** *.

181. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 7, identity: 0.781

ctcgatttttttaaaaagcaataacaacttat	CRISPR spacer
ttttatttttttaaaaagtaataataactaac	Protospacer
.*. **************.*****.**** *.

182. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to MN692983 (Marine virus AFVG_117M11, complete genome) position: , mismatch: 7, identity: 0.781

ctcgatttttttaaaaagcaataacaacttat	CRISPR spacer
gtcgaaagatttaaaaagaaataaaaacttat	Protospacer
 ****    ********* ***** *******

183. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to LC519601 (Cronobacter phage vB_CsaP_009 DNA, complete genome) position: , mismatch: 7, identity: 0.781

ctagttattctttttgtttttta--cacacgcta	CRISPR spacer
cttgttgttctttttgttttttaatcttaggc--	Protospacer
** ***.****************  * .* **

184. spacer 4.16|175324|38|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 7, identity: 0.816

ccttattaacaataagaaattaggaggttccttgctag	CRISPR spacer
ctttaataacaataaaaaattaggaggttccttattta	Protospacer
*.*** *********.*****************..* .

185. spacer 4.16|175324|38|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 7, identity: 0.816

ccttattaacaataagaaattaggaggttccttgctag	CRISPR spacer
ctttaataacaataaaaaattaggaggttccttattta	Protospacer
*.*** *********.*****************..* .

186. spacer 4.16|175324|38|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 7, identity: 0.816

ccttattaacaataagaaattaggaggttccttgctag	CRISPR spacer
ctttaataacaataaaaaattaggaggttccttattta	Protospacer
*.*** *********.*****************..* .

187. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP013706 (Clostridium botulinum strain F160 plasmid pRSJ3_1, complete sequence) position: , mismatch: 7, identity: 0.781

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
aaaaataaacaaataatagtatatttttcttc	Protospacer
.*** ****************.**  ** * *

188. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NC_011250 (Borrelia duttonii Ly plasmid pl40, complete sequence) position: , mismatch: 7, identity: 0.781

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
aaagttaatctaaaaaagtcataatactgttt	Protospacer
.******* ********** ******   * *

189. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 7, identity: 0.794

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
ttagaaacattataaaacatggaggatttttaaa	Protospacer
* ***** *******************  *   *

190. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cctatttttttaagaagcaataataatcaa	Protospacer
.* **********.*********.**.. *

191. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to MF399199 (Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaggaataacacatga	Protospacer
.. ************** *******  * *

192. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP040051 (Acinetobacter baumannii strain VB16141 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaggaataacacatga	Protospacer
.. ************** *******  * *

193. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_AP014650 (Acinetobacter baumannii strain IOMTU433 plasmid pIOMTU433, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaggaataacacatga	Protospacer
.. ************** *******  * *

194. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to CP040054 (Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaggaataacacatga	Protospacer
.. ************** *******  * *

195. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP050433 (Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaggaataacacatga	Protospacer
.. ************** *******  * *

196. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to LT605060 (Acinetobacter calcoaceticus strain NCTC7364 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaggaataacacatga	Protospacer
.. ************** *******  * *

197. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_KU744946 (Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaggaataacacatga	Protospacer
.. ************** *******  * *

198. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP012005 (Acinetobacter baumannii strain ATCC 17978-mff plasmid pAB3, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaggaataacacatga	Protospacer
.. ************** *******  * *

199. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP018446 (Klebsiella pneumoniae strain Kp_Goe_822917 plasmid pKp_Goe_917-7, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaacaataagaattca	Protospacer
.. *************.****** **.*.*

200. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP036332 (Klebsiella pneumoniae strain BA28434 plasmid punnamed_3_VBA28434) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaacaataagaattca	Protospacer
.. *************.****** **.*.*

201. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to CP052271 (Klebsiella pneumoniae strain E16KP0268 plasmid pE16K0268-3, complete sequence) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaacaataagaattca	Protospacer
.. *************.****** **.*.*

202. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP053368 (Klebsiella pneumoniae strain BA2275 plasmid p_unnamed_1_VBA2275) position: , mismatch: 7, identity: 0.767

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
cttatttttttaaaaaacaataagaattca	Protospacer
.. *************.****** **.*.*

203. spacer 5.3|176062|38|NZ_CP013241|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 7, identity: 0.816

cttttctattctgcaactctcttataaaaaaagaactc	CRISPR spacer
cttttctattctgcgcctctcttataaaaaagaaccct	Protospacer
**************. ***************..* *..

204. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
ttttatttttttaaaaagtaataataactaac	Protospacer
.*. ******** ***********.***. *.

205. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
ttttatttttttaaaaagtaataataactaac	Protospacer
.*. ******** ***********.***. *.

206. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NZ_AP017297 (Nostoc sp. NIES-3756 plasmid pNOS3756_2, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
ccaaattttttttaaaagtattaataacgaaa	Protospacer
*. .**************** ***.***  *

207. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NZ_LT667504 (Buchnera aphidicola (Cinara confinis) strain BCiconfinis isolate 2801 plasmid pLeuTrp) position: , mismatch: 8, identity: 0.784

tttgttttttatattttctatatcctatatattattg----	CRISPR spacer
tttgttttttatattttatataacctgaat----ttgtgaa	Protospacer
***************** **** ***. **    ***

208. spacer 4.8|174840|36|NZ_CP013241|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 8, identity: 0.778

ctaagaaaaattataaaacatggaggatgatactag	CRISPR spacer
cttagaaacattataaaacatggaggatttttaaat	Protospacer
** ***** *******************  *   *

209. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgatttttttaaaaagcaataacaacttat	CRISPR spacer
acctatttttttaagaagcaataataatcaat	Protospacer
 .* **********.*********.**.. **

210. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to NC_019248 (Bartonella sp. TT0105 plasmid pTT0105, complete sequence) position: , mismatch: 8, identity: 0.75

ctcgatttttttaaaaagcaata-----acaacttat	CRISPR spacer
ctcgttttttttaaatagcaatatttctgcaa-----	Protospacer
**** ********** *******     .***

211. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to MT664722 (Proteus phage Vb_PmiP-P59, complete genome) position: , mismatch: 8, identity: 0.75

ctagttattctttttgttttttacacacgcta---	CRISPR spacer
cttgttgttctttttgtttttta---attttaggt	Protospacer
** ***.****************   *. .**

212. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to MT028297 (Proteus phage Privateer, complete genome) position: , mismatch: 8, identity: 0.75

ctagttattctttttgttttttacacacgcta---	CRISPR spacer
cttgttgttctttttgtttttta---atcttaggt	Protospacer
** ***.****************   *. .**

213. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to MT740244 (Proteus phage 3H10_20, partial genome) position: , mismatch: 8, identity: 0.75

ctagttattctttttgttttttacacacgcta---	CRISPR spacer
cttgttgttctttttgtttttta---atcttaggt	Protospacer
** ***.****************   *. .**

214. spacer 4.28|174831|45|NZ_CP013241|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 8, identity: 0.822

aaggttaaactaagaaaaattataaaacatggaggatgatactag	CRISPR spacer
aaggttaaacttagaaacattataaaacatggaggatttttaaat	Protospacer
*********** ***** *******************  *   *

215. spacer 4.39|175511|32|NZ_CP013241|CRT matches to MT774391 (CrAssphage cr126_1, complete genome) position: , mismatch: 8, identity: 0.75

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
gaagctaaactaaaagagtaataatatggacc	Protospacer
****.**********.********** .   .

216. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NZ_CP011283 (Enterococcus faecium strain E39 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
aaacgaaaactgaaaaagtaataaaaaatgaa	Protospacer
.**   *****.************ **** *

217. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NZ_LR135238 (Enterococcus faecium isolate E7067 plasmid 4) position: , mismatch: 8, identity: 0.75

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
aaacgaaaactgaaaaagtaataaaaaatgaa	Protospacer
.**   *****.************ **** *

218. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NZ_LR135199 (Enterococcus faecium isolate E6055 plasmid 3) position: , mismatch: 8, identity: 0.75

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
aaacgaaaactgaaaaagtaataaaaaatgaa	Protospacer
.**   *****.************ **** *

219. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NZ_LR135261 (Enterococcus faecium isolate E4457 plasmid 4) position: , mismatch: 8, identity: 0.75

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
aaacgaaaactgaaaaagtaataaaaaatgaa	Protospacer
.**   *****.************ **** *

220. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NZ_CP041258 (Enterococcus faecium strain 515 plasmid p27, complete sequence) position: , mismatch: 8, identity: 0.75

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
aaacgaaaactgaaaaagtaataaaaaatgaa	Protospacer
.**   *****.************ **** *

221. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NZ_LR135374 (Enterococcus faecium isolate E8172 plasmid 3) position: , mismatch: 8, identity: 0.75

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
aaacgaaaactgaaaaagtaataaaaaatgaa	Protospacer
.**   *****.************ **** *

222. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NZ_CP040851 (Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence) position: , mismatch: 8, identity: 0.75

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
aaacgaaaactgaaaaagtaataaaaaatgaa	Protospacer
.**   *****.************ **** *

223. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to MN693101 (Marine virus AFVG_25M559, complete genome) position: , mismatch: 8, identity: 0.765

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
taatcttaattataaatcatggaggataatatga	Protospacer
***    ********* **********.***. *

224. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NC_014508 (Enterococcus faecalis plasmid pEF-01, complete sequence) position: , mismatch: 8, identity: 0.733

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
gtgttgtttttaaaaagcaaaaacaacact	Protospacer
 .* * ************** ****** .

225. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP038165 (Enterococcus faecium strain HB2-2 plasmid pHB2-2, complete sequence) position: , mismatch: 8, identity: 0.733

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
gtgttgtttttaaaaagcaaaaacaacact	Protospacer
 .* * ************** ****** .

226. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP038169 (Enterococcus faecium strain SCBC1 plasmid pSCBC1, complete sequence) position: , mismatch: 8, identity: 0.733

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
gtgttgtttttaaaaagcaaaaacaacact	Protospacer
 .* * ************** ****** .

227. spacer 4.42|174905|30|NZ_CP013241|PILER-CR matches to NZ_CP038173 (Enterococcus faecium strain YN2-1 plasmid pYN2-1, complete sequence) position: , mismatch: 8, identity: 0.733

tcgatttttttaaaaagcaataacaactta	CRISPR spacer
gtgttgtttttaaaaagcaaaaacaacact	Protospacer
 .* * ************** ****** .

228. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NC_019763 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.01, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
atcgtttttatttaaaagtaataaataaggtt	Protospacer
 *** **** **************  *    *

229. spacer 4.4|174584|33|NZ_CP013241|CRISPRCasFinder matches to NZ_CP038605 (Salmonella enterica subsp. enterica serovar Senftenberg strain CFIAFB20170120 plasmid pGTAFD2016-MI-0253.1, complete sequence) position: , mismatch: 9, identity: 0.727

ttttttctttaatactttcattagtacccctgg	CRISPR spacer
ttctttctttaatactttcattattaattgaac	Protospacer
**.******************** ** ..  .

230. spacer 4.4|174584|33|NZ_CP013241|CRISPRCasFinder matches to NZ_CP026380 (Salmonella enterica subsp. enterica serovar Senftenberg strain N17 plasmid pN17-509) position: , mismatch: 9, identity: 0.727

ttttttctttaatactttcattagtacccctgg	CRISPR spacer
ttctttctttaatactttcattattaattgaac	Protospacer
**.******************** ** ..  .

231. spacer 4.4|174584|33|NZ_CP013241|CRISPRCasFinder matches to NZ_CP026380 (Salmonella enterica subsp. enterica serovar Senftenberg strain N17 plasmid pN17-509) position: , mismatch: 9, identity: 0.727

ttttttctttaatactttcattagtacccctgg	CRISPR spacer
ttctttctttaatactttcattattaattgaac	Protospacer
**.******************** ** ..  .

232. spacer 4.4|174584|33|NZ_CP013241|CRISPRCasFinder matches to NZ_CP010110 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-4, complete sequence) position: , mismatch: 9, identity: 0.727

ttttttctttaatactttcattagtacccctgg	CRISPR spacer
ttttttctttaatagtttcagtagtcacttgta	Protospacer
************** ***** ****  *..  .

233. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP018750 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence) position: , mismatch: 9, identity: 0.743

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
taaaaataaaaataaaattttttataaatctcttt	Protospacer
.  ******** ***** ************  *

234. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NC_018983 (Borrelia burgdorferi 297 plasmid 297_cp26, complete sequence) position: , mismatch: 9, identity: 0.743

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaaataaaattttttataaatctcttt	Protospacer
   ******** ***** ************  *

235. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NC_017395 (Borreliella burgdorferi JD1 plasmid JD1 cp26, complete sequence) position: , mismatch: 9, identity: 0.743

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaaataaaattttttataaatctcttt	Protospacer
   ******** ***** ************  *

236. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP015797 (Borrelia mayonii strain MN14-1539 plasmid cp26, complete sequence) position: , mismatch: 9, identity: 0.743

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
taaaaataaaaataaaattttttataaatctcttt	Protospacer
.  ******** ***** ************  *

237. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP015781 (Borrelia mayonii strain MN14-1420 plasmid cp26, complete sequence) position: , mismatch: 9, identity: 0.743

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
taaaaataaaaataaaattttttataaatctcttt	Protospacer
.  ******** ***** ************  *

238. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NC_017725 (Borreliella garinii BgVir plasmid cp26, complete sequence) position: , mismatch: 9, identity: 0.743

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
taaaaataaaaataaaactttttataaatctcttt	Protospacer
.  ******** ***** ************  *

239. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP028867 (Borreliella garinii strain 20047 plasmid cp26, complete sequence) position: , mismatch: 9, identity: 0.743

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
taaaaataaaaataaaattttttataaatctcttt	Protospacer
.  ******** ***** ************  *

240. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP018446 (Klebsiella pneumoniae strain Kp_Goe_822917 plasmid pKp_Goe_917-7, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgatttttttaaaaagcaataacaacttat	CRISPR spacer
tcttatttttttaaaaaacaataagaattcac	Protospacer
... *************.****** **.*.*.

241. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP036332 (Klebsiella pneumoniae strain BA28434 plasmid punnamed_3_VBA28434) position: , mismatch: 9, identity: 0.719

ctcgatttttttaaaaagcaataacaacttat	CRISPR spacer
tcttatttttttaaaaaacaataagaattcac	Protospacer
... *************.****** **.*.*.

242. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to CP052271 (Klebsiella pneumoniae strain E16KP0268 plasmid pE16K0268-3, complete sequence) position: , mismatch: 9, identity: 0.719

ctcgatttttttaaaaagcaataacaacttat	CRISPR spacer
tcttatttttttaaaaaacaataagaattcac	Protospacer
... *************.****** **.*.*.

243. spacer 4.9|174904|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP053368 (Klebsiella pneumoniae strain BA2275 plasmid p_unnamed_1_VBA2275) position: , mismatch: 9, identity: 0.719

ctcgatttttttaaaaagcaataacaacttat	CRISPR spacer
tcttatttttttaaaaaacaataagaattcac	Protospacer
... *************.****** **.*.*.

244. spacer 4.18|175457|35|NZ_CP013241|CRISPRCasFinder matches to MN850590 (Escherichia phage moha, complete genome) position: , mismatch: 9, identity: 0.743

ctattttccctttcattaattaaataaaataggtc	CRISPR spacer
ttatttttcctttcatcaattaaatatgcaatgcc	Protospacer
.******.********.********* .  * *.*

245. spacer 4.18|175457|35|NZ_CP013241|CRISPRCasFinder matches to MK524178 (Escherichia phage PHB12, complete genome) position: , mismatch: 9, identity: 0.743

ctattttccctttcattaattaaataaaataggtc	CRISPR spacer
ttatttttcctttcatcaattaaatatgcaacgcc	Protospacer
.******.********.********* .  * *.*

246. spacer 4.18|175457|35|NZ_CP013241|CRISPRCasFinder matches to MH243438 (Escherichia phage vB_EcoM_NBG1, complete genome) position: , mismatch: 9, identity: 0.743

ctattttccctttcattaattaaataaaataggtc	CRISPR spacer
ttatttttcctttcatcaattaaatatgcaatgcc	Protospacer
.******.********.********* .  * *.*

247. spacer 4.18|175457|35|NZ_CP013241|CRISPRCasFinder matches to MT782071 (Escherichia phage JN02, complete genome) position: , mismatch: 9, identity: 0.743

ctattttccctttcattaattaaataaaataggtc	CRISPR spacer
ttatttttcctttcatcaattaaatatgcaacgcc	Protospacer
.******.********.********* .  * *.*

248. spacer 4.18|175457|35|NZ_CP013241|CRISPRCasFinder matches to MK373782 (Escherichia phage vB_EcoM_KAW3E185, complete genome) position: , mismatch: 9, identity: 0.743

ctattttccctttcattaattaaataaaataggtc	CRISPR spacer
ttatttttcctttcatcaattaaatatgcaatgcc	Protospacer
.******.********.********* .  * *.*

249. spacer 4.22|174445|46|NZ_CP013241|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 9, identity: 0.804

gaagttaaatttgttttttatattttctatatcctatatattattg	CRISPR spacer
tatgatcatattgttttttatatcttctatatcccatatattattt	Protospacer
 * * * *  *************.**********.**********

250. spacer 4.22|174445|46|NZ_CP013241|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 9, identity: 0.804

gaagttaaatttgttttttatattttctatatcctatatattattg	CRISPR spacer
tatgatcatattgttttttatatcttctatatcccatatattattt	Protospacer
 * * * *  *************.**********.**********

251. spacer 4.22|174445|46|NZ_CP013241|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 9, identity: 0.804

gaagttaaatttgttttttatattttctatatcctatatattattg	CRISPR spacer
tatgatcatattgttttttatatcttctatatcccatatattattt	Protospacer
 * * * *  *************.**********.**********

252. spacer 4.22|174445|46|NZ_CP013241|CRT matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 9, identity: 0.804

gaagttaaatttgttttttatattttctatatcctatatattattg	CRISPR spacer
tatgatcatattgttttttatatcttctatatcccatatattattt	Protospacer
 * * * *  *************.**********.**********

253. spacer 4.22|174445|46|NZ_CP013241|CRT matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 9, identity: 0.804

gaagttaaatttgttttttatattttctatatcctatatattattg	CRISPR spacer
tatgatcatattgttttttatatcttctatatcccatatattattt	Protospacer
 * * * *  *************.**********.**********

254. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NC_013793 (Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence) position: , mismatch: 9, identity: 0.719

gaaattaaacaaataatagtacat---agttgtac	CRISPR spacer
caaataaaacaaataacagtacatttaactca---	Protospacer
 **** **********.*******   * *..

255. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP023491 (Lactobacillus plantarum strain NCIMB 700965 plasmid unamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
atactaaatatatcaaatatactaaatatattta	Protospacer
 *..* . . *** *** ****************

256. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP014325 (Borrelia anserina Es isolate UTHSCSA plasmid lpA89, complete sequence) position: , mismatch: 10, identity: 0.706

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
attacagacttagaaaagatactaaatatattag	Protospacer
 *  . * **** ****.************** .

257. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP026506 (Lactobacillus plantarum strain NCIMB700965.EF.A plasmid punamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
atactaaatatatcaaatatactaaatatattta	Protospacer
 *..* . . *** *** ****************

258. spacer 3.2|173824|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP012296 (Pediococcus damnosus strain TMW 2.1536 plasmid pL21536-2, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgattttttttaaaagtaataacaacctat	CRISPR spacer
accgatcttttttaaaagtaaaaactgtgatt	Protospacer
 .****.************** *** ..   *

259. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NZ_LR215000 (Mycoplasma conjunctivae strain NCTC10147 plasmid 4) position: , mismatch: 10, identity: 0.73

tttgttttttatattttctatatcctatatattattg	CRISPR spacer
tgggacttttatattttctatatctgatatatttaat	Protospacer
*  * .******************. *******

260. spacer 4.2|174454|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 10, identity: 0.73

tttgttttttatattttctatatcctatatattattg	CRISPR spacer
tgattgtttaataatttctatatcctatatatcttgt	Protospacer
*   * *** *** ******************. *

261. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013332 (Fusobacterium hwasookii ChDC F174 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.714

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
ctttaataaaattaaaaatttttatatcattttcc	Protospacer
*** *******.**************   .  *

262. spacer 4.12|175094|37|NZ_CP013241|CRISPRCasFinder matches to KT070867 (Bacillus phage PBC2, complete genome) position: , mismatch: 10, identity: 0.73

cttatatttatgcatttgtaaaacctccgttcgtttg	CRISPR spacer
gtcaaatttattcatttgtaaaacctccattaaatca	Protospacer
 *.* ****** ****************.** . *..

263. spacer 4.15|175264|32|NZ_CP013241|CRISPRCasFinder matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 10, identity: 0.688

ctagttattctttttgttttttacacacgcta	CRISPR spacer
ctaattattcttttagttttttaattttattt	Protospacer
***.********** ********  . ...*

264. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP018750 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.688

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaaattaaacaaaaaatagaacaaataaaaga	Protospacer
************* ***** *** *   . .

265. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NZ_CP028867 (Borreliella garinii strain 20047 plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.688

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaaattaaacaaaaaatagaacaaataaaaga	Protospacer
************* ***** *** *   . .

266. spacer 4.34|175204|32|NZ_CP013241|CRT matches to NC_017725 (Borreliella garinii BgVir plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.688

gaaattaaacaaataatagtacatagttgtac	CRISPR spacer
gaaattaaacaaaaaatagaacaaataaaaga	Protospacer
************* ***** *** *   . .

267. spacer 4.39|175511|32|NZ_CP013241|CRT matches to MN693885 (Marine virus AFVG_250M83, complete genome) position: , mismatch: 10, identity: 0.688

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
ttttttaaactaaaaaataaataataaagatg	Protospacer
    *************  *********

268. spacer 4.39|175511|32|NZ_CP013241|CRT matches to NC_007389 (Spiroplasma citri pSci3 plasmid) position: , mismatch: 10, identity: 0.688

gaagttaaactaaaaaagtaataataaattat	CRISPR spacer
atatataaaataaaaaaataataataaaaata	Protospacer
. *  **** *******.**********

269. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to MN693185 (Marine virus AFVG_25M398, complete genome) position: , mismatch: 10, identity: 0.706

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
tggtcttaattataaatcatggaggataatatga	Protospacer
*..    ********* **********.***. *

270. spacer 4.41|174841|34|NZ_CP013241|PILER-CR matches to MN693267 (Marine virus AFVG_25M289, complete genome) position: , mismatch: 10, identity: 0.706

taagaaaaattataaaacatggaggatgatacta	CRISPR spacer
tggtcttaattataaatcatggaggataatatga	Protospacer
*..    ********* **********.***. *

271. spacer 5.5|176179|37|NZ_CP013241|CRISPRCasFinder matches to NZ_CP048432 (Staphylococcus aureus strain SA1428 plasmid p1) position: , mismatch: 10, identity: 0.73

cttattttttcttcattaaacaacctcctcattaagg	CRISPR spacer
tgtattttttcttctttaaacaagctcctttaaaata	Protospacer
. ************ ******** *****.   ** .

272. spacer 6.2|233316|37|NZ_CP013241|PILER-CR matches to MT774387 (CrAssphage cr111_1, complete genome) position: , mismatch: 10, identity: 0.73

actttatcatttaccatattaactacatgaatataat	CRISPR spacer
cctagaggattcaccatatgaactacatgaatatcca	Protospacer
 **  *  ***.******* **************

273. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NC_006872 (Clostridium perfringens plasmid pBCNF5603 DNA, complete sequence) position: , mismatch: 11, identity: 0.676

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
aaagtaaaattaaaataaatactaaatatatttt	Protospacer
  . * .  *** ** *****************

274. spacer 2.1|122172|34|NZ_CP013241|CRISPRCasFinder matches to NZ_CP013044 (Clostridium perfringens strain JP55 plasmid pJFP55J, complete sequence) position: , mismatch: 11, identity: 0.676

ttgtttgtcttataaaaaatactaaatatattta	CRISPR spacer
aaagtaaaattaaaataaatactaaatatatttt	Protospacer
  . * .  *** ** *****************

275. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_LR135249 (Enterococcus faecium isolate E6988 plasmid 7) position: , mismatch: 11, identity: 0.686

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaattaaaaatttttctaaaaaacaaa	Protospacer
   ********.*********** ****  .  *.

276. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_LR135240 (Enterococcus faecium isolate E7067 plasmid 6) position: , mismatch: 11, identity: 0.686

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaattaaaaatttttctaaaaaacaaa	Protospacer
   ********.*********** ****  .  *.

277. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_LR135224 (Enterococcus faecium isolate E7040 plasmid 6) position: , mismatch: 11, identity: 0.686

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaattaaaaatttttctaaaaaacaaa	Protospacer
   ********.*********** ****  .  *.

278. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_LR135349 (Enterococcus faecium isolate E8202 plasmid 6) position: , mismatch: 11, identity: 0.686

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaattaaaaatttttctaaaaaacaaa	Protospacer
   ********.*********** ****  .  *.

279. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_LR135361 (Enterococcus faecium isolate E7948 plasmid 5) position: , mismatch: 11, identity: 0.686

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaattaaaaatttttctaaaaaacaaa	Protospacer
   ********.*********** ****  .  *.

280. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_CP044278 (Enterococcus faecium strain V2937 plasmid pHVH-V2937-4, complete sequence) position: , mismatch: 11, identity: 0.686

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaattaaaaatttttctaaaaaacaaa	Protospacer
   ********.*********** ****  .  *.

281. spacer 4.6|174711|35|NZ_CP013241|CRISPRCasFinder matches to NZ_KY595969 (Enterococcus faecium strain VREfm87 plasmid pMIS005, complete sequence) position: , mismatch: 11, identity: 0.686

cttaaataaaactaaaaatttttataaatcgatag	CRISPR spacer
aaaaaataaaattaaaaatttttctaaaaaacaaa	Protospacer
   ********.*********** ****  .  *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 15923

Anoxybacillus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172819771.1\|1594_1732_+	hypothetical protein	NA	NA	NA	NA
WP_096043121.1\|1783_2719_+	hypothetical protein	NA	NA	NA	NA
WP_096043122.1\|3263_3638_+	hypothetical protein	NA	NA	NA	NA
WP_172819772.1\|3816_3993_+	hypothetical protein	NA	NA	NA	NA
WP_096043123.1\|4010_4556_+	hypothetical protein	NA	NA	NA	NA
WP_096043124.1\|4732_5425_+	hypothetical protein	NA	NA	NA	NA
WP_096043125.1\|5500_6676_+	hypothetical protein	NA	NA	NA	NA
WP_096043126.1\|6668_8951_+	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_072587034.1\|9353_9656_+	calcium-binding protein	NA	NA	NA	NA
WP_072587035.1\|9828_10449_+	thermonuclease family protein	A0A2P1JU10	Anoxybacillus_phage	4.0e-42	56.0
WP_045897719.1\|10865_11177_+	hypothetical protein	NA	NA	NA	NA
WP_096043127.1\|11173_13267_+	ATP-dependent helicase	A7KV33	Bacillus_phage	7.8e-37	25.3
WP_096043128.1\|13432_14167_+	transcriptional regulator	NA	NA	NA	NA
WP_096043129.1\|14609_15923_+	HNH endonuclease	Q331Y3	Clostridium_botulinum_C_phage	1.2e-160	65.2

DBSCAN-SWA_2

21276 : 28010

Aeromonas_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172819773.1\|21276_21717_+	hypothetical protein	Q76YT6	Aeromonas_virus	7.4e-14	56.1
WP_155119566.1\|21756_21930_+	hypothetical protein	NA	NA	NA	NA
WP_012291524.1\|21961_22321_+	hypothetical protein	NA	NA	NA	NA
WP_003405269.1\|22923_24747_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.4e-88	37.4
WP_155119570.1\|24774_25017_+	hypothetical protein	NA	NA	NA	NA
WP_167366120.1\|25061_25217_+	hypothetical protein	NA	NA	NA	NA
WP_072587058.1\|25276_25924_+	hypothetical protein	NA	NA	NA	NA
WP_045898841.1\|25948_26161_+	hypothetical protein	NA	NA	NA	NA
WP_072587059.1\|26293_26494_+	hypothetical protein	NA	NA	NA	NA
WP_040109960.1\|26468_27068_+	hypothetical protein	NA	NA	NA	NA
WP_096043133.1\|27119_28010_+	sigma-70 family RNA polymerase sigma factor	A0A0E3D9C3	Bacillus_phage	4.3e-13	33.2

DBSCAN-SWA_3

31871 : 41844

Bacillus_virus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096043134.1\|31871_32987_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	D2XQ03	Bacillus_virus	8.1e-142	65.9
WP_096043135.1\|33363_35706_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	3.0e-37	29.0
WP_072587066.1\|35850_36225_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_096043136.1\|36243_36666_+	DNA topoisomerase III	NA	NA	NA	NA
WP_030032212.1\|36796_37174_+	hypothetical protein	E7DN80	Pneumococcus_phage	3.5e-12	47.1
WP_096043137.1\|37190_39125_+	ATPase	A0A0C5AFF4	Paenibacillus_phage	7.2e-13	25.0
WP_096043138.1\|39275_39854_+	hypothetical protein	NA	NA	NA	NA
WP_096043139.1\|39900_41844_+	PcfJ domain-containing protein	A0A2H4J308	uncultured_Caudovirales_phage	1.3e-17	44.2

DBSCAN-SWA_4

45136 : 51241

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012300921.1\|45136_46999_+	ATP-binding protein	G3MBM1	Bacillus_virus	2.0e-15	26.0
WP_096043141.1\|47216_47618_+	hypothetical protein	NA	NA	NA	NA
WP_096043142.1\|47690_49454_+	hypothetical protein	NA	NA	NA	NA
WP_096043187.1\|49489_51241_+	C40 family peptidase	A0A0A8WF62	Clostridium_phage	6.5e-29	48.2

DBSCAN-SWA_5

58567 : 58834

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_030032175.1\|58567_58834_+	sporulation transcriptional regulator SpoIIID	M9Q261	Clostridium_phage	3.0e-10	42.7

DBSCAN-SWA_6

62914 : 63967

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012720244.1\|62914_63967_+	ParM/StbA family protein	G3MAP7	Bacillus_virus	8.7e-21	23.9

DBSCAN-SWA_7

74226 : 76363

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072587082.1\|74226_75045_+	ATP-binding protein	A6XMI1	Bacillus_virus	2.5e-23	30.4
WP_080490442.1\|75034_76363_+	replicative DNA helicase	I6S783	Marinomonas_phage	2.1e-59	35.9

DBSCAN-SWA_8

88881 : 100348

Bacillus_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072587086.1\|88881_90606_+\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	2.1e-88	40.2
WP_072587087.1\|90964_91771_-	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA
WP_072587088.1\|92130_92694_+\|protease	spore protease YyaC	G3M9W0	Bacillus_virus	5.0e-23	45.3
WP_021107212.1\|92961_93825_+	prohibitin family protein	A0A172JI70	Bacillus_phage	2.1e-33	30.4
WP_096043149.1\|94061_95285_+	sigma-70 family RNA polymerase sigma factor	A0A0Y0AU18	Bacillus_phage	6.1e-26	34.5
WP_072587090.1\|95456_95912_+	hypothetical protein	NA	NA	NA	NA
WP_045896493.1\|96503_96728_+	hypothetical protein	NA	NA	NA	NA
WP_052705794.1\|96795_97509_+	hypothetical protein	A0A2H4J8I2	uncultured_Caudovirales_phage	1.2e-26	36.9
WP_045896492.1\|97540_97897_+	hypothetical protein	NA	NA	NA	NA
WP_045896491.1\|97929_98334_+	hypothetical protein	NA	NA	NA	NA
WP_072587091.1\|98415_98805_+	hypothetical protein	NA	NA	NA	NA
WP_045896490.1\|99322_100348_+	nucleoid-associated protein	J9QE81	Clostridium_phage	9.7e-33	28.7

DBSCAN-SWA_9

107623 : 108292

Clostridioides_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045897924.1\|107623_108292_+	serine/threonine protein phosphatase	A0A2R2ZH50	Clostridioides_phage	1.7e-62	54.1

DBSCAN-SWA_10

117689 : 119648

Paenibacillus_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096043152.1\|117689_118568_-\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.1e-74	60.3
WP_096043153.1\|118564_119242_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	2.2e-49	48.4
WP_045898418.1\|119402_119648_+	sporulation transcriptional regulator SpoIIID	M9Q261	Clostridium_phage	7.9e-18	58.7

DBSCAN-SWA_11

125368 : 146504

Clostridium_botulinum_D_phage(27.27%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072587107.1\|125368_127249_-	botulinum neurotoxin hemagglutinin HA70 subunit	Q786X9	Clostridium_botulinum_D_phage	6.6e-237	67.5
WP_003404194.1\|127262_127703_-	hemagglutinin component HA17	Q786Y1	Clostridium_botulinum_D_phage	2.3e-47	63.7
WP_072587108.1\|127765_128650_-	ricin-type beta-trefoil lectin domain protein	Q38196	Clostridium_botulinum_phage	3.1e-35	34.6
WP_003404193.1\|128875_129412_+	botulinum neurotoxin transcription-activating sigma factor BotR	Q9ZWV5	Clostridium_botulinum_D_phage	5.6e-40	52.8
WP_072587328.1\|129573_133167_+	non-toxic nonhemagglutinin NTNH	Q332E1	Clostridium_botulinum_C_phage	0.0e+00	69.2
WP_072587109.1\|133192_137068_+	botulinum neurotoxin type B	Q332E0	Clostridium_botulinum_C_phage	5.2e-188	33.4
WP_003362424.1\|138752_138965_+	hypothetical protein	NA	NA	NA	NA
WP_003404190.1\|139000_139168_+	hypothetical protein	NA	NA	NA	NA
WP_045899006.1\|139184_139370_+	hypothetical protein	NA	NA	NA	NA
WP_003404186.1\|139430_139787_+	hypothetical protein	NA	NA	NA	NA
WP_072587110.1\|139858_140317_+	SAM-dependent methyltransferase	A0A0E3Y6D6	Fusobacterium_phage	6.2e-64	71.3
WP_012291535.1\|140347_141112_+	site-specific DNA-methyltransferase	A0A088C4U4	Shewanella_sp._phage	8.5e-58	50.4
WP_003404181.1\|141169_141790_+	DUF5052 family protein	A0A2P0ZKZ7	Lactobacillus_phage	5.3e-42	44.5
WP_003404179.1\|141800_141977_+	hypothetical protein	NA	NA	NA	NA
WP_045899007.1\|142004_142295_+	hypothetical protein	NA	NA	NA	NA
WP_072586973.1\|142359_142545_+	hypothetical protein	NA	NA	NA	NA
WP_072586975.1\|142881_143790_+	hypothetical protein	NA	NA	NA	NA
WP_003404170.1\|143938_144310_+	hypothetical protein	A8ASN9	Listeria_phage	8.9e-13	34.4
WP_003404167.1\|144395_145211_+	hypothetical protein	NA	NA	NA	NA
WP_003404165.1\|145480_145645_+	hypothetical protein	NA	NA	NA	NA
WP_003404163.1\|145649_146504_+	DNA cytosine methyltransferase	A0A142F1A1	Bacillus_phage	1.1e-24	27.9

DBSCAN-SWA_12

155199 : 158057

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072586985.1\|155199_155793_+	AAA family ATPase	A0A0E3X9J6	Bacillus_phage	4.8e-16	34.1
WP_072586986.1\|156803_158057_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	G3MB42	Bacillus_virus	1.3e-44	36.2

DBSCAN-SWA_13

161248 : 171413

Bacillus_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045896620.1\|161248_161794_+	DUF1273 family protein	A0A1P8CWY2	Bacillus_phage	4.3e-32	45.1
WP_072586990.1\|161981_162593_+	hypothetical protein	NA	NA	NA	NA
WP_012300928.1\|162724_163285_+	hypothetical protein	NA	NA	NA	NA
WP_072586991.1\|163303_164287_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_167366114.1\|164336_164480_+	hypothetical protein	NA	NA	NA	NA
WP_072586992.1\|164787_166203_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	2.6e-52	42.9
WP_045896618.1\|166330_166921_-	HD domain-containing protein	NA	NA	NA	NA
WP_072586993.1\|167052_167508_+	prepilin peptidase	NA	NA	NA	NA
WP_172819776.1\|167597_167738_+	hypothetical protein	NA	NA	NA	NA
WP_072586994.1\|167759_168152_+	LemA family protein	NA	NA	NA	NA
WP_045896596.1\|168177_168363_-	hypothetical protein	NA	NA	NA	NA
WP_072586995.1\|168443_169472_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	1.8e-26	51.4
WP_003362366.1\|169630_170773_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0IJS6	Lactobacillus_phage	7.1e-85	45.3
WP_045896601.1\|170966_171413_+	single-stranded DNA-binding protein	A0A290GHL8	Caldibacillus_phage	2.3e-31	52.3

DBSCAN-SWA_14

185091 : 186036

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072587004.1\|185091_186036_+	SPFH/Band 7/PHB domain protein	M1PGF9	Moumouvirus	3.2e-22	34.1

DBSCAN-SWA_15

190754 : 192227

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072587009.1\|190754_192227_+	phosphoadenosine phosphosulfate reductase family protein	S4TTT6	Salmonella_phage	2.6e-07	25.8

DBSCAN-SWA_16

195297 : 200851

Deep-sea_thermophilic_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096043163.1\|195297_197700_-	ATP-binding protein	E5DV71	Deep-sea_thermophilic_phage	2.6e-76	29.5
WP_072587013.1\|197696_198098_-	bacitracin ABC transporter ATP-binding protein	A0A218KCI4	Bacillus_phage	3.1e-11	41.6
WP_096043164.1\|198942_199272_+	hypothetical protein	NA	NA	NA	NA
WP_096043165.1\|199537_200851_+	HNH endonuclease	Q331Y3	Clostridium_botulinum_C_phage	7.7e-160	65.2

DBSCAN-SWA_17

203907 : 205374

Yersinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096043169.1\|203907_205374_+	hypothetical protein	A0A2C9CXG6	Yersinia_phage	3.6e-41	37.1

DBSCAN-SWA_18

218466 : 227614

Staphylococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003362755.1\|218466_219117_-	single-stranded DNA-binding protein	A0A0H3U4B5	Staphylococcus_phage	3.0e-11	42.3
WP_096043172.1\|219272_219962_+	hypothetical protein	NA	NA	NA	NA
WP_096043173.1\|220061_221159_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q332I1	Clostridium_botulinum_C_phage	2.6e-145	75.8
WP_172819777.1\|221624_221909_+	hypothetical protein	NA	NA	NA	NA
WP_096043175.1\|222052_222742_+	Fic family protein	NA	NA	NA	NA
WP_096043176.1\|222833_223442_+	hypothetical protein	NA	NA	NA	NA
WP_096043177.1\|223766_224168_+	hypothetical protein	J9PV82	Bacillus_phage	5.8e-26	44.5
WP_003405269.1\|225790_227614_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.4e-88	37.4

DBSCAN-SWA_19

231441 : 232890

Bacillus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096043183.1\|231441_232890_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A142F1Q5	Bacillus_phage	3.4e-39	36.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP013242

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013242_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013242_1

559944-560044

Orphan

Consensus_repeat	Method
GAACCCAAATCTACGATTTGGCGTGAGTCGCTTACTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013242_1

>merge|NZ_CP013242|1|559944-560044|CRISPRCasFinder
GAACCCAAATCTACGATTTGGCGTGAGTCGCTTACTCCTATGGAAATAGGAGTTTCGTATAAAGGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTC

>NZ_CP013242|1|1|559944-560044|CRISPRCasFinder
GAACCCAAATCTACGATTTGGCGTGAGTCGCTTACTC	CTATGGAAATAGGAGTTTCGTATAAAG
GAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013242.1\|WP_030035812.1\|545291_545567_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|376348
NZ_CP013242.1\|WP_096043497.1\|558948_559938_+\|ornithine-cyclodeaminase-family-protein	unknown	unknown	gnl\|CDD\|236313
NZ_CP013242.1\|WP_096043492.1\|549592_553354_+\|phosphoribosylformylglycinamidine-synthase	unknown	unknown	gnl\|CDD\|130916
NZ_CP013242.1\|WP_096043490.1\|545571_548049_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376527
NZ_CP013242.1\|WP_096043499.1\|562070_562979_+\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
NZ_CP013242.1\|WP_096043493.1\|553710_554187_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP013242.1\|WP_045897877.1\|560185_560770_-\|sulfurtransferase-like-selenium-metabolism-protein-YedF	unknown	unknown	gnl\|CDD\|274630
NZ_CP013242.1\|WP_045897761.1\|567101_567530_+\|Fe-S-cluster-assembly-scaffold-protein-NifU	unknown	unknown	gnl\|CDD\|132460
NZ_CP013242.1\|WP_096043501.1\|564055_565303_+\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP013242.1\|WP_096043494.1\|554326_554980_-\|DUF4397-domain-containing-protein	unknown	unknown	gnl\|CDD\|379570
NZ_CP013242.1\|WP_096043491.1\|548045_549395_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP013242.1\|WP_096043496.1\|557459_558827_+\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040
NZ_CP013242.1\|WP_003484625.1\|565467_565914_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP013242.1\|WP_096043502.1\|565906_567100_+\|cysteine-desulfurase-NifS	unknown	unknown	gnl\|CDD\|132443
NZ_CP013242.1\|WP_096043504.1\|568211_569240_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP013242.1\|WP_096043500.1\|563112_563880_+\|histidinol-phosphate-phosphatase	unknown	unknown	gnl\|CDD\|235519
NZ_CP013242.1\|WP_096043498.1\|561097_561964_+\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257
NZ_CP013242.1\|WP_096043503.1\|567710_568199_+\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|226398
NZ_CP013242.1\|WP_096043489.1\|543747_545286_+\|acyl--CoA-ligase	unknown	unknown	gnl\|CDD\|223395
NZ_CP013242.1\|WP_096043495.1\|555358_556693_+\|sodium:alanine-symporter-family-protein	unknown	unknown	gnl\|CDD\|224040

Protein	Function_ID	Function_description	E-value
NZ_CP013242.1\|WP_030035812.1\|545291_545567_+\|acyl-carrier-protein	gnl\|CDD\|376348	pfam00550, PP-binding, Phosphopantetheine attachment site. A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of the anguibactin system regulator AngR has the attachment serine replaced by an alanine.	4.62094e-07
NZ_CP013242.1\|WP_096043497.1\|558948_559938_+\|ornithine-cyclodeaminase-family-protein	gnl\|CDD\|236313	PRK08618, PRK08618, ornithine cyclodeaminase family protein.	5.11648e-177
NZ_CP013242.1\|WP_096043492.1\|549592_553354_+\|phosphoribosylformylglycinamidine-synthase	gnl\|CDD\|130916	TIGR01857, FGAM-synthase, phosphoribosylformylglycinamidine synthase, clade II. This model represents a single-molecule form of phosphoribosylformylglycinamidine synthase, also called FGAM synthase, an enzyme of purine de novo biosynthesis. This model represents a second clade of these enzymes found in Clostridia, Bifidobacteria and Streptococcus species. This enzyme performs the fourth step in IMP biosynthesis (the precursor of all purines) from PRPP. [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis].	0
NZ_CP013242.1\|WP_096043490.1\|545571_548049_+\|hypothetical-protein	gnl\|CDD\|376527	pfam01326, PPDK_N, Pyruvate phosphate dikinase, PEP/pyruvate binding domain. This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP).	2.03805e-129
NZ_CP013242.1\|WP_096043499.1\|562070_562979_+\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	5.81334e-44
NZ_CP013242.1\|WP_096043493.1\|553710_554187_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	1.08544e-09
NZ_CP013242.1\|WP_045897877.1\|560185_560770_-\|sulfurtransferase-like-selenium-metabolism-protein-YedF	gnl\|CDD\|274630	TIGR03527, selenium_YedF, selenium metabolism protein YedF. Members of this protein family are about 200 amino acids in size, and include the uncharacterized YedF protein of Escherichia coli. This family shares an N-terminal domain, modeled by pfam01206, with the sulfurtransferase TusA (also called SirA). The C-terminal domain includes a typical redox-active disulfide motif, CGXC. This protein family found only among those genomes that also carry the selenium donor protein SelD, and its connection to selenium metabolism is indicated by the method of partial phylogenetic profiling vs. SelD. Its gene typically is found next to selD. Members of this family are found even when selenocysteine and selenouridine biosynthesis pathways are, except for SelD, completely absent, as in Enterococcus faecalis. Its role in selenium metabolism is unclear, but may include either detoxification or a role in labile selenoprotein biosynthesis.	7.27781e-92
NZ_CP013242.1\|WP_045897761.1\|567101_567530_+\|Fe-S-cluster-assembly-scaffold-protein-NifU	gnl\|CDD\|132460	TIGR03419, NifU_clost, FeS cluster assembly scaffold protein NifU, Clostridium type. NifU and NifS form a pair of iron-sulfur (FeS) cluster biosynthesis proteins much simpler than the ISC and SUF systems. Members of this protein family are a distinct group of NifU-like proteins, found always to a NifS-like protein and restricted to species that lack a SUF system. Typically, NIF systems service a smaller number of FeS-containing proteins than do ISC or SUF. Members of this particular branch typically are found, almost half the time, near the mnmA gene, involved in the carboxymethylaminomethyl modification of U34 in some tRNAs (see GenProp0704). While other NifU proteins are associated with nitrogen fixation, this family is not. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	3.4256e-85
NZ_CP013242.1\|WP_096043501.1\|564055_565303_+\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP013242.1\|WP_096043494.1\|554326_554980_-\|DUF4397-domain-containing-protein	gnl\|CDD\|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	8.05305e-35
NZ_CP013242.1\|WP_096043491.1\|548045_549395_+\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	1.04465e-109
NZ_CP013242.1\|WP_096043496.1\|557459_558827_+\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0
NZ_CP013242.1\|WP_003484625.1\|565467_565914_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	2.45334e-53
NZ_CP013242.1\|WP_096043502.1\|565906_567100_+\|cysteine-desulfurase-NifS	gnl\|CDD\|132443	TIGR03402, Cysteine_desulfurase_NifS, cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.	0
NZ_CP013242.1\|WP_096043504.1\|568211_569240_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.62964e-46
NZ_CP013242.1\|WP_096043500.1\|563112_563880_+\|histidinol-phosphate-phosphatase	gnl\|CDD\|235519	PRK05588, PRK05588, histidinol phosphate phosphatase.	4.09934e-136
NZ_CP013242.1\|WP_096043498.1\|561097_561964_+\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	1.62887e-112
NZ_CP013242.1\|WP_096043503.1\|567710_568199_+\|PRC-barrel-domain-containing-protein	gnl\|CDD\|226398	COG3881, COG3881, PRC-barrel domain containing protein [General function prediction only].	4.76956e-15
NZ_CP013242.1\|WP_096043489.1\|543747_545286_+\|acyl--CoA-ligase	gnl\|CDD\|223395	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	7.61228e-31
NZ_CP013242.1\|WP_096043495.1\|555358_556693_+\|sodium:alanine-symporter-family-protein	gnl\|CDD\|224040	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism].	0

>NZ_CP013242.1|WP_096043497.1|558948_559938_+|ornithine-cyclodeaminase-family-protein
MLILTAEDIKKVFTMRDAIEADKEAFRLYSTNKAEVPLRTNINIPKYKGTSLFMPGYVEELDTAGIKIVSVFPENVKLGKPAVPAQMILLDGKTGEVSAIMDGTYLTQLRTGASAGAATDILAKEDSKIGALIGTGGQALCQLEALLAARNLEIVKVYSRNLQNVKAFVEEAKEKLSHYGAEIIGVTSSDEAIEDADVITVVTTATSPVFDGKKVKKGAHINGVGSYMKHMQEIDEYIISKADKIYLDSKDAVLSEAGDFIIPLEKGVIKEDIVTGELGQVISKTIEGRKSESEITLFKSVGIAVQDVVTAYKIYEKALKNKVGKEIEI
>NZ_CP013242.1|WP_096043496.1|557459_558827_+|sodium:alanine-symporter-family-protein
MEFLLNVFENINNVLWTYILMFFLCGAGIFFTFKLGFVQVKKFKAMFKQVFTKSDNDDGISSFQALATAVAAQVGTGILAGSATAIAAGGPGAIFWMWISSFFGMGTIFAEAVLAQKYKIKDEDGEVLGGPAYYIRDGLGSKKLAKFFAFAMMVSACLTGDMVQSNSISISMNKAYNIPTLITGIVLVVLTAMIVIGGIQRIASVTEKLIPIMGALFILGSLIIIFKNYNNIIPALKMIFVGAFNPRAATGGLIGASVREAMRYGVSRGLFSNEAGMGSTPHAHAIANVKHPVQQGLVAMFGVFIDIFVILNCTAFVILTSGALDGKTTGIELTQKAFVNGFGGFGNSFVAISLFFFAFSTMIGWYFFGALNVKFIFGKKGMKPYTVIYLISLILGTVLDVPLVWQLADTFNGLMVIPNLIALIALAKLVQKELKDYNENFLLKQAVADRKASKL
>NZ_CP013242.1|WP_096043495.1|555358_556693_+|sodium:alanine-symporter-family-protein
MDLLKIVEGFNNILWSYILMFFLFGAGIFFTFNLKFVQVRKFKAMFKQVFSKNQNKDSGITSFQALSTAVAAQVGTGNLAGAATAIAAGGPGAIFWMWVSAFFGMGTIFSEAILAQKYKVKKGSGEVLGGPAYYIRDGFGSKKLAAFFAFSMMVSACLTGDMVQSNSIGISINKAFGVPNIVVGIIVAILTALIVLGGIQRIASVTEKLVPIMALFFIIGSLIIIGINYDNIGPAFKMIFVGAFNPKAATGGLIGVSVREAMRYGISRGLFSNEAGMGSTPHAHAVADVKHPAQQGLVAMFGLFIDTFVVLTCTAMVILTTGALDGKTTGIELTQQAFINGFGHFGNIFVAISLFFFAFSTIIGWYFFGLLNVKFIFGDKGTKPYVVLFLVALVVGTVLDVPLVWQLADTFNGFMVIPNLIALIALAKLVKKELKDYENNFSIK
>NZ_CP013242.1|WP_096043494.1|554326_554980_-|DUF4397-domain-containing-protein
MFDLPCFHENKVKFRKSDEKSHVRILHASPDAPAVDIYINDNLIYKGLSYKGFTEYMPLTSTIYNIKLFPTGKKDVPLINKFFFIPPNSIYTIAATGLLKDIALFPILDKKLDNKDPNKAYVRFVHLSPNAPKLDFYMNSKEIFNNIGYKNITDYSPVDPKNYTITLKLANTENTVLTSPNANLKANKYYTVYAVGLANGKPSLQVLIPLDGNSYIK
>NZ_CP013242.1|WP_096043493.1|553710_554187_+|copper-amine-oxidase-N-terminal-domain-containing-protein
MKILLYSFIGLLSLSLVDLLLNAAKFMYHHKYGKVVFKINKNKYKKSKVSKKEFLMTVSPFKDENNNVYLPLKYVADSLGIKLYNDDEYSIIIKVMDKNIKANEEVIFIENSSTNLNRKIDKNIRIRNNELMLPQSYIKDIFEVNIEVDNKTGEVILK
>NZ_CP013242.1|WP_096043492.1|549592_553354_+|phosphoribosylformylglycinamidine-synthase
MGNEIKTLFVEKKPQFRVESKKILDNFKLSLNMKNIKDVRILNKYNISGISDEEYNLAKYTIFSEKTVDELYEEKFSYDSEDKIFSVEYLPGQYDQRADSAAQCIEILTQKQGAIVKYSKVFVIKGNITKEELEKIKEYCINKVDSREAQLEKPNSLVDVQLEVQSVEVLDGFIDLSEKELKEFLQDRNLAMTFEDLKFCREYFKNEEKRNPTITEIKVIDTYWSDHCRHTTFMTEIEDIKIEEGLYSNAIKETYEEYKNIKGFVHAKEKATCLMDIATIAAKELRKKGLMEDLDVSPEINACSIVVDAEIDGKTEKWLVMFKNETHNHPTEIEPFGGAATCVGGAIRDPLSGRVYVYQAMRVTGSADPRQNIEDTLEGKLPQKKITTEAAHGYSSYGNQIGLATGQVSEIYDEGYMAKRMEIGAVIGAAPMENVIRKEPKPSDIVILLGGRTGRDGIGGATGSSKKHTESSIENCGSEVQKGNAPTERKIQRLFRNKEVSTMIKRCNDFGAGGVSVAIGELTEGLYIDLNKVPKKYEGLDGTELAISESQERMAVVISKEDRERFIKFSEEENLEATVVAEVKEEKRLEMLWKDNIIVDLDREFLNTNGVVQKTKAYINTPEKESYFQKIVIGSKENIKDKWIENIKDLNVCSEKGLVEMFDSTVGAGTVIMPLGGKYQKTPQEGMAAKLPVSEGDTTTATVMTYGFNPKISKWSPFHGAMYAVIESVTKAVAMGIDYKKIRLTFQEYFEKLENKEEKWGKPLAALLGALKAQREFSIAAIGGKDSMSGTFKDMNVPPTLVSFAVGVTNVNRIISSEFKEVGSVILYIKAKRNKEEIPDFNILKENYEKVYEAIGTGNVLATSTIKFGGISEAISKMCFGNNIGAKLKNLEKEELFSRDYGSIILEVNKNFDLNLLKEIDYKIIGDTTERASIEILEEEILLDQCYKEFESTLGNVFVSKVEKEYKKDLDIPLYKNKNKKSPSIKVPKPKILIPVFPGTNCEYDSKRAFEKAGGEVELVVFNNMSSDNIKESIDNLSSKIKQSNIIMLPGGFSAGDEPEGSGKFIATIFRNEKIKDSVMEFLKVKDGLMLGICNGFQALIKLGLVPFGEIRDIDESCPTLTYNDIGRHQSKIAYTKVVSNLSPWFNNVEVGDIHAIPISHGEGKFYAKDNVMKKLIDNGQIVTQYVDVNGNVTSDIKYNPNGSIFAVEGICSPDGRILGKMAHSERIGYGTLKNVPGNNDQKIFDAGIKYFK
>NZ_CP013242.1|WP_096043491.1|548045_549395_+|MATE-family-efflux-transporter
MTKNIEEKQEKFEKLTKTPIPKLILKMAIPSTMAMLIGIAYSLADTYFISKIDTISTASVGLAFSFMSVTQAFGLLYGHGSGNYMSRMESKKNRTESSKMAIDGLVISFLTGTIIMIFGELYLNELALFLGATNSLLSSTKEYLLILLIGTPFMISALTMNNQFRLQGNPSLGAAAIASGAVINCILDPIFIFYFNLGIKGAAYATVIGEIISFIILIIVSGMRENIKFNLKNFSINKKILSELYGGGIPNFTREIFIGISLMLLNNELKIFGEEYIASFTIVNRLVLAGTYLMVGLGHGFQPVCIFNYGAKLYERVEKALKFTLRSAIIFMVFISIIFLMYSENMVMLFRNDNEIINIGSQVLSIQSITLPLIGYITITGMFLQSTHKFKEATLITSSRQGYIYIPLILIMSKMLGIKGILYVQPLSDFITFVISVVLVAKYKKELKC
>NZ_CP013242.1|WP_096043490.1|545571_548049_+|hypothetical-protein
MYTKNIIGIKDARKNQIDIVGGKGANLGLMISCGIPVPDGFIITANAYKNFLKSNGILEIIEQKISNMDKETLSIEDKTEEIRNLILKAEFPKDLKEDILSRFNKFKRPIHLAVRSSATAEDLPEASFAGQQETYLNIMNKEDLFVSIKKCFASLWSIRSFSYRTNNGYDHLNVGIAVVIQEMIESDISGVMFTSNPITAEKEIMIDASYNLGEAIVSGKVTPDNYVLDKNGKEIAFTLGSKEISVVYSDKGTVVVNNSFDMRERRCLHNENLKELFDMALKIEGLYKKPMDIEWAIKNKKVYILQARPITTIKKKQNKNARKQYSQKEKKYLNNMIEHFPVACYPLDYEIAMILQNMKFELFKDVGLKIESPIYMDNMGIIHMNKIRWKVNPKVLRFFKVYNEYKNNEKNIEYGEKILDSCKKELKVIEQNINENSYKFSLCDVDKYMSDIISIHKRISFARFRYFLFPSVIIGEKLDKELKSINPNYTEYDLLSDLDYVTVDMNKDIDILSKTLSRNKELIKDLIEGASYAFIKEKYDYDSIEIKEFFNKYGWKSNYCCIPFSSSSWNEEPNRFIKLLKITISENKEYKEKKSGKYMGILKELEESKGTKRFKKTMADITYYRLAHVRREESQYLWETGFGLLRVLLKRIEALLNTKKEDLLYLSFQDLRKVIAIGKLEHECRELISYRKNHRREAEELWEQMTLDAFYDNEKNIFKGISGSSGLVRGRVCIIKNHTEFDKLKEDNILICPYTDPEWTPLFKIAKGVVSDTGGALSHAAIVAREYNIPAVLGVGNATVNLSDGDYILVDGNNGIVKRLSEEII
>NZ_CP013242.1|WP_030035812.1|545291_545567_+|acyl-carrier-protein
MIDNNTKIGLKKQIKKYLSELMDVNTEDIMDDVDLTEMGATSMVIIQLYVILQEEYGISLDATVDLYKSISLNEIVENIEKTKIDLKDIVG
>NZ_CP013242.1|WP_096043489.1|543747_545286_+|acyl--CoA-ligase
MKEKVTFGDIYTVIFQEEDSNKECIIVYNDERRIVYNKKQYQMLINKMSRFLKLLYPNIKVGDWIGLKYHNNYLYYAVVFGAMKLGWNILLLDNKSESNNRYRYEMDVELVAILDNNILDNFDNEAIDIQCLNSKFEKDIWSSKVAFLSSGTTGKPQVIIYHAYAILNQIKNVKYEFLKNETLANIVYKTDNSYRKIVTFLPMNHILGFLLPLIFITLDLKVVFLSDQTPYGIIKGIRNENALGSFGVPMVWKLIKNILKRRYSENREGVDKLLGKNFKIILSGGSKTDASIRNGYIRAGIEFFVGYGLTETGFLSIGKSDLNDCESEGKVYDNYEIKVLTSDGSIRNEGTGEIIVKSDAIYTASIKDKKEICPELIEGMYYRTGDIFELKNRKLFFKGRMKNIIVDESGENIYAEELEEFFKDMKPKGIVYFISEYKNRATMFIDRNTHKRISKEYIIELIREKNKNLPISKKILKVLFLNINIEFTQKGDPIRILKEYRDIGEVFNIKGV
>NZ_CP013242.1|WP_045897877.1|560185_560770_-|sulfurtransferase-like-selenium-metabolism-protein-YedF
MTKIIDCKGLKCPQPVINTKKYFDSIEEGQATTIVDNEVAKNNIIKLAEKNGFKSEVEEKDSLYYITMTKEHCVACEAILSNEKKLVMVISKNVLGGGDDKLGTALMKSYLYALSESDKLPSHLLFLNGGVKLTIEGSECLESIQSLKDKGVTILSCGTCLDFYGIKSKLKVGEITNMYTIVEEMTSADNTIFI
>NZ_CP013242.1|WP_096043498.1|561097_561964_+|DegV-family-protein
MVPIIFTDASCDLPRNFIDENNIPFLGLMCNFKGRDWEDDFGKTLSYEEFYTGIKKGEMPSTSQINEYRFEEKFKELLKEERPIIYIAMSSGLSGTVNSAKMAREEILAQNEKADITIIDTKCSSIGQGLLVYNAVQMAKEGKNKEEIVKWINENKNKVNHWFMVENLTHLKRGGRVSATSATIGTLLNIKPIIHIEKDGTLKNITNIRGSKKAIRYLLDRFKENCTNHEDVLIGIVHGYCAEEAEKLKEMVIEEFGTKNFIINELGIGMGAHCGDGMLALCFIGNNI
>NZ_CP013242.1|WP_096043499.1|562070_562979_+|AEC-family-transporter
MKGNIINQVLILSIIMGIGVICGKRKILNEEANKKLSDLLVKVTLPCLIISSFNYNFTGDMIKNAKMFFIYSIIIHIALLLISGLFFVKYNERARKVLKFSTIFSNSAFMGYPVIEALYGKVGVFYASIFGIPFNIFMLSAGIMIYTGERDVKNLKGILKHPGIIATVLGMFILVFSISIPIPINTALQYVGSMTTPLSMIIVGSMLADINIKEIFSGTEAYYGSFVRLIVIPALVYSLMIILKADKLLLEICVILESMPTAVLATVLAEEYDGDVVLAAKCVFITTILSVITIPLVVAFIS
>NZ_CP013242.1|WP_096043500.1|563112_563880_+|histidinol-phosphate-phosphatase
MFDTHLHTEFSTDSKMTIGEAIKASKDNNLGIIVTEHMDLGLKDENKFCFHVPSYFEKYNKYRSDKLLLGIELGMERDLIEEGKEVINSGEFDYIIGSIHLIDKIDLYLDEFYKDKSKEEAFHIYFKNMSYNLAKYDFVDSLGHIDYISRYANYEDPEINYDIFKENIDEVLKVIVEKEKSMEINTRRLNDKRAVENLVKIYKRFYELGGRTVTLGSDSHNAKDIGNRLSFGKEIADYCNLKVVYYKNRRPEYDK
>NZ_CP013242.1|WP_096043501.1|564055_565303_+|replication-associated-recombination-protein-A
MRPLADLMRPNKLEDFVGQKHILSENKPLYNLMKNKSICNSIFYGPPGTGKTTLANIMANYVDKKFYRLNATTASIKDIQEITSSINSLLNYSGVVLYIDELQHFTKKQQQALLEFIEDGRVVLIASTTENPYFVIHKAILSRCNIFQFKPLNKEEIILGLKKAINKLIDKGINIKYTDEALEYIGEICQGDYRKAYNILELAVNSHCGFNIEITLDYIESLEQSNIRADATGDEYYNILSAFQKSIRGSDADAAVHYLARLIKSGDMTSITRRLSVMAAEDIGLAYPNALTIVNSGIELALKVGFPEAQIILSEITIYLATLPKSNSAYIAIKNAMKDLENINFGDVPGHLKDSHYYGAKNLGVGGYKYPHDFNNHYVSQEYLPKELKDKIYYKAQHNKYEENLKKYWENIKSR
>NZ_CP013242.1|WP_003484625.1|565467_565914_+|Rrf2-family-transcriptional-regulator
MKLSTKGRYGVKAMVDLAINYGGQPVSIKNISERQHISEYYLEQLFSPLRKAKLIKSIRGAQGGYILNRHPKDITVADIMEVLEGPIEISSCLEGEDSCGNVDCCATRLLWAKIKKSLDNIMESTTLQDMVEDYRKINPPIKRSENNE
>NZ_CP013242.1|WP_096043502.1|565906_567100_+|cysteine-desulfurase-NifS
MNKQVYMDYSATTYTKPEVLEEMLPFFTENFGNPSSLYSFSDKTKKAVDLARERVAKVLNAEKNEIFFTSGGSEADNWALKGIAYANKNKGNHIITTKIEHHAILHTAQFLEKEGFKVTYLPVDEEGFVSVENVKNAITDETILVSIMFANNEIGTIEPIKEIGKLCKEKNIYFHTDAVQAIGHVDIDVKDMNIDLLSMSAHKFYGPKGVGALYIRNGVKIQNLIHGGGQERGKRASTEDIAGIVGLGKAIELAIENMPEENKKLANLRGKLIKEVEKRIPEVKLNGPRDMSKRLPNNVNISFIGIEGETLLLDLDMNGIFGSTGSACASASLDPSHVLLSIGLPHEVAHGSLRLSLGAKNTEEDIDYVLEVLPKIIKQRREMSPLWEDYMKNKEEK
>NZ_CP013242.1|WP_045897761.1|567101_567530_+|Fe-S-cluster-assembly-scaffold-protein-NifU
MYTEKVMDHFRNPRNVGEIEDANGIGEVGNAKCGDIMKIYLKVEDNIIKDVKFKTFGCASAIASSSMATELIKGKDLEDAWQLTNKAVAEALEGLPPVKMHCSVLAEEAIHKAINEYRVSQGLEPWEMKTHSEHIHEHVHGH
>NZ_CP013242.1|WP_096043503.1|567710_568199_+|PRC-barrel-domain-containing-protein
MYRSKYFKYMNVYYSNGKKAGFIKDILIDFNEEKIVGFCVSSYKILNKNNIVLVEDIISINKNMVVKKLGRGKYLSFNDIKHLEVIDIEGVLMGVIEDIIINEDDFRIAAIIISMGFLNNFIKGKKIISPNEIILGERNLLYFNYRSRNLDFKIMVKNKINT
>NZ_CP013242.1|WP_096043504.1|568211_569240_+|AI-2E-family-transporter
MRKYYKNLYCKLLFFILVLLIFFIILIKNTIVRDILSLFFISFVIYYILKPIHTFLKHKGVNEKFSALLLVVTLIMIMGVFIISIIPAIIKEGYNITSSVGYIQKYIDYIYNKINLLNNNKILGGILNKINVKIESYTVSIGENILNKFVGFGENILDYAVIPIIVYYFLAAGNKIIQKFFMIFPVKVRGIVKNVFEDIDKILARYIISQIILCLIITILTFLVLVGLGIKLPILLSLINGFFNIIPYFGPVIGSLPAILIAFTKSPKTALWALILLYAIQQIEGDILSPKITGDSVDMHPLTVILLLLIGGKIYGFLGMVLAIPIGVIMKIIYEDLNYYLF

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Crispr_ID: NZ_CP013242_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013242_2

926917-927077

Orphan

III-B

Consensus_repeat	Method
GTTGAACAATAACATAAGATGTATTTAAAT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP013242_2

>merge|NZ_CP013242|2|926917-927077|CRISPRCasFinder
ATTGAACATTAACATAAGATGTATTTAAATCCTCCTAGCTAAAATCTATTGTTATACCTATTTTAATTGAACATTAACATAAGATGTATTTAAATTTGCTTTTTATAAAAGTATCTAGTTTTTTATTTATATTGAACATTAACATAAGATGTATTTAAGCA

>NZ_CP013242|2|2|926917-927077|CRISPRCasFinder
ATTGAACATTAACATAAGATGTATTTAAAT	CCTCCTAGCTAAAATCTATTGTTATACCTATTTTA
ATTGAACATTAACATAAGATGTATTTAAAT	TTGCTTTTTATAAAAGTATCTAGTTTTTTATTTAT
ATTGAACATTAACATAAGATGTATTTAAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013242.1\|WP_045897825.1\|928212_928734_-\|DUF4825-domain-containing-protein	unknown	unknown	gnl\|CDD\|379767
NZ_CP013242.1\|WP_096043690.1\|930775_932182_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|340904
NZ_CP013242.1\|WP_096043681.1\|916310_917159_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP013242.1\|WP_096043693.1\|933846_934341_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_024933310.1\|923390_923684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_096043694.1\|935871_936465_+\|glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|172889
NZ_CP013242.1\|WP_045897823.1\|932255_932429_-\|M24-family-metallopeptidase	unknown	unknown	gnl\|CDD\|238518
NZ_CP013242.1\|WP_096043691.1\|932512_932866_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379790
NZ_CP013242.1\|WP_096043685.1\|922766_923216_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP013242.1\|WP_096043682.1\|918198_920019_+\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP013242.1\|WP_096043687.1\|924625_926623_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239241
NZ_CP013242.1\|WP_096043692.1\|933189_933804_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP013242.1\|WP_096043686.1\|923731_924529_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP013242.1\|WP_096043683.1\|920769_921702_+\|M28-family-peptidase	unknown	unknown	gnl\|CDD\|349913
NZ_CP013242.1\|WP_096043688.1\|929034_929925_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP013242.1\|WP_045897820.1\|934726_935215_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_096043689.1\|929931_930672_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP013242.1\|WP_096043684.1\|922211_922628_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP013242.1\|WP_172819794.1\|921877_922027_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_172819793.1\|920048_920207_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013242.1\|WP_045897825.1\|928212_928734_-\|DUF4825-domain-containing-protein	gnl\|CDD\|379767	pfam16107, DUF4825, Domain of unknown function (DUF4825). This domain forms the N-terminal, extracellular domain of some homologs of Staph BlaR1 proteases, where it replaces the penicillin-binding domain of BlaR1. It is also found in many uncharacterized proteins in a broad range of bacteria. Its association with BlaR1 homologs suggests it may be involved in substrate-, possibly antibiotic-binding, but this prediction has not been verified experimentally.	2.29608e-26
NZ_CP013242.1\|WP_096043690.1\|930775_932182_-\|peptide-MFS-transporter	gnl\|CDD\|340904	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters. The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.22022e-119
NZ_CP013242.1\|WP_096043681.1\|916310_917159_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	6.0191e-60
NZ_CP013242.1\|WP_096043692.1\|933189_933804_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	5.28726e-98
NZ_CP013242.1\|WP_096043694.1\|935871_936465_+\|glycerol-3-phosphate-acyltransferase	gnl\|CDD\|172889	PRK14413, PRK14413, glycerol-3-phosphate acyltransferase.	3.32783e-94
NZ_CP013242.1\|WP_045897823.1\|932255_932429_-\|M24-family-metallopeptidase	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	1.06402e-11
NZ_CP013242.1\|WP_096043691.1\|932512_932866_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	gnl\|CDD\|379790	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain.	5.55001e-13
NZ_CP013242.1\|WP_096043685.1\|922766_923216_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.40078e-36
NZ_CP013242.1\|WP_096043682.1\|918198_920019_+\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.59605e-123
NZ_CP013242.1\|WP_096043687.1\|924625_926623_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|239241	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.	0
NZ_CP013242.1\|WP_096043686.1\|923731_924529_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.1393e-15
NZ_CP013242.1\|WP_096043683.1\|920769_921702_+\|M28-family-peptidase	gnl\|CDD\|349913	cd05663, M28_like_PA_PDZ_associated, M28 Zn-peptidase containing a protease-associated (PA) domain insert and associated with a PDZ domain. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions. This subfamily is composed of uncharacterized proteins, many of which contain a protease-associated (PA) domain insert which may participate in substrate binding and/or promote conformational changes, influencing the stability and accessibility of the site to substrate. Proteins in this subfamily are also associated with the PDZ domain, a widespread protein module that has been recruited to serve multiple functions during the course of evolution.	1.42731e-45
NZ_CP013242.1\|WP_096043688.1\|929034_929925_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.28736e-27
NZ_CP013242.1\|WP_096043689.1\|929931_930672_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.87458e-12
NZ_CP013242.1\|WP_096043684.1\|922211_922628_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.34982e-14

>NZ_CP013242.1|WP_096043687.1|924625_926623_+|FAD-dependent-oxidoreductase
MKDKYKVLYDPIKIGKLEIKNRYVLAPMGPGGMCNADGSFNKRGIEFYVERAKGGTGLIMTGVTMVENNIEKCALPSMPCPTINPLNFITTGNEMTERVHAYGSKIFLQLSAGFGRVSIPSIVGKVAVAPSKIPHRFLPGVTCRELTTEEVKEYVKAFGESAEIAKKAGFDGVEIHAVHEGYLLDQFAISFFNHRTDEYGGSLENRLRFACEVVQEIKKRCGQDFPVSLRYSIKSFIKDWCKGGLPDEEFEEKGRDIPEGIEAAKILVAAGYDALNGDVGSYDSWYWSHPPMYQKKGLYLPYNEILKKVVDVPIITAGRMEDPELSSDAILSGKTDMIALGRPLLADAEIPNKIFEDKYDKVRPCLSCQEGCMGRLQNFATVSCAVNPACGREKEYGLKKAEQIKKVLIVGGGVAGMEAARVAAIRGHKVTLIEKNGYLGGNIVPGGVPDFKDDDRALVKWYEGILKDLGVEIKLNVDASRENIKEFGADEVLLATGSSPRTLTIEGADKVYSAEDVLMERKNVGEKVIVIGGGLVGCETALWLKQQGKDVTIVEMQNDILQVGGPLCHANHDMLNDLIKFNKINVKTSSYISKKTDKGFVLNTNGQESIINADSAVVAIGYLSEKDLYNQVRFDIPNARLIGDANKVQNIMYAIWSAYEVAKNI
>NZ_CP013242.1|WP_096043686.1|923731_924529_+|MerR-family-transcriptional-regulator
MRYSITDLAEILGCTTSAIHYFEKEHLIEVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEKRETMYQLEALKRAQYYMNLADAIEEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQKIIHEWVKAMPTVQLGVFDSRMGISNFGYLVKTKKREELELPLGLHAKELKSTSCIHTIVMADEDFTQHPQKVFKKASEFAIKKGLEIGEIAWGKILLVEVEKGAKLHPYIELWISIKI
>NZ_CP013242.1|WP_024933310.1|923390_923684_+|hypothetical-protein
MNFFTLNILIGAMAFIINKINNMSQDIDPFEAFNDIEENLDEIDNEKVTNFVNGLINASMSNPSIGYFFMFLVYMTPILNLLLLIKGIVNYFNREAG
>NZ_CP013242.1|WP_096043685.1|922766_923216_+|Lrp/AsnC-family-transcriptional-regulator
MKLDEIDVLILQELQKDSRLSIRELSKRINLSPPSVTERVRRLEDDGVIERYTIKINKKKLGMSIDCIVKVTMKNGQYEKFKIFIKEYKRSEWCYRIAGDGCFLVKLLVKSLNDIEEFINDISSYAITETIIAFSEVTINNSINKFLAE
>NZ_CP013242.1|WP_096043684.1|922211_922628_-|carboxymuconolactone-decarboxylase-family-protein
MAKITFSQEGLTPFQQLLGHNKYIMEKWTSLEECFFNSNTFTHELKEEVRRTLAFNNGCQYCMSKGKPSNEITDSKILIATKIADIISKNQLIDNECFNRLKNKFSDNEVSELLALICFITASQKFGALLDLQPSCSI
>NZ_CP013242.1|WP_172819794.1|921877_922027_+|hypothetical-protein
MKKEVELIKEAVENLLNAELLEENGWTEEDIEILNKLKDKDFYITFKEG
>NZ_CP013242.1|WP_096043683.1|920769_921702_+|M28-family-peptidase
MKSTESNGKTVTDEQSSKSTQVETHVKIPTTKEIVNTLCSDEFEGRLIGSKGNGKAGEYVNKIFKDIGLAPLFGNSYYEKYSQDIIKVYGGGEDSKMGTINNVVGVIKGKNSKKAVVISAHFDHIGYQDGKIIRGALDNASGMSALIKVANNLKEKSKEKPFDMDIVICAFNGEEEGLAGSRAFVDEIISKSLYENLYNINIDSVGSKNGGKLALKNKSKVSDKLYASVKTTLKKNNIEFADTTIRGASDHMSFENEKIPNFFFVQENIKELIHKPTDTPDTLDYEQIDRIANAISDFVETNNGIMFEAE
>NZ_CP013242.1|WP_172819793.1|920048_920207_+|hypothetical-protein
MSWKLSRTVLTGGKGGDNFKALPIRIVALENKIANKVLQKLNNTVYNAINVN
>NZ_CP013242.1|WP_096043682.1|918198_920019_+|group-II-intron-reverse-transcriptase/maturase
MTTIKKKPKKRQKLRNNEYYDIQEDFDTLYEKSKDGNKFRDLLTLICDERNILLAYRNIKKNKGSKTKGVNSNTIIEIGENNTDKLIKYVRNRLANYQPQSVRRVEIPKPNGKARPLGIPTIEDRIIQQCIKQVLEPICEAKFHKDSYGFRPNRSTHHAIARAYSMANINKLNYVIDVDIKGFFDNVNHSKLLKQMWTMGIQDKNLLCIISKMLKAEIKGRGIPDKGTPQGGILSPLLSNIVLNELDWWISSQWQTFKSKFPYKKQIFKYKALKRSKLKEVYIVRYADDFKLFCRNYNSAKKIFKAVTIWLKERLHLEISEEKSSIVNLRRKYSEFLGFKFKVKSKNKKYVVTSKISNKAKEKVRKNLIDRIKHIKRRANISTVNKYNATVLGMHNYYKVATEVNIDFSKIAYTVNRVIYNRLRGLSTKRGFKSEAYKRLYGKYNFKEVSIARMTLYPIAGITTKPPLNFPKGVNNYTVEGRDKIHENLKKYSVKLLKYITENPVKGATTEFNDNRISLYISQNGKCGITGKVLEHGEIEVHHKIPKGKGGTDKYKNLIVVSNTIHKLIHATVTETIEKYKNIAKLDKDQTSKINRFRKMVENCEI
>NZ_CP013242.1|WP_096043681.1|916310_917159_+|PhzF-family-phenazine-biosynthesis-protein
MEYFHVDVFSNEILYGNGLTVVFCNEELEDNIMLKLTQEFKQFETIFVRRIDNSIFNARIFTVDEELDFAGHPILGAAATIHSNIFRNEEDIAITFQLNQKTIIVNSKKIEEYYEVQMNQGKAEFLCEVSKEKRNKYVHALNLSEENLSEEFPMEVVSTGLPYLLVPLTSGIENAKIISSKFEEMLKEVGAKFAYIFDVNYIEGRTWDNQGNVEDVATGSAAGPLGAYLYKHNIFNVGHEIIINQGRFVGRPSKIKVSMSISEKEILVSGEVAILAKGNILL
>NZ_CP013242.1|WP_045897825.1|928212_928734_-|DUF4825-domain-containing-protein
MKNKFKVLIPLIIILSLNLVGCGMNSEKKSKENIKNSSKVETYDLIKYKGTYVGDNSSVGNIIKNLPANEYSAGFSLQTSKEPYEITVNYKANENLGEENYNKFWNDKKANKLLEKNAVVLLSLIPNAEIIKFNVDNIGEKSYKYDRKNLDQKYGNLKNLFKDNDSLNKFLNN
>NZ_CP013242.1|WP_096043688.1|929034_929925_+|AraC-family-transcriptional-regulator
MNYRKDIENCIDYIEEHIKEPLTVNQITKEIGYSSYHFCRVFSFLKGMPLMEYVRKRRLSLSTIDLLEGKKIIDVAFKWGFETPSSFARAFRKEFECSPSQYIKKMKSYYKSENNLILGKFMNDPYIVKKHGFKVAGYGIKTNVADSKYTKDVASFWSNYNGENLESKLYKILSPLKHGEVGLCIPCSDSGDVTYLLGVIVEDFSKVTSDMITVEIPKAQYAVFTTNPVNTVDSKDQREFAKIIKESWKYIFDEWFKNNDYEYDEEKLDFEFYDERCHLRPDTVMNIYVPIKKLER
>NZ_CP013242.1|WP_096043689.1|929931_930672_+|class-I-SAM-dependent-methyltransferase
MINYYGSLCTVMYELLHPHAPEDELQFYLQYAKKEMKILEPLCGSGRFLVPFLERGFNITGFDMSEEMLKELYKKDPKAKVFQSSIEEFSPEEKYDYIFITSGSFSLFLDEDIAFNVLVKMREALAPRGKFVFAVETTANIISDREEYLENCYAKTKEGYDIIFKSKSFYDKHKKILSTPSLYELYDGDNLLGKEEMDFRIKLYDFRELDKLILKAGFKGSHVFSDFNRRESIDKNTETFLYECYI
>NZ_CP013242.1|WP_096043690.1|930775_932182_-|peptide-MFS-transporter
MSEKKQKHPIGLWLVNISIALQSYAAYAVVSILILFLTADISKNGLGLSVPKAAAIIGLYQGINYMGSLVGGYITDKWLGIQKSLILGCFLTACGYLALFFAKPNIGSVWLGLIILIVAGAFFKAQISSLVGELYGKNELSKKDAAYSIFYMFINIGAFFGPIIAGLISDKWFAKVAADGEIAAYGYKYIFLMCTLIMIFIGIFIWIVSPKWLGEVGKYPVSKDKKTSTESVSTKSTEKAKAQPLTQLEKNRIKAMIVMFVFVIIFWSAWDQTATSFSLLANKLVNRTIGGFTMPVPWLTSINAIFCVVLSPIIANIWLKLGNSKKGDLSVPTKMGLGMILTGIAFLTLILGISTLGGVLDGSKQMNILFIIVAYFLLTVGELCLSPIGMAMFNKLAPAKYGSLAMGAWYLSFFFSSIISGKLAGFTDTLGYTQIFGLISGIVIVFGVILILLRNGLLKLMSLDELDK
>NZ_CP013242.1|WP_045897823.1|932255_932429_-|M24-family-metallopeptidase
MNIHETPTGFRWQYRPKETHRFEEDIVITDEPGIYIAGSHGIRIENEIIVCKGENNG
>NZ_CP013242.1|WP_096043691.1|932512_932866_-|aminopeptidase-P-family-N-terminal-domain-containing-protein
MHLFINENKLNDEIKSNLKENGALFIHPYNKIYKEVKKFTNSDVVLVHPDRMNYALYNNIDKEVITEISSFNKLDAFPAEQGRFIRPSFEPISSFGEHATIVTCILLMENSFMIVTV
>NZ_CP013242.1|WP_096043692.1|933189_933804_+|sugar-O-acetyltransferase
MNQKDRMLAGLPYKACLDGLPEERMANKKKIYEYNHCLPNEHEKIHKLIRDILGKAGADVHIEAPFYCDYGKNIEVGDNFFANYNCTILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSRNSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGSVVTKDIPDNVIAIGNPCKVIREITEKDRKYYYKNYEFDVDDYKG
>NZ_CP013242.1|WP_096043693.1|933846_934341_+|hypothetical-protein
MILAIECFIACLIFTLIILPSLYKKPIKHIMSYPTEIRKRVESLPQYKDVIQKKEKKHLTVKIIAVFMFAIILAVVAYFSGAKSFSKAYIHVFTLFFVVNIYDMIVLDICIFCHSKKTRIPGTEDMDKEYRSPWHHIKGAGIGTIIGAVVALLSGGMVHFISII
>NZ_CP013242.1|WP_045897820.1|934726_935215_-|hypothetical-protein
MISKKIIAFIAMTIMMIILLIGCSNNTMDKVYNDNSKIASVYDTFGLDKSDEIIESGIYKGKLKLSGSGTIWTYESSSDFDLKVPYILSVKSGKAKIVLISPDNTVVNLVENTDKATMKETTSLTLPIKKGNNRIKLVGYKKADIDIELHIEKGTFEKISFN
>NZ_CP013242.1|WP_096043694.1|935871_936465_+|glycerol-3-phosphate-acyltransferase
MIIIITSVISFLLGSIPTGYFITKKTCGIDIRTKGSGNIGSTNVKRIVGTKISIITQIIDVLKGIIPVVLGIYLSKIVKLPVSTNTYLSIIAIAAILGHDYTPFLKFKGGKGVNTTLGVFIFIAPISTLTGLAVYFILGLFTSIVSIRSIAIGITIPIMCIITKLPIQIIISTTIAGILMVFRHKDNLVRIMRKEEK

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Crispr_ID: NZ_CP013242_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013242_3

927357-927711

Orphan

III-B

Consensus_repeat	Method
GTTGAACAATAACATAAGATGTATTTAAAT	PILER-CR
GTTGAACAATAACATAAGATGTATTTAAAT	CRISPRCasFinder
GTTGAACAATAACATAAGATGTATTTAAAT	CRT

5 spacers

The CRISPR arrays of NZ_CP013242_3

>merge|NZ_CP013242|3|927357-927711|PILER-CR,CRISPRCasFinder,CRT
GTTGAACAATAACATAAGATGTATTTAAATCAGTTTATATTAAGAATTTTGTCCTTAGGAATAAGTTGAACAATAACATAAGATGTATTTAAATAATTATAATTTATTAGTACCAATAATTTGTCATGTTGAACAATAACATAAGATGTATTTAAATTCTACAGATATAAGAGAAAAGATTACAAGGCCTTCGTTGAACAATAACATAAGATGTATTTAAATTTGAATTTATCTGTTTTATCTACCTTATTAGGTTTGGTTGAACAATAATATAAGATGTATTTAAATCTGATGAGTTAATACTATATCTTTTAGTATTACTTAAGTTGAACAATAACATAAGATGTATTTAATC

>NZ_CP013242|3|1|927357-927711|PILER-CR
GTTGAACAATAACATAAGATGTATTTAAAT	CAGTTTATATTAAGAATTTTGTCCTTAGGAATAA
GTTGAACAATAACATAAGATGTATTTAAAT	AATTATAATTTATTAGTACCAATAATTTGTCAT
GTTGAACAATAACATAAGATGTATTTAAAT	TCTACAGATATAAGAGAAAAGATTACAAGGCCTTC
GTTGAACAATAACATAAGATGTATTTAAAT	TTGAATTTATCTGTTTTATCTACCTTATTAGGTTTG
GTTGAACAATAATATAAGATGTATTTAAAT	CTGATGAGTTAATACTATATCTTTTAGTATTACTTAA
GTTGAACAATAACATAAGATGTATTTAATC

>NZ_CP013242|3|3|927357-927711|CRISPRCasFinder
GTTGAACAATAACATAAGATGTATTTAAAT	CAGTTTATATTAAGAATTTTGTCCTTAGGAATAA
GTTGAACAATAACATAAGATGTATTTAAAT	AATTATAATTTATTAGTACCAATAATTTGTCAT
GTTGAACAATAACATAAGATGTATTTAAAT	TCTACAGATATAAGAGAAAAGATTACAAGGCCTTC
GTTGAACAATAACATAAGATGTATTTAAAT	TTGAATTTATCTGTTTTATCTACCTTATTAGGTTTG
GTTGAACAATAATATAAGATGTATTTAAAT	CTGATGAGTTAATACTATATCTTTTAGTATTACTTAA
GTTGAACAATAACATAAGATGTATTTAATC

>NZ_CP013242|3|1|927357-927711|CRT
GTTGAACAATAACATAAGATGTATTTAAAT	CAGTTTATATTAAGAATTTTGTCCTTAGGAATAA
GTTGAACAATAACATAAGATGTATTTAAAT	AATTATAATTTATTAGTACCAATAATTTGTCAT
GTTGAACAATAACATAAGATGTATTTAAAT	TCTACAGATATAAGAGAAAAGATTACAAGGCCTTC
GTTGAACAATAACATAAGATGTATTTAAAT	TTGAATTTATCTGTTTTATCTACCTTATTAGGTTTG
GTTGAACAATAATATAAGATGTATTTAAAT	CTGATGAGTTAATACTATATCTTTTAGTATTACTTAA
GTTGAACAATAACATAAGATGTATTTAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013242.1\|WP_045897825.1\|928212_928734_-\|DUF4825-domain-containing-protein	unknown	unknown	gnl\|CDD\|379767
NZ_CP013242.1\|WP_096043690.1\|930775_932182_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|340904
NZ_CP013242.1\|WP_096043681.1\|916310_917159_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP013242.1\|WP_096043693.1\|933846_934341_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_024933310.1\|923390_923684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_096043694.1\|935871_936465_+\|glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|172889
NZ_CP013242.1\|WP_045897823.1\|932255_932429_-\|M24-family-metallopeptidase	unknown	unknown	gnl\|CDD\|238518
NZ_CP013242.1\|WP_096043691.1\|932512_932866_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379790
NZ_CP013242.1\|WP_096043685.1\|922766_923216_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP013242.1\|WP_096043682.1\|918198_920019_+\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP013242.1\|WP_096043687.1\|924625_926623_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239241
NZ_CP013242.1\|WP_096043692.1\|933189_933804_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP013242.1\|WP_096043686.1\|923731_924529_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP013242.1\|WP_096043683.1\|920769_921702_+\|M28-family-peptidase	unknown	unknown	gnl\|CDD\|349913
NZ_CP013242.1\|WP_096043688.1\|929034_929925_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP013242.1\|WP_045897820.1\|934726_935215_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_096043689.1\|929931_930672_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP013242.1\|WP_096043684.1\|922211_922628_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP013242.1\|WP_172819794.1\|921877_922027_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_172819793.1\|920048_920207_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP013242.1\|WP_045897825.1\|928212_928734_-\|DUF4825-domain-containing-protein	gnl\|CDD\|379767	pfam16107, DUF4825, Domain of unknown function (DUF4825). This domain forms the N-terminal, extracellular domain of some homologs of Staph BlaR1 proteases, where it replaces the penicillin-binding domain of BlaR1. It is also found in many uncharacterized proteins in a broad range of bacteria. Its association with BlaR1 homologs suggests it may be involved in substrate-, possibly antibiotic-binding, but this prediction has not been verified experimentally.	2.29608e-26
NZ_CP013242.1\|WP_096043690.1\|930775_932182_-\|peptide-MFS-transporter	gnl\|CDD\|340904	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters. The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.22022e-119
NZ_CP013242.1\|WP_096043681.1\|916310_917159_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	6.0191e-60
NZ_CP013242.1\|WP_096043692.1\|933189_933804_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	5.28726e-98
NZ_CP013242.1\|WP_096043694.1\|935871_936465_+\|glycerol-3-phosphate-acyltransferase	gnl\|CDD\|172889	PRK14413, PRK14413, glycerol-3-phosphate acyltransferase.	3.32783e-94
NZ_CP013242.1\|WP_045897823.1\|932255_932429_-\|M24-family-metallopeptidase	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	1.06402e-11
NZ_CP013242.1\|WP_096043691.1\|932512_932866_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	gnl\|CDD\|379790	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain.	5.55001e-13
NZ_CP013242.1\|WP_096043685.1\|922766_923216_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.40078e-36
NZ_CP013242.1\|WP_096043682.1\|918198_920019_+\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.59605e-123
NZ_CP013242.1\|WP_096043687.1\|924625_926623_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|239241	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.	0
NZ_CP013242.1\|WP_096043686.1\|923731_924529_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.1393e-15
NZ_CP013242.1\|WP_096043683.1\|920769_921702_+\|M28-family-peptidase	gnl\|CDD\|349913	cd05663, M28_like_PA_PDZ_associated, M28 Zn-peptidase containing a protease-associated (PA) domain insert and associated with a PDZ domain. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions. This subfamily is composed of uncharacterized proteins, many of which contain a protease-associated (PA) domain insert which may participate in substrate binding and/or promote conformational changes, influencing the stability and accessibility of the site to substrate. Proteins in this subfamily are also associated with the PDZ domain, a widespread protein module that has been recruited to serve multiple functions during the course of evolution.	1.42731e-45
NZ_CP013242.1\|WP_096043688.1\|929034_929925_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.28736e-27
NZ_CP013242.1\|WP_096043689.1\|929931_930672_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.87458e-12
NZ_CP013242.1\|WP_096043684.1\|922211_922628_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.34982e-14

>NZ_CP013242.1|WP_096043687.1|924625_926623_+|FAD-dependent-oxidoreductase
MKDKYKVLYDPIKIGKLEIKNRYVLAPMGPGGMCNADGSFNKRGIEFYVERAKGGTGLIMTGVTMVENNIEKCALPSMPCPTINPLNFITTGNEMTERVHAYGSKIFLQLSAGFGRVSIPSIVGKVAVAPSKIPHRFLPGVTCRELTTEEVKEYVKAFGESAEIAKKAGFDGVEIHAVHEGYLLDQFAISFFNHRTDEYGGSLENRLRFACEVVQEIKKRCGQDFPVSLRYSIKSFIKDWCKGGLPDEEFEEKGRDIPEGIEAAKILVAAGYDALNGDVGSYDSWYWSHPPMYQKKGLYLPYNEILKKVVDVPIITAGRMEDPELSSDAILSGKTDMIALGRPLLADAEIPNKIFEDKYDKVRPCLSCQEGCMGRLQNFATVSCAVNPACGREKEYGLKKAEQIKKVLIVGGGVAGMEAARVAAIRGHKVTLIEKNGYLGGNIVPGGVPDFKDDDRALVKWYEGILKDLGVEIKLNVDASRENIKEFGADEVLLATGSSPRTLTIEGADKVYSAEDVLMERKNVGEKVIVIGGGLVGCETALWLKQQGKDVTIVEMQNDILQVGGPLCHANHDMLNDLIKFNKINVKTSSYISKKTDKGFVLNTNGQESIINADSAVVAIGYLSEKDLYNQVRFDIPNARLIGDANKVQNIMYAIWSAYEVAKNI
>NZ_CP013242.1|WP_096043686.1|923731_924529_+|MerR-family-transcriptional-regulator
MRYSITDLAEILGCTTSAIHYFEKEHLIEVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEKRETMYQLEALKRAQYYMNLADAIEEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQKIIHEWVKAMPTVQLGVFDSRMGISNFGYLVKTKKREELELPLGLHAKELKSTSCIHTIVMADEDFTQHPQKVFKKASEFAIKKGLEIGEIAWGKILLVEVEKGAKLHPYIELWISIKI
>NZ_CP013242.1|WP_024933310.1|923390_923684_+|hypothetical-protein
MNFFTLNILIGAMAFIINKINNMSQDIDPFEAFNDIEENLDEIDNEKVTNFVNGLINASMSNPSIGYFFMFLVYMTPILNLLLLIKGIVNYFNREAG
>NZ_CP013242.1|WP_096043685.1|922766_923216_+|Lrp/AsnC-family-transcriptional-regulator
MKLDEIDVLILQELQKDSRLSIRELSKRINLSPPSVTERVRRLEDDGVIERYTIKINKKKLGMSIDCIVKVTMKNGQYEKFKIFIKEYKRSEWCYRIAGDGCFLVKLLVKSLNDIEEFINDISSYAITETIIAFSEVTINNSINKFLAE
>NZ_CP013242.1|WP_096043684.1|922211_922628_-|carboxymuconolactone-decarboxylase-family-protein
MAKITFSQEGLTPFQQLLGHNKYIMEKWTSLEECFFNSNTFTHELKEEVRRTLAFNNGCQYCMSKGKPSNEITDSKILIATKIADIISKNQLIDNECFNRLKNKFSDNEVSELLALICFITASQKFGALLDLQPSCSI
>NZ_CP013242.1|WP_172819794.1|921877_922027_+|hypothetical-protein
MKKEVELIKEAVENLLNAELLEENGWTEEDIEILNKLKDKDFYITFKEG
>NZ_CP013242.1|WP_096043683.1|920769_921702_+|M28-family-peptidase
MKSTESNGKTVTDEQSSKSTQVETHVKIPTTKEIVNTLCSDEFEGRLIGSKGNGKAGEYVNKIFKDIGLAPLFGNSYYEKYSQDIIKVYGGGEDSKMGTINNVVGVIKGKNSKKAVVISAHFDHIGYQDGKIIRGALDNASGMSALIKVANNLKEKSKEKPFDMDIVICAFNGEEEGLAGSRAFVDEIISKSLYENLYNINIDSVGSKNGGKLALKNKSKVSDKLYASVKTTLKKNNIEFADTTIRGASDHMSFENEKIPNFFFVQENIKELIHKPTDTPDTLDYEQIDRIANAISDFVETNNGIMFEAE
>NZ_CP013242.1|WP_172819793.1|920048_920207_+|hypothetical-protein
MSWKLSRTVLTGGKGGDNFKALPIRIVALENKIANKVLQKLNNTVYNAINVN
>NZ_CP013242.1|WP_096043682.1|918198_920019_+|group-II-intron-reverse-transcriptase/maturase
MTTIKKKPKKRQKLRNNEYYDIQEDFDTLYEKSKDGNKFRDLLTLICDERNILLAYRNIKKNKGSKTKGVNSNTIIEIGENNTDKLIKYVRNRLANYQPQSVRRVEIPKPNGKARPLGIPTIEDRIIQQCIKQVLEPICEAKFHKDSYGFRPNRSTHHAIARAYSMANINKLNYVIDVDIKGFFDNVNHSKLLKQMWTMGIQDKNLLCIISKMLKAEIKGRGIPDKGTPQGGILSPLLSNIVLNELDWWISSQWQTFKSKFPYKKQIFKYKALKRSKLKEVYIVRYADDFKLFCRNYNSAKKIFKAVTIWLKERLHLEISEEKSSIVNLRRKYSEFLGFKFKVKSKNKKYVVTSKISNKAKEKVRKNLIDRIKHIKRRANISTVNKYNATVLGMHNYYKVATEVNIDFSKIAYTVNRVIYNRLRGLSTKRGFKSEAYKRLYGKYNFKEVSIARMTLYPIAGITTKPPLNFPKGVNNYTVEGRDKIHENLKKYSVKLLKYITENPVKGATTEFNDNRISLYISQNGKCGITGKVLEHGEIEVHHKIPKGKGGTDKYKNLIVVSNTIHKLIHATVTETIEKYKNIAKLDKDQTSKINRFRKMVENCEI
>NZ_CP013242.1|WP_096043681.1|916310_917159_+|PhzF-family-phenazine-biosynthesis-protein
MEYFHVDVFSNEILYGNGLTVVFCNEELEDNIMLKLTQEFKQFETIFVRRIDNSIFNARIFTVDEELDFAGHPILGAAATIHSNIFRNEEDIAITFQLNQKTIIVNSKKIEEYYEVQMNQGKAEFLCEVSKEKRNKYVHALNLSEENLSEEFPMEVVSTGLPYLLVPLTSGIENAKIISSKFEEMLKEVGAKFAYIFDVNYIEGRTWDNQGNVEDVATGSAAGPLGAYLYKHNIFNVGHEIIINQGRFVGRPSKIKVSMSISEKEILVSGEVAILAKGNILL
>NZ_CP013242.1|WP_045897825.1|928212_928734_-|DUF4825-domain-containing-protein
MKNKFKVLIPLIIILSLNLVGCGMNSEKKSKENIKNSSKVETYDLIKYKGTYVGDNSSVGNIIKNLPANEYSAGFSLQTSKEPYEITVNYKANENLGEENYNKFWNDKKANKLLEKNAVVLLSLIPNAEIIKFNVDNIGEKSYKYDRKNLDQKYGNLKNLFKDNDSLNKFLNN
>NZ_CP013242.1|WP_096043688.1|929034_929925_+|AraC-family-transcriptional-regulator
MNYRKDIENCIDYIEEHIKEPLTVNQITKEIGYSSYHFCRVFSFLKGMPLMEYVRKRRLSLSTIDLLEGKKIIDVAFKWGFETPSSFARAFRKEFECSPSQYIKKMKSYYKSENNLILGKFMNDPYIVKKHGFKVAGYGIKTNVADSKYTKDVASFWSNYNGENLESKLYKILSPLKHGEVGLCIPCSDSGDVTYLLGVIVEDFSKVTSDMITVEIPKAQYAVFTTNPVNTVDSKDQREFAKIIKESWKYIFDEWFKNNDYEYDEEKLDFEFYDERCHLRPDTVMNIYVPIKKLER
>NZ_CP013242.1|WP_096043689.1|929931_930672_+|class-I-SAM-dependent-methyltransferase
MINYYGSLCTVMYELLHPHAPEDELQFYLQYAKKEMKILEPLCGSGRFLVPFLERGFNITGFDMSEEMLKELYKKDPKAKVFQSSIEEFSPEEKYDYIFITSGSFSLFLDEDIAFNVLVKMREALAPRGKFVFAVETTANIISDREEYLENCYAKTKEGYDIIFKSKSFYDKHKKILSTPSLYELYDGDNLLGKEEMDFRIKLYDFRELDKLILKAGFKGSHVFSDFNRRESIDKNTETFLYECYI
>NZ_CP013242.1|WP_096043690.1|930775_932182_-|peptide-MFS-transporter
MSEKKQKHPIGLWLVNISIALQSYAAYAVVSILILFLTADISKNGLGLSVPKAAAIIGLYQGINYMGSLVGGYITDKWLGIQKSLILGCFLTACGYLALFFAKPNIGSVWLGLIILIVAGAFFKAQISSLVGELYGKNELSKKDAAYSIFYMFINIGAFFGPIIAGLISDKWFAKVAADGEIAAYGYKYIFLMCTLIMIFIGIFIWIVSPKWLGEVGKYPVSKDKKTSTESVSTKSTEKAKAQPLTQLEKNRIKAMIVMFVFVIIFWSAWDQTATSFSLLANKLVNRTIGGFTMPVPWLTSINAIFCVVLSPIIANIWLKLGNSKKGDLSVPTKMGLGMILTGIAFLTLILGISTLGGVLDGSKQMNILFIIVAYFLLTVGELCLSPIGMAMFNKLAPAKYGSLAMGAWYLSFFFSSIISGKLAGFTDTLGYTQIFGLISGIVIVFGVILILLRNGLLKLMSLDELDK
>NZ_CP013242.1|WP_045897823.1|932255_932429_-|M24-family-metallopeptidase
MNIHETPTGFRWQYRPKETHRFEEDIVITDEPGIYIAGSHGIRIENEIIVCKGENNG
>NZ_CP013242.1|WP_096043691.1|932512_932866_-|aminopeptidase-P-family-N-terminal-domain-containing-protein
MHLFINENKLNDEIKSNLKENGALFIHPYNKIYKEVKKFTNSDVVLVHPDRMNYALYNNIDKEVITEISSFNKLDAFPAEQGRFIRPSFEPISSFGEHATIVTCILLMENSFMIVTV
>NZ_CP013242.1|WP_096043692.1|933189_933804_+|sugar-O-acetyltransferase
MNQKDRMLAGLPYKACLDGLPEERMANKKKIYEYNHCLPNEHEKIHKLIRDILGKAGADVHIEAPFYCDYGKNIEVGDNFFANYNCTILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSRNSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGSVVTKDIPDNVIAIGNPCKVIREITEKDRKYYYKNYEFDVDDYKG
>NZ_CP013242.1|WP_096043693.1|933846_934341_+|hypothetical-protein
MILAIECFIACLIFTLIILPSLYKKPIKHIMSYPTEIRKRVESLPQYKDVIQKKEKKHLTVKIIAVFMFAIILAVVAYFSGAKSFSKAYIHVFTLFFVVNIYDMIVLDICIFCHSKKTRIPGTEDMDKEYRSPWHHIKGAGIGTIIGAVVALLSGGMVHFISII
>NZ_CP013242.1|WP_045897820.1|934726_935215_-|hypothetical-protein
MISKKIIAFIAMTIMMIILLIGCSNNTMDKVYNDNSKIASVYDTFGLDKSDEIIESGIYKGKLKLSGSGTIWTYESSSDFDLKVPYILSVKSGKAKIVLISPDNTVVNLVENTDKATMKETTSLTLPIKKGNNRIKLVGYKKADIDIELHIEKGTFEKISFN
>NZ_CP013242.1|WP_096043694.1|935871_936465_+|glycerol-3-phosphate-acyltransferase
MIIIITSVISFLLGSIPTGYFITKKTCGIDIRTKGSGNIGSTNVKRIVGTKISIITQIIDVLKGIIPVVLGIYLSKIVKLPVSTNTYLSIIAIAAILGHDYTPFLKFKGGKGVNTTLGVFIFIAPISTLTGLAVYFILGLFTSIVSIRSIAIGITIPIMCIITKLPIQIIISTTIAGILMVFRHKDNLVRIMRKEEK

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Crispr_ID: NZ_CP013242_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013242_4

2647411-2647516

Orphan

Consensus_repeat	Method
TTATTTTCATAATTATTAATTCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013242_4

>merge|NZ_CP013242|4|2647411-2647516|CRISPRCasFinder
TTATTTTCATAATTATTAATTCTCATAGAACACCCAGTTAAAGTTGGTACTGCTAATAATATAGCAAAAACTAGCATAAGAAATTTTTTCATAATTATTAATTCTC

>NZ_CP013242|4|4|2647411-2647516|CRISPRCasFinder
TTATTTTCATAATTATTAATTCTC	ATAGAACACCCAGTTAAAGTTGGTACTGCTAATAATATAGCAAAAACTAGCATAAGAA
ATTTTTTCATAATTATTAATTCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013242.1\|WP_045896447.1\|2651764_2653198_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP013242.1\|WP_045898911.1\|2658783_2659170_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP013242.1\|WP_096045384.1\|2649238_2650234_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP013242.1\|WP_096044639.1\|2644846_2645839_-\|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl\|CDD\|226979
NZ_CP013242.1\|WP_045899017.1\|2635765_2636641_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP013242.1\|WP_045899016.1\|2640037_2640763_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP013242.1\|WP_096044645.1\|2659460_2660186_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225117
NZ_CP013242.1\|WP_045899009.1\|2646163_2646817_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP013242.1\|WP_096044642.1\|2653225_2653663_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP013242.1\|WP_003384787.1\|2653835_2654324_-\|ferritin-family-protein	unknown	unknown	gnl\|CDD\|153104
NZ_CP013242.1\|WP_096044636.1\|2638994_2640041_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP013242.1\|WP_045898909.1\|2660392_2660722_+\|tRNA-binding-protein	unknown	unknown	gnl\|CDD\|182232
NZ_CP013242.1\|WP_157672550.1\|2645875_2646022_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_096044638.1\|2643760_2644834_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013242.1\|WP_085333116.1\|2642790_2643534_-\|M15-family-metallopeptidase	unknown	unknown	gnl\|CDD\|350624
NZ_CP013242.1\|WP_096044643.1\|2654921_2656199_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|236722
NZ_CP013242.1\|WP_043031458.1\|2636765_2637956_+\|coenzyme-F420-0:L-glutamate-ligase	unknown	unknown	gnl\|CDD\|376711
NZ_CP013242.1\|WP_096044644.1\|2656366_2658262_-\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|224114
NZ_CP013242.1\|WP_096044641.1\|2650419_2651244_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293799
NZ_CP013242.1\|WP_096044637.1\|2641857_2642544_+\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|132880

Protein	Function_ID	Function_description	E-value
NZ_CP013242.1\|WP_045898911.1\|2658783_2659170_-\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	2.35448e-20
NZ_CP013242.1\|WP_096045384.1\|2649238_2650234_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.04497e-25
NZ_CP013242.1\|WP_096044637.1\|2641857_2642544_+\|DNA-alkylation-repair-protein	gnl\|CDD\|132880	cd06561, AlkD_like, A new structural DNA glycosylase. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity.	3.29539e-45
NZ_CP013242.1\|WP_045899017.1\|2635765_2636641_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.70485e-46
NZ_CP013242.1\|WP_045896447.1\|2651764_2653198_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.3262e-79
NZ_CP013242.1\|WP_045899016.1\|2640037_2640763_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	6.83076e-87
NZ_CP013242.1\|WP_096044645.1\|2659460_2660186_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	5.76671e-25
NZ_CP013242.1\|WP_045899009.1\|2646163_2646817_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.11886e-77
NZ_CP013242.1\|WP_096044642.1\|2653225_2653663_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.52356e-15
NZ_CP013242.1\|WP_096044644.1\|2656366_2658262_-\|endonuclease-MutS2	gnl\|CDD\|224114	COG1193, COG1193, Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair].	6.56226e-161
NZ_CP013242.1\|WP_096044636.1\|2638994_2640041_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	3.36711e-21
NZ_CP013242.1\|WP_045898909.1\|2660392_2660722_+\|tRNA-binding-protein	gnl\|CDD\|182232	PRK10089, PRK10089, chaperone CsaA.	1.42774e-62
NZ_CP013242.1\|WP_003384787.1\|2653835_2654324_-\|ferritin-family-protein	gnl\|CDD\|153104	cd01045, Ferritin_like_AB, Uncharacterized family of ferritin-like proteins found in archaea and bacteria. Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.	8.83986e-24
NZ_CP013242.1\|WP_085333116.1\|2642790_2643534_-\|M15-family-metallopeptidase	gnl\|CDD\|350624	cd14852, LD-carboxypeptidase, L,D-carboxypeptidase DacB and LdcB, and related proteins. This L,D-carboxypeptidase family includes LdcB LD-Carboxypeptidase from Streptococcus pneumoniae, Bacillus anthracis, and Bacillus subtilis, and L,D-carboxypeptidase DacB from Streptococcus pneumonia and Lactococcus lactis. These enzymes are active against cell-wall-derived tetrapeptides and synthetic tetrapeptides lacking the sugar moiety but are inactive against tetrapeptides terminating in L-alanine. L,D-carboxypeptidase DacB plays a key role in the remodeling of S. pneumoniae peptidoglycan during cell division. It adopts a zinc-dependent carboxypeptidase fold and acts as an L,D-carboxypeptidase towards the tetrapeptide L-Ala-D-iGln-L-Lys-D-Ala of the peptidoglycan stem. This family also includes vanY D-Ala-D-Ala carboxypeptidase which is vancomycin-inducible and penicillin-resistant. VanY hydrolyzes depsipeptide- and D-alanyl-D-alanine-containing peptidoglycan precursors; it is insensitive to beta-lactams. All these enzymes belong to the MEROPS family M15 subfamily B.	9.05478e-79
NZ_CP013242.1\|WP_096044643.1\|2654921_2656199_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|236722	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional.	3.50606e-162
NZ_CP013242.1\|WP_096044641.1\|2650419_2651244_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293799	cd07713, DHPS-like_MBL-fold, Methanocaldococcus jannaschii dihydropteroate synthase, Thermoanaerobacter tengcongensis Tflp, and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes Methanocaldococcus jannaschii 7,8-dihydropterin-6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate synthase (EC 2.5.1.15), a folate biosynthetic enzyme also known as dihydropteroate synthase and 7,8 dihydropteroate synthase. Thermoanaerobacter tengcongensis Tflp is a ferredoxin-like member. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	3.40024e-87
NZ_CP013242.1\|WP_043031458.1\|2636765_2637956_+\|coenzyme-F420-0:L-glutamate-ligase	gnl\|CDD\|376711	pfam01996, F420_ligase, F420-0:Gamma-glutamyl ligase. F420-0:Gamma-glutamyl ligase (EC:6.3.2.-) is an enzyme involved in F420 biosynthesis pathway. It catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0). This reaction produces polyglutamated F420 derivatives. GTP + F420-0 + n L-glutamate -> GDP + phosphate + F420-n.	1.56611e-41
NZ_CP013242.1\|WP_096044639.1\|2644846_2645839_-\|phosphodiester-glycosidase-family-protein	gnl\|CDD\|226979	COG4632, EpsL, Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Carbohydrate transport and metabolism].	1.61138e-84

>NZ_CP013242.1|WP_045899009.1|2646163_2646817_-|response-regulator-transcription-factor
MKKVLVVEDQIAIRELIAINLEMAGYEVTEASDGEMAVNYIENTYFDIILLDIMLPKLDGFSIISKIKGKGIPVIFVTAKDDVLDRVKGLKLGADDYITKPFESIELLARIEAVLRRCGKIEEVIKLKHLDIFPEQRLIKSKGEIIDITLKEYELLMLFIKNKNIALSREQILERVWGYDYFGETRTVDIHVLRIREKLNLKDCIKTVYKVGYRLED
>NZ_CP013242.1|WP_157672550.1|2645875_2646022_-|hypothetical-protein
MKKNISRVIVFIMIIIIILCVKEVLSDGDRDVGYANVVVKSWKKDIVQ
>NZ_CP013242.1|WP_096044639.1|2644846_2645839_-|phosphodiester-glycosidase-family-protein
MKIWKRIIFFVIFQLVFIMVTFPLYTFYGPFKKVRNVVVTSAMGTGNHRYIAKIFFSDKKINEIMKEDTESLNDNLNINNLNSKSVEIRNVNNDIKRMEINNSKFEGEALIIHDPKRVKVGYSSKLGQVGETTSDMAKRYKAVAAINGGGYSDVSPNGKTGGTGGTGGIPIGIIISKGKVVYPLNKEEYKKRENCVFAIDGEGYVHLEPASVEGLLNKNIKEAISFTPTLVVDGEPHISDNSLAGIHPRTAIGQKADGSIIFLVIDGRKGFKLGASIKDIQNIMLQLGAVNAMCLDGGGSTTMYYNNEVINRPSCVTGERAIPTIVYVES
>NZ_CP013242.1|WP_096044638.1|2643760_2644834_-|hypothetical-protein
MRKKKTKSKRKLKIICKWIIVSFVIQTGVLFYLSNYYFTDKTKVTFKTINQIELCNKNDITLPKGAKKINLSSSGRYATYYLENTLHVINLVNEKDNVVDLEKNLKDTFVKWYEAEDKLIILEKKEIDDKAAIKIYTYEAKDDLKQAVLDFNNKSRLYKLPTSTSKVDDIQLNTLNTIVYIKSSDYNSKNINRLDISAGIHKLPIDTDNIEDYYIIKQQDQVVFDNILNKKVFLFNSQETKEVVIDGVDKSKLLYVDNNGIVYIGQLDNDKVKAIYYKNYYEKDNNNWEKIQLEKPLEVKDIHIFSEEHIYYVDNINGMVINLKNKKKTKFTGEFVDMNCNSIMSLKDQKVVLSNLK
>NZ_CP013242.1|WP_085333116.1|2642790_2643534_-|M15-family-metallopeptidase
MIEKTLVKIFNNFIFFIVIIAILCVIEVWANKKNNNVGHANTIAKPENKHTRQQNKGRIRDNKKEILLVNRQNRLYETYLPKDLIVPNIRFISNGDPGVRKMRKVAGEALEKLFNAAETENIVLLGVSGYRNYNYQVNVYNNSVYRNGKQHADKYVAQPGTSEHQTGLAIDIVSNEYTNLDEIFVNTRAYKWLKENCYKYGFIIRYPKGKEDITGYKFEPWHIRYVGIDVATEIMNRNITLEEYCGK
>NZ_CP013242.1|WP_096044637.1|2641857_2642544_+|DNA-alkylation-repair-protein
MNKTIREQIFELADEEYQKFSSSLLPNTDNILGVRLPHLRKLAKAIAKEDWRKFMADYDSKYFEEIMLQGLVLSYAKADIEEILQYVADFVPKIDNWSVCDSFCAGLKFTKNNMERVWNFIQPFLSSNKEFEVRFGVVMLLDFYINDKYIDEVIKSLDAIKHPGYYTKMAVAWTISICYIKFPKQTMEYLKNNTLDDFTYNKSLQKITESLRVDKETKIIIKSMKKKL
>NZ_CP013242.1|WP_045899016.1|2640037_2640763_-|ABC-transporter-ATP-binding-protein
MTPSVVVSSVSKSFGKKLVLNNVNLSINKGQIYGLIGPSGSGKTTLVKIIVGMEAPDKGTIKMLNKNVPDLELLQNIGYMAQSDALYTELTAQENLKFYASLFKLNKKTMENRISYVINMVNLNNDLSKKVSTYSGGMKRRLSLAIALIQNPEILILDEPTVGIDPELRLNIWNELLRLKNEENKTIIVTTHAMDEAKKCDFLAMVRHGVILADGTPSELMKYYKANDLDEVFLKAGRKKI
>NZ_CP013242.1|WP_096044636.1|2638994_2640041_-|ABC-transporter-permease
MRIRALIKRISLQMLRDKRTLALLFVAPLLILTLMYFLFNSSTVNPKLGVVDLNKDMIETLKNGNINVIEYETASNEVIIKDKLDGLLEMDNKTLKLTLENSDPSKAKLLKMKINQAIASQSRVTNITLPVKFKTPTIDTNYIYGNSETTFFDVLSPILIGFFVFFFVFLISGIGLLRERTTGTLERLMATPIKRYEVVIGYLVGYGIFAVIQTLIVVLFSINILHIILAGSILNVILINLLLALVALSLGILLSTFASSEFQMIQFIPLVIIPQIFFAGILPLEGMPNWLQTIGKTMPIYYGADALKSIMYKGYNLNQITNDLLFLVIFASIFIILNIVALKKYRRL
>NZ_CP013242.1|WP_043031458.1|2636765_2637956_+|coenzyme-F420-0:L-glutamate-ligase
MERVVGTVVRGLRCPIINEGDCIEDIVVDSVLKASDVEGFEINDKDVVTVTESVVARAQGNYATIDQIAKDVKSKFGDDTIGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGNHLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVDYVEYYKSLIEEYGVECEVIFSNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLLGSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVAPAYTKGLDGTPNEVKLKYLADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK
>NZ_CP013242.1|WP_045899017.1|2635765_2636641_-|LysR-family-transcriptional-regulator
MISKLDLYRVFGCVGKCKSFSKAAKELYMTQPAVSQSIMQLEKELSIRLFTRTPKGVILTNEGEILFEYVTSAISLIEAGEKKMLDSKNLMIGDLKIGVGDTTSKYFLLSYLEEFHIKYPNVKLKILNGTTVELCNLVKTGDIDLAICNLPIEDSALEFKKCMEIQDIFVCGERFNKTISKPLSFVEISKMPLILLDGKSNSRQYVENYLLSKGVNISPEIELGAHDLLLQFAKINLGIACVVKEFSLEYLEQEILFEVKTEEPIPKRNIGFCYLKSVSLSPAARTFLETL
>NZ_CP013242.1|WP_096045384.1|2649238_2650234_-|helix-turn-helix-transcriptional-regulator
MVQDHELLNKIASIQKCDKEGYRTIYKMDCPNGVGTMKVYKVFTGIELIINEFESTTCLCNVPTYDNIIEINHCEEGRQECELSNGSYLYLGEGDLSINTMNNRAHTMGFSLKYYKGISVLLYLDEVARDVPEILQDICIDIYGLKEKFCINNECFVMRANDKIKNIFSELYYVPESVQKAYFKLKVLELLMFLNIIDVSKKRQGEYYSQQQVETIKQIKKLITEDFKHRYTIQELAKEYCISQTTLKTYFKGIYGTSMAAYMKKYRMKQAAVMLRETSNSVADIAISVAYQSQSKFAASFKEIIGISPFEYRKKCLAEAKTSHQEYIFLE
>NZ_CP013242.1|WP_096044641.1|2650419_2651244_-|MBL-fold-metallo-hydrolase
MKITVLVENNTSNPDCEPKHGLSLHIQTTHHCILFDFGPDGSTLLKNADVLGVDLSNVDAAFLSHGHMDHGGGLNTFLERNVNSMIYARPDAFSSHIIKAFGKDYAVGVEPSLINCSQIVLTKSSQIIDEELQVFSSPCGNVLKPMFNNTLYAEKNGVMVEDDFSHEQSLLITEGETTVLVGGCAHGGIVNLLNRAEELLGRPVDYVVSGFHLYDPPTKKTEPESRIDELAAKLSKHSTHYFTCHCTGETAFNRLHSLLGEQIGTLSTGEVIEL
>NZ_CP013242.1|WP_045896447.1|2651764_2653198_-|MFS-transporter
MVNRTKEETNAYKNNWIILAIVVMSPFMACLDSSIINVALPVMAKELSTSMAGIQQVVTSYLIVISAAILIFGRLGDIKGKTSVFKYGFIIFVLGSFLCGISTTLNFLIFSRIVQAIGAAMTMSTSQGIITHTFPPNERGRALGISGTSVALGTLLGPPLGGLIISVVSWEYIFLINVPIGLVAFIAAMKYLPKDKVKSKQSLDIKGAILFIICIVALFWAMLKGQQTGYNHINIIISFIVSLICFVVFIILELKIENPMLDLSIFKNRVFSVNIFSAFVMFIGISCINIIQPFYLQDVLKLSPGKTGLIMMAYPIVLSVIAPISGYLSDKMGSKKLTLAGIVVASIGLFCMAFLNEQSTFLMITLLLSVVALGNGLFQSPNNSLVMSSVEKTKLGIAGGVNALIRNLGFIFGVSISTTILYNRMSYKIGYRVLSYVEGRGDVFIYGMRWVYSIAAVACIIGFLVSLIDKTTLKSNR
>NZ_CP013242.1|WP_096044642.1|2653225_2653663_-|MarR-family-transcriptional-regulator
MKKRNLLNKYIAMIDRSSQGYLDEALKKYELSSGTYPFILALYDNEGINQNALSEYVKVDKALSARAIKKLIELGYVEKIINSKDARAYKLYLTEKAKAVVPEIRKASDGWLHIITNGLTEEEKETAECLLKNMYMNIKESKAKN
>NZ_CP013242.1|WP_003384787.1|2653835_2654324_-|ferritin-family-protein
MNKEELKTIKQAIINENEGYEFYKMVSKDTNSEESKKAFLELAEEELKHVKWLKDLFTKLKDNKMDSIDLKEIQVASPKIFAWENLDREGASKAVSVFGIGIQMERDSVDFYKKAAKDTEVQEAKVIYEELAKWEQSHLEQFYKEYETLMEEWWSEQGFEPF
>NZ_CP013242.1|WP_096044643.1|2654921_2656199_-|DEAD/DEAH-box-helicase
MLFENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGRDLVGCAQTGTGKTAAFAVPVLQNLSKDKKVNKNPRTIRALVLAPTRELAIQIGESFECYGKYINLKSAVIFGGVSQNPQTKVLREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLPKVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSLLKHLLKDESIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDIPETYVHRIGRTGRAGAKGVAISFCDIEETKSLKAIEKLIHKEIPVVEDHPYKIRHINEDEVSKENTKNNSNKRPSSKRQGGNWKYSNNRRKNNSTKQIKK
>NZ_CP013242.1|WP_096044644.1|2656366_2658262_-|endonuclease-MutS2
MNKETLEKLHYYELKEMIKEYCVSGLGKRLIDKLEPSSNIKIVNQRLDETSEGRRLLDVSYNIPLEGIFNVLPLIEKIEKGASLEPTDLTMMSNFLRGCRKVKLFIKDKEGYAPTLSAYGENICDLSYIEEEINRSIRGSVVDSNASKDLKKIRRNIDICESKIKEKLDKFLKNSANKEYIQEFFISQRDGKHTIAIKAAHKNKVQGTIVETSSKGTTVFMEPNVISKHTSELTVLKAEESVEEYKILATLTEMLFERIKDLKMNVDVISEYDMIWAKAKYSKVINGIKPKLNDYGYIKIIKGKYPLIKDSIPLDFEIGKDYRGLIITGPNAGGKTIVLKTIGLLALAIQSGFHIEAKEGTEFSVFKKLFVDIGDNQSVENALSTFSSHVKNLAEIIRESTKSTLLLFDEIGSGTEPNEGSALAIAILEELYHKGSITISTTHYGEIKNFSKEHPDFENAAMEFEKETLEPLYKLSIGKVGDSNALYISKKMGLYDSIIDRARKYMDTKSYNYNLIEDSKIIKNKELQAKEDFYDYSVGDKVILLENNESAIVYKERDRLNNVTILYNKEFIEVNYKRIKLELKASDLYPEGYDLNQLFISFRERKLEKDIKRGSKKALKRIKKETLKFSK
>NZ_CP013242.1|WP_045898911.1|2658783_2659170_-|VOC-family-protein
MNIRFNTITVKDLDESLKFYKEILGFIEIKRFNPMEGVTIAFLKDEDSGLIELIEYQNTSEDDDIRESIVSIGIGVVDLERTLNELKDKGVELIRGPIEVPSGEKFAFIKDPNGVEIELIQGFDILMS
>NZ_CP013242.1|WP_096044645.1|2659460_2660186_+|helix-turn-helix-domain-containing-protein
MNSIKCERRIYDYKFNTHSHSYAQLILPIHGVLYIETNYKKLPLEDEHLFFLPPDCKHTFGANKSNEFLVLDIPTNVLNKYDMEKMVGGKEFLFDNKWKAIRYLLLNEAANKKSSSSINDLFLYCYHFITDESIPDSIKYINEHFTEDIDLKKLAAIEHYNISYYSEWFKNKMKISPVEYIQNLRVKKAKEFLLNTDLTILQISQIVGYGHNSSFTRVFKHLEKTSPTEFRKKSKNKLRTI
>NZ_CP013242.1|WP_045898909.1|2660392_2660722_+|tRNA-binding-protein
MANFEDFMKLDIRVGEIIKVEFFGKAKKPAYKLLVDFGNEIGIKKSSAQITECYREEELVGKQVLGVVNFPPRQIADFMSEVLVLGIYSTQGVVLIQPQQPVKKGDKLG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NZ_CP013241.1	88052-88086	0	1.0

1. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to position: 88052-88086, mismatch: 0, identity: 1.0

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaagtatctagttttttatttat	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	213744-213778	0	1.0
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	225594-225628	0	1.0
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	169040-169074	0	1.0
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	68344-68378	0	1.0
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	210529-210563	0	1.0
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	188899-188933	0	1.0
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	213109-213143	0	1.0
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	37501-37535	1	0.971
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	774-808	1	0.971
NZ_CP013242_3	3.1\|927387\|34\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927387-927420	34	NZ_CP014218	Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence	3859-3892	1	0.971
NZ_CP013242_3	3.1\|927387\|34\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927387-927420	34	NZ_CP014173	Clostridium botulinum strain B609 plasmid pRSJ22_2, complete sequence	47207-47240	1	0.971
NZ_CP013242_1	1.1\|559981\|27\|NZ_CP013242\|CRISPRCasFinder	559981-560007	27	NC_014628	Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence	254972-254998	5	0.815
NZ_CP013242_1	1.1\|559981\|27\|NZ_CP013242\|CRISPRCasFinder	559981-560007	27	KM359505	Prochlorococcus phage P-TIM68, complete genome	24364-24390	5	0.815
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	98611-98645	8	0.771
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	121550-121584	8	0.771
NZ_CP013242_3	3.2\|927451\|33\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927451-927483	33	NC_001884	Bacillus phage SPBc2, complete genome	98287-98319	9	0.727
NZ_CP013242_3	3.2\|927451\|33\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927451-927483	33	AF020713	Bacteriophage SPBc2 complete genome	98287-98319	9	0.727
NZ_CP013242_3	3.2\|927451\|33\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927451-927483	33	MT601274	Bacillus phage vB_BsuS-Goe13, complete genome	89059-89091	9	0.727
NZ_CP013242_3	3.2\|927451\|33\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927451-927483	33	MT601273	Bacillus phage vB_BsuS-Goe12, complete genome	88813-88845	9	0.727
NZ_CP013242_3	3.2\|927451\|33\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927451-927483	33	NZ_CP014068	Enterococcus gallinarum strain FDAARGOS_163 plasmid unnamed, complete sequence	55555-55587	9	0.727
NZ_CP013242_2	2.1\|926947\|35\|NZ_CP013242\|CRISPRCasFinder	926947-926981	35	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	248133-248167	10	0.714
NZ_CP013242_2	2.1\|926947\|35\|NZ_CP013242\|CRISPRCasFinder	926947-926981	35	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	248173-248207	10	0.714
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	MK250029	Prevotella phage Lak-C1, complete genome	206070-206104	10	0.714
NZ_CP013242_2	2.2\|927012\|35\|NZ_CP013242\|CRISPRCasFinder	927012-927046	35	MK250019	Prevotella phage Lak-A2, complete genome	164898-164932	10	0.714
NZ_CP013242_3	3.2\|927451\|33\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927451-927483	33	NZ_CP043832	Bacillus sp. BS98 plasmid unnamed2	58337-58369	12	0.636
NZ_CP013242_3	3.2\|927451\|33\|NZ_CP013242\|PILER-CR,CRISPRCasFinder,CRT	927451-927483	33	NZ_CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	210675-210707	12	0.636

1. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaagtatctagttttttatttat	Protospacer
***********************************

2. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaagtatctagttttttatttat	Protospacer
***********************************

3. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaagtatctagttttttatttat	Protospacer
***********************************

4. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaagtatctagttttttatttat	Protospacer
***********************************

5. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaagtatctagttttttatttat	Protospacer
***********************************

6. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaagtatctagttttttatttat	Protospacer
***********************************

7. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaagtatctagttttttatttat	Protospacer
***********************************

8. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 1, identity: 0.971

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaactatctagttttttatttat	Protospacer
*************** *******************

9. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 1, identity: 0.971

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
ttgctttttataaaactatctagttttttatttat	Protospacer
*************** *******************

10. spacer 3.1|927387|34|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014218 (Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence) position: , mismatch: 1, identity: 0.971

cagtttatattaagaattttgtccttaggaataa	CRISPR spacer
cagtttatattaagaattttgtctttaggaataa	Protospacer
***********************.**********

11. spacer 3.1|927387|34|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014173 (Clostridium botulinum strain B609 plasmid pRSJ22_2, complete sequence) position: , mismatch: 1, identity: 0.971

cagtttatattaagaattttgtccttaggaataa	CRISPR spacer
cagtttatattaagaattttgtctttaggaataa	Protospacer
***********************.**********

12. spacer 1.1|559981|27|NZ_CP013242|CRISPRCasFinder matches to NC_014628 (Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence) position: , mismatch: 5, identity: 0.815

ctatggaaataggagtttcgtataaag	CRISPR spacer
taaaggaaattggagtttcggataaag	Protospacer
. * ****** ********* ******

13. spacer 1.1|559981|27|NZ_CP013242|CRISPRCasFinder matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 5, identity: 0.815

ctatggaaataggagtttcgtataaag	CRISPR spacer
catttgaaataggagtttagtataaat	Protospacer
*  * ************* *******

14. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 8, identity: 0.771

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
acactaggtataaaagtatctagtgttttttttat	Protospacer
 ..**   **************** **** *****

15. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 8, identity: 0.771

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
acactaggtataaaagtatctagtgttttttttat	Protospacer
 ..**   **************** **** *****

16. spacer 3.2|927451|33|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to NC_001884 (Bacillus phage SPBc2, complete genome) position: , mismatch: 9, identity: 0.727

aattataatttattagtaccaataatttgtcat	CRISPR spacer
gtatataatttagtagtaccaaaaatttcaaaa	Protospacer
.  ********* ********* *****   *

17. spacer 3.2|927451|33|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to AF020713 (Bacteriophage SPBc2 complete genome) position: , mismatch: 9, identity: 0.727

aattataatttattagtaccaataatttgtcat	CRISPR spacer
gtatataatttagtagtaccaaaaatttcaaaa	Protospacer
.  ********* ********* *****   *

18. spacer 3.2|927451|33|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to MT601274 (Bacillus phage vB_BsuS-Goe13, complete genome) position: , mismatch: 9, identity: 0.727

aattataatttattagtaccaataatttgtcat	CRISPR spacer
gtatataatttagtagtaccaaaaatttcaaaa	Protospacer
.  ********* ********* *****   *

19. spacer 3.2|927451|33|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to MT601273 (Bacillus phage vB_BsuS-Goe12, complete genome) position: , mismatch: 9, identity: 0.727

aattataatttattagtaccaataatttgtcat	CRISPR spacer
gtatataatttagtagtaccaaaaatttcaaaa	Protospacer
.  ********* ********* *****   *

20. spacer 3.2|927451|33|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014068 (Enterococcus gallinarum strain FDAARGOS_163 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

aattataatttattagtaccaataatttgtcat	CRISPR spacer
ttagataatttcttagttccaataatttataaa	Protospacer
    ******* ***** **********.* *

21. spacer 2.1|926947|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 10, identity: 0.714

cctcctagctaaaatctattgttatacctatttta	CRISPR spacer
taagttccataaaatctattgttataaatatttta	Protospacer
.   .*   *****************  *******

22. spacer 2.1|926947|35|NZ_CP013242|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 10, identity: 0.714

cctcctagctaaaatctattgttatacctatttta	CRISPR spacer
taagttccataaaatctattgttataaatatttta	Protospacer
.   .*   *****************  *******

23. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 10, identity: 0.714

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
aaatcttttttaaaagtatctacttttttatgttc	Protospacer
  ...**** ************ ******** * .

24. spacer 2.2|927012|35|NZ_CP013242|CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 10, identity: 0.714

ttgctttttataaaagtatctagttttttatttat	CRISPR spacer
aaatcttttttaaaagtatctacttttttatgttc	Protospacer
  ...**** ************ ******** * .

25. spacer 3.2|927451|33|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043832 (Bacillus sp. BS98 plasmid unnamed2) position: , mismatch: 12, identity: 0.636

aattataatttattagtaccaataatttgtcat-	CRISPR spacer
-gtacctttttattagtactattaaattataatt	Protospacer
 .*  .  ***********.* *** **.* **

26. spacer 3.2|927451|33|NZ_CP013242|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020434 (Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence) position: , mismatch: 12, identity: 0.636

aattataatttattagtaccaataatttgtcat-	CRISPR spacer
-gtacctttttattagtactattaaattataatt	Protospacer
 .*  .  ***********.* *** **.* **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4684 : 14728

uncultured_Mediterranean_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096043191.1\|4684_5953_+	protein translocase subunit SecD	A0A1B1IVP7	uncultured_Mediterranean_phage	6.2e-05	29.2
WP_096043192.1\|5954_6818_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	9.9e-39	39.6
WP_003483796.1\|7047_7926_+	DHH family phosphoesterase	NA	NA	NA	NA
WP_003490675.1\|8034_8553_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.3e-30	45.2
WP_003483798.1\|8677_10849_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	7.3e-14	38.4
WP_030036564.1\|10890_11340_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_045897596.1\|11393_11993_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.8e-23	33.0
WP_096043193.1\|12031_13462_+	coproporphyrinogen III oxidase	NA	NA	NA	NA
WP_096043194.1\|13480_14728_+\|tRNA	histidine--tRNA ligase	A0A2I2L577	Orpheovirus	1.9e-30	28.4

DBSCAN-SWA_2

18486 : 48135

Clostridium_phage(77.78%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003483806.1\|18486_18690_+	alpha/beta-type small acid-soluble spore protein	G3MAF8	Bacillus_virus	1.5e-09	43.7
WP_096043195.1\|19165_19315_-	hypothetical protein	NA	NA	NA	NA
WP_045896411.1\|19617_20028_-	helix-turn-helix transcriptional regulator	A0A0A7RUJ5	Clostridium_phage	1.0e-09	56.2
WP_061321068.1\|20220_20430_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_045896409.1\|20491_20704_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_172819784.1\|20796_21702_+	phage replisome organizer N-terminal domain-containing protein	A8ASN4	Listeria_phage	5.5e-40	40.4
WP_172819823.1\|21691_22492_+	ATP-binding protein	A0A2K9V3L7	Faecalibacterium_phage	2.6e-33	35.2
WP_096043198.1\|22548_22869_+	hypothetical protein	NA	NA	NA	NA
WP_045896408.1\|22985_23507_+	hypothetical protein	A0A0A7RVS1	Clostridium_phage	2.1e-36	50.0
WP_045896406.1\|24197_24482_+	hypothetical protein	A0A0A7S0R4	Clostridium_phage	1.0e-24	61.2
WP_096043199.1\|24481_24847_+	hypothetical protein	A0A0A7RW73	Clostridium_phage	7.7e-33	56.2
WP_096043200.1\|24851_25199_+	hypothetical protein	A0A0A7RU51	Clostridium_phage	9.5e-33	57.8
WP_045896404.1\|25204_25624_+	hypothetical protein	A0A0A7RU17	Clostridium_phage	1.2e-58	74.1
WP_072586302.1\|25628_26516_+	hypothetical protein	A0A0A7RTZ9	Clostridium_phage	4.5e-119	73.8
WP_045896402.1\|26530_26947_+	hypothetical protein	A0A0A7S0S0	Clostridium_phage	2.0e-45	69.7
WP_172819778.1\|26906_27149_+	hypothetical protein	A0A0A7RW80	Clostridium_phage	1.2e-21	67.6
WP_096043201.1\|27331_28873_+	hypothetical protein	A0A0A7RU22	Clostridium_phage	1.5e-29	37.4
WP_045895947.1\|28894_29275_+	hypothetical protein	NA	NA	NA	NA
WP_096043202.1\|29271_30801_+	hypothetical protein	NA	NA	NA	NA
WP_045895945.1\|30793_31156_+	hypothetical protein	NA	NA	NA	NA
WP_096043203.1\|31174_31720_+	hypothetical protein	A0A0A7RW86	Clostridium_phage	1.3e-73	73.1
WP_096043204.1\|31723_32704_+	hypothetical protein	A0A0A7RU61	Clostridium_phage	1.4e-110	61.3
WP_096043205.1\|32727_33966_+	hypothetical protein	A0A0A7RU28	Clostridium_phage	2.2e-201	83.5
WP_096043206.1\|33978_35823_+	hypothetical protein	A0A0A7RU09	Clostridium_phage	3.5e-134	62.7
WP_045896654.1\|35828_36083_+	hypothetical protein	A0A0A7S0T0	Clostridium_phage	6.3e-34	81.0
WP_096043207.1\|36094_37093_+	hypothetical protein	A0A0A7RW91	Clostridium_phage	7.2e-142	72.0
WP_096043208.1\|37104_38190_+	signal peptidase II	A0A0A7RU66	Clostridium_phage	3.8e-136	67.6
WP_096043209.1\|38325_39387_+	hypothetical protein	I1TJW8	Clostridium_phage	3.4e-65	54.4
WP_096043210.1\|39541_40612_+	hypothetical protein	I1TJW8	Clostridium_phage	4.5e-65	52.6
WP_096043211.1\|40767_41847_+	hypothetical protein	I1TJW8	Clostridium_phage	1.6e-65	53.5
WP_045898193.1\|42843_43098_+	hemolysin XhlA family protein	A0A0A7RTX0	Clostridium_phage	1.8e-12	48.1
WP_045898196.1\|43115_43310_+	hypothetical protein	NA	NA	NA	NA
WP_045898192.1\|43454_44225_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4J8A3	uncultured_Caudovirales_phage	6.7e-87	63.3
WP_045898191.1\|44365_45490_+	chorismate synthase	A0A291AU41	Pandoravirus	1.5e-31	29.8
WP_096043212.1\|45507_48135_+	DNA polymerase I	F8WQ35	Bacillus_phage	7.9e-63	33.4

DBSCAN-SWA_3

189239 : 198708

Synechococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172819786.1\|189239_191795_+	selenium-dependent xanthine dehydrogenase	A0A0P0IVM8	Acinetobacter_phage	8.1e-12	33.1
WP_045896706.1\|192471_192951_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.2e-27	48.7
WP_096043297.1\|192950_193655_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	7.8e-42	42.1
WP_096043298.1\|193745_195194_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.6e-57	34.4
WP_096043299.1\|195254_196250_+	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	2.6e-67	43.7
WP_096043300.1\|196377_196995_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.0e-25	41.1
WP_096043301.1\|197208_198708_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.6e-68	46.3

DBSCAN-SWA_4

1319713 : 1382212

Clostridium_phage(39.58%)

coat,tail,integrase,tRNA,bacteriocin,capsid,protease,portal,terminase,head

attL 1318674:1318694|attR 1381139:1381159

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1318674:1318694	attL	NA	NA	NA	NA
WP_096043921.1\|1319713_1320772_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_096043922.1\|1320849_1321728_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_043031910.1\|1321746_1322937_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003486026.1\|1322990_1323152_-	hypothetical protein	NA	NA	NA	NA
WP_042385544.1\|1323237_1324428_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_072584266.1\|1325018_1326671_-	recombinase family protein	A0A0A7RUB1	Clostridium_phage	4.6e-194	62.0
WP_072584267.1\|1326694_1327090_-	helix-turn-helix transcriptional regulator	A0A0A7RU96	Clostridium_phage	1.5e-37	64.5
WP_045895993.1\|1327310_1327535_+	helix-turn-helix domain-containing protein	A0A0A7S118	Clostridium_phage	2.0e-12	65.5
WP_155119526.1\|1327588_1327747_+	hypothetical protein	NA	NA	NA	NA
WP_167366070.1\|1327766_1327931_+	hypothetical protein	NA	NA	NA	NA
WP_072584268.1\|1327936_1328491_+	sigma-70 family RNA polymerase sigma factor	M9Q2I8	Clostridium_phage	3.9e-20	33.2
WP_045895992.1\|1328556_1328883_+	hypothetical protein	A0A0A7S0N7	Clostridium_phage	1.1e-09	41.8
WP_080490381.1\|1328883_1331139_+	AAA family ATPase	A0A1L2K2K3	Aeribacillus_phage	2.6e-99	39.3
WP_072584269.1\|1331159_1332086_+	recombinase RecT	A0A1L2JY28	Aeribacillus_phage	7.1e-59	47.3
WP_072584270.1\|1332087_1332804_+	MBL fold metallo-hydrolase	A0A1L2JY21	Aeribacillus_phage	2.9e-60	48.5
WP_155119527.1\|1332805_1332967_+	hypothetical protein	NA	NA	NA	NA
WP_052705773.1\|1332977_1333760_+	DnaD domain protein	A0A2P1JTY8	Anoxybacillus_phage	1.9e-36	39.1
WP_072587230.1\|1333719_1334523_+	ATP-binding protein	D2XQ17	Bacillus_virus	1.6e-43	40.1
WP_045895991.1\|1334554_1334794_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0K2CZ86	Paenibacillus_phage	2.0e-18	56.4
WP_045895990.1\|1334793_1335273_+	dUTP diphosphatase	A0A1L2JY27	Aeribacillus_phage	4.2e-15	40.8
WP_072584271.1\|1335300_1335477_+	DUF3797 domain-containing protein	A0A0H3UYX0	Geobacillus_virus	1.2e-12	54.7
WP_072584272.1\|1335588_1335750_+	hypothetical protein	NA	NA	NA	NA
WP_072584273.1\|1335746_1336169_+	DUF1064 domain-containing protein	A0A0A7RTV9	Clostridium_phage	5.5e-51	69.3
WP_072584274.1\|1336156_1336786_+	hypothetical protein	A0A0A7RW43	Clostridium_phage	1.8e-82	72.1
WP_072584275.1\|1336830_1337739_+	hypothetical protein	NA	NA	NA	NA
WP_045895994.1\|1337747_1338080_+	hypothetical protein	NA	NA	NA	NA
WP_045895987.1\|1338116_1338305_+	hypothetical protein	NA	NA	NA	NA
WP_003405269.1\|1338962_1340786_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.4e-88	37.4
WP_172819798.1\|1341038_1341233_+	hypothetical protein	NA	NA	NA	NA
WP_045896277.1\|1341315_1342311_+\|integrase	tyrosine-type recombinase/integrase	B9UDL9	Salmonella_phage	3.7e-05	26.1
WP_072584276.1\|1342343_1343171_+	DNA adenine methylase	A7YGL3	Campylobacter_phage	2.8e-30	35.0
WP_045896273.1\|1343213_1343657_+	hypothetical protein	A0A1C8E9B1	Bacillus_phage	3.0e-15	35.2
WP_072584277.1\|1343649_1343988_+	hypothetical protein	NA	NA	NA	NA
WP_155119529.1\|1344080_1344248_+	hypothetical protein	NA	NA	NA	NA
WP_045896270.1\|1344347_1344761_+	hypothetical protein	NA	NA	NA	NA
WP_072584278.1\|1345101_1345449_+	hypothetical protein	NA	NA	NA	NA
WP_045896268.1\|1345521_1345731_+	hypothetical protein	NA	NA	NA	NA
WP_045896266.1\|1345798_1346044_+	hypothetical protein	NA	NA	NA	NA
WP_045896264.1\|1346101_1346404_+	hypothetical protein	NA	NA	NA	NA
WP_072584279.1\|1346445_1346823_+	hypothetical protein	NA	NA	NA	NA
WP_155119530.1\|1346991_1347348_+	hypothetical protein	NA	NA	NA	NA
WP_045896258.1\|1347349_1347775_+	hypothetical protein	NA	NA	NA	NA
WP_072584281.1\|1347774_1348248_+	hypothetical protein	A0A0A7RUV1	Clostridium_phage	7.4e-12	37.1
WP_072587231.1\|1348518_1348983_+\|terminase	phage terminase small subunit P27 family	Q9ZXG2	Bacillus_phage	1.5e-49	63.0
WP_072584282.1\|1348979_1350680_+\|terminase	terminase large subunit	A6M948	Geobacillus_virus	2.5e-187	56.6
WP_072584283.1\|1350695_1351889_+\|portal	phage portal protein	A0A2I6PF26	Staphylococcus_phage	3.5e-66	37.8
WP_072584284.1\|1351869_1352538_+\|head,protease	HK97 family phage prohead protease	E2ELI4	Clostridium_phage	8.0e-36	46.5
WP_072584285.1\|1352548_1353700_+\|capsid	phage major capsid protein	A0A1B1P7R4	Bacillus_phage	4.3e-122	57.8
WP_155119531.1\|1353743_1353875_+	Rho termination factor N-terminal domain-containing protein	NA	NA	NA	NA
WP_045896253.1\|1353889_1354216_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBP7	Clostridium_phage	8.4e-15	50.0
WP_045896251.1\|1354196_1354523_+\|head	phage head closure protein	NA	NA	NA	NA
WP_072584286.1\|1354515_1354899_+	HK97 gp10 family phage protein	E2ELI9	Clostridium_phage	2.7e-28	50.0
WP_072584287.1\|1354895_1355237_+	hypothetical protein	A0A0S2SY15	Bacillus_phage	2.5e-17	42.6
WP_045896249.1\|1355239_1355821_+\|tail	tail protein	E2ELJ1	Clostridium_phage	9.9e-59	58.5
WP_072584288.1\|1355856_1356183_+	hypothetical protein	A0A0K2CZI8	Paenibacillus_phage	4.2e-06	34.6
WP_072584289.1\|1356438_1361745_+\|tail	phage tail tape measure protein	A0A0A7S163	Clostridium_phage	3.9e-77	38.8
WP_080490383.1\|1361761_1362628_+\|tail	phage tail family protein	E2ELJ6	Clostridium_phage	4.8e-110	69.6
WP_172819830.1\|1362628_1363699_+	hypothetical protein	E2ELJ7	Clostridium_phage	3.7e-120	58.8
WP_072584291.1\|1363698_1364472_+	hypothetical protein	E2ELJ8	Clostridium_phage	8.8e-79	60.2
WP_072584292.1\|1365496_1365796_+	hypothetical protein	J9QEB9	Clostridium_phage	4.4e-10	47.6
WP_072584293.1\|1365811_1366027_+	hypothetical protein	A0A2H4JGH3	uncultured_Caudovirales_phage	2.7e-09	67.4
WP_072584294.1\|1366202_1366499_+	hypothetical protein	Q332A4	Clostridium_botulinum_C_phage	9.6e-18	53.5
WP_072584295.1\|1366498_1367128_+	hypothetical protein	Q332A5	Clostridium_botulinum_C_phage	2.5e-71	65.1
WP_072584296.1\|1367180_1367384_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_021106364.1\|1367392_1367587_+	hypothetical protein	NA	NA	NA	NA
WP_072584297.1\|1367629_1368400_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4J8A3	uncultured_Caudovirales_phage	2.1e-88	64.8
WP_045896240.1\|1368696_1368897_+	hypothetical protein	A0A2H4J069	uncultured_Caudovirales_phage	2.2e-13	77.4
WP_061295793.1\|1368893_1369139_+	hypothetical protein	NA	NA	NA	NA
WP_061295790.1\|1369200_1369581_+	recombinase family protein	A0A2H4J078	uncultured_Caudovirales_phage	1.2e-28	55.7
WP_061295788.1\|1369869_1370070_+	helix-turn-helix domain-containing protein	A0A2H4J765	uncultured_Caudovirales_phage	5.0e-10	50.0
WP_167366071.1\|1370194_1370353_+	hypothetical protein	A0A2H4J4S7	uncultured_Caudovirales_phage	3.4e-14	73.1
WP_052705787.1\|1370481_1371033_+	hypothetical protein	NA	NA	NA	NA
WP_155119532.1\|1371166_1371316_+	hypothetical protein	NA	NA	NA	NA
WP_072584299.1\|1371312_1372539_+	hypothetical protein	Q331T3	Clostridium_botulinum_C_phage	2.0e-21	25.3
WP_072584300.1\|1372529_1373126_+	hypothetical protein	NA	NA	NA	NA
WP_072584301.1\|1373349_1373859_+	hypothetical protein	NA	NA	NA	NA
WP_045896231.1\|1373906_1374185_-	helix-turn-helix transcriptional regulator	A0A0A7S0F1	Clostridium_phage	2.3e-37	88.0
WP_045896228.1\|1374256_1374493_-	helix-turn-helix transcriptional regulator	A0A0A7RUG5	Clostridium_phage	4.2e-24	71.8
WP_096043923.1\|1374872_1376246_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_096043924.1\|1376323_1379125_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.0e-52	27.9
WP_096043925.1\|1379266_1381261_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.6e-68	31.2
1381139:1381159	attR	NA	NA	NA	NA
WP_096043926.1\|1381276_1382212_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA

DBSCAN-SWA_5

1748308 : 1754924

Clostridium_phage(50.0%)

integrase

attL 1749335:1749351|attR 1754970:1754986

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072584550.1\|1748308_1748707_-	ATP-dependent helicase	A0A1V0SAV1	Catovirus	3.3e-05	42.3
WP_072584551.1\|1748977_1749565_-	DUF4352 domain-containing protein	A0A0A7RUM7	Clostridium_phage	5.0e-10	33.0
1749335:1749351	attL	NA	NA	NA	NA
WP_045896982.1\|1749899_1750658_-	N-acetylmuramoyl-L-alanine amidase	I1TJX3	Clostridium_phage	6.4e-50	55.7
WP_003486633.1\|1750657_1750831_-	hypothetical protein	NA	NA	NA	NA
WP_003486634.1\|1750832_1751057_-	hypothetical protein	NA	NA	NA	NA
WP_003486635.1\|1751339_1751534_-	hypothetical protein	A0A0A7RU02	Clostridium_phage	3.9e-28	96.9
WP_030034659.1\|1751809_1751965_-	hypothetical protein	NA	NA	NA	NA
WP_096044139.1\|1751952_1752858_-\|integrase	tyrosine-type recombinase/integrase	A5X9F3	Aeromonas_virus	8.9e-06	27.7
WP_085333276.1\|1752911_1754924_-	ATP-dependent helicase	S5M596	Bacillus_phage	3.4e-66	30.5
1754970:1754986	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3109559 : 3117521

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096044880.1\|3109559_3110882_+	FAD-dependent oxidoreductase	S4VRT3	Pandoravirus	3.5e-27	28.7
WP_096045392.1\|3111286_3112327_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.5e-20	25.5
WP_045897047.1\|3112364_3113060_-	response regulator transcription factor	W8CYM9	Bacillus_phage	9.4e-40	38.2
WP_096044881.1\|3113133_3115095_-	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	3.9e-06	27.4
WP_172819844.1\|3115453_3116707_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.9e-38	33.6
WP_096044883.1\|3116843_3117521_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.2e-33	35.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013241

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP013242

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection