CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018099	Caldithrix abyssi DSM 13497 strain LF13 chromosome, complete genome	8 crisprs	DinG,csa3,cas4,PD-DExK,cas6,cas10,csm3gr7,csx10gr5,csx19,csx1,cas3,Cas9_archaeal,cas2,cas1,csm5gr7,csm4gr5,csm2gr11,cas5,cas7b,cas8b1	2	8	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018099_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018099_1

830993-831093

Orphan

Consensus_repeat	Method
GCCCGTAGGACGGGCTCGTCGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018099_1

>merge|NZ_CP018099|1|830993-831093|CRISPRCasFinder
GCCCGTAGGACGGGCTCGTCGAAAAGACGGGCGGGGGCGCCCACAGGACGGGCTGGTCGAAAGGACGGGCGGGAAGTGCCCGTAGGACGGGCTGGTCGAAA

>NZ_CP018099|1|1|830993-831093|CRISPRCasFinder
GCCCGTAGGACGGGCTCGTCGAAA	AGACGGGCGGGGGCGCCCACAGGACGGGCTGGTCGAAAGGACGGGCGGGAAGT
GCCCGTAGGACGGGCTGGTCGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018099.1\|WP_006928719.1\|820959_821709_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_CP018099.1\|WP_006928741.1\|840137_840704_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006928722.1\|825764_826565_+\|5'-nucleotidase,-lipoprotein-e(P4)-family	unknown	unknown	gnl\|CDD\|319836
NZ_CP018099.1\|WP_006928718.1\|820265_820928_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006928727.1\|828742_829579_+\|PSP1-domain-protein	unknown	unknown	gnl\|CDD\|224688
NZ_CP018099.1\|WP_006928728.1\|829559_830774_+\|L-2-hydroxyglutarate-oxidase	unknown	unknown	gnl\|CDD\|183292
NZ_CP018099.1\|WP_006928739.1\|838373_839000_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP018099.1\|WP_006928717.1\|819615_820269_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
NZ_CP018099.1\|WP_006928742.1\|840715_841249_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP018099.1\|WP_006928723.1\|826706_827474_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197319
NZ_CP018099.1\|WP_150109276.1\|835525_837436_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP018099.1\|WP_006928733.1\|833146_833860_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP018099.1\|WP_006928724.1\|827640_828741_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|379051
NZ_CP018099.1\|WP_006928730.1\|831353_831611_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006928720.1\|821810_823859_+\|BatA-domain-containing-protein	unknown	unknown	gnl\|CDD\|131281
NZ_CP018099.1\|WP_006928731.1\|831847_833131_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP018099.1\|WP_006928738.1\|837635_838370_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181668
NZ_CP018099.1\|WP_006928735.1\|833881_835516_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP018099.1\|WP_006928740.1\|839022_839994_-\|D-glycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240626
NZ_CP018099.1\|WP_006928721.1\|823905_825657_+\|ABC-ATPase-domain-containing-protein	unknown	unknown	gnl\|CDD\|370720

Protein	Function_ID	Function_description	E-value
NZ_CP018099.1\|WP_006928719.1\|820959_821709_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.93486e-17
NZ_CP018099.1\|WP_006928722.1\|825764_826565_+\|5'-nucleotidase,-lipoprotein-e(P4)-family	gnl\|CDD\|319836	cd07534, HAD_CAP, molecular class C acid phosphatases, similar to Haemophilus influenzae e (P4) acid phosphatase; belongs to the haloacid dehalogenase-like hydrolase superfamily. Molecular class C acid phosphatases (CAPs) are nonspecific acid phosphatases with generally broad substrate specificity and optimum activity at neutral to acidic pH. Members include Haemophilus influenzae lipoprotein e (P4), Elizabethkingia meningosepticum OlpA, Helicobacter pylori HppA, Enterobacter sp. 4 acid phosphatase PhoI, and Streptococcus pyogenes M1 GAS LppC. Lipoprotein e (P4) exhibits phosphomonoesterase activity with aryl phosphate substrates including nicotinamide mononucleotide (NMN), tyrosine phosphate, phenyl phosphate, p-nitrophenyl phosphate, and 4-methylumbelliferyl phosphate. The role of P4 in NAD+ uptake appears to be the dephosphorylation of NMN to nicotinamide riboside, which is then taken up by the organism. Elizabethkingia meningosepticum OlpA is a broad-spectrum nucleotidase with preference for 5'-nucleotides, it efficiently hydrolyzes nucleotide monophosphates, with a strong preference for 5'-nucleotides and for 3'-AMP; OlpA can also hydrolyze sugar phosphates and beta-glycerol phosphate, although with a lower efficiency. Helicobacter pylori HppA is also a 5' nucleotidase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.26449e-90
NZ_CP018099.1\|WP_006928727.1\|828742_829579_+\|PSP1-domain-protein	gnl\|CDD\|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	2.41674e-65
NZ_CP018099.1\|WP_006928728.1\|829559_830774_+\|L-2-hydroxyglutarate-oxidase	gnl\|CDD\|183292	PRK11728, PRK11728, L-2-hydroxyglutarate oxidase.	0
NZ_CP018099.1\|WP_006928739.1\|838373_839000_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	2.14055e-74
NZ_CP018099.1\|WP_006928717.1\|819615_820269_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	5.26755e-107
NZ_CP018099.1\|WP_006928742.1\|840715_841249_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	4.45921e-34
NZ_CP018099.1\|WP_006928723.1\|826706_827474_-\|exodeoxyribonuclease-III	gnl\|CDD\|197319	cd09085, Mth212-like_AP-endo, Methanothermobacter thermautotrophicus Mth212-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes the thermophilic archaeon Methanothermobacter thermautotrophicus Mth212and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Mth212 is an AP endonuclease, and a DNA uridine endonuclease (U-endo) that nicks double-stranded DNA at the 5'-side of a 2'-d-uridine residue. After incision at the 5'-side of a 2'-d-uridine residue by Mth212, DNA polymerase B takes over the 3'-OH terminus and carries out repair synthesis, generating a 5'-flap structure that is resolved by a 5'-flap endonuclease. Finally, DNA ligase seals the resulting nick. This U-endo activity shares the same catalytic center as its AP-endo activity, and is absent from other AP endonuclease homologues.	3.18328e-152
NZ_CP018099.1\|WP_150109276.1\|835525_837436_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	4.65277e-51
NZ_CP018099.1\|WP_006928733.1\|833146_833860_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.93555e-63
NZ_CP018099.1\|WP_006928724.1\|827640_828741_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|379051	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit. DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalyzed reaction. The delta subunit is also known as HolA.	3.14797e-61
NZ_CP018099.1\|WP_006928720.1\|821810_823859_+\|BatA-domain-containing-protein	gnl\|CDD\|131281	TIGR02226, hypothetical_protein-transmembrane_prediction, N-terminal double-transmembrane domain. This model represents a prokaryotic N-terminal region of about 80 amino acids. The predicted membrane topology by TMHMM puts the N-terminus outside and spans the membrane twice, with a cytosolic region of about 25 amino acids between the two transmembrane regions. Member proteins tend to be between 600 and 1000 amino acids in length. [Hypothetical proteins, Domain].	6.24814e-11
NZ_CP018099.1\|WP_006928731.1\|831847_833131_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP018099.1\|WP_006928738.1\|837635_838370_-\|SDR-family-oxidoreductase	gnl\|CDD\|181668	PRK09135, PRK09135, pteridine reductase; Provisional.	2.21272e-79
NZ_CP018099.1\|WP_006928735.1\|833881_835516_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	7.82051e-63
NZ_CP018099.1\|WP_006928740.1\|839022_839994_-\|D-glycerate-dehydrogenase	gnl\|CDD\|240626	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH). D-glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase, HPR) catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. In humans, HPR deficiency causes primary hyperoxaluria type 2, characterized by over-excretion of L-glycerate and oxalate in the urine, possibly due to an imbalance in competition with L-lactate dehydrogenase, another formate dehydrogenase (FDH)-like enzyme. GDH, like FDH and other members of the D-specific hydroxyacid dehydrogenase family that also includes L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase, typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form, despite often low sequence identity. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	0
NZ_CP018099.1\|WP_006928721.1\|823905_825657_+\|ABC-ATPase-domain-containing-protein	gnl\|CDD\|370720	pfam09818, ABC_ATPase, Predicted ATPase of the ABC class. Members of this family include various bacterial predicted ABC class ATPases.	0

>NZ_CP018099.1|WP_006928728.1|829559_830774_+|L-2-hydroxyglutarate-oxidase
MQQQNFDYDIVIIGGGIVGLATAYRLTQMTKARLAVIEAEERLAAHQTGNNSGVIHSGLYYKPGSLKAKNCVEGREALYQFCAEHDIPHERCGKLVVATAEEEIPRLKDLHQRGEANGLKGLMWLEKDDLKQYEPYVEGVAGLRVPETGIVDYTVVTEKLAELVRAAGHDVFLGHRFSGLEQHHSGLIVKTNRQNFKTRYLINCGGLHSDRIARKCGLKPDVRIIPFRGEYYKIKPEKRHLVKNLIYPVPDPEFPFLGVHFTRMIDGGVEAGPNAVLAFKREGYRKTSFSLRDTIETFTYPGFLRLAGKYLKTGLAEYYRSFNKKAFVKALQRLIPMVQMGDLEPGGAGVRAQALEKSGMLVDDFRIIEAPAMIHVLNAPSPAATASLSIGKTIAQMAKKNFDV
>NZ_CP018099.1|WP_006928727.1|828742_829579_+|PSP1-domain-protein
MTPEIIEIEFKGNKRVPYFNPKEIKVKPGDYVIVEADKGIDLGRVNKIGRLVALTNIKGEPKNIIRKAVPEDLQKLKENRKKEAEAFVVGREKIKKHNLNMKLVDVEYQFDNNKLTFYFTSDKRVDFRALVRDLAAKYRTRIELRQIGVRDEARRLGGLGVCGKPLCCSCFMQEFEPVTTQYARLQNLPLNTCKLTGVCGRLKCCLVYEKAFYEENLQKYPHIDSKIQTVRGEAIVEKIDIFKELIYLRFKNEEEADAIPLEKFQQITRETYYAAAEL
>NZ_CP018099.1|WP_006928724.1|827640_828741_+|DNA-polymerase-III-subunit-delta'
MEYFNRVVVQERVKKLFANSLQNGRLAHAYLFYGDEGRGKEAFALHLARALNCTSEEERPCGECPNCKRITHFNHPDIKFIFPAPKNIKHEQVKQIIQVKANNPYAALPLTDSKNISIDAIRELKEEAKFGAFEGGYRVIIITGAEYFSREAANSFLKLLEEPPDKFLIILITPALHAMLDTIRSRCQPVYFPEFDDEQIEQIVRQYEEVKQDIRPLTRMAHYNLKRIFQMLHTDYSEQKKWVLEFIRAVAVENYFHVNELLESIQSRRGQQAHLELLNLLTGWFTDTLHLQLDENFDRLINIDFAEPLRKFSKSYPQIKVSEIIERIEKAHKAIEGNAHPVITWMNLAIDIHGLLGPIRELKEAI
>NZ_CP018099.1|WP_006928723.1|826706_827474_-|exodeoxyribonuclease-III
MKLISWNVNGLRAVTRNGFIDQVKKLDADIICLQETKLQNEQIPEEILRLTDYHQYWNFAQRKGYSGVATFSRQEPAKIERELGIEKFDSEGRVLITHYDSFVLFNVYFPNGQRDHGRVAYKLEFYAELLKMANALRDAGNKVIITGDFNTAHREIDLKNPKSNQKTSGFLPEERAWIDRYLQEGWIDTFRHFYPQLKDQYTWWSYRFNARQRNIGWRIDYFMNSENLLPHLKQAFILPEVMGSDHCPLGIELAF
>NZ_CP018099.1|WP_006928722.1|825764_826565_+|5'-nucleotidase,-lipoprotein-e(P4)-family
MRRIMIIFSGLLILLASCQIKTKTNPNEHLVMATLYQQTAAEYRALCYQAFNLGRWQLQAMLDTLQSKKKPAVIVDIDETVLDNSPYEGYVIKTGYSYPAGWKEWVKAAQAEPVPGALEFLTFADRQGVDIFYVSNRRAENQAWTMKNLKKVGFPQVTDDHMFLRTITSSKEERRQAIQKTHTILLLFGDNLNDFASVFENKSIDDRFKAADEFRSQFGRRFIVLPNAMYGEWEGAIYNYNWSAKPAKKSQMRLNALRYFKMHDLQ
>NZ_CP018099.1|WP_006928721.1|823905_825657_+|ABC-ATPase-domain-containing-protein
MLTANDLHKRLQQIDGKGYKAYKELKGAYRYEKFMLFIDHVQGDPFAAPSKVRVRVSQKLAQIPLPLLRTTERRLGAGDALIRIIHQNIRRFARLQRGTGKSGLITIDVGGQEILPRSALILNEDFVEARMEMGLPARGRTILARQAQEMFFDELPQIIHHALFFEKLDRQYVTRFAHYTENFFGLQKQLKEKGLAAFVAENAILPRESGISQKPLPAEQAVPFKAPESLKVRLKLINPLNGKDFIEGCGIPRGITLIVGGGFHGKSTLLNALERGVYAHIPGDGREYVVTDPTAVKIRAEDGRRVEKVDIRPFINHLPGEKDAAQFSTDDASGSTSQAANILEALEVGAQTLLVDEDTSATNFMIRDARMQALVHKEFEPITPFIDRVREMYERFAVSTILVMGGSGDYFQVADTVIMMKEYCPYVATEEARQIAQKINAARNFEREFEWRSVTERIPLPESFDASRGKKEVKIEARGIHTIQFGRETIDLHHVEQLVDVSQTRAVGFALNFLSRRWMDGRRTIKELMQLLEEFWRENGLDRLNPFQKGDEHPGSFAQPRLFEMAAALNRYRRLKVKQKKSV
>NZ_CP018099.1|WP_006928720.1|821810_823859_+|BatA-domain-containing-protein
MFNFINGLVLPVIAAALIPLILHLLNRQKLKTLPFSSIKFLKELQSKRIRQVKIYQILIILIRMLFIVFLVLTFARPALNTFFSAPLSGARTTSVILLDNSLSMQTRSHVQSHFEKSVNILRKILNTFNESDHVAVITGDLDTGAPLQYNYNESFEFSQLKVSNFSFDLGHALLLARQWLEKFPNYNKEIIIISDGRIPRNVLSDSALSILKNVAARVYEINVSSPAQADINLSVDTAYVASRLIDLQQPVRVAAVVQNLGEEEKESSISLYDKQNRLAMQLVTIPPQSAKNVELFFSPHRASQYDLTLELDDDPLLADNHYYLSLNIPAEIRALYVQNRPGIEISAALQALSARTNLKITEVSAANWLAEPLSEYQLLVFDDPLNINEMQLGILSQFLNSGKSIIFIPGLSSSLSDYNHILERLVQKKPFLELVKSAAVGQFFTLKQTLAGNQLLEPVFRKKMTEVQWPHFYQYFKLRKAGDVLFEFSNGDPFVQMVKKRGRGNVFVLSSGLTGQWSDFPLRGLYIPFLHQLFALATHNAEEDNQFLIGQPVTITVPQIELQRNFQLQKPDEEVVSIIPEQTDFGLIFSFDGFAQPGHYRILQDGKLIKSFAVNLNAREWKRPFVKLESIRPDVVRLNAEDFSEKSLLKARLGRELWPVFLTLALLMLALEMWLIRKLEQG
>NZ_CP018099.1|WP_006928719.1|820959_821709_-|class-I-SAM-dependent-methyltransferase
MKETNRLQQVAPYSVLASIYDHVMSHVNYAMWANYIKALFKLAGRRISVIADLSCGTGSLLPHLRGYRRKALGFDLSLPMLKTANRKSSARHLICADFRQLPVKTHSLDAALALYDSVNYLHADRDALCFFNECYRTLRPGGLLIFDIVTPYLCKTAFKEYQESAVINENLRYDRFSFFDENENLQINQFKIWVNGQCYYEEHRQKIREVKEWILLIKQTNFKLLEIFSNFSMKPVMETSDRAHFVLRR
>NZ_CP018099.1|WP_006928718.1|820265_820928_-|hypothetical-protein
MISMVGWAAGFFVVILVAAYFILKAKEKNRLALFRVLTHLAIEDMSQPLGRLELENVQRRYNLILDTLKKAQNVAKKPAEKVKCEKLLKDLNDWRLQQIQAIYQEKLNGLLKQYHQSEDINRKLALLFEARQLIKEGILRESPLKKIDNLIIRLYVMQARSLAEGQPEQKKYEIFEDCITKIFNSDIDDKELDESAEFRKLIDEFEILHRKFKGKRSKPE
>NZ_CP018099.1|WP_006928717.1|819615_820269_-|cell-division-ATP-binding-protein-FtsE
MIEFYNVTLRIGQKEILKDISFRLFKGEFAYIVGPSGAGKSTVLRLIYMDLFPDEGMVIVGNHSSAKIKDHEIPYLRRELGVIFQDFKLLQDRNVYENVAFALRVAGVKGSAIKRRVLRVLSEVNIAHRRNLLPEKLSGGEQQRVAIARAIVNEPFIVLADEPTGNLDMQISMEIMEILERINRQGTAVLMATHDQSLIERFPHRVIRIENGRLVDE
>NZ_CP018099.1|WP_006928730.1|831353_831611_-|hypothetical-protein
MVKNPLKPHIPDSVFQFLIEHNLLREKGVRDFKIRNRFRELKRTYSTQEALEILQEEYPYLQYETIRKIIYQKSEPRSPEYFYLF
>NZ_CP018099.1|WP_006928731.1|831847_833131_+|serine--tRNA-ligase
MLDLKFIRENPETVKKGIQAKGEMGDVDRILELDQRRRQIIQEVENLKKQRNENSKKVAQYKKEGKDAAEIIEHTRQISETIKGLDEELKELEEQLSEQLSRIPNLPHPSTPIGTDASENVEVNQWGELPQFEFTPRNHLEIGERLDILDFKRGGKVTGSGFPVYKGDGARLERALINFMLDFHIEKHGYTEIFPPFLANRESMYGTGQLPKLEEDMYLAEKDDLFLIPTAEVPVTNLHRGEILDGADLPIKYVAYSACFRREAGSYGKETRGFLRVHQFNKVEMVNFVHPDKSYEFHEQLLREACEILEALELPYRVLLLCSGDLSFAAAKCYDIETWSPAEQKWLETSSVSNFEDFQARRANIRFRPEKGAKPMFVHTLNGSGLATSRLMVSLLETYQTDEGTVIIPEVLRKYMGGQDVIKRKYK
>NZ_CP018099.1|WP_006928733.1|833146_833860_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MLRTLLAYVFAVLHTLFCSLAAIVFGLFNPYSKIVDKIIRLWARGLLKAAGVKVVVHGQEKLRKDQPYIFMSNHQGAFDILAGVVAIPVTMRFIAKKELFRIPIFAHSMRTVGMIPIDRGNSAEARKSLEEAARTLQNGVSVLIFPEGTRTRDGNIKPFKKGGFVLALKSGLPIMPMVFTGSLNIMRKNSLKLHKGTIHVYFLDEVDTSQYSFEQRNELLKEVRKRIVDFYETVRLE
>NZ_CP018099.1|WP_006928735.1|833881_835516_-|diguanylate-cyclase
MNKNKIKILYIEDDPDARALMGDILRYQGYAYYEASRGLEGIRLAKKHKPDLIIIDLMLPDMQGSEVTTHLKSQPDLKSIPIIALTAAEEEDIREYVLAAGCDGYISKPININEFVFKIEEFLAGKRESVSPEFERELLQRYNINLVERLKRKVSELEQLNKNLTKLNQDLIASREELARYNDLLFYLNALANELRSLEDPEKMLRILPAKIVEGFAIDRCIVFRYDSEEFVISPFSLHGNFNTDSENLNFKMGRDLLALLKEERGLLWVKDAHQIKNPLLKKIADTLNSVSFVVGYLKEFGRKDISDSFVIEGETEELDAIFDIDERFLIYFDKCQTNKKFATYEIRILRSFLHTVAVIFENMLLFNQLKKLYKIKSEEAIRDGLTNVYNYRYFVRELRKEVARTKRYKTPFSLIMLDIDFFKTYNDLHGHLEGDEVLRAISRLLILNTRSTDIVARYGGEEFVIILPGIKKKEAVTFAEKLRRLIKDYQFPDKVHIVPCSLTISLGVASCPEDSDDPVNLVRLADQALYQAKQQGRDQVCVV
>NZ_CP018099.1|WP_150109276.1|835525_837436_-|SpoIIE-family-protein-phosphatase
MSTRKILETVFVYTIALILFVVFDLLLNRFTESPFLTFTVTIILLLLFQPYLLRFLKKILLPKTYFLTTKAQRILEKLNNDLNHATHFNEVASLLYQAFDELFSEQAFIFYIVEEDKYYPAHYHNVTDKELLAFDLKSEHLEGIPLQTLHIRKLEKTQLPREFIRIAHENNLNSLFAFRGHNQIFAFLLINPEQIFFFHEAEAWKIFEKIQKKAGLILENTALIVDLRNRNYQMRKLLEVGHKILSSFDIKQILDFILSVSRQVAHYDAAAIFLFDEHSGELKNISYDGYDPAIIENLHLKIGEGSIGWVVANKTIDVIDDVRKSDHYYRLRDETLSQCAIPLIFDDKVLGVICLESDRLSFFNEHLVELLQLFGQMAAIAIHNANQFKVMLEKQALEHELINAGHIQKALLVQRFPRIKGLDISAVNIPSKIVSGDLYDIIQYDEFTVGLAIGDVSGKGAPAAITMALALAGLRSQRQFFMTSCDIVYRLNNLLYESSVEGNYVSFFYALVSTQKKKIIFTNAGHNPPILLKNDGQIVWLKDGGIVLGFQPDIQFKQQELEFEHGDIILMYTDGITEAMNALEEEFGEERLIKLLKENRHLPVYELRQKIIDAVQNFSGKREHEDDITLVLCKFE
>NZ_CP018099.1|WP_006928738.1|837635_838370_-|SDR-family-oxidoreductase
MDINEKIVLITGGAVRVGRAIALELAARGAIICCHYHQSAAAAEELKKEIENKGGKIRLFRADLEQAKEAEELAEAVWQKTGRIDVLVNNAALFFKTPFGKVTEAEWDQFFNLNLKSVFFLSQKIGMRMLAQKSGKIINIGDSGAIHPFPSYIPYSISKAGVMALTTALAKALAPYVQVNCINPGPVLMPASFPQAEKQYAIDQTLLKREGSAYDIARTVRFLVEDSDYITGACINVDGGRAIR
>NZ_CP018099.1|WP_006928739.1|838373_839000_-|MBL-fold-metallo-hydrolase
MRIIKIPVGPFEVNCYIVVDEESNRCFLIDPGDEPEKIIKAIEEHHLTPTRVINTHNHIDHARHLYEIKQQFKIPFYIHEADLPLLEALKEQALFFGLNCSSVPEVDGFLEDGEEFEFGNQSVKILHTPGHSPGSVSVYLDGHVFVGDVLFKGSIGRTDLYGGNYNVLLESIKNKLLTLPEATVVHAGHGEDTTIGDEKRNNPFLRTM
>NZ_CP018099.1|WP_006928740.1|839022_839994_-|D-glycerate-dehydrogenase
MNNRFKVFVTKKIPQAGIQLLKQKGYQVTVHHGDIPISRTELEKAVAEYDALICLLSDTIDKEILSKARKLKVIANYAVGYNNIDVQEAAKRKIFVTNTPDVLTAATADLTWALILAVSRRVVEADRFLRKGRFKGWEPELLLGMEIKGKTLGIVGAGRIGQAVARRAVGFEMNIVYYSTQSKPAFEEETNARYLSLDELVTVADIVSLHCPLTPQTVHLLNKERIFAMKKGAILINTARGPVVDEEALVAALKKGHLFGAGLDVFEHEPEVHPELLKLNNVVLLPHIGSATVETRDEMARMAARNVISVLEKNEAVNPVNFF
>NZ_CP018099.1|WP_006928741.1|840137_840704_+|hypothetical-protein
MLIVSVLVAIIWGIFALYGSKESLTGTGNVRRLWYLLFYLLSGIVCLFLLQWQKSLFSIALGGFILLTGLHFLSIMEFRVLQKLINRAKHETENWIEGFPLYLVWLMYLAESKNNFTEKNLILSLFILFMAGFLQALFKLRRRMSILKWQNELTVTLTGMFLIINGLIAISGNVSFFLVIFEKILRIL
>NZ_CP018099.1|WP_006928742.1|840715_841249_+|TlpA-family-protein-disulfide-reductase
MSQNKALRIQFLLLLLISLSFAQNGNKIEVFSVKNLSDDNTVFEEYKGKITIINFWATWCAACLKEMPQLEKIYNEFKRDQVEVIGVAVMSDSNKIEKMIEVTGVTYPILTGDRKLLQKISNSLIIPQTIILNKEGKIVARFFGDQSYKTYRETILHYLEQSQLTGAPRTSLNYSQE

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Crispr_ID: NZ_CP018099_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018099_2

2441255-2442231

TypeIII

Consensus_repeat	Method
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	PILER-CR
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	CRISPRCasFinder
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	CRT

12 spacers

csx1,csm3gr7,csx19,csx10gr5,cas10,cas6

The CRISPR arrays of NZ_CP018099_2

>merge|NZ_CP018099|2|2441255-2442231|PILER-CR,CRISPRCasFinder,CRT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACTAAATTGACTGTTAGATTCCTGCAGTTCGTATCCGTTTTCCTGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACCCTATAACTGCTCATGCCCAGTCGTAGGCTCACCTGACTATCTGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACACTATCTTTATAGACCTGTCAGGAAAGGTCTGAATCTGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACATCCATCGTATAGTTCCTTTCAACTTAAGTTTAACAAATAAAGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACTTTGTTCTTATTGTATTGGCCATTGCGACCAAAGTTTTGAGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACCTTGCTTGAACGACTTTCATCTTTTGAATATTTCATTTTTGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACTTTATCTCCTGCCATTGACTCGAGCCATAGCGCAGGCAGCTACTGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACACTTATTGCGATAACCGCTATCGCTAATAGAATTAAATAAGGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACAAAAGAAATCTTCTAATTTCATGTTTATTTCCTTTCATCTTTGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACATTAATGGGACACTTTTGAATGTCTTGTCTCCAATCCTGACTGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACTTCACCGTAGCCGGGATTAATGGGACACTTTTGTAGGTCTTGGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGACTGGTTGTGGTTATAATAAGGATATGACGAGTTCCTCGTCATGTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC

>NZ_CP018099|2|1|2441255-2442153|PILER-CR
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TAAATTGACTGTTAGATTCCTGCAGTTCGTATCCGTTTTCCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	CCTATAACTGCTCATGCCCAGTCGTAGGCTCACCTGACTATCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ACTATCTTTATAGACCTGTCAGGAAAGGTCTGAATCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ATCCATCGTATAGTTCCTTTCAACTTAAGTTTAACAAATAAA
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTTGTTCTTATTGTATTGGCCATTGCGACCAAAGTTTTGA
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	CTTGCTTGAACGACTTTCATCTTTTGAATATTTCATTTTT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTTATCTCCTGCCATTGACTCGAGCCATAGCGCAGGCAGCTACT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ACTTATTGCGATAACCGCTATCGCTAATAGAATTAAATAAG
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	AAAAGAAATCTTCTAATTTCATGTTTATTTCCTTTCATCTTT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ATTAATGGGACACTTTTGAATGTCTTGTCTCCAATCCTGACT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTCACCGTAGCCGGGATTAATGGGACACTTTTGTAGGTCTTG
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC

>NZ_CP018099|2|2|2441255-2442231|CRISPRCasFinder
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TAAATTGACTGTTAGATTCCTGCAGTTCGTATCCGTTTTCCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	CCTATAACTGCTCATGCCCAGTCGTAGGCTCACCTGACTATCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ACTATCTTTATAGACCTGTCAGGAAAGGTCTGAATCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ATCCATCGTATAGTTCCTTTCAACTTAAGTTTAACAAATAAA
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTTGTTCTTATTGTATTGGCCATTGCGACCAAAGTTTTGA
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	CTTGCTTGAACGACTTTCATCTTTTGAATATTTCATTTTT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTTATCTCCTGCCATTGACTCGAGCCATAGCGCAGGCAGCTACT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ACTTATTGCGATAACCGCTATCGCTAATAGAATTAAATAAG
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	AAAAGAAATCTTCTAATTTCATGTTTATTTCCTTTCATCTTT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ATTAATGGGACACTTTTGAATGTCTTGTCTCCAATCCTGACT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTCACCGTAGCCGGGATTAATGGGACACTTTTGTAGGTCTTG
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TGGTTGTGGTTATAATAAGGATATGACGAGTTCCTCGTCAT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC

>NZ_CP018099|2|1|2441255-2442231|CRT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TAAATTGACTGTTAGATTCCTGCAGTTCGTATCCGTTTTCCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	CCTATAACTGCTCATGCCCAGTCGTAGGCTCACCTGACTATCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ACTATCTTTATAGACCTGTCAGGAAAGGTCTGAATCT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ATCCATCGTATAGTTCCTTTCAACTTAAGTTTAACAAATAAA
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTTGTTCTTATTGTATTGGCCATTGCGACCAAAGTTTTGA
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	CTTGCTTGAACGACTTTCATCTTTTGAATATTTCATTTTT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTTATCTCCTGCCATTGACTCGAGCCATAGCGCAGGCAGCTACT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ACTTATTGCGATAACCGCTATCGCTAATAGAATTAAATAAG
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	AAAAGAAATCTTCTAATTTCATGTTTATTTCCTTTCATCTTT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	ATTAATGGGACACTTTTGAATGTCTTGTCTCCAATCCTGACT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TTCACCGTAGCCGGGATTAATGGGACACTTTTGTAGGTCTTG
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC	TGGTTGTGGTTATAATAAGGATATGACGAGTTCCTCGTCAT
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTAAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018099.1\|WP_006930119.1\|2437633_2439280_+\|TM1812-family-CRISPR-associated-protein	csx1	pfam09455_csx1_CAS-III	gnl\|CDD\|378186
NZ_CP018099.1\|WP_006930123.1\|2444093_2447510_+\|tubulin-like-doman-containing-protein	unknown	unknown	gnl\|CDD\|372732
NZ_CP018099.1\|WP_150125329.1\|2459888_2462861_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP018099.1\|WP_006930120.1\|2439543_2441046_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|274251
NZ_CP018099.1\|WP_006930114.1\|2431542_2432097_+\|DUF324-domain-containing-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NZ_CP018099.1\|WP_006930132.1\|2467134_2469321_-\|glutamine-synthetase-III	unknown	unknown	gnl\|CDD\|226477
NZ_CP018099.1\|WP_006930125.1\|2449207_2452963_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930127.1\|2455192_2458069_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
NZ_CP018099.1\|WP_006929616.1\|2442603_2443836_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP018099.1\|WP_006930113.1\|2430048_2431542_+\|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl\|CDD\|274208
NZ_CP018099.1\|WP_006930131.1\|2465550_2466195_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_169833704.1\|2429016_2429736_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|187890
NZ_CP018099.1\|WP_006930110.1\|2426297_2428145_-\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|223953
NZ_CP018099.1\|WP_006930124.1\|2447519_2449211_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377167
NZ_CP018099.1\|WP_006930116.1\|2433643_2434984_+\|DUF324-domain-containing-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	gnl\|CDD\|377130
NZ_CP018099.1\|WP_006930126.1\|2452964_2455034_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|379234
NZ_CP018099.1\|WP_006930118.1\|2435416_2437558_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NZ_CP018099.1\|WP_006930130.1\|2463770_2465312_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143448
NZ_CP018099.1\|WP_006930115.1\|2432117_2433644_+\|hypothetical-protein	csx10gr5	cls000748_csx10gr5_CAS-III-D	gnl\|CDD\|187831
NZ_CP018099.1\|WP_006930117.1\|2434984_2435401_+\|TIGR04423-family-type-III-CRISPR-associated-protein	csx19	mkCas0123_csx19_CAS-III-D	gnl\|CDD\|275216

Protein	Function_ID	Function_description	E-value
NZ_CP018099.1\|WP_006930119.1\|2437633_2439280_+\|TM1812-family-CRISPR-associated-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	1.78764e-20
NZ_CP018099.1\|WP_006930123.1\|2444093_2447510_+\|tubulin-like-doman-containing-protein	gnl\|CDD\|372732	pfam13809, Tubulin_2, Tubulin like. Many of the residues conserved in Tubulin, pfam00091, are also highly conserved in this family.	1.43532e-69
NZ_CP018099.1\|WP_150125329.1\|2459888_2462861_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	1.26362e-09
NZ_CP018099.1\|WP_006930120.1\|2439543_2441046_+\|radical-SAM-protein	gnl\|CDD\|274251	TIGR02668, moaA_archaeal, probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666). [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	5.82151e-26
NZ_CP018099.1\|WP_006930114.1\|2431542_2432097_+\|DUF324-domain-containing-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	1.53293e-12
NZ_CP018099.1\|WP_006930132.1\|2467134_2469321_-\|glutamine-synthetase-III	gnl\|CDD\|226477	COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only].	0
NZ_CP018099.1\|WP_006930127.1\|2455192_2458069_-\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	1.31439e-35
NZ_CP018099.1\|WP_006929616.1\|2442603_2443836_+\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	2.80736e-81
NZ_CP018099.1\|WP_006930113.1\|2430048_2431542_+\|hypothetical-protein	gnl\|CDD\|274208	TIGR02577, thermophile-specific_DNA_repair_system, CRISPR-associated protein Cas10/Cmr2, subtype III-B. This model represent a Crm2 family of the CRISPR-associated RAMP module, a set of six genes recurring found together in prokaryotic genomes. This gene cluster is found only in species with CRISPR repeats, usually near the repeats themselves. Because most of the six (but not this family) contain RAMP domains, and because its appearance in a genome appears to depend on other CRISPR-associated Cas genes, the set is designated the CRISPR RAMP module. This protein, typified by TM1794 from Thermotoga maritima, is designated Crm2, for CRISPR RAMP Module protein 2.	4.98679e-08
NZ_CP018099.1\|WP_169833704.1\|2429016_2429736_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|187890	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex.	3.97059e-07
NZ_CP018099.1\|WP_006930110.1\|2426297_2428145_-\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|223953	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism].	0
NZ_CP018099.1\|WP_006930124.1\|2447519_2449211_+\|hypothetical-protein	gnl\|CDD\|377167	pfam03938, OmpH, Outer membrane protein (OmpH-like). This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery.	0.00015564
NZ_CP018099.1\|WP_006930116.1\|2433643_2434984_+\|DUF324-domain-containing-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	3.09681e-21
NZ_CP018099.1\|WP_006930126.1\|2452964_2455034_+\|VWA-domain-containing-protein	gnl\|CDD\|379234	pfam13519, VWA_2, von Willebrand factor type A domain.	3.56909e-05
NZ_CP018099.1\|WP_006930118.1\|2435416_2437558_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	1.51635e-87
NZ_CP018099.1\|WP_006930130.1\|2463770_2465312_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143448	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.	0
NZ_CP018099.1\|WP_006930115.1\|2432117_2433644_+\|hypothetical-protein	gnl\|CDD\|187831	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains.	1.91599e-08
NZ_CP018099.1\|WP_006930117.1\|2434984_2435401_+\|TIGR04423-family-type-III-CRISPR-associated-protein	gnl\|CDD\|275216	TIGR04423, predicted_protein, CRISPR type III-associated protein, TIGR04423 family. Members of this protein family occur only in species with CRISPR systems, in the context of type III systems that resemble type III-A (MTUBE) and III-B (the RAMP module). It occurs in several species of Prevotella, Helicobacter, Campylobacter, and Bacteroides.	3.85611e-48

>NZ_CP018099.1|WP_006930120.1|2439543_2441046_+|radical-SAM-protein
MHEARISITPFCNYKCFFCHNEGLAKKEGRKPQAQDLRFLISRLLDYGYNDLTFTGGEPFIYPDVLMETLNWLQNAHADRLPSVTIVSNGSLVQENHVVQILKYPKIKFHISLHTASDKNYQTITRQKRHSFSTILETLQLLAEYRAHFKINYVLLRGVNNSEPAIWSAVDLAARYCARAIKFLELLVMENNEWLYPYFFDVRSAEAIISKRALHLQTHNRRKVYRQKGLALDIELQQLTCKIGCAKCLENRDHTFSAALQYFPCMEASDVYYDLKNVALARAIKEGKKIIVNLAQKYGKRSPSLIQETRYTKSRKELFFSMAGANFELFLKKNNGRLLEQKQFNDWYYRPRTADSVWESKQRVIKIRQHVTDERRAKIIGCTVIMDEIEGLLFQRTLYLEKDREIYVCELENARKIMEALDMVCWFQNDLLLKVYLVDGAEVTASAVGGGTVIVGLNAQSFSSEIEMKAWLKKHGLETRGEKLLSLLQKFYRAVEKGLQ
>NZ_CP018099.1|WP_006930119.1|2437633_2439280_+|TM1812-family-CRISPR-associated-protein
MENLKKILITAIGAPKNYQQVTWDEKPDPIKTPFPFLAVASKWNVDHILLLGTKEALDQNREHYQQLLDELERFGLKNSLSAKEIGALNTRDEFWNAFTEVVSNRLFKREEIDLFIDLTFGYRVQPILIFLAAYFLRETRPNIHLKKVTYGIKEADPPHILDMTELIYLLDWLKAAQLFIHGGSAKELVLRIKTITNDQLPKFVESFEDFTNAYAFNYVSYLKKKSERFLTAKNKDVKKFLNENYPVYSQVEPFIHDFLKIFKNKDQLSLQLNIARRNFEEGAYARSVLILRECFITLFCKVLNQTKNKFRQKVELVLLNRVYFALFDEQKSIKLSVEENRLAQETFRILNEAIPEKELQRFYRLWGEIRDIRNAVGHIKNFNKGEEIDFVELKNYLDTILQESKTILLSFVSHLDTRPQVKHTLQNLLSEKEEKRLFVIVNEGIHPILPALRQKYGNNIKYKILTAGNVDLDMEKTVAQQCKKIAEEYHDYQIFLVPGGYSYLSITAYGVFQQSMGRHPIWLQYDPGQNRYVEKNLSPRRLLNGGGE
>NZ_CP018099.1|WP_006930118.1|2435416_2437558_+|TIGR03986-family-CRISPR-associated-RAMP-protein
MSVKSPYNFVPISNRVVAYEKPEQVLHDIPFSDGLSGYIEVKLITQTPIYIRNSGNNNNDFFNAHIGKNNTVSRIIPGTSLKGTIRNVLEIISFSKLNKVTDHRYSIRDLSYSKYQSKMTEKVAGVIHPKVKAGWISQMSTGNGIIWNLTPCKYARVELKDLETYYFNTYHNNVRLNDRMSSIVKYQRWGNNLNIQFDYKEGDYQHSPGKIHYKKVTTLGSGKYSGTIVFTGQPFRRNEKKRKGKHMEFIFFNDGKTSYDVTALKKDFEFIHSNENEEPNDEWKYWKKKLSIGEPMPVFYLEDESGNVESFGLAMMYRLPYPNKISDAIRNSNAKHFPKNNEKYIPDLSDMLFGFTHNINGKNLALKGRIQFGHLFETKESAQSTNALGPITKILGSPKPTFYPYYIQQKIDNNLQVPKKGNKYDYKTLMDNDVELKGWKRYPSENNQPDLNSMPAGNTTTTFEPIAKNAEFFGKIKFFNLRPFELGALLWAISFGNNSSCQHKIGMGKPLGFGRVLLETSDLKIFYDREAHDISYFLKEFENYMNHKIPNWSQTEQIKELITMADVSYRSNYASEYPILDPDTNTNEFVREIKNRGYALPKYSQDSSKDTNIKILSSEKIRQQKQVEQKKKEAISKNPEIDKILNLTNSELKGYIKDESISLHDKKVLFDVYPLLPKSKQKIIMDNLHKRKGAIFKILVALENQFGRTFPRN
>NZ_CP018099.1|WP_006930117.1|2434984_2435401_+|TIGR04423-family-type-III-CRISPR-associated-protein
MTWHKKLNNLSEIPDLNFEGYLWLSNEAAPRRINKINAAEYEKDGQPLNPFIREAYLYDVDNNVSVAVRHVPGRYLINFFDLKKLPEDFEITEQKFLANKKIGKKLIFKEIWAPESDDNCEGFAVLRKKVTVFCGIEI
>NZ_CP018099.1|WP_006930116.1|2433643_2434984_+|DUF324-domain-containing-protein
MNYRYCARILLEATTPLKIGTGEAGLITDELVATDANGLPVIPGTALTGVLRHSFKDESKIKNVFGFQEKKEGKGSRLIISNANFVGKDGEVIDGLADIDFSDEFYKNFKLLPVRDHTRITEKGVADSEAHGKFDEQIVYKGCRFVFDMELIGDKNDVALWQELLSKLRSPLFRIGSGTRKGFGELKIVRLDEEIFDLTNDVQKYMSRSAKLSVPKNEFKAKLVSDDQLITYELYLEAEDFFIFSSGYGDNETDTVVKKEPYIIWSDGKPTFTEEKILLPATSVKGAISHRTAFHYNRLAGYFADQIPVEDHKNYVGENNTAVRALFGFAKNSEEDENYGQRGRVIFSDLFVRAAGEKIFDHVAIDRFTGGAIDGALYNEKVVFTDENIILKIAVEKEALENDDKIMEAFECTLKDIATGMLPLGGNVMRGHGSFTGKVFKNGKDI
>NZ_CP018099.1|WP_006930115.1|2432117_2433644_+|hypothetical-protein
MKRLAFKLTLLTDVVVHADSATEGERKTLDFIPGSIFLGLVAKKYDDINNPYDIFHSNKVKFGDAHPALDEVRAFKAPLSWFVNKGEYLESERWVHHYLNDDITSTLIANAKQLKQIRHGWIIPQTPQAGVVMPLNKNFSIKSAYDRSKRTSAEGMLYGYKSLESGTEWMFYVDIDENIDEDFIKSGLVGHKHIGKSRSAQYGKVEIQEIKPNQPSWSTTELFEDKYLIIYAESRLAFFDEFGQPTLQPTAQHFHLDASWTLDWSKSQVMNSVYAPYNFKNRAFLTDRVCFEKGSVFVFKSENGGDYNPQLLKNGVGEYLNEGFGQIIINPTFLQADKKAKSTFSIRKANHSPQNNKVLSSVVTSDPAFDNRFSTWLSRKKLEFENEKYIYERVSNFVSENSRLFTGITPSQWGQVRAAAVSSKDFNEMMVWLFDNITPTSPDGITRSQDIANSGILMHGKTEKLWKKGRDILKNELQQVEIQKQVGREYAIVLATQMQKVAQKKESK
>NZ_CP018099.1|WP_006930114.1|2431542_2432097_+|DUF324-domain-containing-protein
MSKLTYKIDFFSDWHMGTGLSSGSDADLLVIKDKNGLPFIPGKTLKGLFKDAAKDLLDAHYLDTNFIREVFGVDSTENSDEESIPGKAFFSNAELSDNVKKLLKDNTTHIYRRISSTAIEKNGQAKEHSLRTFEVTVPLTLYATIENIPASVNIDTLIACMKMIKRIGTGRNRGFGRCEFSKHP
>NZ_CP018099.1|WP_006930113.1|2430048_2431542_+|hypothetical-protein
MAAFLYGASIQGIQKFIFETKKLKEIVGASELVEQMSNELFQKEFKINEDDMIMHAAGNVRLLSEDEHLIKNIVKTWPKIVGSKAPGLVLSQAVVKVEGTLNKSHFDLLEKRLRIARNRQFITQPVTPMASIRSRRTGKAAIDWNDDGKPRDCSSKVKQEIAGKDAKQNLMEKSLGENAKQFLNSFAMDVTHMMYKDEETGWLAVIHADGNNMGKLIQLISQKLEKNQSDFKDFFKKFSEILNKSTIAATEYAVNQIILPEKKNSKKLPFRPVVVGGDDLTIIIRADLALSFTEVYLKKFNEETTNNFKELAATFSLDELKNGLTACAGIAYMKDSFPFHYAVDLAESLCADAKKYAKQIDKVNVPSALLFHKVYDSFVDDYSEIEARELTAANGISFKYGPYGTDGRGLASINELKEQVELILRDDSPRSGIRKWLSLLHNDLNKANLWLERVKEITGAEFRKKLNLETAISSNKTHLFDVLTIASISKKRKGGKH
>NZ_CP018099.1|WP_169833704.1|2429016_2429736_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MFETFNSRNESVARPFVLEPPLTEKKLFPPGDTLKFNLILFGKAIEYFPLLVYTFKEMGKRGIGVKRGKFWLKQVTVSDQVVYDYQEQMIKTNFRRQNIFSIEKEQSKFLRIRFLTPTALKVKGKITNTIDFITLLKSIRRRIKALNVYHNGQLREVFDIDFEKAEEVKVKKSAIEEFRWERYSNRQQKKIDYSGFWGEMELEGDLTPFMAILRMGEIVHIGRGTVYGMGKYVIESVVS
>NZ_CP018099.1|WP_006930110.1|2426297_2428145_-|long-chain-fatty-acid--CoA-ligase
MQKMHLTTMILNQTQKHLDRAALFHKENHSWKSITWREMGKQITSVSSALLNWGVLPQERIGIYSQNRPEWTISDYGIMGVRGITTTIYATSSEIDLEYIINDAQIEILFIGGQEQYDKAIKILSENKTLKKMIVFDRSTKIQTDEKVIYFDDFIAQGLANYNAQALKQRLSEASPEDIATIIYTSGTTGRPKGVMLTQRNFFSQFKALDPLFNFSENDIELCFLPLSHAYQKSSTHWTQSHGVTVYYCENPKEVLDCFKEVRPTFMVGVPRLYEKMYAKVFATLENASGFKRGLFEWALEVGKEYQYKAFKKENISPYLRLKHTLARKLVLNKIRNIMGGRLNFFSAGGAPLSSEIEEFFFAAGIFIAQGYGLTETSPVVSCNRPDQFKFGTPGKVVNICQVKIAPDGEILVKGENVMKGYYRKPELTAEVLSPDGWFRTGDIGYLDSDGFLHITDRKKDIIITAGGKNIAPQPIESHIGKDYYIEQIALIGDKRKYITALIVPSFEALEEFAQKHDIKYDTLSELVKNEKVIQFYRQRLDELSKPLSAYERIKKFTLLSQPFSVEKGEITPTLKLKRKVIEKNYRDEIERMYSVDNGQAEDHQPQLLRQSAAL
>NZ_CP018099.1|WP_006929616.1|2442603_2443836_+|ISL3-family-transposase
MKDKELFKQILGLSHPWEVSKVDLDIANEEVEIEIIYKSKKGFCPECEVEYDIYDHREKRRWRHLDTCQMKTYIVCKVPRIKCKEHGVKTIKVPWAEKSSRTTLLFERFAIELLLASKNQSKTAQFLRISFDMLHHIMSKAVERGLSRRTEEDIKYIGIDEKSMKRGHTYVSVLSDSERRRVIDVSEGRTTSSASSLINKGLTEKQKEGLKAVSMDMWKAFIKAVQKELPNASKVHDKFHIMKYLNDGVDKTRREEARKLQKSNDKTLVKSKYLFLKNPENMTDKQLSRFRKIQELNLITSQAWAAKENFKEFFRSETINDAKFFFAEWYQDIKGRSLNKMIKVAKMLIAHSDGLLNYIRYQIDNSVAEWLNGKIQEIKTVGRGFRKFENFRIAILFFLGKLDLFPQESQ
>NZ_CP018099.1|WP_006930123.1|2444093_2447510_+|tubulin-like-doman-containing-protein
MNAQYKIPTILLGIGGTGGRIVDQLAGMYYRLEEEHRNNIPTEFLVLDTDVNDINRIKHIEPQKVFRISRNYSIKQYIELHNNGRDIEGWFPILYQYLHNKSVLEGAGQIRILGRLALYAMFEQPGFEERVASEIRNTLRQWHGQLGNLRIFLIGSICGGTASGILIPLTLWLHKEFNALHPQIKGVFFLPGIYTNAYNLPINQHERLRVNAYAALKEIENMFRFIYGLYDRDQNGLKPRPLHFDFHPQYRNFQITSNQQLFKMVYLVDFENMKNQHLVKRGEEYENLVIHGIFNQLYTPIASAQGSIEDNNIIQTLQTLGKQKLTNIYCTFGVAAVEYPYDDLLNYLAHQYSIRTISENWLKIDREFEARKKNYDMQRQQGILNLPELRLEKEYVSIFESFSQNDTFFNTISKRFNIQVEGTNLTVNQADHYIEALEKHLLNELRTNELYFNFAYKYARGIDAETLKEEADPADAIATFEQDFEEMRLKLNRPGDQVSDMVFRQSVLVGEETPDGQLLEIHLQNYIRKDSPHPIGVRYFLYKVMLNLESKIENIEKELLQLNDQFNWYQYKAFDDPETEEIENATMRFDRIRNSGLIKRMLKINKFLENYSNEASNHIHHLKKYMEEYALLKLFKRIYEEVDNIVEEYETFFDSLPTLIHLVQVKISELENMHDARQKNSFKHYIFASAELKRKLWEQEKFRLTTFNDPKINHEIYELLFKTYYNRYRSSFTLSRRRKIHSTYPHKFIDILIPRCVDVVRSSIGGNYNLNFAEIFRKRIELENPDMEPQEIERLYIQEIKMLLKSLFNRAEGFLQVVDDRNIQTMIFLGIHEDVLNYLRNTINDFDAFIQQEAGQQTISDNFFNNRIIQAYRVRYGITAKDMARFHFKDGEYYRAYQKCIKNIFQSDDPEVFPNDVLPHLDKNWHKYGYLPGIFEEEIDLYNRMKMTAITAGRLTDTINIQKSHRAQNEIIVRWQWPGELLQESFMKKISPSTFCMIHYWLDDHAGYIPRFLDEFKNWVFNSNTYDEKISHFLRVWKELMKSLQEERGNLDNQTFIYNLAKQLLPMYKYLVMNQEGISDDEKFKQFNAGLQKFSDLLNKNTKLHQDEKNNLTNMIESVNTADVKELETILTQSEILL
>NZ_CP018099.1|WP_006930124.1|2447519_2449211_+|hypothetical-protein
MHIHIINQNTESPLRAQGLLILFGLLKENPEKITILDETLKEWECATDEKLFSVVGLPRERHVEYLRLRILVGESQVNLWMLPSGKNNPDIINAIASDLKPINNSQQVINILLAQNYPSQNIQLPVVEFTDKKNLLIFIIALSQWLLNDQEIEDADKFNILEQLIPTQCWELIIEKGGLNPQEIYNAYEEIKQLASDEKEEKEIPDSFWQPVDTLAAPVNKEDCPMNTLNLNESQAALAIKNPHEASRLNDWFNSVREEILKNIKQNTHKLGECFQKRYEEIINKNDPLILQKNEIESIYTPQKYQTLFNEIERRQKNLEAEQKENLPINLFNEVQQKIEQLEQRMFQAVNTIKRTIPERNIVIPAALSILLTILFFGIPLFLTIPDARPPMEWKELKMDLVWLGALLLLISLFAVYIYKKEKKKIESEINALKNQLQAIQEKLTKLYEAHAKAHTLQMQLNILLQLKEKLLEHKQKMEVISQKKNAQMTLLNDWQTNIIRPLEEEINSVSKKKVVSQPSPLKVFLQNGAQNTNIEMTSDLIVSTARQNTLLIKLEKANNGSS
>NZ_CP018099.1|WP_006930125.1|2449207_2452963_+|hypothetical-protein
MSVDVILIAITLVILLMFFLIRSYRNPHLHFFPMIAALVIFSFSFWGAESFNELFNWLDRQLQIHLGIVLPAFFYNFAIWSVNLMLLILLLIVRWILIILEKILQRLTAHKLSFPAYYTYGIRYYLLKRFNGIKTVLTGGWIIISGFVLLGIYLSVNGTLNFFPLLLWAPLVAVVYEAAVYFSGEIRWIDMRLPISFEKPALRWIDTYNKIFSMYREHFDSHILYHLIYRKQYMKNTNQTKIISELQEQDVLITDPFNDRILSVIAETISYYLSHGKKVIVLSHHEHSLQEFYHSMNPVLENELYIYSRDIYFNQPLIDPLLMAYRIYFITFDKWEDWIDTDRWSALAANTGLMIVLHPGQMYPELHAQIAQIFKKSDLPERLRMLIIAEKWQNIEESVRLLYRRRRLLEVQSLQSNTFKRYLILWEGRQNYHQKVFLNVNYLPPPAILSLVPLHYGIPSIYWLDAGDFERDSIETLEGAIRQQNAQIKNLNNTSVNVDKFCLQSSWRVWRTGSSRFSFIFDRFFNLPFLLNYLEKHGALELEFINILSDQYLLRSYFLANLKYFLITPHQEALFPITTWPSTSVKQVLISLLRTLLHKSLTEPELESMFFYDKSFWDKVYKFIDPNSDKPFEYKAHKLNQLIAIFIENGNDTQLIKEHYQWDDQNQAYVKYFPVIQVKEDQLIPNKDFSFHLAGDTDKRELLFKHIITLDNIIYHLHLNQIIILHLPDQQKDDVKAYRIENIDVDQRKVFVQHQTPQSLQILIPSVEFRIEVNIPFEETSIIIQSKTVEYRQWLCRYTRKVRKVLKFVGEPTLLPKEFQILDAKNVYPQSLLEKNFPIARALSIHLQLKSAGSSHDFKRIAFTLSLLLQKMLKSLFPSAFPQLKVFSPQACNLLNQQKEEYPIGTGLHLLYPVVTDKGDKSFPVSGSIDIWILEESEIGLGVCEYLYNSKLSNLWDILEDFLCFMKENDVAADDLYFHVSGDERDQFPYDFDGTLEIVSELNANNANSLKQRRALWDTARADHFHIINLPDRLQAGVECDFCGIKIGEKSYTELEDGRTLCEECQKTAVMTEDAFKKIMKTVYRDVEQYFSIRLPKIAQISVINTADLQQVLGKTFIPTPQYDPRVVGVAIHQQDDFIIMIENGAPYWNTYLTFVHEITHIWQFISLKNLNEIPLELLEGHTTYVEYALAQWYLRKREDEILQRIKVQLDTRRQQQGDVYGVGLQYFLQHVPNNYNPYFYMLELFGRQEY
>NZ_CP018099.1|WP_006930126.1|2452964_2455034_+|VWA-domain-containing-protein
MRHKILYYTFIYFLLMSGAGRAAEEGQWIGVIYDNSGSMEKAERHHITAYAFKLFTALLMPEDTLAIITMSEVSANPNARPRVFYTSRKQQILNYIDGLNYRSATPVETIRQMLRYFQLKDKKQKSLMILTDGVFEPEPNINLAQYLSPEENLVAGYLILNPNPNLLREIERQNVLPTLLEIINGSRNKGCFFVHHHREIPERLGELFAFATGKSLKGQEAFVQVEGKRLRIKSPFPMRSVRLIYQSTYSRVVQISRVNFPSRKELYHQALPGANLSAISGILFFNNVIPPDSTIEITFNHPLLRENLFLFLDTTLDLQLTVHNATLGPVAPIDQIYAVGAGDSLWLEGVFSFQKKPYQFSPSLLKRLKFQAQIRGGEKIDFQTTDRLLFKTPPFVLQPTTSGAVVIDVSAIFPGHFHLQRKLIFNTAPIHSRILINGQLWHDSLYTSIPRHKLDSIPPLNITVVTEKGDTVTSDFNIKISTHPEIKRLINKKGNLITVMFDNYFFPWKDPDRNVYLQINAVPKSRLYTAHQKSLQIKITPGSFWQHWKTFILTILSILVIIKCLYCWLFVPRFPPRARISYRRKSKAGYQNPITRKLHRRSSYLFCWRERRKLAGISFLANNRRSILIDRKFAREKENIQVNGITLKEASKDGKKHILVNTNTEIKIYHSNGDTTNIQFRPNGKFSAR
>NZ_CP018099.1|WP_006930127.1|2455192_2458069_-|TonB-dependent-receptor
MRFNLILKLLISQFTIFFLLLNFSAAFAGPQPTGRVIGKIVDKETGDPIVGANVYLENTVLGAASDLEGNFLIDRVPAGNYTLIVSVIGYAETRINNLKVTPETVARVNVILQPEVLTTDVIEVEAKAVTNTEASLLKIREKSIAISDAISSEAISQAGSGNAAEALKQVTGASVGDDNNIFIRGLGDRYISTWLNGAGLPSSDPYKKTASIDLIPSNLVDNIITLKSFTPDKPGDFSGGAVNIKTKDFPGSFQFYSSFSLAFNPQVTHGSSALGFNVGRMGWLGMNDGTLDLPDVFKDQNLKIPSIAEANQDETGALARQIEDLTRSFNRELGPTAFTPPMNRSFSFSLGNQVRLFSRPLGYLASFTYNRSYSGYSDGVFRRWNQGTQDVMTTVFDLKENKTEQNILWGGLLNFSYKLTDNQVISFNGIYNKNGEIIARTLAGSYPYDMDESRIFQARVLNFKERTLINGQIKGAHYVPQFFNSRIEWVFSAGKTIEDQPDQRYFNSYYDTKKQSFGIKDNTPPSRYFRYLDEDQNQFFIDYKLPFKQWSGLKSTFKTGFYHLQKDRNYSERLFQMVDHQGYNYDGDPNDLLNDENIGIVDTLITTIRGVEYRSYDWGIVVQESTLPGNNYSANQKINASYVMVELPLYDKLRFIGGVRYEVTDMNLVTNDSTAKKGEIKTKDWLHSVNFIFSLMPRMNLRASYSRTLARPTFREIGPFATFDFMGGDVYIGNPDLKRSTIDNIDLRWEWFMNPGEVLALSAFYKNFKDPIERVFNSFEENTWKNVDFARAYGVELEVRKNMSILSKHLKYLLLGANVSFIKSRVNISEEELALIHNLRPDADDHRPFQGQSPYLINLNVTYSNPQMGLSTTVYYNIFGDRLSKVSYGGTPDVYEKSAGLLNVSAKMRLFNQLSLKVSGKNLLNPTFEKYQEFKGKKYIYNQFKRGRVFSVGLSYSI
>NZ_CP018099.1|WP_150125329.1|2459888_2462861_-|T9SS-type-A-sorting-domain-containing-protein
MIRFTVKSLILMMMVASFMFSTNTYAGDEFFEKVDYRGAFGATDWASGWTALYHYGVLAEPTTGTNDVIVNDDDIQPGDVVYWTADNVYHLNGRVFVEEGAVLHIEAGTVIKGMPGQGENASALIVARGGKIYAEGTADRPIIFTAESDDVNNPVDISYDTKGLWGGVIILGKATINRPGGEYNIEGIPTTEPRGLYGGNDDDDNSGVFRYVSIRHGGAEIGEGNEINGLTMGGVGRGTVIEYVEVFANKDDGFEWFGGTVNAKHLIAAFCGDDGFDMDEGYRGKLQFLFAIQHPEFGNRCAEHDGAPKSAVNSEPKAFATIFNATYLGSGKNANNPDNDEMFKLRENWGGIYANSIFGDYNGYGVDVSDAYSPDDSKDRLLNGELKFLNNIWFDFNGYTMADSIGKQDYIQNYLQNAVNGNEEVNPQLNGISRVQDGQLDPRPAFNGPAYQNLAQYPNDEFFEKVDYRGAFGATDWASGWTALYHYGVLAEPTTGTNDVIVNDDDIQPGEVVYWTADNVYHLNGRVFVEEGAVLHIEAGTVIKGMPGQGENASALIVARGGKIYAEGTADRPIIFTAESDDVNNPVDISYDTKGLWGGVIILGKATINRPGGEYNIEGIPTTEPRGLYGGNDDDDNSGVFRYVSIRHGGAEIGEGNEINGLTMGGVGRGTVIEYVEVFANKDDGFEWFGGTVNAKHLIAAFCGDDGFDMDEGYRGKLQFLFAIQHPEFGNRCAEHDGAPKSAVNSEPKAFATIFNATYLGSGKNANNPDNDEMFKLRENWGGIYANSIFGDYNGYGIDVSDAYSPDDSKDRLLNGELKFLNNIWFDFNGYTMADSIGKQDYIQNYLQNAANGNEEVNPQLNGISRVQDGQLDPRPAFNGPAYQNLAQYPTAIRVINNTFSIPDNFALKQNYPNPFNATTVIHFDLNKAGNVKLVVYDQLGRKITTLVNKTLSAGSYQIQWNANNLASGVYYYQLQLNDRVETRKMILNK
>NZ_CP018099.1|WP_006930130.1|2463770_2465312_+|aldehyde-dehydrogenase-family-protein
MFDRSILEKLGIKEENFGACTGLEWSKTTDAGVLEVHSPIDGKLIARVYQASAEDYERVVQKAEEAFKYWRTIPAPRRGEIVRQIGLRLREYKDLLGRLVTYEMGKSIQEGWGEVQEMIDICDFAVGQSRMLYGFTMHSERPNHRMYEQYHPLGPVAIITAFNFPVAVWAWNAMIATVAGDTNIWKPASKVPLTAIAVQNIVGEIVKENDLPEGLFNLVIGKGSVIGERILEDKRIPLVSLTGSTAVGRHAATKISARLGKYILELGGNNAIILTPDANLELAVPAIVFGAVGTAGQRCTTTRRLIIHESIYDRVKESLIKAYKSVRIGNPLDDKIHMGPLVDKGAVDTYLKALEQVKAEGGKIIYGGEVLTGPGYEAGTYVLPTLVEAENHYQIVQEETFAPILYLIKYKGSVENAIEIHNDVVQGLSSSIFTNNLQEAETFLSAWGSDCGIANVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKAYMRRQTNTINFGKELPLAQGIKFEI
>NZ_CP018099.1|WP_006930131.1|2465550_2466195_-|hypothetical-protein
MRTAALIILTILLAFNMTLAQKPDSEFHVGIYIGPSLPQGEYAETNGDKSGYAQNGIGAMVELRKNIHKATWVSSLIFSSNSTDANAMQDQLFEMGLVADDHFSVWAMTGLSLRKALSENVFIYGSGLFGLLFSNYPDIYTTDGFTKTTYTYSSTTTLGYGLGAGLSVFKMNLAIRYCMASPTYERSGDWLGLNGDKKLTIPADNLFILFGYEF
>NZ_CP018099.1|WP_006930132.1|2467134_2469321_-|glutamine-synthetase-III
MPSVREQIALELITPSPRTYEQLKPFQFGENTFNDRVMREKLPKDVYKKLIKTIKAGEKLDLSIANSVAHAMKEWAISKGVTHFTHWFQPQTGLTAEKHDSFYEVESDGQIIERFKGDQLVQGEPDASSFPSGGMRATFEARGYTMWDPSSPAFIVEGPNGGGILCIPSVFISYNGEALDKKTPLLRSMDAINRSGLALLKLFGNKTATRVVPTVGTEQEYFLIDKRFFNLRPDLRVAGRTLLGAEPPKGQQLEDHYFGSIKERVLAFMQDAENELYRLGVPAKTRHNEVAPHQFEIAPIFAEMNIGADRNQLIMEVLKRVAARHGLALLLHEKPFKGVNGSGKHNNWSLSDSQGNNLLDPGKTPEENLQFLVFLVSVLKAVNDYGDLLRASIASAGNDHRLGANEAPPAIMSVFLGERLTEILDDIKAGKEIKRTEEFIIDLGISQLPSILRDNTDRNRTSPFAFTGNKFEFRAVGSSASISMPNIFLSAAVADSIDIIIKDIQKELEKGTEFKAAVLSVLRKFIIETERIRFEGNNYSKEWEEEAEKRGLPNIKRTGYALAALIDPKNVAMLERQKVFSREELEARYHIKLEQYVKTLDIEADTICDMIQTKILPAAVEYQTRLAVAIKETHAVASVTNGLGLEILIDSLNKINATISELHQECQKLKALLKEGLTIEDIEKQARFFADRIVDQIEATRRPADQLEAIIPDELWPLPKYSEMLFML

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Crispr_ID: NZ_CP018099_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018099_3

2540277-2540549

Orphan

Consensus_repeat	Method
TTGTCGGAAAGTACCCCGTTATTCAGAGGGGATTGAGACT	PILER-CR
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	CRISPRCasFinder
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	CRT

3 spacers

The CRISPR arrays of NZ_CP018099_3

>merge|NZ_CP018099|3|2540277-2540549|PILER-CR,CRISPRCasFinder,CRT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACAATCGACCCATCAACCATCGAAGAATATCCATTCTAAAAGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACGATAACGATATTGCAGGTATCAAAAAAGCGGACAAAGTATACAGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACCAGACCTTAAGCCCGGTGCGGCTCCGCCTATGTGCGGGGCGTGTCTCAATCCCCTCTGAATAACGGGGGAATTATTTGTT

>NZ_CP018099|3|2|2540277-2540471|PILER-CR
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACAAT	CGACCCATCAACCATCGAAGAATATCCATTCTAAAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACGAT	AACGATATTGCAGGTATCAAAAAAGCGGACAAAGTATACA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACCA

>NZ_CP018099|3|3|2540277-2540549|CRISPRCasFinder
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	AATCGACCCATCAACCATCGAAGAATATCCATTCTAAAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	GATAACGATATTGCAGGTATCAAAAAAGCGGACAAAGTATACA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	CAGACCTTAAGCCCGGTGCGGCTCCGCCTATGTGCGGGGCGT
GTCTCAATCCCCTCTGAATAACGGGGGAATTATTTGTT

>NZ_CP018099|3|2|2540277-2540548|CRT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	AATCGACCCATCAACCATCGAAGAATATCCATTCTAAAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	GATAACGATATTGCAGGTATCAAAAAAGCGGACAAAGTATACA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	CAGACCTTAAGCCCGGTGCGGCTCCGCCTATGTGCGGGGCGT
GTCTCAATCCCCTCTGAATAACGGGGGAATTATTTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018099.1\|WP_006930184.1\|2548243_2550037_-\|family-16-glycosylhydrolase	unknown	unknown	gnl\|CDD\|185684
NZ_CP018099.1\|WP_044281310.1\|2536090_2536375_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_071961276.1\|2550415_2550817_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930183.1\|2546619_2548221_-\|sodium/solute-symporter	unknown	unknown	gnl\|CDD\|271363
NZ_CP018099.1\|WP_006930186.1\|2552507_2553485_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|223156
NZ_CP018099.1\|WP_006930182.1\|2543825_2546459_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|178177
NZ_CP018099.1\|WP_006930173.1\|2526633_2528973_+\|DUF1939-domain-containing-protein	unknown	unknown	gnl\|CDD\|236518
NZ_CP018099.1\|WP_150109373.1\|2553671_2554772_+\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|107206
NZ_CP018099.1\|WP_006930180.1\|2540573_2540927_-\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|274132
NZ_CP018099.1\|WP_006930179.1\|2537743_2538265_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930175.1\|2533552_2534017_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367427
NZ_CP018099.1\|WP_006930176.1\|2534013_2535084_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930185.1\|2551283_2552495_+\|YgeY-family-selenium-metabolism-linked-hydrolase	unknown	unknown	gnl\|CDD\|183836
NZ_CP018099.1\|WP_006930191.1\|2554832_2556305_+\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223110
NZ_CP018099.1\|WP_006930174.1\|2531018_2533529_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|224389
NZ_CP018099.1\|WP_006929573.1\|2525356_2526589_+\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP018099.1\|WP_044281307.1\|2529203_2530190_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP018099.1\|WP_006926671.1\|2536481_2537714_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP018099.1\|WP_006930181.1\|2542314_2543808_-\|DUF92-domain-containing-protein	unknown	unknown	gnl\|CDD\|376674
NZ_CP018099.1\|WP_006930177.1\|2535279_2535999_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239313

Protein	Function_ID	Function_description	E-value
NZ_CP018099.1\|WP_006930184.1\|2548243_2550037_-\|family-16-glycosylhydrolase	gnl\|CDD\|185684	cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16. Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure.	6.76537e-54
NZ_CP018099.1\|WP_006930180.1\|2540573_2540927_-\|four-helix-bundle-protein	gnl\|CDD\|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	1.08235e-25
NZ_CP018099.1\|WP_006930183.1\|2546619_2548221_-\|sodium/solute-symporter	gnl\|CDD\|271363	cd10329, SLC5sbd_SGLT1-like, Na(+)/glucose cotransporter SGLT1 and related proteins; solute binding domain. This subfamily includes the solute-binding domain of SGLT proteins that cotransport Na+ with various solutes. Its members include: the human glucose (SGLT1, -2, -4, -5 ), chiro-inositol (SGLT5), and myo-inositol (SMIT) cotransporters. It also includes human SGLT3 which has been characterized as a glucose sensor and not a transporter. It belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_CP018099.1\|WP_006930186.1\|2552507_2553485_+\|ornithine-carbamoyltransferase	gnl\|CDD\|223156	COG0078, ArgF, Ornithine carbamoyltransferase [Amino acid transport and metabolism].	3.89277e-127
NZ_CP018099.1\|WP_006930173.1\|2526633_2528973_+\|DUF1939-domain-containing-protein	gnl\|CDD\|236518	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed.	2.70852e-62
NZ_CP018099.1\|WP_150109373.1\|2553671_2554772_+\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|107206	cd01563, Thr-synth_1, Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.	2.97622e-97
NZ_CP018099.1\|WP_006930182.1\|2543825_2546459_-\|leucine--tRNA-ligase	gnl\|CDD\|178177	PLN02563, PLN02563, aminoacyl-tRNA ligase.	0
NZ_CP018099.1\|WP_006930185.1\|2551283_2552495_+\|YgeY-family-selenium-metabolism-linked-hydrolase	gnl\|CDD\|183836	PRK13004, PRK13004, YgeY family selenium metabolism-linked hydrolase.	2.42571e-175
NZ_CP018099.1\|WP_006930175.1\|2533552_2534017_-\|hypothetical-protein	gnl\|CDD\|367427	pfam03266, NTPase_1, NTPase. This domain is found across all species from bacteria to human, and the function was determined first in a hyperthermophilic bacterium to be an NTPase. The structure of one member-sequence represents a variation of the RecA fold, and implies that the function might be that of a DNA/RNA modifying enzyme. The sequence carries both a Walker A and Walker B motif which together are characteristic of ATPases or GTPases. The protein exhibits an increased expression profile in human liver cholangiocarcinoma when compared to normal tissue.	8.7919e-10
NZ_CP018099.1\|WP_006930191.1\|2554832_2556305_+\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	1.21974e-39
NZ_CP018099.1\|WP_006930174.1\|2531018_2533529_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	4.90719e-86
NZ_CP018099.1\|WP_006929573.1\|2525356_2526589_+\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	2.35268e-81
NZ_CP018099.1\|WP_006930181.1\|2542314_2543808_-\|DUF92-domain-containing-protein	gnl\|CDD\|376674	pfam01940, DUF92, Integral membrane protein DUF92. Members of this family have several predicted transmembrane helices. The function of these prokaryotic proteins is unknown.	1.29307e-67
NZ_CP018099.1\|WP_006926671.1\|2536481_2537714_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	2.49128e-82
NZ_CP018099.1\|WP_044281307.1\|2529203_2530190_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	0.00101826
NZ_CP018099.1\|WP_006930177.1\|2535279_2535999_-\|peroxiredoxin	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	3.57512e-87

>NZ_CP018099.1|WP_006930179.1|2537743_2538265_-|hypothetical-protein
MVQTKHIFTIKDSTPFLTQRVVSEYDDQMNERTRLIYKNADQLLLVVKKEFNIRQSVTRSSTFDGQGRLKSIVAYEYDRRGNLIGKKFFNKNREIISRQLWKFDAHEKKLTLYEKYGLEERLLERKVFEYQNGNLSSVKIFTPGPDAFRLKRYFYDKEGREIEEKILALLGFL
>NZ_CP018099.1|WP_006926671.1|2536481_2537714_-|ISL3-family-transposase
MKDKELFKQILGLSHPWEVSKVDLDIANEEVEIEIIYKSKKGFCPECEVEYDIYDHREKRRWRHLDTCQMKTYIVCKVPRIKCKEHGVKTIKVPWAEKSSRTTLLFERFAIELLLASKNQSKTAQFLRISFDMLHHIMSKAVERGLSRRTEEDIKYIGIDEKSMKRGHTYVSVLSDSERRRVIDVSEGRTTSSASSLINKGLTEKQKEGLKAVSMDMWKAFIKAVQKELPNASIVHDKFHIMKYLNDGVDKTRREEARKLQKSNDKTLVKSKYLFLKNPENMTDKQLSRFRKIQELNLITSQAWAAKENFKEFFRSETINDAKFFFAEWYQDIKGRSLNKMIKVAKMLIAHSDGLLNYIRYQIDNSVAEWLNGKIQEIKTVGRGFRKFENFRIAILFFLGKLDLFPQESQ
>NZ_CP018099.1|WP_044281310.1|2536090_2536375_-|hypothetical-protein
MQRTEKFEYYADGTIKSEEVDDLFGNQYFRKKFDVIGDVLEAYHHKKGFFENLEIYQYDNDGKKIKQEKYSIKISKKTLKQQIFYDYKAGKINF
>NZ_CP018099.1|WP_006930177.1|2535279_2535999_-|peroxiredoxin
MAEKSGGCARPTGARVGEPQQTPELNDQQPMVEEETFMTAKVGNKAPDFTAPAYYKGEFTEIKLSDYLGKWVLLCFYPGDFTFVUATEIAAVAANYDTLQKLGVEVISVSVDSQFVHKMWNDHEISKMIDKDIPFPMVADGAGNVGKVYGVYDENAGVELRGRFIIDPDGVIQAMEVLTPPVGRNIEETIRQVQAFQHVRATKGAEACPSGWQPGKKTLKPGPALVGNVWKEWLPKNDL
>NZ_CP018099.1|WP_006930176.1|2534013_2535084_-|hypothetical-protein
MFSEEKRQLFLNRLTALWALNEAGLGGLMHALRIPFTGIFIGGTAVVLITLIAYFARPDFKRILKSMLIVLIIKALVSPHSPINAYVAVIFQGLAGFALFTVFSSNLKAAAFLLAMITLIEGAVQKILVMTIIYGASLWEAIDLFISYLLKRFASVNLDFSASLAIISAYFILHIMGGFLIGLLCIKFLKLMEQLPDRFAHLPQIDLSARTMNIEKGKKKGKYKKFIHLSVLLFFIIGTLTLFSTKDGLLQGMLVFFRVFALILLWYLFLGPFLIKRLHRFLNTKSKLYANEIEHIHDILPSLKQIVFILWQDSAKYIYLKRWKYFLVNLILVSLTLEMDQPQAKAVSTSTTGESS
>NZ_CP018099.1|WP_006930175.1|2533552_2534017_-|hypothetical-protein
MIYLLTGVVRSGKTTRLLEWSKNRRDVAGILTPDRRQRRVLLDVRTGSEHPFQVQSKAESVISIGRFTFSARTFEIGRAILKREREADCRWLIIDEIGPLELRGKGFEPEVEATIRFFKNHAPQRNLILVIRDTLKDAALKHYGLTDPVIFNFP
>NZ_CP018099.1|WP_006930174.1|2531018_2533529_+|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein
MISRLIFLLTLTAATLFSQSANIDRQIEELLSKMTLEEKASYIGGTKGFYLRAIPRLGLPEVKMSDGPLGIRGSGKSTAFPATIALSATWNRALAYKVGQAIGLEARAKQIGILLAPAVNIYRAPMCGRNFEYFGEDPFLTAEMAVQYIKGVQSNKVAATVKHFAANNQEYDRHWVGSNVDERTLREIYFPAFKAAVQKGGALAVMAAYNPLNGIHCSEKAWLLNEVLKKEWGVEGLVMSDWGAVHSERAIEAGLDLEMPEARFMTAEKIIALIKKGELDEKILDDKVRRILRVCLTMDLFNANRSKPTIDWDEHHDLAVQVAREGMVLLKNDDDLLPLKPEKIRSLVVLGPTAYPTPTSGGGSAFIKPYRTISFYEAIKNTAGSQTQVDFINTERYLSMDRLVEQGRFFVDSDLSEPGLKAIFFNNMELRYPPIYRRVDQKIAFDFGTLSPAFGVRSSGYSIRWRAYIKPEKTGKYVFATESDDGVRVYLDGTLIIDNWTDHAVQKDVKEVRLVAGKVYDLRLEYYNNKGQGLIRFGYGLIDETPLAQKMARVKEYDAAIVCVGFNSELEGEGHDRPFSLPQKQVDLIQQVARRNSNTIVLLTAGGGVDFLPWIKKVKAVLHAFYPGQAGGEPAADILFGKVNPSGKLPFTIEKRLQDGAAFNYYYPAAVDTPVYSADFSGNPQNIDYGEGIFLGYRHFDKYNLEPLFPFGFGLSYTRFDFDDLELSGKVIRPDGRLTVRCKITNKGKMAGAEVVQLYLKKEVDVVTVEKALKGFQKVELQPGESNIIEFEILPEHLQVFDHLKKQWEVKAGKYQVLVGSSSRDIRLKGKFLVKP
>NZ_CP018099.1|WP_044281307.1|2529203_2530190_-|T9SS-type-A-sorting-domain-containing-protein
MSVLKSSLIILLFSCTIFAGTPVIDGIFDGEAVWGQPVHVADGIPGFAEANAKKIYVTDDENYIYFGAEVSAAKWMSWAFIVNTKSGGGSYDSWSRAIDYAHADLPDYAPRGHFGGSGDQDINYAELNYWTGTSWDGYVGLEQSEFADTISVNHVVDGWIEIRILKSEMGTPDVGDVQFYITGDNNNHGNFDSCPDDDTAYDWDMSANHNILDTYQMNVPLNSVPAALSENSVQDIDFRLLGNFPNPFNPCTTIRFTSKANASILLSIYNTRGQKIFSEERQFSGAGQHDWQLSLNQLGRDLTSGIYFYSLTDRASGQRQNGKMILIK
>NZ_CP018099.1|WP_006930173.1|2526633_2528973_+|DUF1939-domain-containing-protein
MRRVLLGLALVLLFSFANLFANPWNGRIVLQGFWWDYWNNNYPNNWATYLADLAPRLSEMGIDYVWIPPTVKNHSTSSNGYAPFDHYDLGDKYQKGSTSTRFGNKDEFLRAVAVLHANGLRVIQDVVWNHLANAGSNTGAGGSDPAAWGNTWKNFRYVCYATPVTDESEADYFNRQGRFFKNWQNFHPNPDHNQNDDDWTGEFWGPDLCYYQGAYGQSSNCTYNPEQSPDYVRNGMRTWNIWLKKQTGIDGYRIDAAKHFPYWATKDFLWNLQHDAGWASGGDTMFAVGEYVGSKSEMDTWVDNVNNSDGFSDVVGTMDFSLRQALRDMVYSFGSYDMGTIPSAQQDRRTRTVPFVNSHDTFRPILDSNGNYSGWDTYNELGGGHIDPYEPRVEVAYAIAFAVDGSPSVFFEDLFDIGANGNRWDHHPNDPNELPARDYLVNLIWCHQKLNFKDGEYKVRWQAQDLLIIERSARAIIGANDSWDQWQSATITTDFAPGTVLKDYSGANSGTITVDNNQQVTIWVPPCDGSNIRRGYCVYGPDGISGPVTHQVRTTTQEWEMADDLGDSHEWSLGQGGRLPSYSTALRTIGKIWSEAGEQVTIEVYPEDAAQSYTLRIYNDQNQQMASFTHTGAGTFYFTPTYQEWLTLKIRNTDSNTPGQKVWVKATYLGPQVIDQGASLVGEQGVIYDFRLFNNYPNPFNPSTTLAFEIPKAGQVRLVIYDLNGRLVKTLFDSRVAQGRHQLQWDGTNFNGDALPSGVYFARLIFDGKTRTQKLVLLK
>NZ_CP018099.1|WP_006929573.1|2525356_2526589_+|ISL3-family-transposase
MKDKELFKQILGLSHPWEVSKVDLDIANEEVEIEIIYKSKKGFCPECEVEYDIYDHREKRRWRHLDTCQMKTYIVCKVPRIKCKEHGVKTIKVPWAEKSSRTTLLFERFAIELLLASKNQSKTAQFLRISFDMLHHIMSKAVERGLSRRTEEDIKYIGIDEKSMKRGHTYVSVLSDSERRRVIDVSEGRTTSSASSLINKGLTEKQKEGLKAVSMDMWKAFIKAVQKELPNASIVHDKFHIMKYLNDGVDKTRREEARKLQKSNDKTLVKSKYLFLKNLENMTDKQLSRFRKIQELNLITSQAWAAKENFKEFFRSETINDAKFFFAEWYQDIKERSLNKMIKVAKMLIAHSDGLLNYIRYQIDNSVAEWLNGKIQEIKTVGRGFRKFENFRIAILFFLGKLDLFPQESQ
>NZ_CP018099.1|WP_006930180.1|2540573_2540927_-|four-helix-bundle-protein
MKADDLEKRLIDFSVKVINICKIMSEDYISRHLSVQLLRSATSVAANYGEARGAESRKDFVHKLRICLKELNETTIWLKIIEGSNFIEEKDIRILLSESKELQKIIGSSLSTLKQSK
>NZ_CP018099.1|WP_006930181.1|2542314_2543808_-|DUF92-domain-containing-protein
MDWNSFLTAPQPADLILAVGAFLLILLILLISVWLKKILDLSHEVVRKFSHMGIGVLAALAPLYFSTPLLLLLLSLLFLTVNWVAVKKGLLKSIHSGRYSFGTVYFPLVYMILILIFWNIDRRFILLGIALFAIADALAALVGQRWGKSTSFTLVADQKSLLGSIAMFISSFALIYLILKFSFEVDRLLVLQVIALAALVTVVEALSSKGSDNFFVPFSGAVLAFLLVNFNEAQLNRFLSGEILALITAILSYRFRFLSLSGSAMVFLLATVIFGFGGWAWSVPILTFFILSSLLSKLGKNTKNQFKDTFEKSGVRDYAQVLANGGIGGALVILNALFPDRMWYQLYLLSLMVATSDTWSTEIGVLSKSNPRLITTFRKVKPGISGAVSLLGTAGGFLGSALILLSGLFFTELNGRVILWLLLLGLLGNLLDSLIGATVQGQYQCSVCGKYTEKKMHCDRETSLISGSKIIGNDMVNVASNLMAIILMVIIYYFHVL
>NZ_CP018099.1|WP_006930182.1|2543825_2546459_-|leucine--tRNA-ligase
MAYPFGKIEKKWQKFWEEQKTFKTEDKFDQPKYYVLDMFPYPSGAGLHVGHPEGYTATDIMARYKRMKGFNVLHPMGWDAFGLPAEQYAIETGTHPRITTERNIERFRKQLKAIGFSYDWDREVNTTDPKYYKWTQWIFIQLYKKGLAYLDEVPVNWCPALGTVLADEEVINGRSERGNHPVYRRPLKQWVLKITEYADRLLEDLELVDWPESTKEMQKNWIGRSEGAEVEFPVVGLDEKIEVFTTRPDTLFGATYMVLAPEHPLVEKITTEEYRAQVQAYQKQAAQKSDLERTELQKDKTGVFTGGYAINPVNNEKIPIWVADYVLISYGTGAIMAVPAHDERDYAFAKKYHLPIREVISGGDISKEAFTGEGIVVNSANDELSINGLKASEAKKKITEWLEKKGIGRYKVNYKLRDWLFSRQRYWGEPFPVLIGEDGEIRLVPEEELPVELPPMEDFKPRPSKEDEEPQPPLSRAPDEWKYVTIDGKRYRRELNTMPQWAGSCWYYLRYIDPHNDEKLVDPQKEKYWMPVDLYVGGTEHAVLHLLYARFWHKVLYDIGVVSTKEPFKKLVHQGMILGETEYTLFLDQNNQPVSAELVTRDGKHVKSGEPLNRRKLREDEVVKKGDVFVLKSDPKIVVEARAYKMSKSRGNVINPDEIIEKFGADSLRLYEMFMGPLKDTKSWSMKGVEGVHRFLNRVWRLVVNEETDELHELVGDMEPTAEQLRVLHETIKKVSDDLEEMAFNTAIAQMMIFVNEAYKWKTRPKSVLETFVLLLSPFAPHIAEELWQRLGHDRTLAYEPWPTYNADYLVKESIEIVIQINGKVRSRMALPPEEASNKKILEEKALQLEEVQKRIAGKTVRKVIAVPKKLVNIVVG
>NZ_CP018099.1|WP_006930183.1|2546619_2548221_-|sodium/solute-symporter
MATLNAIDLGIVIAYTLILFVIGFWSSRGQDEYASEYFLAGRKMGWLTIGASLFVTNISSEHLVGLASSGAQNGLVVGHFEWMAIIALLALGWFFAPLFLKAKIYTIPEFLEMRFNRPTRIYLTAVSIFAYVLTKIAITLFAGGLLLNAMLGWDIYTSALVMVVITGIYTIVGGLRAVMNTHVFQMGVLLAGSFILTTVGLNKIGGFGPLLAGLPDHYFDVIRSARDPHFPWTGIVFGAPILAVWYWCTDQYIVQRVLSAKDLEQARTATIFTGFLKLLPAGLMILPGMVAVVMFPGIKTDEVISLLFSGRFLPVGLRGIVLAGFLAALMSSLASVFNSTATLFTMDFYRLYDPQASERKLVLVGRLATTIIVITAILWIPLTRLFNQQVYLYLQSLQAYIAPPIAAVFLFGVFSNKINARGAFYALIAGGIFGALRLALEMALRARPLNLGALQWLVQINFLHFAILLFIFSSAVLFMVSWLSGEQKDQTTRTVFSFSFDANRALLSAGNLTQLVLSVFLVALIFGIYGLFF
>NZ_CP018099.1|WP_006930184.1|2548243_2550037_-|family-16-glycosylhydrolase
MKRLILVILAPLILWAQKPYRGAEYRTLETFTYGRFEVRMKSAPVSGMLSSFFTYHEINSIDEWNEIDIEILGRYNDQIQFNTITAGVTNHVYYQDVPFNPHQDFHLYAIEWTPNYVAWYVDSVEVFRQTGDHISTLFRAQKLMMNIWPPASESWAGTLNENQLPAYAYYDLVRVYRYTPGENQDFTLLWQDDFNAFNTSRWQKATHSWDGNNSQFIEENAVLKDGYLILCLTMPTSTGYQGGAIHDEDVTAPYIARAWFLDDRIVLNFSESIKRQAAETASNYIIPGLTVKNARLLNDERTVVLEVSERDPQVIYHVIATNISDRSAAANRIKVESIAIKNGVTLPLVINLGSEQGSATYQADYVFNVDRPYGHEGGSKVIHPLSANFRGAQNDTLYRSELRGLNFYRVRLPDGSYRLTFFFAESEFNAAGQRRFDVFAEDQKIIEGLDIYERVGSFAAYVVTIDNVEVKDQQLDLYFKPLAGKATCSALKIEKSASDLHEKTNEPRIPRQSALRVFPNPANPRLQLEFELPRSGETELSFYDVSGKRVLVLKRGTLNGGIYRSSLDVSGWGSGLYVCVLKQEQRMVARQKFIVLK
>NZ_CP018099.1|WP_071961276.1|2550415_2550817_+|hypothetical-protein
MLSVAEATVDCEVPSIECAPPRLHSGQAFDFAPFDCAQGAGIRLLSVAEATVDCEVPSIECAPPRLHSGQAFDFAPFGSAQGAGIRLLSVAENRLLSVVEATVDCKGPSIYYAQGAVKKEKDSTSPAGAGDVK
>NZ_CP018099.1|WP_006930185.1|2551283_2552495_+|YgeY-family-selenium-metabolism-linked-hydrolase
MTEALKQSVRNDRAELEKLLQRLIQIRSYSGEEKEIVEFIQQTMQAYGFDEVLVDSLGSIVGRIGDGPVKIMFDAHIDTVQVTDSENWNYPPFEGKIIDGKIYGRGTVDEKPAMAGYLIAGKAIKEQYKGKALPFTLYVVGSVMEEDCDGYPLLHLIEKDGIRPDYVLLGEPTDLKIYRGQRGRMEIEVSTFGKSAHGAHNQHGINAIYKMSKIVDQIEQLDKQLEPVEPLGKGSITVSEISSKGPSLCSVPDFCRIHIDRRLTLHEDKETALDQLREIAQKLNIQAEIRIPHYRGKSWKGTEFEQEAYFPTWLLKEDHPLLKAARSAAQKVFGREVSTGVWSFSTNGVATAGRLNIPTFGFAPGREELSHSDREELSLDDLAKAAEFYAVFPFVLAETINKK
>NZ_CP018099.1|WP_006930186.1|2552507_2553485_+|ornithine-carbamoyltransferase
METRLKGKHFITTQDWSVQELKTLFTLARQLKVEYAAGKFHKILEGKSLGMIFFDPSTRTRTSFEVAMTQLGGHSIFFAPNTMQISHGEGAKDTAKVLSGYLQGIAVRFCKYGEGNRYLNELREHSKVPIVNMQCDVYHPAQILADYLTITEHFGENTRGLKIGVSWTSAPNYVRPLSVPQSLILLMTRFGLDVTLAHPPEFELMPHIVDQARKNAEEAGVKFEISHKMEDAFEDADIVVPKSWGPLVHTQDEAEGLKLIEKYPDWIADAKRMALTKPHSLYMHPLPADRGKEVTPEVIDGPHSVVYQEAENRLHVQKALLSLIM
>NZ_CP018099.1|WP_150109373.1|2553671_2554772_+|pyridoxal-phosphate-dependent-enzyme
MQRFLTFRPGVPWQYPQLWPLEYDPATLQLKGLEPRLLHNLTLPSNQLLELEWEGRAFSVLDETRNPTFSFKDRASILVVLKAIQMGVKEIAAASTGNAGSSLAGICARSGLKAQIWAPQAIPQAKLLQIKAYGAIIHLVQGDYDLAFDQSIEISRQNQWYNRNTAYNPLTIEGKKSAAFDLFIQTNGRLPDVIFVPVGDGVIISGLFKGLRDLKALGWIERLPRLIAVQSSGSDALVRYMQEGKFVFKKANTLADSISAGAPRNLYLAARSVRESQGQAIAVSDEAIVKAQMILARKYGLLAEPAAAASFAGFLKLLAEAKLDRSERPLLLLTGNGLKDVEALKRIGEFGTARFSNGTKETGDVQ
>NZ_CP018099.1|WP_006930191.1|2554832_2556305_+|pyridoxal-phosphate-dependent-enzyme
MDNWNWEVQNEDYLKRTIKRCRENKIILPTFEQLKHPETIPAEIQEELTHIDMEELHPLNLFRIHWRNDPVSGKIGDYNYLEIPPEITGVRARIIGMVGKHFPTGAHKVGATYGCLAPYLVTGRFDPEYHKAVWPSTGNYCRGGVFNSALLSVHSVAILPEEMSQERFDWLREKGAEVYATPGCESNVKEIYDKCHELAAQSDEYLILNQFDQFGNAVWHYEITGYAIQEIFKKEKSGRQRLSGFVSATGSAGTIAAGDYLRTQFPLIKVLGAEALQCPTLLMNGFGGHRIEGIGDKHVPWIHNIKNLDLVAAIDDEDALRLLRLFNEPAGQEWLAAQGVSQEVIEKLPLLGISSCANLLASIKMAKYYEMNENDVIFTIFTDSVEMYHSRLEEMNRNWGPYSELQAAVDWHSVVLKQSIDYLKELDYYARKTIHNLKYFTWIEQQGKDVEELNAQWYDEDYWQKRFSIVPKWDAMIRRFNEQVMGGNGF

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Crispr_ID: NZ_CP018099_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018099_4

2541318-2541985

Orphan

Consensus_repeat	Method
GTCGGAAAGTACCCCGTTATTCAGAGGGGATTGAGAC	PILER-CR
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	CRISPRCasFinder
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	CRT

8 spacers

The CRISPR arrays of NZ_CP018099_4

>merge|NZ_CP018099|4|2541318-2541985|PILER-CR,CRISPRCasFinder,CRT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACTGAAATCAGCGGAAAAAGACGGAGATTATGTTGTGATTACTTAGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACTGTCCTCAATGTGGACATGAAATCAACGTCGGATACTGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACAGGGCCCGTTGGAAAAGAACAGCCGTCTCCTCAAAAGAGGAGTGGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACTAGAAAGCGATGGGATGAAGATCATCCAGGTATCCGATGACGAAGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACGATTAACCAGTCCATAATTAACCAATAACTCACCATATAAAGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACATGGCTACGTGATCATTGCCTATCGATTCCGTAACGGTACCAGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACACCAATTCATGGATGCCACTGAAATAAATCTTTGGGAAATCATGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGACAAGCACAAGGGGCTTTTAAATGGTATACCATTCTTGGTCAGGTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC

>NZ_CP018099|4|3|2541318-2541985|PILER-CR
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TGAAATCAGCGGAAAAAGACGGAGATTATGTTGTGATTACTTA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TGTCCTCAATGTGGACATGAAATCAACGTCGGATACT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	AGGGCCCGTTGGAAAAGAACAGCCGTCTCCTCAAAAGAGGAGTG
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TAGAAAGCGATGGGATGAAGATCATCCAGGTATCCGATGACGAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	GATTAACCAGTCCATAATTAACCAATAACTCACCATATAAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	ATGGCTACGTGATCATTGCCTATCGATTCCGTAACGGTACCA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	ACCAATTCATGGATGCCACTGAAATAAATCTTTGGGAAATCAT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	AAGCACAAGGGGCTTTTAAATGGTATACCATTCTTGGTCAG
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC

>NZ_CP018099|4|4|2541318-2541985|CRISPRCasFinder
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TGAAATCAGCGGAAAAAGACGGAGATTATGTTGTGATTACTTA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TGTCCTCAATGTGGACATGAAATCAACGTCGGATACT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	AGGGCCCGTTGGAAAAGAACAGCCGTCTCCTCAAAAGAGGAGTG
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TAGAAAGCGATGGGATGAAGATCATCCAGGTATCCGATGACGAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	GATTAACCAGTCCATAATTAACCAATAACTCACCATATAAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	ATGGCTACGTGATCATTGCCTATCGATTCCGTAACGGTACCA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	ACCAATTCATGGATGCCACTGAAATAAATCTTTGGGAAATCAT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	AAGCACAAGGGGCTTTTAAATGGTATACCATTCTTGGTCAG
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC

>NZ_CP018099|4|3|2541318-2541985|CRT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TGAAATCAGCGGAAAAAGACGGAGATTATGTTGTGATTACTTA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TGTCCTCAATGTGGACATGAAATCAACGTCGGATACT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	AGGGCCCGTTGGAAAAGAACAGCCGTCTCCTCAAAAGAGGAGTG
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	TAGAAAGCGATGGGATGAAGATCATCCAGGTATCCGATGACGAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	GATTAACCAGTCCATAATTAACCAATAACTCACCATATAAA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	ATGGCTACGTGATCATTGCCTATCGATTCCGTAACGGTACCA
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	ACCAATTCATGGATGCCACTGAAATAAATCTTTGGGAAATCAT
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC	AAGCACAAGGGGCTTTTAAATGGTATACCATTCTTGGTCAG
GTCTCAATCCCCTCTGAATAACGGGGTACTTTCCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018099.1\|WP_006930184.1\|2548243_2550037_-\|family-16-glycosylhydrolase	unknown	unknown	gnl\|CDD\|185684
NZ_CP018099.1\|WP_006930180.1\|2540573_2540927_-\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|274132
NZ_CP018099.1\|WP_071961276.1\|2550415_2550817_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930183.1\|2546619_2548221_-\|sodium/solute-symporter	unknown	unknown	gnl\|CDD\|271363
NZ_CP018099.1\|WP_006930186.1\|2552507_2553485_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|223156
NZ_CP018099.1\|WP_006930173.1\|2526633_2528973_+\|DUF1939-domain-containing-protein	unknown	unknown	gnl\|CDD\|236518
NZ_CP018099.1\|WP_150109373.1\|2553671_2554772_+\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|107206
NZ_CP018099.1\|WP_006930175.1\|2533552_2534017_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367427
NZ_CP018099.1\|WP_006930179.1\|2537743_2538265_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930182.1\|2543825_2546459_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|178177
NZ_CP018099.1\|WP_006930193.1\|2557646_2559104_+\|dihydroorotase	unknown	unknown	gnl\|CDD\|238640
NZ_CP018099.1\|WP_006930176.1\|2534013_2535084_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930185.1\|2551283_2552495_+\|YgeY-family-selenium-metabolism-linked-hydrolase	unknown	unknown	gnl\|CDD\|183836
NZ_CP018099.1\|WP_006930191.1\|2554832_2556305_+\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223110
NZ_CP018099.1\|WP_044281310.1\|2536090_2536375_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930174.1\|2531018_2533529_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|224389
NZ_CP018099.1\|WP_006930181.1\|2542314_2543808_-\|DUF92-domain-containing-protein	unknown	unknown	gnl\|CDD\|376674
NZ_CP018099.1\|WP_006926671.1\|2536481_2537714_-\|ISL3-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_CP018099.1\|WP_044281307.1\|2529203_2530190_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP018099.1\|WP_006930177.1\|2535279_2535999_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239313

Protein	Function_ID	Function_description	E-value
NZ_CP018099.1\|WP_006930184.1\|2548243_2550037_-\|family-16-glycosylhydrolase	gnl\|CDD\|185684	cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16. Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure.	6.76537e-54
NZ_CP018099.1\|WP_006930180.1\|2540573_2540927_-\|four-helix-bundle-protein	gnl\|CDD\|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	1.08235e-25
NZ_CP018099.1\|WP_006930193.1\|2557646_2559104_+\|dihydroorotase	gnl\|CDD\|238640	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.	1.65332e-129
NZ_CP018099.1\|WP_006930183.1\|2546619_2548221_-\|sodium/solute-symporter	gnl\|CDD\|271363	cd10329, SLC5sbd_SGLT1-like, Na(+)/glucose cotransporter SGLT1 and related proteins; solute binding domain. This subfamily includes the solute-binding domain of SGLT proteins that cotransport Na+ with various solutes. Its members include: the human glucose (SGLT1, -2, -4, -5 ), chiro-inositol (SGLT5), and myo-inositol (SMIT) cotransporters. It also includes human SGLT3 which has been characterized as a glucose sensor and not a transporter. It belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_CP018099.1\|WP_006930186.1\|2552507_2553485_+\|ornithine-carbamoyltransferase	gnl\|CDD\|223156	COG0078, ArgF, Ornithine carbamoyltransferase [Amino acid transport and metabolism].	3.89277e-127
NZ_CP018099.1\|WP_006930173.1\|2526633_2528973_+\|DUF1939-domain-containing-protein	gnl\|CDD\|236518	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed.	2.70852e-62
NZ_CP018099.1\|WP_150109373.1\|2553671_2554772_+\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|107206	cd01563, Thr-synth_1, Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.	2.97622e-97
NZ_CP018099.1\|WP_006930182.1\|2543825_2546459_-\|leucine--tRNA-ligase	gnl\|CDD\|178177	PLN02563, PLN02563, aminoacyl-tRNA ligase.	0
NZ_CP018099.1\|WP_006930185.1\|2551283_2552495_+\|YgeY-family-selenium-metabolism-linked-hydrolase	gnl\|CDD\|183836	PRK13004, PRK13004, YgeY family selenium metabolism-linked hydrolase.	2.42571e-175
NZ_CP018099.1\|WP_006930175.1\|2533552_2534017_-\|hypothetical-protein	gnl\|CDD\|367427	pfam03266, NTPase_1, NTPase. This domain is found across all species from bacteria to human, and the function was determined first in a hyperthermophilic bacterium to be an NTPase. The structure of one member-sequence represents a variation of the RecA fold, and implies that the function might be that of a DNA/RNA modifying enzyme. The sequence carries both a Walker A and Walker B motif which together are characteristic of ATPases or GTPases. The protein exhibits an increased expression profile in human liver cholangiocarcinoma when compared to normal tissue.	8.7919e-10
NZ_CP018099.1\|WP_006930191.1\|2554832_2556305_+\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	1.21974e-39
NZ_CP018099.1\|WP_006930174.1\|2531018_2533529_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	4.90719e-86
NZ_CP018099.1\|WP_006930181.1\|2542314_2543808_-\|DUF92-domain-containing-protein	gnl\|CDD\|376674	pfam01940, DUF92, Integral membrane protein DUF92. Members of this family have several predicted transmembrane helices. The function of these prokaryotic proteins is unknown.	1.29307e-67
NZ_CP018099.1\|WP_006926671.1\|2536481_2537714_-\|ISL3-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	2.49128e-82
NZ_CP018099.1\|WP_044281307.1\|2529203_2530190_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	0.00101826
NZ_CP018099.1\|WP_006930177.1\|2535279_2535999_-\|peroxiredoxin	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	3.57512e-87

>NZ_CP018099.1|WP_006930180.1|2540573_2540927_-|four-helix-bundle-protein
MKADDLEKRLIDFSVKVINICKIMSEDYISRHLSVQLLRSATSVAANYGEARGAESRKDFVHKLRICLKELNETTIWLKIIEGSNFIEEKDIRILLSESKELQKIIGSSLSTLKQSK
>NZ_CP018099.1|WP_006930179.1|2537743_2538265_-|hypothetical-protein
MVQTKHIFTIKDSTPFLTQRVVSEYDDQMNERTRLIYKNADQLLLVVKKEFNIRQSVTRSSTFDGQGRLKSIVAYEYDRRGNLIGKKFFNKNREIISRQLWKFDAHEKKLTLYEKYGLEERLLERKVFEYQNGNLSSVKIFTPGPDAFRLKRYFYDKEGREIEEKILALLGFL
>NZ_CP018099.1|WP_006926671.1|2536481_2537714_-|ISL3-family-transposase
MKDKELFKQILGLSHPWEVSKVDLDIANEEVEIEIIYKSKKGFCPECEVEYDIYDHREKRRWRHLDTCQMKTYIVCKVPRIKCKEHGVKTIKVPWAEKSSRTTLLFERFAIELLLASKNQSKTAQFLRISFDMLHHIMSKAVERGLSRRTEEDIKYIGIDEKSMKRGHTYVSVLSDSERRRVIDVSEGRTTSSASSLINKGLTEKQKEGLKAVSMDMWKAFIKAVQKELPNASIVHDKFHIMKYLNDGVDKTRREEARKLQKSNDKTLVKSKYLFLKNPENMTDKQLSRFRKIQELNLITSQAWAAKENFKEFFRSETINDAKFFFAEWYQDIKGRSLNKMIKVAKMLIAHSDGLLNYIRYQIDNSVAEWLNGKIQEIKTVGRGFRKFENFRIAILFFLGKLDLFPQESQ
>NZ_CP018099.1|WP_044281310.1|2536090_2536375_-|hypothetical-protein
MQRTEKFEYYADGTIKSEEVDDLFGNQYFRKKFDVIGDVLEAYHHKKGFFENLEIYQYDNDGKKIKQEKYSIKISKKTLKQQIFYDYKAGKINF
>NZ_CP018099.1|WP_006930177.1|2535279_2535999_-|peroxiredoxin
MAEKSGGCARPTGARVGEPQQTPELNDQQPMVEEETFMTAKVGNKAPDFTAPAYYKGEFTEIKLSDYLGKWVLLCFYPGDFTFVUATEIAAVAANYDTLQKLGVEVISVSVDSQFVHKMWNDHEISKMIDKDIPFPMVADGAGNVGKVYGVYDENAGVELRGRFIIDPDGVIQAMEVLTPPVGRNIEETIRQVQAFQHVRATKGAEACPSGWQPGKKTLKPGPALVGNVWKEWLPKNDL
>NZ_CP018099.1|WP_006930176.1|2534013_2535084_-|hypothetical-protein
MFSEEKRQLFLNRLTALWALNEAGLGGLMHALRIPFTGIFIGGTAVVLITLIAYFARPDFKRILKSMLIVLIIKALVSPHSPINAYVAVIFQGLAGFALFTVFSSNLKAAAFLLAMITLIEGAVQKILVMTIIYGASLWEAIDLFISYLLKRFASVNLDFSASLAIISAYFILHIMGGFLIGLLCIKFLKLMEQLPDRFAHLPQIDLSARTMNIEKGKKKGKYKKFIHLSVLLFFIIGTLTLFSTKDGLLQGMLVFFRVFALILLWYLFLGPFLIKRLHRFLNTKSKLYANEIEHIHDILPSLKQIVFILWQDSAKYIYLKRWKYFLVNLILVSLTLEMDQPQAKAVSTSTTGESS
>NZ_CP018099.1|WP_006930175.1|2533552_2534017_-|hypothetical-protein
MIYLLTGVVRSGKTTRLLEWSKNRRDVAGILTPDRRQRRVLLDVRTGSEHPFQVQSKAESVISIGRFTFSARTFEIGRAILKREREADCRWLIIDEIGPLELRGKGFEPEVEATIRFFKNHAPQRNLILVIRDTLKDAALKHYGLTDPVIFNFP
>NZ_CP018099.1|WP_006930174.1|2531018_2533529_+|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein
MISRLIFLLTLTAATLFSQSANIDRQIEELLSKMTLEEKASYIGGTKGFYLRAIPRLGLPEVKMSDGPLGIRGSGKSTAFPATIALSATWNRALAYKVGQAIGLEARAKQIGILLAPAVNIYRAPMCGRNFEYFGEDPFLTAEMAVQYIKGVQSNKVAATVKHFAANNQEYDRHWVGSNVDERTLREIYFPAFKAAVQKGGALAVMAAYNPLNGIHCSEKAWLLNEVLKKEWGVEGLVMSDWGAVHSERAIEAGLDLEMPEARFMTAEKIIALIKKGELDEKILDDKVRRILRVCLTMDLFNANRSKPTIDWDEHHDLAVQVAREGMVLLKNDDDLLPLKPEKIRSLVVLGPTAYPTPTSGGGSAFIKPYRTISFYEAIKNTAGSQTQVDFINTERYLSMDRLVEQGRFFVDSDLSEPGLKAIFFNNMELRYPPIYRRVDQKIAFDFGTLSPAFGVRSSGYSIRWRAYIKPEKTGKYVFATESDDGVRVYLDGTLIIDNWTDHAVQKDVKEVRLVAGKVYDLRLEYYNNKGQGLIRFGYGLIDETPLAQKMARVKEYDAAIVCVGFNSELEGEGHDRPFSLPQKQVDLIQQVARRNSNTIVLLTAGGGVDFLPWIKKVKAVLHAFYPGQAGGEPAADILFGKVNPSGKLPFTIEKRLQDGAAFNYYYPAAVDTPVYSADFSGNPQNIDYGEGIFLGYRHFDKYNLEPLFPFGFGLSYTRFDFDDLELSGKVIRPDGRLTVRCKITNKGKMAGAEVVQLYLKKEVDVVTVEKALKGFQKVELQPGESNIIEFEILPEHLQVFDHLKKQWEVKAGKYQVLVGSSSRDIRLKGKFLVKP
>NZ_CP018099.1|WP_044281307.1|2529203_2530190_-|T9SS-type-A-sorting-domain-containing-protein
MSVLKSSLIILLFSCTIFAGTPVIDGIFDGEAVWGQPVHVADGIPGFAEANAKKIYVTDDENYIYFGAEVSAAKWMSWAFIVNTKSGGGSYDSWSRAIDYAHADLPDYAPRGHFGGSGDQDINYAELNYWTGTSWDGYVGLEQSEFADTISVNHVVDGWIEIRILKSEMGTPDVGDVQFYITGDNNNHGNFDSCPDDDTAYDWDMSANHNILDTYQMNVPLNSVPAALSENSVQDIDFRLLGNFPNPFNPCTTIRFTSKANASILLSIYNTRGQKIFSEERQFSGAGQHDWQLSLNQLGRDLTSGIYFYSLTDRASGQRQNGKMILIK
>NZ_CP018099.1|WP_006930173.1|2526633_2528973_+|DUF1939-domain-containing-protein
MRRVLLGLALVLLFSFANLFANPWNGRIVLQGFWWDYWNNNYPNNWATYLADLAPRLSEMGIDYVWIPPTVKNHSTSSNGYAPFDHYDLGDKYQKGSTSTRFGNKDEFLRAVAVLHANGLRVIQDVVWNHLANAGSNTGAGGSDPAAWGNTWKNFRYVCYATPVTDESEADYFNRQGRFFKNWQNFHPNPDHNQNDDDWTGEFWGPDLCYYQGAYGQSSNCTYNPEQSPDYVRNGMRTWNIWLKKQTGIDGYRIDAAKHFPYWATKDFLWNLQHDAGWASGGDTMFAVGEYVGSKSEMDTWVDNVNNSDGFSDVVGTMDFSLRQALRDMVYSFGSYDMGTIPSAQQDRRTRTVPFVNSHDTFRPILDSNGNYSGWDTYNELGGGHIDPYEPRVEVAYAIAFAVDGSPSVFFEDLFDIGANGNRWDHHPNDPNELPARDYLVNLIWCHQKLNFKDGEYKVRWQAQDLLIIERSARAIIGANDSWDQWQSATITTDFAPGTVLKDYSGANSGTITVDNNQQVTIWVPPCDGSNIRRGYCVYGPDGISGPVTHQVRTTTQEWEMADDLGDSHEWSLGQGGRLPSYSTALRTIGKIWSEAGEQVTIEVYPEDAAQSYTLRIYNDQNQQMASFTHTGAGTFYFTPTYQEWLTLKIRNTDSNTPGQKVWVKATYLGPQVIDQGASLVGEQGVIYDFRLFNNYPNPFNPSTTLAFEIPKAGQVRLVIYDLNGRLVKTLFDSRVAQGRHQLQWDGTNFNGDALPSGVYFARLIFDGKTRTQKLVLLK
>NZ_CP018099.1|WP_006930181.1|2542314_2543808_-|DUF92-domain-containing-protein
MDWNSFLTAPQPADLILAVGAFLLILLILLISVWLKKILDLSHEVVRKFSHMGIGVLAALAPLYFSTPLLLLLLSLLFLTVNWVAVKKGLLKSIHSGRYSFGTVYFPLVYMILILIFWNIDRRFILLGIALFAIADALAALVGQRWGKSTSFTLVADQKSLLGSIAMFISSFALIYLILKFSFEVDRLLVLQVIALAALVTVVEALSSKGSDNFFVPFSGAVLAFLLVNFNEAQLNRFLSGEILALITAILSYRFRFLSLSGSAMVFLLATVIFGFGGWAWSVPILTFFILSSLLSKLGKNTKNQFKDTFEKSGVRDYAQVLANGGIGGALVILNALFPDRMWYQLYLLSLMVATSDTWSTEIGVLSKSNPRLITTFRKVKPGISGAVSLLGTAGGFLGSALILLSGLFFTELNGRVILWLLLLGLLGNLLDSLIGATVQGQYQCSVCGKYTEKKMHCDRETSLISGSKIIGNDMVNVASNLMAIILMVIIYYFHVL
>NZ_CP018099.1|WP_006930182.1|2543825_2546459_-|leucine--tRNA-ligase
MAYPFGKIEKKWQKFWEEQKTFKTEDKFDQPKYYVLDMFPYPSGAGLHVGHPEGYTATDIMARYKRMKGFNVLHPMGWDAFGLPAEQYAIETGTHPRITTERNIERFRKQLKAIGFSYDWDREVNTTDPKYYKWTQWIFIQLYKKGLAYLDEVPVNWCPALGTVLADEEVINGRSERGNHPVYRRPLKQWVLKITEYADRLLEDLELVDWPESTKEMQKNWIGRSEGAEVEFPVVGLDEKIEVFTTRPDTLFGATYMVLAPEHPLVEKITTEEYRAQVQAYQKQAAQKSDLERTELQKDKTGVFTGGYAINPVNNEKIPIWVADYVLISYGTGAIMAVPAHDERDYAFAKKYHLPIREVISGGDISKEAFTGEGIVVNSANDELSINGLKASEAKKKITEWLEKKGIGRYKVNYKLRDWLFSRQRYWGEPFPVLIGEDGEIRLVPEEELPVELPPMEDFKPRPSKEDEEPQPPLSRAPDEWKYVTIDGKRYRRELNTMPQWAGSCWYYLRYIDPHNDEKLVDPQKEKYWMPVDLYVGGTEHAVLHLLYARFWHKVLYDIGVVSTKEPFKKLVHQGMILGETEYTLFLDQNNQPVSAELVTRDGKHVKSGEPLNRRKLREDEVVKKGDVFVLKSDPKIVVEARAYKMSKSRGNVINPDEIIEKFGADSLRLYEMFMGPLKDTKSWSMKGVEGVHRFLNRVWRLVVNEETDELHELVGDMEPTAEQLRVLHETIKKVSDDLEEMAFNTAIAQMMIFVNEAYKWKTRPKSVLETFVLLLSPFAPHIAEELWQRLGHDRTLAYEPWPTYNADYLVKESIEIVIQINGKVRSRMALPPEEASNKKILEEKALQLEEVQKRIAGKTVRKVIAVPKKLVNIVVG
>NZ_CP018099.1|WP_006930183.1|2546619_2548221_-|sodium/solute-symporter
MATLNAIDLGIVIAYTLILFVIGFWSSRGQDEYASEYFLAGRKMGWLTIGASLFVTNISSEHLVGLASSGAQNGLVVGHFEWMAIIALLALGWFFAPLFLKAKIYTIPEFLEMRFNRPTRIYLTAVSIFAYVLTKIAITLFAGGLLLNAMLGWDIYTSALVMVVITGIYTIVGGLRAVMNTHVFQMGVLLAGSFILTTVGLNKIGGFGPLLAGLPDHYFDVIRSARDPHFPWTGIVFGAPILAVWYWCTDQYIVQRVLSAKDLEQARTATIFTGFLKLLPAGLMILPGMVAVVMFPGIKTDEVISLLFSGRFLPVGLRGIVLAGFLAALMSSLASVFNSTATLFTMDFYRLYDPQASERKLVLVGRLATTIIVITAILWIPLTRLFNQQVYLYLQSLQAYIAPPIAAVFLFGVFSNKINARGAFYALIAGGIFGALRLALEMALRARPLNLGALQWLVQINFLHFAILLFIFSSAVLFMVSWLSGEQKDQTTRTVFSFSFDANRALLSAGNLTQLVLSVFLVALIFGIYGLFF
>NZ_CP018099.1|WP_006930184.1|2548243_2550037_-|family-16-glycosylhydrolase
MKRLILVILAPLILWAQKPYRGAEYRTLETFTYGRFEVRMKSAPVSGMLSSFFTYHEINSIDEWNEIDIEILGRYNDQIQFNTITAGVTNHVYYQDVPFNPHQDFHLYAIEWTPNYVAWYVDSVEVFRQTGDHISTLFRAQKLMMNIWPPASESWAGTLNENQLPAYAYYDLVRVYRYTPGENQDFTLLWQDDFNAFNTSRWQKATHSWDGNNSQFIEENAVLKDGYLILCLTMPTSTGYQGGAIHDEDVTAPYIARAWFLDDRIVLNFSESIKRQAAETASNYIIPGLTVKNARLLNDERTVVLEVSERDPQVIYHVIATNISDRSAAANRIKVESIAIKNGVTLPLVINLGSEQGSATYQADYVFNVDRPYGHEGGSKVIHPLSANFRGAQNDTLYRSELRGLNFYRVRLPDGSYRLTFFFAESEFNAAGQRRFDVFAEDQKIIEGLDIYERVGSFAAYVVTIDNVEVKDQQLDLYFKPLAGKATCSALKIEKSASDLHEKTNEPRIPRQSALRVFPNPANPRLQLEFELPRSGETELSFYDVSGKRVLVLKRGTLNGGIYRSSLDVSGWGSGLYVCVLKQEQRMVARQKFIVLK
>NZ_CP018099.1|WP_071961276.1|2550415_2550817_+|hypothetical-protein
MLSVAEATVDCEVPSIECAPPRLHSGQAFDFAPFDCAQGAGIRLLSVAEATVDCEVPSIECAPPRLHSGQAFDFAPFGSAQGAGIRLLSVAENRLLSVVEATVDCKGPSIYYAQGAVKKEKDSTSPAGAGDVK
>NZ_CP018099.1|WP_006930185.1|2551283_2552495_+|YgeY-family-selenium-metabolism-linked-hydrolase
MTEALKQSVRNDRAELEKLLQRLIQIRSYSGEEKEIVEFIQQTMQAYGFDEVLVDSLGSIVGRIGDGPVKIMFDAHIDTVQVTDSENWNYPPFEGKIIDGKIYGRGTVDEKPAMAGYLIAGKAIKEQYKGKALPFTLYVVGSVMEEDCDGYPLLHLIEKDGIRPDYVLLGEPTDLKIYRGQRGRMEIEVSTFGKSAHGAHNQHGINAIYKMSKIVDQIEQLDKQLEPVEPLGKGSITVSEISSKGPSLCSVPDFCRIHIDRRLTLHEDKETALDQLREIAQKLNIQAEIRIPHYRGKSWKGTEFEQEAYFPTWLLKEDHPLLKAARSAAQKVFGREVSTGVWSFSTNGVATAGRLNIPTFGFAPGREELSHSDREELSLDDLAKAAEFYAVFPFVLAETINKK
>NZ_CP018099.1|WP_006930186.1|2552507_2553485_+|ornithine-carbamoyltransferase
METRLKGKHFITTQDWSVQELKTLFTLARQLKVEYAAGKFHKILEGKSLGMIFFDPSTRTRTSFEVAMTQLGGHSIFFAPNTMQISHGEGAKDTAKVLSGYLQGIAVRFCKYGEGNRYLNELREHSKVPIVNMQCDVYHPAQILADYLTITEHFGENTRGLKIGVSWTSAPNYVRPLSVPQSLILLMTRFGLDVTLAHPPEFELMPHIVDQARKNAEEAGVKFEISHKMEDAFEDADIVVPKSWGPLVHTQDEAEGLKLIEKYPDWIADAKRMALTKPHSLYMHPLPADRGKEVTPEVIDGPHSVVYQEAENRLHVQKALLSLIM
>NZ_CP018099.1|WP_150109373.1|2553671_2554772_+|pyridoxal-phosphate-dependent-enzyme
MQRFLTFRPGVPWQYPQLWPLEYDPATLQLKGLEPRLLHNLTLPSNQLLELEWEGRAFSVLDETRNPTFSFKDRASILVVLKAIQMGVKEIAAASTGNAGSSLAGICARSGLKAQIWAPQAIPQAKLLQIKAYGAIIHLVQGDYDLAFDQSIEISRQNQWYNRNTAYNPLTIEGKKSAAFDLFIQTNGRLPDVIFVPVGDGVIISGLFKGLRDLKALGWIERLPRLIAVQSSGSDALVRYMQEGKFVFKKANTLADSISAGAPRNLYLAARSVRESQGQAIAVSDEAIVKAQMILARKYGLLAEPAAAASFAGFLKLLAEAKLDRSERPLLLLTGNGLKDVEALKRIGEFGTARFSNGTKETGDVQ
>NZ_CP018099.1|WP_006930191.1|2554832_2556305_+|pyridoxal-phosphate-dependent-enzyme
MDNWNWEVQNEDYLKRTIKRCRENKIILPTFEQLKHPETIPAEIQEELTHIDMEELHPLNLFRIHWRNDPVSGKIGDYNYLEIPPEITGVRARIIGMVGKHFPTGAHKVGATYGCLAPYLVTGRFDPEYHKAVWPSTGNYCRGGVFNSALLSVHSVAILPEEMSQERFDWLREKGAEVYATPGCESNVKEIYDKCHELAAQSDEYLILNQFDQFGNAVWHYEITGYAIQEIFKKEKSGRQRLSGFVSATGSAGTIAAGDYLRTQFPLIKVLGAEALQCPTLLMNGFGGHRIEGIGDKHVPWIHNIKNLDLVAAIDDEDALRLLRLFNEPAGQEWLAAQGVSQEVIEKLPLLGISSCANLLASIKMAKYYEMNENDVIFTIFTDSVEMYHSRLEEMNRNWGPYSELQAAVDWHSVVLKQSIDYLKELDYYARKTIHNLKYFTWIEQQGKDVEELNAQWYDEDYWQKRFSIVPKWDAMIRRFNEQVMGGNGF
>NZ_CP018099.1|WP_006930193.1|2557646_2559104_+|dihydroorotase
MRNVNIIRNVFIPIGNNELQLVDIHFDETIHSIEKRLPESVAWSEIAAPEQRASFIQKVSARLKAVQAPEIDGQFLVLMPGAIDPHVHFNTPGFEFREDFDHASLAALWGGVTTIIDMPCTSLPPVTSLPNMRRKLQALQNRAYCDYAFWGGISGTDFSDGQRLKQNMKELVEAGVMGFKAYLISGMEKFTDLNAGQMKQAAEWIKDLNVPLAVHAEDKELVVTRRGQFQAQGQNDWQAYCSARDIEAEARAVSLMASIVRQTGAAVHIVHLSSKRGLEIVQNARNNDLPMTAETCPHYLYFTQQDFKRPQIRNYLKTAPPVKFAEDRDALWQGLADGSLLFVTTDHAGCDPKTEKVSENFWQVYGGIPGVEHRVPFLFSEGFLKGRLTLEQCVNLLSTNAAHFFKFKNKGSLARGKDADFALIDLWHGWTVKADAMHSKGKYTPFEGVEFKAQVIKTFLRGVLAVNRDENYQTTTPIGKFVPRN

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Crispr_ID: NZ_CP018099_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018099_5

2756469-2756564

Orphan

Consensus_repeat	Method
GACTTTTGGGACAGCCCCGGGGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018099_5

>merge|NZ_CP018099|5|2756469-2756564|CRISPRCasFinder
GACTTTTGGGACAGCCCCGGGGAATTAAAGGGGGTGAGGGAAAGAAAATATTTATAAAAATACATTCTCTTTGACTTTTGGGACAGCTCCGGGGAA

>NZ_CP018099|5|5|2756469-2756564|CRISPRCasFinder
GACTTTTGGGACAGCCCCGGGGAA	TTAAAGGGGGTGAGGGAAAGAAAATATTTATAAAAATACATTCTCTTT
GACTTTTGGGACAGCTCCGGGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018099.1\|WP_006930453.1\|2749337_2749655_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930456.1\|2751944_2752373_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|224679
NZ_CP018099.1\|WP_150109313.1\|2746052_2747771_-\|nickel-dependent-hydrogenase-large-subunit	unknown	unknown	gnl\|CDD\|366057
NZ_CP018099.1\|WP_006926562.1\|2752806_2754393_+\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP018099.1\|WP_006930463.1\|2764010_2765366_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP018099.1\|WP_169313662.1\|2765355_2767077_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236901
NZ_CP018099.1\|WP_006930457.1\|2752393_2752549_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006930460.1\|2759732_2760635_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|180267
NZ_CP018099.1\|WP_006930459.1\|2758638_2759718_-\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099
NZ_CP018099.1\|WP_006930454.1\|2749670_2751053_-\|tetrathionate-reductase-family-octaheme-c-type-cytochrome	unknown	unknown	gnl\|CDD\|275119
NZ_CP018099.1\|WP_044281357.1\|2769867_2771904_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|236901
NZ_CP018099.1\|WP_006930462.1\|2761743_2763990_-\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
NZ_CP018099.1\|WP_006930465.1\|2768560_2769814_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340888
NZ_CP018099.1\|WP_006926562.1\|2756761_2758348_-\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP018099.1\|WP_006930450.1\|2745356_2746040_-\|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit	unknown	unknown	gnl\|CDD\|273985
NZ_CP018099.1\|WP_006930452.1\|2747770_2748883_-\|hydrogenase-small-subunit	unknown	unknown	gnl\|CDD\|224654
NZ_CP018099.1\|WP_006930455.1\|2751481_2751811_-\|Hpt-domain-containing-protein	unknown	unknown	gnl\|CDD\|197502
NZ_CP018099.1\|WP_006930461.1\|2760650_2761658_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP018099.1\|WP_071961280.1\|2754692_2756453_+\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705
NZ_CP018099.1\|WP_006930467.1\|2771975_2772521_-\|cytochrome-c-family-protein	unknown	unknown	gnl\|CDD\|372604

Protein	Function_ID	Function_description	E-value
NZ_CP018099.1\|WP_006930456.1\|2751944_2752373_-\|OsmC-family-protein	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	8.84252e-41
NZ_CP018099.1\|WP_150109313.1\|2746052_2747771_-\|nickel-dependent-hydrogenase-large-subunit	gnl\|CDD\|366057	pfam00374, NiFeSe_Hases, Nickel-dependent hydrogenase.	0
NZ_CP018099.1\|WP_006926562.1\|2752806_2754393_+\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.83181e-21
NZ_CP018099.1\|WP_006930463.1\|2764010_2765366_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP018099.1\|WP_169313662.1\|2765355_2767077_-\|HAMP-domain-containing-protein	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	2.27045e-69
NZ_CP018099.1\|WP_006930459.1\|2758638_2759718_-\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0
NZ_CP018099.1\|WP_006930460.1\|2759732_2760635_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	7.24444e-116
NZ_CP018099.1\|WP_006930454.1\|2749670_2751053_-\|tetrathionate-reductase-family-octaheme-c-type-cytochrome	gnl\|CDD\|275119	TIGR04315, cytochrome_c_family_protein, octaheme c-type cytochrome, tetrathionate reductase family. Members of this protein family bind heme covalently and contain eight (at least) CXXCH heme-binding motifs. A characterized member is the respiratory enzyme octaheme tetrathionate reductase from Shewanella.	0
NZ_CP018099.1\|WP_044281357.1\|2769867_2771904_-\|PAS-domain-containing-protein	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	3.32319e-70
NZ_CP018099.1\|WP_006930462.1\|2761743_2763990_-\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_CP018099.1\|WP_006930465.1\|2768560_2769814_+\|MFS-transporter	gnl\|CDD\|340888	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.1224e-91
NZ_CP018099.1\|WP_006926562.1\|2756761_2758348_-\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.83181e-21
NZ_CP018099.1\|WP_006930455.1\|2751481_2751811_-\|Hpt-domain-containing-protein	gnl\|CDD\|197502	smart00073, HPT, Histidine Phosphotransfer domain. Contains an active histidine residue that mediates phosphotransfer reactions. Domain detected only in eubacteria. This alignment is an extension to that shown in the Cell structure paper.	4.75051e-11
NZ_CP018099.1\|WP_006930452.1\|2747770_2748883_-\|hydrogenase-small-subunit	gnl\|CDD\|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	7.84046e-176
NZ_CP018099.1\|WP_006930450.1\|2745356_2746040_-\|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit	gnl\|CDD\|273985	TIGR02125, CytB-hydogenase, Ni/Fe-hydrogenase, b-type cytochrome subunit. This model describes a family of cytochrome b proteins which appear to be specific for nickel-iron hydrogenase complexes. Every genome which contains a member of this family posesses a Ni/Fe hydrogenase according to Genome Properties (GenProp0177), and most are gene clustered with other hydrogenase components. Some Ni/Fe hydrogenase-containing species lack a member of this family but contain other CytB homologs (pfam01292) which may substitute for it.	7.175e-47
NZ_CP018099.1\|WP_006930461.1\|2760650_2761658_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.34078e-24
NZ_CP018099.1\|WP_071961280.1\|2754692_2756453_+\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.57184e-32
NZ_CP018099.1\|WP_006930467.1\|2771975_2772521_-\|cytochrome-c-family-protein	gnl\|CDD\|372604	pfam13435, Cytochrome_C554, Cytochrome c554 and c-prime. This family is a tetra-haem cytochrome involved in the oxidation of ammonia. It is found in both phototrophic and denitrifying bacteria.	1.33808e-19

>NZ_CP018099.1|WP_071961280.1|2754692_2756453_+|IS1182-family-transposase
MKPKRCRKIPFKTTDQNQLTILPPSLDELIEPNHMVRFINAIIDKMDIDFLIKEYKGGGRAAYHPRMLLKVVIYAYTQKIFTSRQIAKALRENIHFMWLSGNSRPDFRTINRFRSSRLKGKIEEVFTYVVEQLLELGYIELNDLFIDGSKFQANANKYKAVWKKNVDRYQRVLQEKLKELLKKIDNENDLENRLYGNKDLGELGEDVTLSSHQIEQIVDILNERLKKEPDNKELKRAKNKIEKDYLPRQRKYEKQRKLLNGRNSYSQTDPDATFMSKKRDHHNNTDLLPSYNVQVGSENQFIVNYTINQNANDSVLLKPFMESYKRCYGRQPNRVIGDAGYGSEENYAYLESEGVEAYIKYSSYYKEQKKSYKENPFLIDNMRYDPELDRYECPAGRYLEYVGEQENVTSTGFKVKHRIYRSESCEGCALKEKCYKGQTARVVRVNVMLNDYKKQVRSRLNTEEGRKLISKRGSEIETIFGQIKHNLGIRGFLLRGLEKVKTEFGIIAVAYNLKKMFNQMKEYGLVNEMYKYSANIFFNLNRASQCQNLGPKNTILKSLERFFIEIKEKIVVKYSSCLFNAKICFV
>NZ_CP018099.1|WP_006926562.1|2752806_2754393_+|IS1182-family-transposase
MSFITYNRSQMNLFGYSVEDFARDDPKSRFVVELVSRLDLSALYSRYSSQGGDSYAPDMMLALWFYAYSNGITSTRKLEELCKYDTRYIYITGNQHPDHSTLSRFRKAHLDLLDQYFVEILLIAQAEGISSFNQIAIDGTKIKAHSSKRHGYTEDQLDKRIEKLRAEIKQYMQRCNFVEQGATDELDLETLRAEKERLERLEKEILERKAQLKERKKQLKSEHRSRHQINVKEPDARMMPSVDGPGYNAQLGVDMSSHLIVAHEVVSQPNDQGQFIPIQEQVEKNLGSDDKRSYTADSGYHNSTDLKELEEKQIDAVIADPQLSNRSIKETPTSKEELQKEERKLKRSDFVYHEQGDYYECPTGKKLFPVERNSERIVYRSNDCQDCPLINLCISSKKKVKQIHRSVNESYCERMAKKLQTSAAQERLKKRSVTVEPVFGNLKHNLGYRGFSLSGLNNVRSEFTLMCIGHNINVLFKNMLGKRLAAFITASQEKDDLLILFSKNILAFLILYFAQRLRMRKNYQYRRI
>NZ_CP018099.1|WP_006930457.1|2752393_2752549_-|hypothetical-protein
MIHVLAALGGGGIGYLIGKYMSKAGFGCPLICDPRISTIYFALIGLFLSFK
>NZ_CP018099.1|WP_006930456.1|2751944_2752373_-|OsmC-family-protein
MATQVKGKVVHIKGVTFNGITDSNHWVPMDGPPKFGGENGAIRPKELLLLSLAGCTGSDVASILTKMRQKFQRFEVHVEAEMADEHPKVYTKIHLTYKVWGDVNEQNLVKAINLSQDVYCAVTAMLQKAVEITHSYEINPQE
>NZ_CP018099.1|WP_006930455.1|2751481_2751811_-|Hpt-domain-containing-protein
MGKKIIDWETAIERLGGDKEFLVELLNELVEQIEQTLPELKTAIEQKNFAEVRSMAHGLKGAAANLGADKISDKFYELEIMGKEEKLDGAPGVYNEIVQMYEELKQELS
>NZ_CP018099.1|WP_006930454.1|2749670_2751053_-|tetrathionate-reductase-family-octaheme-c-type-cytochrome
MRYILLIFFLLIVGHLFAEDHSSYIKGPFKNPQEVTKQCLTCHEESAQQIMKTSHWTWSTPPVKVPGHEGLHRIGKKDIFNNYCIHVQSNWPRCTSCHTGYGWKDDSFDFDKEENVDCLICHADPKIYKKNPAGAGFPKKDVDLLKAARSVRLPDRENCGSCHFYGGGGENVKHGDLEQILANPTRDQDVHMGSGMVCQDCHVHENHDFKGRGSSVSVLDENHLYCADCHGLDAHENERLNLHVRSIACQTCHIPTFAKGMATKIWWDWSKAGMDIEPKEEYGRETFNKKKGEFHWAKNVRPEYAWYNGTMDRYLKGDKLDPANILYLNRPRGSVYDNKAKIYPFKVMRGKQIYDAEYNYLIIPNLWGGYWKHFNWDKAAKDGMAAAGLPYSGHYAFVETKMYWRINHEVVPKEKALQCVDCHGKNSILDWEKLGYEGDPMFMGDRKKEELIREYDLERK
>NZ_CP018099.1|WP_006930453.1|2749337_2749655_-|hypothetical-protein
MYNKDGILTVLLGVLWLPFFLFGSDTNISLHPAVKLLDAHGVPVIQSGQPISTEKTCSACHDYEFITIHSYHAQQGKNEFFTDETRPKNFADFVLLPGMFAMSSL
>NZ_CP018099.1|WP_006930452.1|2747770_2748883_-|hydrogenase-small-subunit
MSKTPSFREHLERSGLSRREFLRFCSYAAALIGLDATGIPRVVHAFESQPRPPVIWLHFQECTCCSESFIRSSHPMVGDLILDQISLDYTETLQAAAGEAAEKCLKDTMKNYHGKYFLLVEGSVPTKDDGIYCTIAGRSALEILHETAEGAAAIIAWGSCASNGCVQSSSPNPTGATPIHEILDKPVIKVPGCPPIADVMTGVVTHVLVFGSIPELDGQGRPKSFYSRRVHDTCYRRPYYDAGLFVERWDDEKARKGYCLYKMGCRGPVTYNACAVTRWNAGTSYPIQSGHGCIGCSENNFWDNGPFYRHLASFPGFGIETTADTIGTVVGAAALAGVTAHAITTNIRKRKLIKEHLEESVNVKKEGEDN
>NZ_CP018099.1|WP_150109313.1|2746052_2747771_-|nickel-dependent-hydrogenase-large-subunit
MMARLVVDPITRIEGHLRIEAVVENGVITDAFSSGTMVRGLEIILKGRDPRDAWAFTERVCGVCTTVHALASVRTVEDALNIKVPKNAELIRNLMFCAQMVQDHVIHFYHLHALDWVDVVSALKADPKETSQIAKSISSWPKSSPKYFKEVQDRLKAFVESGQLGIFANGYWGHPAYKLPPAVNLLAVTHYLEMLEWQKELIKIHTIFGGKNPHPNYLVGGVPCSINLNEVNAINMERLNHVKKLIDDAIEIVEKVYLPDLIAIAGFYKDWTKYGGGLKNYLAYGDLPTRSYGEPAHFKFPRGVVLDRNLNEVHEVDPRDQQEIQEYVTHSWYKYSVGDEQSLHPWDGETEFNFTGPKPPFKELNVEGKYSWLKTPRWKGKPMEVGPLARMLVAYASGNKEVQELVNDTLKQLNAPATALFSTLGRTAARGLETKLVVHWMKEFYNDLINNIKNGDMRTFNEEKWNPKTWPEEAQGVGMTEAPRGALAHWIRIKDRKIANYQLIVPSTWNASPRDANNQRSAYEEALIGTPVKDPHKPVEVLRTIHSFDPCLACAVHLYDPQGNHVRRIQIM
>NZ_CP018099.1|WP_006930450.1|2745356_2746040_-|Ni/Fe-hydrogenase,-b-type-cytochrome-subunit
MQAVKKNVYRRVYVWEFPVRLFHWVNAICIVVLAVTGYIIGKPFALEYSNEAYQQYWFGTVRFLHFVSAFIFFFNFLVRIYWGFVGNQYADWKNFIPLKKKQWQEIWEVLKVDILQKDVTERISIGHNSLAGLIYFISFLIFLFQAFTGFALYSSMSSSFLPQLFSWVVPFMGGDFAVRQWHHMFMWFFIVFTIIHVYLVFYHDYVEGRGTTSSMVGGWKFEKEENL
>NZ_CP018099.1|WP_006926562.1|2756761_2758348_-|IS1182-family-transposase
MSFITYNRSQMNLFGYSVEDFARDDPKSRFVVELVSRLDLSALYSRYSSQGGDSYAPDMMLALWFYAYSNGITSTRKLEELCKYDTRYIYITGNQHPDHSTLSRFRKAHLDLLDQYFVEILLIAQAEGISSFNQIAIDGTKIKAHSSKRHGYTEDQLDKRIEKLRAEIKQYMQRCNFVEQGATDELDLETLRAEKERLERLEKEILERKAQLKERKKQLKSEHRSRHQINVKEPDARMMPSVDGPGYNAQLGVDMSSHLIVAHEVVSQPNDQGQFIPIQEQVEKNLGSDDKRSYTADSGYHNSTDLKELEEKQIDAVIADPQLSNRSIKETPTSKEELQKEERKLKRSDFVYHEQGDYYECPTGKKLFPVERNSERIVYRSNDCQDCPLINLCISSKKKVKQIHRSVNESYCERMAKKLQTSAAQERLKKRSVTVEPVFGNLKHNLGYRGFSLSGLNNVRSEFTLMCIGHNINVLFKNMLGKRLAAFITASQEKDDLLILFSKNILAFLILYFAQRLRMRKNYQYRRI
>NZ_CP018099.1|WP_006930459.1|2758638_2759718_-|butyrate-kinase
MSEIKDPLILAINPGSTSTKISLFKGEKEILTENIAHKIEELARFNRASDQDLYRMELIIRYLREQKVNLSEIAAVVGRGGLVRPIEGGTYIVTEQMVADLKKGIMGDHPSNCGGLIAYAISKALGCQAYIVDPVVVDELQELARISGMPLIPRKSIFHALNQKAVARETAKKLGKKYRESSIIVAHMGGGVTVGAHYRGKVIDVNNGLDGDGPFSPERSGGVPVGDLVKVAFSGTYTYQDMKKLIKGHGGMVAYLGTHDLRVVEDRIDKGDSEAKLIFEAMAYQIAKEIGALATVLFGQVDAIALTGGVAKSKRFVDLIKKRVSFIAPIYIFPGEEEMRALALGALRVLNKEEEAKVY
>NZ_CP018099.1|WP_006930460.1|2759732_2760635_-|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MLRSFKQLLNQVSKMERRKIAVAMAQDSEILLALNAAYSAGLGDAILVGDREQIIKRAEEEHINVKNFEIVDVKEEKKCVREAVEIVRSGEAQVIMKGLCSTANFLKGILNKEYGLRAAEVLSHLAIFESPNYPKLLMMSDAAMNIAPDLKTKIAITNNAIRAAHALGYKRPKVALLSAVEKVNAENMPSSADAAIMAKMAERGQLAEAIVDGPLALDNALSPKANQIKGLQSAVGGKADICIVPNIEAGNIFYKLMTILGNALVAGVILGAAAPVVLTSRADSENAKFLSIATALAVVS
>NZ_CP018099.1|WP_006930461.1|2760650_2761658_-|GGDEF-domain-containing-protein
MQQPILQAIEKSMAEINSAKNYERILHNILNQLVRILDLNAAAIVELNPDTELLEIRNSYNLSWNFCKNYRRSIDSSLLRELIWNNQDINIPERKHALKVVEQLRLEHEFVSGFATSLNAFQQPLGFLFVDSNVLNFFSDETQSIVRIFAGMISTAIYLERISQKLKKMERVDEESGALRFESYLPFLKENFHRSTRMNEPYSLLLLDVEKYSHIITQYGVKVAQSLLKEMVQKIKIQLRKYDEICRFGADEFLISLPATDVKNALQAAKKLIKIVQETEFTEKKLRVGVFIGIATFPENANSLNGLLIAVKNALMLAKRMSGTMNVSTISTKFD
>NZ_CP018099.1|WP_006930462.1|2761743_2763990_-|NADP-dependent-malic-enzyme
MIRKEDALAYHSEGRKGKIEVINTKPCLTQRDLSLAYTPGVAEPCREIEKNPDLVYEYTAKGNLVAVVSNGTAVLGLGDIGPMAGKPVMEGKGVLFKRFADIDVFDIEIDSKDPEEIVRTVKLLEPTFGGINLEDIKAPECFYIEEKLMEIMDIPVFHDDQHGTAIISAAALLNALYLQGKKIEEVKVVFSGAGAAGIACATLYCELGVKKENLYLVDSKGLVYKGRKEGMNPYKERFANGDSPATLAEVMKDADVFAGVSVAGLVTKEMVKSMADKPIIMAMANPDPEIRYEDAIAVRSDLIMATGRSDYPNQVNNVLGFPFIFRGALDVHARKINMEMKKAAVHALAELARQDVPDSVIRAYGGKPFHFGPEYIIPKPFDPRVLTWEALAVAKAAVESGVARKKITDWDAYRDSLESRLGRTHEVSRILINKAKDIKKRIVLPEGEEIKVLRAAQILIDEEIVSPILLGNKEQILKMAKEHDLDISRAEIVEYASCQKIDAYVDELYRLRQRKGLTRNACRRLLTTDPNYFGVMMVRMGDADGMVSGVNHYYPEVIRPALQILEVQKDKKFIAGLYAMVLKKETIFFADTTVNIESTAEILANTAIMVADKVKKTFDIEPRIAMLSFSNFGSVRHPYAEKVAKATQMVKQMRPDLIIDGEMQVDLAFDTELRDRDYSFSDLKGRANVLIFPSLEAGNIAYKLMMRLGGAEAIGPILVGLEKSVHVLQRNCDVDTIVRMCAIAAVDA
>NZ_CP018099.1|WP_006930463.1|2764010_2765366_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MKANILVVDDERSIRDSLEMVLKEEGYNVKTATDGKQALKLLEENNFDIMITDLKMPELDGIQLTKHCLQTYPQTSVIIITAYGSLETAIEALRVGAYDYILKPFDFDDVLIKVQNLIKHKELILENQALRREIHSRYDFSNIVGQSPQMKEVFKLIEKVAKTKSNVLITGKSGTGKELVARAIHYNSDRANKPFVAINCGAIVGTLMESEFFGHKKGSFTGAIRDKDGFFKIANGGTLFLDEVGDIPMHLQVKLLRAIEEGVIMPVGGTTPIQIDVRIIAATNRDLMKDIENGRFRDDLYYRLNVVEIKLPSLNERKEDIPLLVDHFIKKYNNELKRRVLGTDNETMRILMNYPWKGGIRELENVIERALILCEGEYITKSDLPPNMVREEYLSAVPDRLKDAVAAFEKEHILNILRRTGNNKEEAAKLLDISLSSLYRKMDELGIKNVL
>NZ_CP018099.1|WP_169313662.1|2765355_2767077_-|HAMP-domain-containing-protein
MLLQKNSGLNLRFFIYFLLFAYVPLLIFSVVGYFLNKQILRQIYLNDQQQYLITWEKNFNKIVEVEKGVYTILLNNLDDHEKIFTLKHSGSAIVSKPLALSENGEIIVPRELDEQSVKKVYNLIHSESSLYFNQDDATFWLKVDLESERILIIKYPLHNLLTTDFALQQNTRLYLISENDGVVISKQEIRLFDKSPSLKTTQLQAFIDELVNNEAWITIIDDFEPGWKVAFQRSTETIFRPLRKFLFQIIVANLALGILLLFFAIFTAQSISRPIRMLAEAAKRISHGHLNEKFPIKGKDEIRELAAEFETMRQKLLESYQNLEKKIEERTRALKEAQFQISHQEKMASIGLLAAGIAHEIGNPLTSISSMTQIIKRKVNDENVKQYLNTILENIERISRIVRELVDFARPSSLEATWVNVNDVVRNAYGIVKYDRRAKTVDFQLNLQENLPNLFLAPDQLLQVILNMLLNAMDALKEGKGKIEITTRLEDDHVIISIADTGVGIPQEHLNKIFEPFFTTKDVGHGTGLGLSVSYGIIKNFNGSIQVKSEVGKGSIFTIKLPVKSNMEQMNES
>NZ_CP018099.1|WP_006930465.1|2768560_2769814_+|MFS-transporter
MKGYKKELTIIFLVIFIDLLGFGIIIPIIPYYLEEFVTQPDQIGKVIASMITVYSLMQFIFSPIWGRLSDRIGRRPILLMSLAGSAITHVIFALGGNLTVLFVARILTGIFAATVPTAMAYISDITPPEDRAKGMGIVGAAFGLGFILGPALGGIVSGFAGHRVPLLMAAGFSMTAFTFAYLKLKETVDTENPVVRDYQRFNLKNLYRALHHPNLGILFLIFFIVSTSFANFETIFALYLERTFGYQAHHAGYFFAMIGVISATTQGVFIGRLAKRFGEKRLITTATLILGVAFILFPFVHVLAFFLVIVAAIAFSFGMHNPSVTALISKNAARTEQGGILGINQSFSSLGRVIGPLWAGYFFDKFGPEIPFVSAGLFILLAMALSFRLYGKSLKESHQSIEQQRAEVLPANHQKLD
>NZ_CP018099.1|WP_044281357.1|2769867_2771904_-|PAS-domain-containing-protein
MMFKKILITLKTYRYLFMLYFLVAALLIFNAFFEMRQSKKELMELMENQSEATLHSLILASENLIKNNVQTQMIIEHQMARTLEILYTISKLTDFNPYLLDSIASRAGIAGILFLDANFTPQTVVGEFKRLTLEQWNQLLDKAFTLQTISGDTVFWQQRLSETDSVQYRIGCEFLPGGEVLLLIGEPKMMGAFSNHINFGRLIRNIAERSPDIIYLALQDSASIIAAAGHVQFLGNPLNETILKESEPANPVSFRILDFDSVSVFEASHPFHYQNRQIGLFRLGLSTKALQSINDRIFQRLLVLSAILIGFAFLIVTFGFIRQRYDILQKQYAVIETYSSNIIENVSDAIIVFNNRQGIQIFNSAAERLFKQDKNAVLGKPITHLLHSETLDLIVRKNEPVQEIELTIGDVSKIVLISQSHFWDGDNTENYIVVIRDITRQKHLEDRMKRQEQLTAVGQLAAGVAHEIRNPLNSISTIVQQLKKDFKPTRDEDVYNELIDIVYTEVKRINQKINEFLRFSRPEPIRPSKFKLSDWLNSIIKQYQPTFEDRQIEFVLQLNWDGEVFWDADQMRGVMSNLIQNAIDAMTERKRLEVCVTKENDKIIIKVTDSGKGIPPEQLDKIFNLYFTTKADGTGIGLSIVQRIVFEHDGMIRVSSERDKGTTFTITLPRTIALDSSQ
>NZ_CP018099.1|WP_006930467.1|2771975_2772521_-|cytochrome-c-family-protein
MRRSFQFLLTLILAVGVLGSFSYAKDFKYVGAAKCKTCHNTKKSGKQYTIWKNGPHAKAMESLKSEASLKYAKEHGIADPSTDPKCTKCHATMAAVDKALIDPKGKLTMEEGVSCESCHGPGSVYKKLSIMKDREKALANGLVLPEEKVCVTCHNEQNPFHKPFNYKEFSAKIAHPTPKKK

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Crispr_ID: NZ_CP018099_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018099_6

3373049-3375860

TypeIII

Consensus_repeat	Method
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	PILER-CR
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CRISPRCasFinder
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CRT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	PILER-CR

36 spacers

cas2,cas1,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6

The CRISPR arrays of NZ_CP018099_6

>merge|NZ_CP018099|6|3373049-3375860|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAAAAGGATCGGAACCGATTAAAACCAAAATCGGTTTCGATTTCGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTTGTGCGTAGTTAAACAAAAAAGGAGGAGAAAAAATGAAAAAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACATGGCTTTACGTCGGCTATTGGCCACGTTGACACTGCGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACCAATTTGCTACTGACGAGGAAATTAAAAGAGGCCTTGCTATGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACGTGTCTGGTTTTTCTTAAGTGATGAAACATATCGTGGGGTTAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACCCGGCTTGCCGAAGCGGTCGATTTTAACCCTATCAAAGCAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACCCTATTATGTTTATATTGTGTTATCCCCAATCCCACTTCTGAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTTTACTATTATCCGGCCCAGCGCCTCAGCCCGGACCGTGAGTGGTTCAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACCTAAAACATGCTCACGAGATTGTTAGAGTTACAGAACATAGAGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACGTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCTGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACACGTCAACCAAAAGGAGGTTTATTATGGATAAATTTATAGGTATTGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACGGGTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCTGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACGAATTTTAACCTTGAGGAGAAAAGTCATGGAAAAAGTAATCGTGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACGTACGGACGGATCAATGATTATTTATTCTTAAAATTGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAGTACTTAGTGCTCAAGACCTATCCAAAGCATCAGCTGATTAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTGAATAAAGGAGCGACGAAATGAATACTATATATGATGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTGGATTCCTAAGAAGGCGATTGAGTCTATCCAAGAGACTGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAATTATTACCATTGTAAAAGGAGGCAAAAACGGATTACATGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTGTTAGATCAAATCAAAAGAAGAGTAGAAAAAGGAAAATGGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTCCGGAAACCAGTCAGTCGCCATATAAAGCCCCAGCAGCCGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAAAAGGAAAATGGTGGGACACCGTAATATTCTACAGCGGTGAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTATAGTGAAGAAAATGAATAAAGGAGCGACGAAATGAATACTAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTTTGAATCCGTTCTTAGACTTATTAATAAAATGATAATAGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACCAGTTAGAATTATTGCAAAAAGGAGATCTTAATGGTAGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTGGCTTTACGTCCGTCGTAGAGCCTTCCCTTCTTTATCCTCGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTCTACAGCGGTGATCCTAAGGTGTTTAATCCAGAAACTCAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTTAAAAGAAAAGGAGTAAAAGATGTTAGATCAAATCAAAAGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACACAGAGAAAAATGCCGAAGCATTACGCAAGCTGGTTAAAAGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACACGGTTATTAGTGGAAACTCAATTACTGCATGCAGAGAGGGAAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAAGGCAGCAATTTATGCTCGCAATGAGTTCGGAATGCGAAGCGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAAAAATAATTTACAAAGAATTTGAAAAGGGGGGAAAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTAAGTTCTGCCCAGAGTGCGGAGAACCACTGGCTTTTCACGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTATGTACTACTTAGTTTGTCTTTTTGTAGGCTTTCTTTTCGGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTGCCGCAGTATAGCATTTAAAACCGCTTGGCATTCTGAAAAATGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAAAGGTAACAAATTAGTTACTTACGCAGGGCTTTACCAGAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACATTTTGGGAAGAAATAGACGATAACGAGCTCCCCAATTCCGGCGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC

>NZ_CP018099|6|4|3373049-3374628|PILER-CR
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAGGATCGGAACCGATTAAAACCAAAATCGGTTTCGATTTC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTGTGCGTAGTTAAACAAAAAAGGAGGAGAAAAAATGAAAAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ATGGCTTTACGTCGGCTATTGGCCACGTTGACACTGC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CAATTTGCTACTGACGAGGAAATTAAAAGAGGCCTTGCTATG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTGTCTGGTTTTTCTTAAGTGATGAAACATATCGTGGGGTTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CCGGCTTGCCGAAGCGGTCGATTTTAACCCTATCAAAGCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CCTATTATGTTTATATTGTGTTATCCCCAATCCCACTTCTGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTTTAC	TATTATCCGGCCCAGCGCCTCAGCCCGGACCGTGAGTGGTTCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CTAAAACATGCTCACGAGATTGTTAGAGTTACAGAACATAGAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACGTCAACCAAAAGGAGGTTTATTATGGATAAATTTATAGGTATT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GGGTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GAATTTTAACCTTGAGGAGAAAAGTCATGGAAAAAGTAATCGT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTACGGACGGATCAATGATTATTTATTCTTAAAATTG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AGTACTTAGTGCTCAAGACCTATCCAAAGCATCAGCTGATTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGAATAAAGGAGCGACGAAATGAATACTATATATGATG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGGATTCCTAAGAAGGCGATTGAGTCTATCCAAGAGACTG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AATTATTACCATTGTAAAAGGAGGCAAAAACGGATTACAT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGTTAGATCAAATCAAAAGAAGAGTAGAAAAAGGAAAATGG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TCCGGAAACCAGTCAGTCGCCATATAAAGCCCCAGCAGCC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAAAAGGAAAATGGTGGGACACCGTAATATTCTACAGCGGTGAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTATAGTGAAGAAAATGAATAAAGGAGCGACGAAATGAATACTAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTTGAATCCGTTCTTAGACTTATTAATAAAATGATAATAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CAGTTAGAATTATTGCAAAAAGGAGATCTTAATGGTAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGGCTTTACGTCCGTCGTAGAGCCTTCCCTTCTTTATCCTC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TCTACAGCGGTGATCCTAAGGTGTTTAATCCAGAAACTCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTAAAAGAAAAGGAGTAAAAGATGTTAGATCAAATCAAAAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACAGAGAAAAATGCCGAAGCATTACGCAAGCTGGTTAAAAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACGGTTATTAGTGGAAACTCAATTACTGCATGCAGAGAGGGAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAGGCAGCAATTTATGCTCGCAATGAGTTCGGAATGCGAAGCG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAATAATTTACAAAGAATTTGAAAAGGGGGGAAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TAAGTTCTGCCCAGAGTGCGGAGAACCACTGGCTTTTCACG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TATGTACTACTTAGTTTGTCTTTTTGTAGGCTTTCTTTTCG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGCCGCAGTATAGCATTTAAAACCGCTTGGCATTCTGAAAAAT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAGGTAACAAATTAGTTACTTACGCAGGGCTTTACCAGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ATTTTGGGAAGAAATAGACGATAACGAGCTCCCCAATTCCGGC


>NZ_CP018099|6|6|3373049-3375860|CRISPRCasFinder
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAGGATCGGAACCGATTAAAACCAAAATCGGTTTCGATTTC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTGTGCGTAGTTAAACAAAAAAGGAGGAGAAAAAATGAAAAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ATGGCTTTACGTCGGCTATTGGCCACGTTGACACTGC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CAATTTGCTACTGACGAGGAAATTAAAAGAGGCCTTGCTATG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTGTCTGGTTTTTCTTAAGTGATGAAACATATCGTGGGGTTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CCGGCTTGCCGAAGCGGTCGATTTTAACCCTATCAAAGCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CCTATTATGTTTATATTGTGTTATCCCCAATCCCACTTCTGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTTTAC	TATTATCCGGCCCAGCGCCTCAGCCCGGACCGTGAGTGGTTCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CTAAAACATGCTCACGAGATTGTTAGAGTTACAGAACATAGAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACGTCAACCAAAAGGAGGTTTATTATGGATAAATTTATAGGTATT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GGGTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GAATTTTAACCTTGAGGAGAAAAGTCATGGAAAAAGTAATCGT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTACGGACGGATCAATGATTATTTATTCTTAAAATTG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AGTACTTAGTGCTCAAGACCTATCCAAAGCATCAGCTGATTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGAATAAAGGAGCGACGAAATGAATACTATATATGATG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGGATTCCTAAGAAGGCGATTGAGTCTATCCAAGAGACTG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AATTATTACCATTGTAAAAGGAGGCAAAAACGGATTACAT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGTTAGATCAAATCAAAAGAAGAGTAGAAAAAGGAAAATGG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TCCGGAAACCAGTCAGTCGCCATATAAAGCCCCAGCAGCC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAGGAAAATGGTGGGACACCGTAATATTCTACAGCGGTGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TATAGTGAAGAAAATGAATAAAGGAGCGACGAAATGAATACTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTTGAATCCGTTCTTAGACTTATTAATAAAATGATAATAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CAGTTAGAATTATTGCAAAAAGGAGATCTTAATGGTAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGGCTTTACGTCCGTCGTAGAGCCTTCCCTTCTTTATCCTC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TCTACAGCGGTGATCCTAAGGTGTTTAATCCAGAAACTCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTAAAAGAAAAGGAGTAAAAGATGTTAGATCAAATCAAAAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACAGAGAAAAATGCCGAAGCATTACGCAAGCTGGTTAAAAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACGGTTATTAGTGGAAACTCAATTACTGCATGCAGAGAGGGAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAGGCAGCAATTTATGCTCGCAATGAGTTCGGAATGCGAAGCG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAATAATTTACAAAGAATTTGAAAAGGGGGGAAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TAAGTTCTGCCCAGAGTGCGGAGAACCACTGGCTTTTCACG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TATGTACTACTTAGTTTGTCTTTTTGTAGGCTTTCTTTTCG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGCCGCAGTATAGCATTTAAAACCGCTTGGCATTCTGAAAAAT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAGGTAACAAATTAGTTACTTACGCAGGGCTTTACCAGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ATTTTGGGAAGAAATAGACGATAACGAGCTCCCCAATTCCGGC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC

>NZ_CP018099|6|4|3373049-3375860|CRT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAGGATCGGAACCGATTAAAACCAAAATCGGTTTCGATTTC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTGTGCGTAGTTAAACAAAAAAGGAGGAGAAAAAATGAAAAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ATGGCTTTACGTCGGCTATTGGCCACGTTGACACTGC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CAATTTGCTACTGACGAGGAAATTAAAAGAGGCCTTGCTATG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTGTCTGGTTTTTCTTAAGTGATGAAACATATCGTGGGGTTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CCGGCTTGCCGAAGCGGTCGATTTTAACCCTATCAAAGCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CCTATTATGTTTATATTGTGTTATCCCCAATCCCACTTCTGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTTTAC	TATTATCCGGCCCAGCGCCTCAGCCCGGACCGTGAGTGGTTCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CTAAAACATGCTCACGAGATTGTTAGAGTTACAGAACATAGAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACGTCAACCAAAAGGAGGTTTATTATGGATAAATTTATAGGTATT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GGGTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GAATTTTAACCTTGAGGAGAAAAGTCATGGAAAAAGTAATCGT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTACGGACGGATCAATGATTATTTATTCTTAAAATTG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AGTACTTAGTGCTCAAGACCTATCCAAAGCATCAGCTGATTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGAATAAAGGAGCGACGAAATGAATACTATATATGATG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGGATTCCTAAGAAGGCGATTGAGTCTATCCAAGAGACTG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AATTATTACCATTGTAAAAGGAGGCAAAAACGGATTACAT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGTTAGATCAAATCAAAAGAAGAGTAGAAAAAGGAAAATGG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TCCGGAAACCAGTCAGTCGCCATATAAAGCCCCAGCAGCC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAGGAAAATGGTGGGACACCGTAATATTCTACAGCGGTGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TATAGTGAAGAAAATGAATAAAGGAGCGACGAAATGAATACTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTTGAATCCGTTCTTAGACTTATTAATAAAATGATAATAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CAGTTAGAATTATTGCAAAAAGGAGATCTTAATGGTAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGGCTTTACGTCCGTCGTAGAGCCTTCCCTTCTTTATCCTC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TCTACAGCGGTGATCCTAAGGTGTTTAATCCAGAAACTCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTAAAAGAAAAGGAGTAAAAGATGTTAGATCAAATCAAAAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACAGAGAAAAATGCCGAAGCATTACGCAAGCTGGTTAAAAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACGGTTATTAGTGGAAACTCAATTACTGCATGCAGAGAGGGAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAGGCAGCAATTTATGCTCGCAATGAGTTCGGAATGCGAAGCG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAATAATTTACAAAGAATTTGAAAAGGGGGGAAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TAAGTTCTGCCCAGAGTGCGGAGAACCACTGGCTTTTCACG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TATGTACTACTTAGTTTGTCTTTTTGTAGGCTTTCTTTTCG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGCCGCAGTATAGCATTTAAAACCGCTTGGCATTCTGAAAAAT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAGGTAACAAATTAGTTACTTACGCAGGGCTTTACCAGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ATTTTGGGAAGAAATAGACGATAACGAGCTCCCCAATTCCGGC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC

>NZ_CP018099|6|5|3374750-3375860|PILER-CR
	AAAAGGATCGGAACCGATTAAAACCAAAATCGGTTTCGATTTC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTGTGCGTAGTTAAACAAAAAAGGAGGAGAAAAAATGAAAAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ATGGCTTTACGTCGGCTATTGGCCACGTTGACACTGC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CAATTTGCTACTGACGAGGAAATTAAAAGAGGCCTTGCTATG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTGTCTGGTTTTTCTTAAGTGATGAAACATATCGTGGGGTTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CCGGCTTGCCGAAGCGGTCGATTTTAACCCTATCAAAGCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CCTATTATGTTTATATTGTGTTATCCCCAATCCCACTTCTGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTTTAC	TATTATCCGGCCCAGCGCCTCAGCCCGGACCGTGAGTGGTTCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CTAAAACATGCTCACGAGATTGTTAGAGTTACAGAACATAGAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACGTCAACCAAAAGGAGGTTTATTATGGATAAATTTATAGGTATT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GGGTCTTCTATTTCGGGGAACTATTCCCCGATTGGGAAGACCT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GAATTTTAACCTTGAGGAGAAAAGTCATGGAAAAAGTAATCGT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	GTACGGACGGATCAATGATTATTTATTCTTAAAATTG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AGTACTTAGTGCTCAAGACCTATCCAAAGCATCAGCTGATTA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGAATAAAGGAGCGACGAAATGAATACTATATATGATG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGGATTCCTAAGAAGGCGATTGAGTCTATCCAAGAGACTG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AATTATTACCATTGTAAAAGGAGGCAAAAACGGATTACAT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGTTAGATCAAATCAAAAGAAGAGTAGAAAAAGGAAAATGG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TCCGGAAACCAGTCAGTCGCCATATAAAGCCCCAGCAGCC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACAAAAGGAAAATGGTGGGACACCGTAATATTCTACAGCGGTGAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTACTATAGTGAAGAAAATGAATAAAGGAGCGACGAAATGAATACTAGTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTTGAATCCGTTCTTAGACTTATTAATAAAATGATAATAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	CAGTTAGAATTATTGCAAAAAGGAGATCTTAATGGTAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGGCTTTACGTCCGTCGTAGAGCCTTCCCTTCTTTATCCTC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TCTACAGCGGTGATCCTAAGGTGTTTAATCCAGAAACTCA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TTAAAAGAAAAGGAGTAAAAGATGTTAGATCAAATCAAAAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACAGAGAAAAATGCCGAAGCATTACGCAAGCTGGTTAAAAG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ACGGTTATTAGTGGAAACTCAATTACTGCATGCAGAGAGGGAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAGGCAGCAATTTATGCTCGCAATGAGTTCGGAATGCGAAGCG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAAATAATTTACAAAGAATTTGAAAAGGGGGGAAA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TAAGTTCTGCCCAGAGTGCGGAGAACCACTGGCTTTTCACG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TATGTACTACTTAGTTTGTCTTTTTGTAGGCTTTCTTTTCG
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	TGCCGCAGTATAGCATTTAAAACCGCTTGGCATTCTGAAAAAT
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	AAAGGTAACAAATTAGTTACTTACGCAGGGCTTTACCAGA
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC	ATTTTGGGAAGAAATAGACGATAACGAGCTCCCCAATTCCGGC
GTCTTAATCCCTTCAAGCAGGTCATTCCTTTTCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018099.1\|WP_006926549.1\|3358083_3360864_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|224544
NZ_CP018099.1\|WP_006926558.1\|3367895_3368333_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006926556.1\|3363171_3365895_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|379155
NZ_CP018099.1\|WP_006926568.1\|3379963_3380689_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_CP018099.1\|WP_006926572.1\|3383641_3384568_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_CP018099.1\|WP_006926563.1\|3376125_3376407_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP018099.1\|WP_006926574.1\|3385124_3385769_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP018099.1\|WP_006926571.1\|3381135_3383649_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_CP018099.1\|WP_006926567.1\|3378940_3379960_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	COG1567_csm4gr5_CAS-III-A	gnl\|CDD\|273866
NZ_CP018099.1\|WP_006926551.1\|3362351_3362945_-\|DUF4382-domain-containing-protein	unknown	unknown	gnl\|CDD\|379555
NZ_CP018099.1\|WP_006926550.1\|3360885_3362337_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006926569.1\|3380732_3381119_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NZ_CP018099.1\|WP_006926548.1\|3356295_3358068_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006926559.1\|3368349_3370101_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP018099.1\|WP_006926561.1\|3370207_3370762_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	unknown
NZ_CP018099.1\|WP_006926565.1\|3376675_3377758_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP018099.1\|WP_006926566.1\|3377789_3378944_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|273863
NZ_CP018099.1\|WP_006926564.1\|3376403_3376679_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP018099.1\|WP_044281468.1\|3366035_3367046_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP018099.1\|WP_006926562.1\|3371129_3372716_-\|IS1182-family-transposase	unknown	unknown	gnl\|CDD\|372705

Protein	Function_ID	Function_description	E-value
NZ_CP018099.1\|WP_006926549.1\|3358083_3360864_-\|TonB-dependent-receptor	gnl\|CDD\|224544	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism].	1.13734e-28
NZ_CP018099.1\|WP_006926556.1\|3363171_3365895_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|379155	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.	6.53925e-21
NZ_CP018099.1\|WP_006926568.1\|3379963_3380689_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.51477e-89
NZ_CP018099.1\|WP_006926572.1\|3383641_3384568_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	9.03989e-07
NZ_CP018099.1\|WP_006926566.1\|3377789_3378944_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|273863	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm5, for CRISPR/cas Subtype Mtube, protein 5.	1.08623e-18
NZ_CP018099.1\|WP_006926571.1\|3381135_3383649_-\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	1.82901e-154
NZ_CP018099.1\|WP_006926567.1\|3378940_3379960_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.22359e-39
NZ_CP018099.1\|WP_006926551.1\|3362351_3362945_-\|DUF4382-domain-containing-protein	gnl\|CDD\|379555	pfam14321, DUF4382, Domain of unknown function (DUF4382). This family is found in bacteria and archaea, and is typically between 142 and 161 amino acids in length.	2.17692e-11
NZ_CP018099.1\|WP_006926574.1\|3385124_3385769_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	4.36626e-82
NZ_CP018099.1\|WP_006926569.1\|3380732_3381119_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	7.55774e-24
NZ_CP018099.1\|WP_006926559.1\|3368349_3370101_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	1.18216e-06
NZ_CP018099.1\|WP_006926564.1\|3376403_3376679_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	2.18547e-22
NZ_CP018099.1\|WP_006926565.1\|3376675_3377758_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	4.24947e-95
NZ_CP018099.1\|WP_006926563.1\|3376125_3376407_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	9.26078e-21
NZ_CP018099.1\|WP_044281468.1\|3366035_3367046_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	7.43397e-121
NZ_CP018099.1\|WP_006926562.1\|3371129_3372716_-\|IS1182-family-transposase	gnl\|CDD\|372705	pfam13751, DDE_Tnp_1_6, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.83181e-21

>NZ_CP018099.1|WP_006926562.1|3371129_3372716_-|IS1182-family-transposase
MSFITYNRSQMNLFGYSVEDFARDDPKSRFVVELVSRLDLSALYSRYSSQGGDSYAPDMMLALWFYAYSNGITSTRKLEELCKYDTRYIYITGNQHPDHSTLSRFRKAHLDLLDQYFVEILLIAQAEGISSFNQIAIDGTKIKAHSSKRHGYTEDQLDKRIEKLRAEIKQYMQRCNFVEQGATDELDLETLRAEKERLERLEKEILERKAQLKERKKQLKSEHRSRHQINVKEPDARMMPSVDGPGYNAQLGVDMSSHLIVAHEVVSQPNDQGQFIPIQEQVEKNLGSDDKRSYTADSGYHNSTDLKELEEKQIDAVIADPQLSNRSIKETPTSKEELQKEERKLKRSDFVYHEQGDYYECPTGKKLFPVERNSERIVYRSNDCQDCPLINLCISSKKKVKQIHRSVNESYCERMAKKLQTSAAQERLKKRSVTVEPVFGNLKHNLGYRGFSLSGLNNVRSEFTLMCIGHNINVLFKNMLGKRLAAFITASQEKDDLLILFSKNILAFLILYFAQRLRMRKNYQYRRI
>NZ_CP018099.1|WP_006926561.1|3370207_3370762_-|T9SS-type-A-sorting-domain-containing-protein
MILSFCISIRLSLKTFLSPPLFFNRNTVDENFELLQKNKRQSSTSKVTNYAFTDRAVYNGFTYYYRLADRDMNGVITYHSTVNATPNAKGIDFKQRAVVIKEFALHANYPNPFNPETTIRFDVPTLNSELQHIKLSVYNSMEQLVDVLYEGAISGGQYEMNWNAVNLSSGIYFVTLQSEQLAQI
>NZ_CP018099.1|WP_006926559.1|3368349_3370101_-|T9SS-type-A-sorting-domain-containing-protein
MKGIIVYIVILLFFMNGLFANDPIAVFYFNGNLNNETSNGTLSVYPNTFSSTFGGSGDYTYWQWTANTNPGGGLTLDLTLDNIGDYSVGIRVEYETVTGYRKIIDYKNEASDNGLYFLDGVLKFFGSGSPSGTKTILANTMYDIIITRDGLTDTYTAYLVDTDGTVTEEFSFNDQGEGEPFNVGGGISRFGFFYDDQATNSEWTTGGKIYSMKVWDRVLSANEIKNALDPAVNVIFTNGSNYVPGGLTPGAINQPFGRFSLSTESGSSRFVGANFVLNGTRSGASNFKLWSSTDASFDPSTDIQLGATVLNDPGDGNSISFSDFSDDLQTTAKYYFVTCDLATDASGVIQGVVQNNAAIFLVAGTINTTLSNEPLSGGDVSLPVALTSFNAIAGDGVVTLKWSTASEVNNEAFLVERSMDGENFELFAEIKGQGSTSKETNYAFTDRAVYNGFTYYYRLADRDMNGVITYHSTVNATPNAKGIDFKQRAVVIKEFALHENYPNPFNPETTIRFDVPTLNSELQHIKLSVYNSMGQLVDVLYEGAISGGQYEMKWNAVNLSSGIYFVTLQSEKFTKTQKMILMR
>NZ_CP018099.1|WP_006926558.1|3367895_3368333_+|hypothetical-protein
MIEQLKPGLPRKWLLLFSGIIWSGTGIMLNFFALRWMVEFNLSQIIFVITAGILLGSAIARFGFSMVANKNIKRILAYTGHVCAFAFQEWKSYVLIAVMMTIGLFMRTTELIPKFLLAPLYMGIGFALFLASFLYYQSFFREPAK
>NZ_CP018099.1|WP_044281468.1|3366035_3367046_-|LacI-family-DNA-binding-transcriptional-regulator
MKTYPTIKDIAAKLNLHYTTVSRALRDHPDVNEETKRLVKETAQQMNYRPNYLARSLKRQKSNSIGVIVPEIKHHFFSAVISGIEEVAYEAGYVILVAQSNEQMEREILNLNAFISSHVSGLLVSISQTTTSSDHFKKFMEQDGKIVFFDRVCEDLEASKVVVDDYDGAYKATEYLIKKGYKRIGHLAGSKNLNIARNRYLGYKDALKNNGLTPNEAYVYWGGLQEQDGRNGMKALLELTERPDAIFAVNDPVAIGAYDVLKQKGLKIPDDMGIVGFSNNPISSFVHPPLTTVHQPAYEMGKKAAELLLQQIDSQVEEVSLVKEVLKTRLIVRESA
>NZ_CP018099.1|WP_006926556.1|3363171_3365895_-|T9SS-type-A-sorting-domain-containing-protein
MKRILLLFVALMFLAGLNALYAQVDFLNPYTPDEHTVLLLHFDGDLSDASGQTAGGTGYGDYSFVPGLANFDKCLYLNNSAISDSSRVLVPDTAALDLQGSFTLEAWVYFLTFGEGWSDWRGAPRILAKPYAVNSSYPNSWWFPNYWLMGDSYNDTYIFGGGFMGINPQDSSWVFNGDLRLDFNFVETMKWYHIAFIYNHDVYPRTEQLLIHDKDGNLLVMLHRTIEDTSYVIATSDWPLHIGEGGGGGNSWLDGFIDEVRISNIAREFSIPPIITGTTVPENTTDTEGPYEVKTIVTDADGLKSVVLKYNVGQDWIDLPMTNTAGDTFVAFIPGQQPGTSIKFYIEATDNNDQVAVDPLKAPEEYYSFAIIVEKALVFYLDFEEGSGQPIDKSPYATTCTINGDVSYVSDAVSGQYAAKFNPDGNGYITADPTPFMDCYEFTVEMWIKPNKLEQNLRLIIKEGSPTWYMPNYEIKGTASGQIEVGSYCDPGGWNNFTSDTALTMGSWYHLAYVFKDTVATLYILDAEDKIIEKVSRVALGKPIYTSGALHIGHAPGDAYGPYFDGLMDEIKIYNYAKQFEYKWQPFTPDEHTVLLAHFDGDLSDASGNLPDGVASSDKVGFVQSRPGMGQALYLDNSAEGGAYVTFADTSILDLGKKFSVEACFKILSKSDSWNNNPRIWSKCGDPWWTANYYGFVRADDAFLAGYYTGSAYYDNASEPGIFKPNTWYHMYFYYDEEYDYTYLVVHDTLDQIVFENTMPIGDLKDEYKTSFPLFVGFGGGGSDSYLNGYIDELRIQNYEFVTDIRDKEDMASVPVKYRLAQNYPNPFNPTTTISYQLPKTSDVELTIYNILGEEVRVLVNSKKTAGSHSVTWDGRDRSGKILPSGVYFYRIKAGEFSAIKKMILLR
>NZ_CP018099.1|WP_006926551.1|3362351_3362945_-|DUF4382-domain-containing-protein
MKLKRLFTFLSGIFCALLLMCCNDHLGSSPDPAVLRIYLVTNPADTTIQIGFDSLTVTTKDDFSLTISQMKVYSQEGIYAKLFSSFSGYKDEETEYNLLERQSGSFIPQKIVESHIPPNQYQRIEFVVYPPDEVTIHGLTFPIDIPEGYKPLITMECPFIADENEEHNIYIQFNAFKSIKRWRDTYIFTPSFELINK
>NZ_CP018099.1|WP_006926550.1|3360885_3362337_-|hypothetical-protein
MKKNNKLYKIAILLIGLFLAVCCTYSTKPKDPNKLPNTTVANIPVDGDTINAYVTIHWDGEDSDGYVTSYKYRYITYHLTKGDTVVTDWVTTNLTSKTIAFESSDELNFQHFEVKAIDNEGGEDPTPAVKEFYTVKAYSPETYIVSPQENQDLFILPQTTDWWTGIKVVFGSKDRDGEVVEYGYRVDGQGDWTWLEDTMAVLTPDEFALPLTGTHVIEVVAKDNTGIVDPTPATVQIVLFEPTFDKNILIIDETKEGDQTPGFTTDAQVDSFYNELFNPDTTIDYFTSGLPPKHILGRYKLLIWHSDYNFDRHNIGNEKDYIIEYLQAGGKLVLSGWRIIKSFDLGASFPQVYESESFLSEYLHVVGANESPSVDGAFAWARGRNGYPDIHLNKEIRAINDFPYFGGLTNVNIITPGAFTRVIYRFQCKETTSDNIRSVFQDRPCAIRYLGSSFDIILFGFPILYINPDEAKLMANKILEDLL
>NZ_CP018099.1|WP_006926549.1|3358083_3360864_-|TonB-dependent-receptor
MKESRNILWSILILCLMVFYAHAGTTGKIAGIVIDKETGEPLAGVNVFIPGMNLGASTNINGEYYIIQVPPGIYTIKASMIGYATEVKKNVEVRVDLTTKVVFKLTKTILEGEEIVTIAERPLIQRDLTSSKRSSSKAEIENIPAAENAMDVLSVIPGAIVATVNPVLNVGGGHTLKAQDENIKNIHIRGGGGGEVLFQVDGMPVNHPIFGGHSVLNIDIKSVEEIEVLTGGFSAEYGEAQSGVINVITREGGEHYQADFTLKHDDFLPVTLNNSEGYEYGSFYLEGPEPLTSKWLPELGLKFLSNTYLFVSGSFKRTNTQFNNHRTRQVKRLLGFFNVKDKQYNEYTFNIKISHHFSPTKRLILNYQRNDSWWSNFDWGGKNIPDSLGDAKSTNNYFVLSFKNTISRSTFFNVHVSYLQVRYHYSLYGKTPDAFWRWVYNDKTKNWVYRGANFFEDLNHDGFVEIGQDTDYRNDLSKVLTTKFDITSQINRSNLVKMGIEYQYKDLLYTNIQQGGWYLTPYGQYVFNGADYVPQPPGPFPEYGLFRWYFKAFPSQGAWYIQDKLENSGLIINAGLRYDWIMPGSSVEKESFRERWERVTGLKLNLRKFKGYFSPRLGISFPVSVKTVMYFSYGHFQQMPSSDNLYRDPYSNTFCGNPDLDPQKTVAYEFGFAQQIGSDFAIDIKGYSKDISNTVVNGLVQPEKGRPIWLAQNMGYGRARGVEINLKKRYSGFTSGILTYTLQWANGYTSSPFELYQRSQTNLPLPIREHRLDWDKRHQLLLQFTIDIPKDKALRVFGLKIPGNWSLTINSSASSGNPYTPGSTEIYVPPNSKTAPFIANTDLRFKKKWNIGKMHVGLTLDITNVFDRNNVNTGWGFNPWTGKPYVYGDVNNPFPYYYTWMEILRLRDPRMFMPGRRIVLGLNFGF
>NZ_CP018099.1|WP_006926548.1|3356295_3358068_-|hypothetical-protein
MKNIIFCTSVLLMVMAGAGLAQDVNPTIDYKVHNVGAFRQVVTNTGALWRQQSRYPGLIYCEFPLGSSEEHLGEAGFALAAIVKGDTLVTSSDSWDEADEMYPTDAPWDTIWVVKRGQRVDIGDPDDPYWPDYVGISDQDFVCKYSDDFYTKITGHRPMHIECIQRSMVWSFAPFNEFLILQFWITSKVDTLEEAYFAWFCDGNVGERLPGWDFALDDFSWYDETKDVAFAQDAEGGVDGLAYSPIAYKIFPPDNGGQIKTTFLWYSGWGEIASNHQELYRRLSSGEIKRNQVIPVGSQFWLTKGPYTILPGDTLLFTVVQLLGNGVKGIYKNLELAEWLINKNFAVPSPPPNPPLQVKADNHKVILTWKPDAENYHDPNRGDNVEHPFEGYRIYKSPQGYGGPWTLLAQFDKEDNFYGPNTGLKHEFIDEGLLNNFTYYYSVTSFSLPDTVLGITELESSLQENIVEVSPGPAPPETVGKVAVVPNPYLGNEDYTSYNPPWESPPPGRVWMEQDRKVQFINLPQRCTIQIFTLSGELVKVLEHNDPKRGYEEWNLVSQVGQAIASDVYLFVVKDLNNGNVQVGKFVVIK
>NZ_CP018099.1|WP_006926563.1|3376125_3376407_-|CRISPR-associated-endonuclease-Cas2
MSHWLVLYDIRDAKRLRRVAKTIQNYGTRAQKSVFELEVEAEQISKLRKEIQKIIADEDYVVYFNLCEADWQKREKYGKGRYDEEPNEEYYIY
>NZ_CP018099.1|WP_006926564.1|3376403_3376679_-|CRISPR-associated-endonuclease-Cas2
MIYLVCYDIAERKRLQRVARFLEDQGLRVQKSFFQCDVDAQRMAHIRREVRKLIDEKEDAFFIYPLCDKCAQHPLSDGNGELLKLEPFEIL
>NZ_CP018099.1|WP_006926565.1|3376675_3377758_-|CRISPR-associated-endonuclease-Cas1
MSTVYVAADRARLTKSGQTLVLKYEDNTQRVIFPFRTDQLVLIGNIDITTPALKLLMHHQIDTVFLNKNGKFNGKITFNRGKNIFLRLRQFRLLDDEKFSLQMARAIAGGKIRNQLVFAQRIRRERKAAEVTQAIGQMNDLLKKVQEADSKERLRGLEGSAARLYFSIYKYAFLVDWADFPGRSMNPPKSNVNAVLSFLYTLIKNRVEAALETEGLDPYASFFHALNYGKVGLAFDMMEEFRVPLSDMLTASLFNLGILDEDDFREVNFRSDDDEFPLEMEIVKEGDEPQILPRSSVGILLTKKGLTRVITHFEKRLETEIMHPWAERRMSYKQIIRYQARHLRRVISGEEQYYQPFGIR
>NZ_CP018099.1|WP_006926566.1|3377789_3378944_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MNSTKIVFDCRLKTLTPVHVGSGKNYLRNADFEIFQNLLTVYDSHRLQKKIEQADPSIKDAYFKELQTEGPSLYKFFRRVGWQSNEFVRYRLPVDSININEIKSQLRSGLGVPLIPGSSIKGALRTALWGYLLEQAPDARQIDRLLPQSREVRDKYAAQKVEKYLFGDHPQNDWLRALQVEDAAFEKEELALFQVKILTRTRQGYAFKLLGKERKNLSRERARQATSIVLEALGADALSQTTRVVLDRFLLEHEKFKPTPFSLPSADEFWPRVHAHFLKLAEGEKDFFEEMEFREVKRFYERSILERKFAENEYLVRLSWGGGWRFMTGDWLTPAQKEMVRRIYNLGKGEAEDFPKTRRLVVQNDLPSVPPGWATITVKAVRAV
>NZ_CP018099.1|WP_006926567.1|3378940_3379960_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MNYAIFRLTFETPLRIGEEGIGAEKLVPYVPSDTLWGALVSAHFTLGLPFDFDDLPFYLSSAFPFFKERLFFPPPLGALDYLLDGLDETQPGRLKDLKKIKYVDQKLFEALINGRQPALKELHFYATQREFLTLEEIDGLQKGPLFGIYERPRVTVDRFTGSGAEGQIFYFSQMTFAKGAGLFFLAEFKDERARRHFEAALRLLADEGLGSDRTVGRGFFRFESAEMELDAPQQSAFFTTLSLYFPQPTEVEELLESGARFKLARRKGYAAHFQARGKRLGQTLMFGEGSLFKRPAGAMRFPGTNPVVLQKDALPDVPFNVYRYGRAFDIPTIIAKEAP
>NZ_CP018099.1|WP_006926568.1|3379963_3380689_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MAENKAILSKKIFIRGEIQARTGLHIGGSSLGMSIGGADSVVIRDPISNEPYIPGSSLKGKMRSLLEKLEGQFYIKNGDYLPSKDVNHRIGKVFGVSADKETESTPTRLIVRDAHLSNADALADAENTDMPFTEIKTEVTIDRLTSKANPRQIERVPAGALFEMEMVVNVYEEDDEEELLNTVFDALKLVQDDYLGGNGTRGYGKVCFTVRQLTYKDRKAYLENGTEKEMDFEVPAELKGE
>NZ_CP018099.1|WP_006926569.1|3380732_3381119_-|type-III-A-CRISPR-associated-protein-Csm2
MEPLTFKTDWIKIGGASKEFVDFANQFGRVLKNGRLTSSQFRNFYSTLKTIEMKGFKNTKTKFYMLKPLLAYGQARQGSRGYGEFKKVMDQCLDFIMNAEEDKQEHYFKNFCRIVEAILAYHRAHGGN
>NZ_CP018099.1|WP_006926571.1|3381135_3383649_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MVKDIVLAGLLHDVGKFAERGSPQEFSFSDAEAARFQWAHAAATEKFLRTRIQWDGSRQPPWFNYAAMHHKPSDSSPMEWMIAEADRLSSGMERASYAADEREGGTQKFKTPLKPVTEFVALEDDGQAIEGRYYLPLRALQPDEANAFPREAPESLDLRDDYQALFRQFDAEFEKLLRHDIDQKIDTLYFLLQKFWWAVPSTTRKRDFPDVSLFEHAKTTAALASCLYVFHKADNTLNDVEKIKNRAQKKFLLFSGDLGGIQNFIYQISSKGAYSLLKGRSFYIQILSDLAAEHFAEALGLTRVNIIYSSGGKFYLLLPNTPQTIETITGVSQAVNEDLFDKFSGAIHLRSAFTELSGDDLMLKNGRLWQKWEAVNRGLQRQAQQPFITLLKNRQKYKDYFGPGKGDLKTCDACHGEAEERELKTINNAQLCPVCVELLKKGEQLKKARYLVLTREKKAGSKFDLFLGKRIYLHQKLDTEWLQKLKSGDQIFQFNDTCYDALFENEWFKNRLPKERLGAADLARFQLGFKHYGGTRKLDATFDEIAGRGQTGFEKLGVLRMDVDNLGMIFSRGLRHYRVKSAEGEGNGHFYSLARLTTLSGQLSLFFSGYLNQLIADEEAARCAIVYAGGDDLFIVGAWDVVMEKALEIRKKFAAFTCYNPAFTMSGGLTITGGKFPIYKSAEYAGQAEETAKKFSVHGLSKNAFTAFGLPLSWNEWFELENLKEQILQNIQKADGRYDRALVNHLWRIVEEYQKRYLELQRQSFNAAQIKNLARHERWLWRMVYDLTRFKERNRSLSPLIDELMRLLAGDEREKAGARPFIELLPTLTQWVDYLTR
>NZ_CP018099.1|WP_006926572.1|3383641_3384568_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MSWQLAYQTMEMALHFEKPVIFNRHPVFYFRSLLGKELFYLICPFRSRMCERCTLRFKCAYSFVFESPVTRDNPVLYGRNFASHPFVMSSDVGESQSTERLNLKMILIGQAAEYIPIIFWSFIRAGETGIFKNRVRYKIDELKINGQPSFKDEKLNLPGGPYHWQLLEEETIKKGKLFLEFLTPVRFKKDGRYLKEMSVEDVLQAAKRRMEILVGTYGAKDFVRMPFPQIEVFSENAQMQWKDYVRWSARQKRQMRLGGVVGILSVEGQFSAMALSLLKGAEIFHVGKNTSFGLGKIKVTFVEGEVHG
>NZ_CP018099.1|WP_006926574.1|3385124_3385769_-|nicotinate-nucleotide-adenylyltransferase
MSRSSPALATKLGLFGGTFDPIHHGHLIIAEWIASELGLERVIFIPVAEHPFGKRERITPAFHRLEMVQRALDDFPHFVLSDVEIRRGGVSYTIDTLSYFKQTWPLAELYFFIGGDNLAEFHRWREYKTLLKMARFVVYDRPGGELPAHLPKEKFLFVKAPLIEISSSLIRQRIKTGLPCRSLLPPPVWRYIEEHQLYGYREAGDSGFRRARPE

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Crispr_ID: NZ_CP018099_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018099_7

3698793-3699075

Orphan

Consensus_repeat	Method
ACAATACTTTTTTATTTTCGAGACCGACCCGTTTCCGCAGGATCCCTACGGGACAACC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP018099_7

>merge|NZ_CP018099|7|3698793-3699075|PILER-CR
ACAATACTTTTTCATTTTCGAGACCGACCCGTTTCCGCAGGATCCCTACGGGACAACCACTCCGCCACCTCTCCAATTATTTTATCTTTATTTCTAATTAATTCAACTTTAAACTATGCTTTTTTATTTTCGAGACCGACCCGTTTCCGCAGGATCCCTACGGGACAACCGCTCCGGCACCTCTCCAATTATTTCATCTTTATTTCTAATCAATTTAACTTTAACACAATACTTTTTTATTTTCGAGACCGACCCGTTTCCGCAGGATCCCTACGGGACAACC

>NZ_CP018099|7|6|3698793-3699075|PILER-CR
ACAATACTTTTTCATTTTCGAGACCGACCCGTTTCCGCAGGATCCCTACGGGACAACC	ACTCCGCCACCTCTCCAATTATTTTATCTTTATTTCTAATTAATTCAACTTTAA
ACTATGCTTTTTTATTTTCGAGACCGACCCGTTTCCGCAGGATCCCTACGGGACAACC	GCTCCGGCACCTCTCCAATTATTTCATCTTTATTTCTAATCAATTTAACTTTAAC
ACAATACTTTTTTATTTTCGAGACCGACCCGTTTCCGCAGGATCCCTACGGGACAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018099.1\|WP_006926850.1\|3708532_3709354_-\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP018099.1\|WP_006926840.1\|3698419_3698662_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198396
NZ_CP018099.1\|WP_006926845.1\|3703630_3704557_-\|COX15/CtaA-family-protein	unknown	unknown	gnl\|CDD\|367131
NZ_CP018099.1\|WP_006926849.1\|3707585_3708536_-\|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|274329
NZ_CP018099.1\|WP_006926837.1\|3694072_3696439_-\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP018099.1\|WP_006926833.1\|3689472_3691215_+\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NZ_CP018099.1\|WP_006926842.1\|3700842_3702231_+\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238520
NZ_CP018099.1\|WP_006926838.1\|3696603_3697728_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP018099.1\|WP_150109329.1\|3699979_3700819_+\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_CP018099.1\|WP_006926846.1\|3704842_3705244_-\|cytochrome-C-oxidase-subunit-IV-family-protein	unknown	unknown	gnl\|CDD\|131284
NZ_CP018099.1\|WP_006926835.1\|3692709_3693426_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP018099.1\|WP_006926843.1\|3702633_3703047_-\|DUF420-domain-containing-protein	unknown	unknown	gnl\|CDD\|377257
NZ_CP018099.1\|WP_006926839.1\|3697876_3698230_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380351
NZ_CP018099.1\|WP_006926844.1\|3703043_3703634_-\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP018099.1\|WP_006926832.1\|3687742_3689473_+\|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl\|CDD\|274323
NZ_CP018099.1\|WP_006926831.1\|3686623_3687640_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP018099.1\|WP_006926834.1\|3691180_3692713_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|274368
NZ_CP018099.1\|WP_006926848.1\|3705932_3707579_-\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|213748
NZ_CP018099.1\|WP_006926836.1\|3693554_3694052_-\|SLBB-domain-containing-protein	unknown	unknown	gnl\|CDD\|224512
NZ_CP018099.1\|WP_006926847.1\|3705250_3705901_-\|cytochrome-c-oxidase-subunit-3-family-protein	unknown	unknown	gnl\|CDD\|239213

Protein	Function_ID	Function_description	E-value
NZ_CP018099.1\|WP_006926850.1\|3708532_3709354_-\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	2.05224e-30
NZ_CP018099.1\|WP_006926840.1\|3698419_3698662_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198396	cd10449, GIY-YIG_SLX1_like, Catalytic GIY-YIG domain of yeast structure-specific endonuclease subunit SLX1 and its homologs. Structure-specific endonuclease subunit SLX1 is a highly conserved protein from yeast to human, with an N-terminal GIY-YIG endonuclease domain and a C-terminal PHD-type zinc finger postulated to mediate protein-protein or protein-DNA interaction. SLX1 forms active heterodimeric complexes with its SLX4 partner, which has additional roles in the DNA damage response that are distinct from the function of the heterodimeric SLX1-SLX4 nuclease. In yeast, the SLX1-SLX4 complex functions as a 5' flap endonuclease that maintains ribosomal DNA copy number, where SLX1 and SLX4 are shown to be catalytic and regulatory subunits, respectively. This endonuclease introduces single-strand cuts in duplex DNA on the 3' side of junctions with single-strand DNA. In addition to 5' flap endonuclease activity, human SLX1-SLX4 complex has been identified as a Holliday junction resolvase that promotes symmetrical cleavage of static and migrating Holliday junctions. SLX1 also associates with MUS81, EME1, C20orf94, PLK1, and ERCC1. Some eukaryotic SLX1 homologs lack the zinc finger domain, but possess intrinsically unstructured extensions of unknown function. These unstructured segments might be involved in interactions with other proteins.	4.32304e-24
NZ_CP018099.1\|WP_006926845.1\|3703630_3704557_-\|COX15/CtaA-family-protein	gnl\|CDD\|367131	pfam02628, COX15-CtaA, Cytochrome oxidase assembly protein. This is a family of integral membrane proteins. CtaA is required for cytochrome aa3 oxidase assembly in Bacillus subtilis. COX15 is required for cytochrome c oxidase assembly in yeast.	3.49601e-31
NZ_CP018099.1\|WP_006926849.1\|3707585_3708536_-\|cytochrome-c-oxidase-subunit-II	gnl\|CDD\|274329	TIGR02866, Heme-copper_oxidase_subunit_2, cytochrome c oxidase, subunit II. Cytochrome c oxidase is the terminal electron acceptor of mitochondria (and one of several possible acceptors in prokaryotes) in the electron transport chain of aerobic respiration. The enzyme couples the oxidation of reduced cytochrome c with the reduction of molecular oxygen to water. This process results in the pumping of four protons across the membrane which are used in the proton gradient powered synthesis of ATP. The oxidase contains two heme a cofactors and three copper atoms as well as other bound ions. [Energy metabolism, Electron transport].	3.50141e-69
NZ_CP018099.1\|WP_006926837.1\|3694072_3696439_-\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	1.65162e-70
NZ_CP018099.1\|WP_006926833.1\|3689472_3691215_+\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	2.21881e-151
NZ_CP018099.1\|WP_006926842.1\|3700842_3702231_+\|aminopeptidase-P-family-protein	gnl\|CDD\|238520	cd01087, Prolidase, Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.	4.30274e-97
NZ_CP018099.1\|WP_006926838.1\|3696603_3697728_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	2.48388e-84
NZ_CP018099.1\|WP_150109329.1\|3699979_3700819_+\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	8.25935e-83
NZ_CP018099.1\|WP_006926846.1\|3704842_3705244_-\|cytochrome-C-oxidase-subunit-IV-family-protein	gnl\|CDD\|131284	TIGR02229, hypothetical_protein, caa(3)-type oxidase, subunit IV. This model represents a small set of proteins with weak similarity to the sequences in pfam03626, which describes the cytochrome C oxidase subunit IV. [Energy metabolism, Electron transport].	1.24357e-14
NZ_CP018099.1\|WP_006926835.1\|3692709_3693426_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.9327e-90
NZ_CP018099.1\|WP_006926843.1\|3702633_3703047_-\|DUF420-domain-containing-protein	gnl\|CDD\|377257	pfam04238, DUF420, Protein of unknown function (DUF420). Predicted membrane protein with four transmembrane helices.	4.06139e-40
NZ_CP018099.1\|WP_006926839.1\|3697876_3698230_+\|cupin-domain-containing-protein	gnl\|CDD\|380351	cd02222, cupin_TM1459-like, Thermotoga maritima TM1459 and related proteins, cupin domain. This family includes bacterial and archaeal proteins homologous to Thermotoga maritima TM1459, a manganese-containing cupin that has been shown to cleave C=C bonds in the presence of alkylperoxide as oxidant in vitro. Its biological function is still unknown. This family also includes Halorhodospira halophila Hhal_0468. Structures of these proteins show a cupin fold with a conserved "jelly roll-like" beta-barrel fold that form a homodimer.	2.62533e-41
NZ_CP018099.1\|WP_006926844.1\|3703043_3703634_-\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	5.08074e-34
NZ_CP018099.1\|WP_006926832.1\|3687742_3689473_+\|thiol-reductant-ABC-exporter-subunit-CydD	gnl\|CDD\|274323	TIGR02857, transport_ATP-binding_protein, thiol reductant ABC exporter, CydD subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD.	0
NZ_CP018099.1\|WP_006926831.1\|3686623_3687640_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	3.03417e-121
NZ_CP018099.1\|WP_006926834.1\|3691180_3692713_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	2.01009e-62
NZ_CP018099.1\|WP_006926848.1\|3705932_3707579_-\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|213748	TIGR02891, Probable_cytochrome_c_oxidase_subunit_1-beta, cytochrome c oxidase, subunit I. This large family represents subunit I's (CtaD, CoxA, CaaA) of cytochrome c oxidases of bacterial origin. Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits I-III form the functional core of the enzyme complex. Subunit I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit II and heme a of subunit I to the bimetallic center formed by heme a3 and copper B. This cytochrome c oxidase shows proton pump activity across the membrane in addition to the electron transfer. In the bacilli an apparent split (paralogism) has created a sister clade (TIGR02882) encoding subunits (QoxA) of the aa3-type quinone oxidase complex which reacts directly with quinones, bypassing the interaction with soluble cytochrome c. This model attempts to exclude these sequences, placing them between the trusted and noise cutoffs. These families, as well as archaeal and eukaryotic cytochrome c subunit I's are included within the superfamily model, pfam00115. [Energy metabolism, Electron transport].	0
NZ_CP018099.1\|WP_006926836.1\|3693554_3694052_-\|SLBB-domain-containing-protein	gnl\|CDD\|224512	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis].	8.07375e-07
NZ_CP018099.1\|WP_006926847.1\|3705250_3705901_-\|cytochrome-c-oxidase-subunit-3-family-protein	gnl\|CDD\|239213	cd02862, NorE_like, NorE_like subfamily of heme-copper oxidase subunit III. Heme-copper oxidases include cytochrome c and ubiquinol oxidases. Alcaligenes faecalis norE is found in a gene cluster containing norCB. norCB encodes the cytochrome c and cytochrome b subunits of nitric oxide reductase (NOR). Based on this and on its similarity to subunit III of cytochrome c oxidase (CcO) and ubiquinol oxidase, NorE has been speculated to be a subunit of NOR.	2.25253e-71

>NZ_CP018099.1|WP_006926840.1|3698419_3698662_-|GIY-YIG-nuclease-family-protein
MYYTYVLESLASGRHYFGHTQNLEERLTRHNSGKVRSTKAFRPWRLIYYEEFATRSEAFQREQFFKTIEGRQWLKGRGIL
>NZ_CP018099.1|WP_006926839.1|3697876_3698230_+|cupin-domain-containing-protein
MAVKEMKKIPVQPVSVGKGAFIQILIGAEEAPHFFMRRFIIEPKGHIPKHTNTVEHEQLVLRGKGRIGIGDEIFTVKKDDVLFIPANMPHWYENIGDEPFEFLCLIPNKEDKMQLLD
>NZ_CP018099.1|WP_006926838.1|3696603_3697728_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MFHDYRKLFPITSQKIYLNHAAISPFSTRVTERLEWYLDERQFGTIDVFKKADELRNKTRNLLARLINARPENIAFITNTSEGFNHLVNGLEWQAGDEVLVPDCEFPSNMYPFLNLERKGVIVKKISSPDGLVDLEKIKAAITSKTRLLSISFVEFSSGFRNDLQAIGQLCKEQGILFSVDGIQGVGALPLDVQACHIDFLSNGGHKWLMGAMGAGFMYIAPELFSRLHPAFTGWLAVENAWDFFDYQLEFLPDARRFEYGTSNFIGITALSASVELLMEANPGKIQEHLFKLGEMLVEELEKIGLIFVNTKDRHHWSGIYSFKAARAEELFEELKKHQVVASLRNGLIRLAPHFYNNDQEIEQVIKIIKKFYK
>NZ_CP018099.1|WP_006926837.1|3694072_3696439_-|polysaccharide-biosynthesis-tyrosine-autokinase
MSSEKMNMGEGYPGNGKPLAQSYTGFENEEEVMKLQDYLQIILRRKWIVLVSFLVVFLTAVVYTINSQPVYQAQATVLVNTQSKGQGGLLLFDPTGLGFAQNLNNELEILKSRSVANAVARELLAKKYYDNSQEILHCIRAPEEDELGREILSEEELTGVLIRTVEFEPVRDSEVIKIIAKSGDPRDAALIANQFARAYYERNLRMSRTRSKAAREFLEKQLIAKQEQLAKAEEALQRYMEQTGIVSVDDESQKVIEQLATVQAQYENVSIELESVKESLNFYRKQIARQEPNVARIMSDASDPYIRLLQEEIARLEVEKDITISQNPHAAEDPIYKEKLIKIDSQIDNLRKKLRKRTNDYLKSVLPGQLTDPAKYLVEVKQKIFDTQIQVQALEAKKKALAVVLLDYQKQFDRIPKRSIEFARLQRARLSAEKLYLLVEEKYQEATIAEQSQFGYIEIIDQAIVPKLPISPKIRMNLMLGALLGLGLGVGLVFLLEYLDVSIRTPEDLKRRGWQPLSVIPSMDSQMIAELAQNKENPAIDDHLIALLSPRSSVAEGYRRLRTNLQYARLDKPLKSFLVTSPNPKEGKTTTASNLAITFSQAGLNTLLVDTDLRRPAIHRLFGLPKEPGLTNHLFGQNTLDEITHKEVIPHLSVMTSGLVPPNPSEILAAPQTHELIDRLKSMYDLVIFDTAPVLAVTDASILATQVEGTLLIILAGTTIFDELEHSIEQLERVNAHILGVAMNNFDIKRAYGSYYGQYKSRYYGYYGYYTYGHTGGKKAKKKRTETS
>NZ_CP018099.1|WP_006926836.1|3693554_3694052_-|SLBB-domain-containing-protein
MRKWLFALGLFVMAVGPLFAQTDQMNMAARNMTGKSVNYYYAKPGDITITVSLWGFVQKPGLYEVASSTNLIELLSLAGGPGTYADLDDVQIIRSYKDKNGKTYKKELTINLKKMLSLSEEQIRLQPGDVIYVNHTNWYTIKEAFSLTSSVALLFSAMYYLTRIF
>NZ_CP018099.1|WP_006926835.1|3692709_3693426_-|response-regulator-transcription-factor
MNRNVLLIEDDTEICALLELHLRDLGIDLDVANQGDRGLERALKNDYQLVILDVMLPALDGLEVCKILREKKKKLPILMLTARSEELDKVLGLELGADDYITKPFSIRELLARVKTILRRIKAYEESNESDGPEEFKTGDLAVNVAKRRVLLKNKNIELTAKEFELLKLFISNPGRAFSREKLLNMVWGYQFSGYEHTVNSHINRLRAKIEDDPSNPRYIKTVWGVGYKFMDEDDVGQ
>NZ_CP018099.1|WP_006926834.1|3691180_3692713_-|HAMP-domain-containing-histidine-kinase
MKTILKSLFGKIALIFLIQILALSAVQMYLSLTCTFDYYYEKDQKLHAKTAAALARMIEERVKAGCSLTTITNDTQNLTLLNPDAHIYIVDQTGRILQTLTDASEIKRKKIDVQPILEFIAAKDQNLKEAVFIDNPLDPDGKVIFSASPLHLDDQYAYLLITYNVPLNTLSLQSIMDSGVLQNTALAAMLAVMFSLFAGFLVFFFLNKRLQIMRNVVNFFKNGKYDARIPITSRDEIGELGVAFNNMASAFETYLRDLERNDRMRREFIANISHDLRSPLASTRGYVETLMIKDEKLSQKERKKFLQIIHKNVVHLSELVSELFELAKFDAKQIEPAIEPFSIAELAQDIVLKFQPQSESLNINLISRFPKNLPLVMGDIGMIERAISNLIQNALKFSGKGATVNLELLKAENHVIVKIADNGPGIPVEDLPYVFERFYRVDKSRNRKSGGSGLGLAIVKKIVEAHGQKISVKCNPGSETVFSFTLPVWKKDLSQPRNKIKQTISSPEKS
>NZ_CP018099.1|WP_006926833.1|3689472_3691215_+|thiol-reductant-ABC-exporter-subunit-CydC
MSAIFRLLKLVLPYKKWIALSVFLGLLTIASSIGLMMTSAFVISMAALHPSIAEIQVAIVGVRFFGISRGIFRYLERLISHNTTFRLLSHFRVRFYAALEPLVPARVAHLKSGDLLQRIVADIQNLENFFVRVIAPPSVSVLTALLMTLILWAYHINFALAFITFYALAGTIIPYLSVQLSRGMGKQITVLKNQLNVALLDHLNGLPELLINRQIENQEEKIKVLNKKLSRLQRNMLIIDALHQGFVTLLMFGAVVMVLIVGIPMVENNMLNGVYLAVLVLGVMAAFEGVLPLPQMAQYLEENNEAGKRLFEIIDRPPQVVDPQQPIPFPNEQPVRFAVNNLTFAYNNTQQPALKNLRLEIPYSSKVAIVGPSGSGKSTLARLLIRLYDYQSGQILLNERELKNYRQTDIRENIGYASQSFHLFTGSVADNLHLVNPEASERQMLDVLRLVNLSDLSHTPQDTLNYWIGEHGNRLSGGQAQRLALAQVLLKNSPVLIFDEVTSSLDAETERLILKNIFDHFKEQTIINITHRLNNMEHYNMIFVLNEGELIGRGTHHDLMRENEHYRHLFKIFQESLLFA
>NZ_CP018099.1|WP_006926832.1|3687742_3689473_+|thiol-reductant-ABC-exporter-subunit-CydD
MNIDRRLIRLLKNLRWPFILTLFFALLSVIAIVLEAKYLSAIIDLSFLKKQSLGNLLDLLLIFILVILARFLFQWLSDSFASHLSARIRHDLRNQLVRHLQGVSPVVLNLEKRGELINTLQQGVESLDAYFRSYIPQLFRAAAFPIVILMFVFPIDLLSGFVFLFTAPIIPVFMVLIGQHAKKATQRQWKTLSFLSAYLLDVIEGLTTLKILNRSQSQITRIRLLSEQFRHNTMSVLKIAFLSALVLELAASLSTAVIAVEIGLRLLYAKISFSQALFVLILAPEFYQPMRQLGASFHAGMEGMEAARRIFEIFTIRGRSTPKQSAQLSFSSSLSIELQKVSFRYPQTDTEALSDISLKIEAGKKYVIIGPSGAGKSTLFNLLLKFIAPTQGRILVNGNDLQQINDDFWFKQISWVPQKPYLFHDTIEANLKLVNPMASAEDMVRACKTARLHDFIMSLPDGYQTIVGERGARLSGGQAQRLALARAFLKDAPIILLDEPTANLDPQLDREIVEIMRQFPDDTTQIIIAHRFTTLKNADLIFVMVDGKLTDVGSFAELTASGKYLHRMAEELRGMS
>NZ_CP018099.1|WP_006926831.1|3686623_3687640_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MEYLNTIWFILIAVLFIGYFFLEGFDYGVGMLVPFLGKDDIERRVIINSVGTFWDGNEVWLLTAGGAMFAAFPNWYATLFSGFYLALILMLVGLIVRGVAFEFRSKDDNPKWRNFWDWALAVGSFIPALLWGVAFTNIWMGVPIDENMHYVGGFFNLLNPFALIGGLGTLTIFLLHGALFLSIKTEGEIEQRARALAAKLWIPTFIVYVLFIIVGYLKTNLFFKFGVNPGIIPIFTVLSLISTYFFIKNGKMGWAFILNGLTIVLTTVTIFMSMYPNVMPSSLNPEWSLTIYNASSSPYTLKIMSIVALIFVPIVLAYQSWTYYIFRKRVSTKSKLTY
>NZ_CP018099.1|WP_150109329.1|3699979_3700819_+|cation-transporter
MALNFAITIAELIGGLLSGSLSLISDALHNFSDGIAIIISYIALKLKKRSVTPRHTFGLKRAEIFAAALNSGVLLVITLYLFYHAAIRLINPAVLKGDLMIVVAGIGLIANVIGTWLLARPAKNSLNLKSAYLHLLADAISSFAVLLGGVAIYYWNIFWVDPILTILIGLYILKESYHILQGAIHILMEGAPTNISIDEVKQAVESLPEVNNLHHIHLWMVGDNDIHLEGHVDVEDMLLSESGQLLNKIEHLLQDKFNIKHVTLQLECNHCSNAHMIGH
>NZ_CP018099.1|WP_006926842.1|3700842_3702231_+|aminopeptidase-P-family-protein
MFNIETYKDRRQRLKERMKDGILLFLGNNESPMNYPANVYPFRQDSTFLYFWGLDQPALAAVIDLDQDKEIIFGDDFSVDDIVWMGPQPKLHDLCAQVGVQTVKSSADLANFIFRALQKGRPIHFLPPYRHDNMIKLQEILGIRADYLKNYVSVPFIKAVVELRSVKSEEEIIEIEKALDITYQIHLEAMKLIRPGLKEYEISGVLKGKAMSLGGSLSFPMIFSVHGEILHNPHQLNLMEKGQLVVLDCGGEAPSHYAGDITRTLPVSGKFSEEQKAVYQAVLSAQTAAIEMIQPGIRFRDVHLEAAKVLTLGLKELGLMKGNIDDAVQAGAHALFFPHGLGHMMGLDVHDMEDLGEEYVGYDEHTKRSSQFGLANLRLARELKSGFVVTVEPGIYFIPQLIDLWQQEQKFKDFINYDKLESYRHFGGIRIEDDVLVTENGCRILGKLIPKRIEGIEAIMQK
>NZ_CP018099.1|WP_006926843.1|3702633_3703047_-|DUF420-domain-containing-protein
MSVNDLSTVNAVLNALSFVLLLIGYHHIRHGRQAKHKKWMVGALISSMFFLISYLIYHYHVGSIPYPHYDWTRPLYFILLVPHIILAAAMTPFIFYMVYRALQGRFELHKRVARVVFPAWVFVSISGVLIYVMLYLR
>NZ_CP018099.1|WP_006926844.1|3703043_3703634_-|SCO-family-protein
MKRLKLIILFAAALLVILIIAMTVIQKAQNSLANLPRLYAVPEFTFVERSGQPFGLDQLKGKINVVDFIFTRCGGPCPLMGKSMGELYAAFSRSDKVQLVSITCDPDYDSLQVLQDYARDLGVTDQRWVFVRGEKEEMKNLYEQGFKLAGELPYDHSTKLILVDGEGWIRGYYDYDDPIDMDLLKQHIAALVRNLP
>NZ_CP018099.1|WP_006926845.1|3703630_3704557_-|COX15/CtaA-family-protein
MKKFKSFALFTTAATYLLIFIGGLVRVSGAGLGCPDWPKCFGRWIPPTDISQLPPDMDPNLFNFTLAWIEYINRLAGMTVGLLIAVLAVWAIVKFRDQKNILIPAVLSALLVAFQGWQGSKVVSSGLEPFVITIHMALAFIIVSLVLYVYLQSHLRLKNNQLLLVRQNIKRAVLGLYLISIVQIIIGTQIRSQIEHIQKATPLLETGAVLDLVGFTTPLHVALALGMIVSAIYLRTYFKSTERSIPAHIENLVNAAIILFVLQALVGMVLIWIDLPALGRVIHLWISSMIIGVLLTLFVFLKTKGKNV
>NZ_CP018099.1|WP_006926846.1|3704842_3705244_-|cytochrome-C-oxidase-subunit-IV-family-protein
MSQNQKDHILPLKVYLLSGAALLLLTVVTVAISFVHLGPFNLAVAMLIASFKASIVALIFMHLAYDNKLFLSIFLISIAFVTVFIVLTMFDTLRRGDLYQESAKPIQEQSIIYQKEQSPEAPKAPVEANSKAN
>NZ_CP018099.1|WP_006926847.1|3705250_3705901_-|cytochrome-c-oxidase-subunit-3-family-protein
MMEKTMQHTTFLQHHFADAEQQRESAKLGMWIFLVTEVLLFSGLFVFYAVYRALHPDMFINAHKYLDVYLGTINTVVLISSSVTVALAIRSLQLNKSKVAARYLLVTLLLAAVFLVVKYFEYHHKFELGQLPGKFYTFQGIEGTNPHVFFSIYFMMTGLHGLHVLGGMVAIFIMWIKTIKGHFNSEYYTPVENTGLYWHLVDLFWIYIFPLLYLIG
>NZ_CP018099.1|WP_006926848.1|3705932_3707579_-|cytochrome-c-oxidase-subunit-I
MSEGVNYLTAEKGWKSWLFTVDHKRIAILYMYSIMFFFLIGGLLALVIRLELITPEKVMLSADAYNKMFTLHGGIMIFLFIIPGIPAILGNFVLPLQIGARDVAFPKLNLASWYFYIVGAIIMVYSILKGGVDTGWTFYTPYSTSVTGPVVSMVFGAFIVGFSSIFTGINFIATIHKLRAPGMTWFKMPLFVWGLYATSIIQVIATPVLGITLLLLIMERLLGIGIFDPAMGGDPVLFQNFFWFYSHPAVYIMILPGMGIISELVTTFSKKKIFGYKAIAFSSLGIALVSFLVWGHHMYVSGQSELAAAIFSFLTFLVGIPSGIKMFNWLATMYKGKISLETPMLYALSFMFLFAIGGFTGIMLGALSTDVHLHDTYFVVAHFHYVMMGGTVMAFIGGLHYWWPKIWGRKYSEFWGRIAAGLLFVGFNVTFVSQFVMGMLGMPRRYYTYVEQYRAYHVFSSYGAFVIGLAFLIMACYLIYSIVKGEKVKDKNPWGALTLDWTTDTPPDPHNFERIPLVTDGPYDYDRIKIVEDRRVYKEEQAKESVLS
>NZ_CP018099.1|WP_006926849.1|3707585_3708536_-|cytochrome-c-oxidase-subunit-II
MNWFMNWLLPKGTSTVAAEVDALLQFIIVVSIILFIIVVGGTALFVVLYRKKKQEQVDFTKDLSHNTKLEIIWTVIPLILVTIVFFWGFKSYMKIRLAPGDAIEIKVTAQKWFWQFDYPDGVSNTNELVVPAGVPVKLVMSSQDVIHSFFVPNFRVKMDVLPNRYTVAWFEATENGVYDLFCAEYCGTGHSKMLGKVRVVSEPEYAAWLEENSSFGEGMSLAELGAKLYKSKACVTCHSVDGSPLVGPTFKGVFGHTVKLNDGSSVKADENYLRESILKPQAKVVEGFQPVMPTYQSILKPREVDALIEYIKSLGE
>NZ_CP018099.1|WP_006926850.1|3708532_3709354_-|SCO-family-protein
MSTFIQIVFLLILSVQAATGQVVRTSDPELNKIDVIEHLGAQIPLDVKLIDSQGQTHQLKDYYDGEKPVVLILAYYHCPMLCNLVLDGVTRALYSVRLKFGEDYRVLTISIDPRDTPQDALQKKESMLKRLQEPPDSDGWEFLVGEEKEVKRLADAVGFQYFFVEEKNQYAHPAVIMLTDGTGKLSRYLYGIEYRANDIKLGLLEAAQGKIGSTTDKILLFCFHYDPDAKGYVLFASNLMKAGGALTLAFLGLFIVYFRIKGRKQQTIQGTIS

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Crispr_ID: NZ_CP018099_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

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Cas_protein_info

CRISPR-Cas_info

NZ_CP018099_8

4498966-4500979

TypeI-B

Consensus_repeat	Method
GTTTCAATCCCACTCTGATTCGATTAAAAC	CRISPRCasFinder
GTTTCAATCCCACTCTGATTCGATTAAAAC	CRT
GTTTCAATCCCACTCTGATTCGATTAAAAC	PILER-CR

30 spacers

cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NZ_CP018099_8

>merge|NZ_CP018099|8|4498966-4500979|CRISPRCasFinder,CRT,PILER-CR
GTTCCAAACCTACTCTTGTTCGATTAAAATCGTAATTCGTAATTCTTAATTCGTAATTGAGTTAAAGTTTCAATCCCACTCTGATTCGATTAAAACCAACGTCGATAAACTGATTGAAGAAAGTAATAAGGCGTTTCAATCCCACTCTGATTCGATTAAAACTAAGCCAGATACCGGTGTACAGCCGAAGCTCAACGGGTTTCAATCCCACTCTGATTCGATTAAAACATGATACACAGGCTATACAAAAAGCTATTAATTATGGTTTCAATCCCACTCTGATTCGATTAAAACTCTGGTTAAACCGGTTAGCGATGCAATAAAGTTTTCACCGTTTCAATCCCACTCTGATTCGATTAAAACATTCCGATTCCTGACAGCTCCGCGGCCTATCTAAGAGTGTTTCAATCCCACTCTGATTCGATTAAAACTAAGAGGCAGGAAAAAAACAGTCAGATTGCATCCGTTTCAATCCCACTCTGATTCGATTAAAACGTTTTTTATTAAAACTAAAATAGGAGGGCAATAGCCGGTTTCAATCCCACTCTGATTCGATTAAAACTCGAGGTTAAATTTGTTTTCTTGCTTTAAAACTTGTTTCAATCCCACTCTGATTCGATTAAAACTCTATGGCCAAACGTATTTCGATAAGAATATATTGTTTCAATCCCACTCTGATTCGATTAAAACCTTTTCCCTTTATGTTTAGTTATGCTTATTTGCGCGTTTCAATCCCACTCTGATTCGATTAAAACTTTGGTGAAACCACTTCGTATACGGTTACACTGGGGTTTCAATCCCACTCTGATTCGATTAAAACTTGTTGAAATAGTGGAGCGGCCGGGCTATCATATCCTGTTTCAATCCCACTCTGATTCGATTAAAACCTTGTCATACAAAAATACATGAGCAAGAAAAAATGTTTCAATCCCACTCTGATTCGATTAAAACAAATTGCCCGGCTCTTAAATCTGTAAGCTTTTTCCTGTTTCAATCCCACTCTGATTCGATTAAAACAAAGTCTCTGCCGGATTCTTTCAAGTCCTATGAGCAAGTTTCAATCCCACTCTGATTCGATTAAAACTCAACCAAAAAAAAGGAGAAAAAAATGGAACACATGTTTCAATCCCACTCTGATTCGATTAAAACGTTTTTCCAGGTGATACAGTCTTGTGGTGTAAACAGTAGTTTCAATCCCACTCTGATTCGATTAAAACACAAGCACAACCTATTTTTAAAGTCGCTGTAACTCCTTTGTTTCAATCCCACTCTGATTCGATTAAAACGGTGTTTCCAGATCAGTCATCTACAAAGCCCTCAAGGCGTTTCAATCCCACTCTGATTCGATTAAAACATAATCTTACATTGCACAGATTCAACCTGGGGTAACCTGTTTCAATCCCACTCTGATTCGATTAAAACTCTGTGAACGGTCTTCCTTAAGCGCTTCGATCTGGTTTCAATCCCACTCTGATTCGATTAAAACAGCACAAACCGCCAATAAAATCAAAGCCTTTATTGCCGTTTCAATCCCACTCTGATTCGATTAAAACTCAAGCGTTATAAAGAACATCCGCAAGATTTATCTGTTTCAATCCCACTCTGATTCGATTAAAACAACTCATGAACAAAGACAACGTAAAGTGTACAACTTCGTTTCAATCCCACTCTGATTCGATTAAAACATAATAGCTGGCACTTTGGAATTATTGTTATTGATGTTTCAATCCCACTCTGATTCGATTAAAACCTATATTGCGCAAACGTTATTTGAACAAGAACGTTTTGTTTCAATCCCACTCTGATTCGATTAAAACGGCTTAATAAAAGATGCAACTCGCAGATTGTCCGGGGTTTCAATCCCACTCTGATTCGATTAAAACAGGCTAGTGTTTACGTGGCTACGCAACCGGACGCGGTTTCAATCCCACTCTGATTCGATTAAAACAAAACTATCTGAAGAAAATGATGGATTTGAATTAAAGTTTCAATCCCACTCTGATTCGATTAAAAC

>NZ_CP018099|8|7|4498966-4500979|CRISPRCasFinder
GTTCCAAACCTACTCTTGTTCGATTAAAAT	CGTAATTCGTAATTCTTAATTCGTAATTGAGTTAAA
GTTTCAATCCCACTCTGATTCGATTAAAAC	CAACGTCGATAAACTGATTGAAGAAAGTAATAAGGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TAAGCCAGATACCGGTGTACAGCCGAAGCTCAACGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATGATACACAGGCTATACAAAAAGCTATTAATTATG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTGGTTAAACCGGTTAGCGATGCAATAAAGTTTTCACC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATTCCGATTCCTGACAGCTCCGCGGCCTATCTAAGAGT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TAAGAGGCAGGAAAAAAACAGTCAGATTGCATCC
GTTTCAATCCCACTCTGATTCGATTAAAAC	GTTTTTTATTAAAACTAAAATAGGAGGGCAATAGCCG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCGAGGTTAAATTTGTTTTCTTGCTTTAAAACTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTATGGCCAAACGTATTTCGATAAGAATATATT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTTTTCCCTTTATGTTTAGTTATGCTTATTTGCGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TTTGGTGAAACCACTTCGTATACGGTTACACTGGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TTGTTGAAATAGTGGAGCGGCCGGGCTATCATATCCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTTGTCATACAAAAATACATGAGCAAGAAAAAAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAATTGCCCGGCTCTTAAATCTGTAAGCTTTTTCCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAAGTCTCTGCCGGATTCTTTCAAGTCCTATGAGCAA
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCAACCAAAAAAAAGGAGAAAAAAATGGAACACAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GTTTTTCCAGGTGATACAGTCTTGTGGTGTAAACAGTA
GTTTCAATCCCACTCTGATTCGATTAAAAC	ACAAGCACAACCTATTTTTAAAGTCGCTGTAACTCCTTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GGTGTTTCCAGATCAGTCATCTACAAAGCCCTCAAGGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATAATCTTACATTGCACAGATTCAACCTGGGGTAACCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTGTGAACGGTCTTCCTTAAGCGCTTCGATCTG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AGCACAAACCGCCAATAAAATCAAAGCCTTTATTGCC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCAAGCGTTATAAAGAACATCCGCAAGATTTATCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AACTCATGAACAAAGACAACGTAAAGTGTACAACTTC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATAATAGCTGGCACTTTGGAATTATTGTTATTGAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTATATTGCGCAAACGTTATTTGAACAAGAACGTTTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GGCTTAATAAAAGATGCAACTCGCAGATTGTCCGGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AGGCTAGTGTTTACGTGGCTACGCAACCGGACGCG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAAACTATCTGAAGAAAATGATGGATTTGAATTAAA
GTTTCAATCCCACTCTGATTCGATTAAAAC

>NZ_CP018099|8|5|4498966-4500979|CRT
GTTCCAAACCTACTCTTGTTCGATTAAAAT	CGTAATTCGTAATTCTTAATTCGTAATTGAGTTAAA
GTTTCAATCCCACTCTGATTCGATTAAAAC	CAACGTCGATAAACTGATTGAAGAAAGTAATAAGGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TAAGCCAGATACCGGTGTACAGCCGAAGCTCAACGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATGATACACAGGCTATACAAAAAGCTATTAATTATG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTGGTTAAACCGGTTAGCGATGCAATAAAGTTTTCACC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATTCCGATTCCTGACAGCTCCGCGGCCTATCTAAGAGT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TAAGAGGCAGGAAAAAAACAGTCAGATTGCATCC
GTTTCAATCCCACTCTGATTCGATTAAAAC	GTTTTTTATTAAAACTAAAATAGGAGGGCAATAGCCG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCGAGGTTAAATTTGTTTTCTTGCTTTAAAACTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTATGGCCAAACGTATTTCGATAAGAATATATT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTTTTCCCTTTATGTTTAGTTATGCTTATTTGCGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TTTGGTGAAACCACTTCGTATACGGTTACACTGGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TTGTTGAAATAGTGGAGCGGCCGGGCTATCATATCCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTTGTCATACAAAAATACATGAGCAAGAAAAAAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAATTGCCCGGCTCTTAAATCTGTAAGCTTTTTCCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAAGTCTCTGCCGGATTCTTTCAAGTCCTATGAGCAA
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCAACCAAAAAAAAGGAGAAAAAAATGGAACACAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GTTTTTCCAGGTGATACAGTCTTGTGGTGTAAACAGTA
GTTTCAATCCCACTCTGATTCGATTAAAAC	ACAAGCACAACCTATTTTTAAAGTCGCTGTAACTCCTTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GGTGTTTCCAGATCAGTCATCTACAAAGCCCTCAAGGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATAATCTTACATTGCACAGATTCAACCTGGGGTAACCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTGTGAACGGTCTTCCTTAAGCGCTTCGATCTG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AGCACAAACCGCCAATAAAATCAAAGCCTTTATTGCC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCAAGCGTTATAAAGAACATCCGCAAGATTTATCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AACTCATGAACAAAGACAACGTAAAGTGTACAACTTC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATAATAGCTGGCACTTTGGAATTATTGTTATTGAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTATATTGCGCAAACGTTATTTGAACAAGAACGTTTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GGCTTAATAAAAGATGCAACTCGCAGATTGTCCGGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AGGCTAGTGTTTACGTGGCTACGCAACCGGACGCG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAAACTATCTGAAGAAAATGATGGATTTGAATTAAA
GTTTCAATCCCACTCTGATTCGATTAAAAC

>NZ_CP018099|8|7|4499032-4500979|PILER-CR
GTTTCAATCCCACTCTGATTCGATTAAAAC	CAACGTCGATAAACTGATTGAAGAAAGTAATAAGGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TAAGCCAGATACCGGTGTACAGCCGAAGCTCAACGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATGATACACAGGCTATACAAAAAGCTATTAATTATG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTGGTTAAACCGGTTAGCGATGCAATAAAGTTTTCACC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATTCCGATTCCTGACAGCTCCGCGGCCTATCTAAGAGT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TAAGAGGCAGGAAAAAAACAGTCAGATTGCATCC
GTTTCAATCCCACTCTGATTCGATTAAAAC	GTTTTTTATTAAAACTAAAATAGGAGGGCAATAGCCG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCGAGGTTAAATTTGTTTTCTTGCTTTAAAACTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTATGGCCAAACGTATTTCGATAAGAATATATT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTTTTCCCTTTATGTTTAGTTATGCTTATTTGCGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TTTGGTGAAACCACTTCGTATACGGTTACACTGGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	TTGTTGAAATAGTGGAGCGGCCGGGCTATCATATCCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTTGTCATACAAAAATACATGAGCAAGAAAAAAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAATTGCCCGGCTCTTAAATCTGTAAGCTTTTTCCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAAGTCTCTGCCGGATTCTTTCAAGTCCTATGAGCAA
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCAACCAAAAAAAAGGAGAAAAAAATGGAACACAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GTTTTTCCAGGTGATACAGTCTTGTGGTGTAAACAGTA
GTTTCAATCCCACTCTGATTCGATTAAAAC	ACAAGCACAACCTATTTTTAAAGTCGCTGTAACTCCTTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GGTGTTTCCAGATCAGTCATCTACAAAGCCCTCAAGGC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATAATCTTACATTGCACAGATTCAACCTGGGGTAACCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCTGTGAACGGTCTTCCTTAAGCGCTTCGATCTG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AGCACAAACCGCCAATAAAATCAAAGCCTTTATTGCC
GTTTCAATCCCACTCTGATTCGATTAAAAC	TCAAGCGTTATAAAGAACATCCGCAAGATTTATCT
GTTTCAATCCCACTCTGATTCGATTAAAAC	AACTCATGAACAAAGACAACGTAAAGTGTACAACTTC
GTTTCAATCCCACTCTGATTCGATTAAAAC	ATAATAGCTGGCACTTTGGAATTATTGTTATTGAT
GTTTCAATCCCACTCTGATTCGATTAAAAC	CTATATTGCGCAAACGTTATTTGAACAAGAACGTTTT
GTTTCAATCCCACTCTGATTCGATTAAAAC	GGCTTAATAAAAGATGCAACTCGCAGATTGTCCGGG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AGGCTAGTGTTTACGTGGCTACGCAACCGGACGCG
GTTTCAATCCCACTCTGATTCGATTAAAAC	AAAACTATCTGAAGAAAATGATGGATTTGAATTAAA
GTTTCAATCCCACTCTGATTCGATTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018099.1\|WP_006928014.1\|4505656_4506448_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP018099.1\|WP_006928020.1\|4494509_4495838_-\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237000
NZ_CP018099.1\|WP_006928016.1\|4502433_4502943_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP018099.1\|WP_006928017.1\|4501386_4502391_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NZ_CP018099.1\|WP_006928012.1\|4507432_4509256_-\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NZ_CP018099.1\|WP_006928025.1\|4487284_4488235_-\|protease-modulator-HflC	unknown	unknown	gnl\|CDD\|259803
NZ_CP018099.1\|WP_006928010.1\|4510351_4510990_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP018099.1\|WP_006928026.1\|4486645_4487164_+\|ferritin	unknown	unknown	gnl\|CDD\|153113
NZ_CP018099.1\|WP_044281726.1\|4483843_4484281_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|376583
NZ_CP018099.1\|WP_006928011.1\|4509279_4510077_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|187889
NZ_CP018099.1\|WP_006928015.1\|4502958_4505676_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP018099.1\|WP_006928009.1\|4510986_4512297_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP018099.1\|WP_006928022.1\|4490020_4492237_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_CP018099.1\|WP_006928024.1\|4488227_4489220_-\|FtsH-protease-activity-modulator-HflK	unknown	unknown	gnl\|CDD\|259802
NZ_CP018099.1\|WP_006928013.1\|4506450_4507398_-\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP018099.1\|WP_006928027.1\|4484594_4486490_+\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341067
NZ_CP018099.1\|WP_006928023.1\|4489355_4490018_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|223777
NZ_CP018099.1\|WP_006928021.1\|4493059_4494487_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP018099.1\|WP_006928019.1\|4495875_4498548_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP018099.1\|WP_006928018.1\|4501102_4501366_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856

Protein	Function_ID	Function_description	E-value
NZ_CP018099.1\|WP_006928014.1\|4505656_4506448_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	2.15272e-26
NZ_CP018099.1\|WP_006928020.1\|4494509_4495838_-\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237000	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed.	0
NZ_CP018099.1\|WP_006928016.1\|4502433_4502943_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.22123e-61
NZ_CP018099.1\|WP_006928017.1\|4501386_4502391_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.01421e-167
NZ_CP018099.1\|WP_006928025.1\|4487284_4488235_-\|protease-modulator-HflC	gnl\|CDD\|259803	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prokaryotic HflC (High frequency of lysogenization C). Although many members of the SPFH (or band 7) superfamily are lipid raft associated, prokaryote plasma membranes lack cholesterol and are unlikely to have lipid raft domains. Individual proteins of this SPFH domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Escherichia coli HflC is an integral membrane protein which may localize to the plasma membrane. HflC associates with another SPFH superfamily member (HflK) to form an HflKC complex. HflKC interacts with FtsH in a large complex termed the FtsH holo-enzyme. FtsH is an AAA ATP-dependent protease which exerts progressive proteolysis against membrane-embedded and soluble substrate proteins. HflKC can modulate the activity of FtsH. HflKC plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection.	1.08011e-112
NZ_CP018099.1\|WP_006928010.1\|4510351_4510990_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.88954e-13
NZ_CP018099.1\|WP_006928026.1\|4486645_4487164_+\|ferritin	gnl\|CDD\|153113	cd01055, Nonheme_Ferritin, nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.	1.89714e-73
NZ_CP018099.1\|WP_044281726.1\|4483843_4484281_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	5.40511e-84
NZ_CP018099.1\|WP_006928011.1\|4509279_4510077_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187889	cd09759, Cas6_I-A, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	2.87688e-36
NZ_CP018099.1\|WP_006928015.1\|4502958_4505676_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	2.9853e-28
NZ_CP018099.1\|WP_006928009.1\|4510986_4512297_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.37062e-26
NZ_CP018099.1\|WP_006928022.1\|4490020_4492237_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	2.96369e-19
NZ_CP018099.1\|WP_006928024.1\|4488227_4489220_-\|FtsH-protease-activity-modulator-HflK	gnl\|CDD\|259802	cd03404, SPFH_HflK, High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prokaryotic HflK (High frequency of lysogenization K). Although many members of the SPFH (or band 7) superfamily are lipid raft associated, prokaryote plasma membranes lack cholesterol and are unlikely to have lipid raft domains. Individual proteins of this SPFH domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Escherichia coli HflK is an integral membrane protein which may localize to the plasma membrane. HflK associates with another SPFH superfamily member (HflC) to form an HflKC complex. HflKC interacts with FtsH in a large complex termed the FtsH holo-enzyme. FtsH is an AAA ATP-dependent protease which exerts progressive proteolysis against membrane-embedded and soluble substrate proteins. HflKC can modulate the activity of FtsH. HflKC plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection.	8.35686e-133
NZ_CP018099.1\|WP_006928013.1\|4506450_4507398_-\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.25229e-43
NZ_CP018099.1\|WP_006928027.1\|4484594_4486490_+\|M1-family-metallopeptidase	gnl\|CDD\|341067	cd09604, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains bacterial M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	9.49146e-118
NZ_CP018099.1\|WP_006928023.1\|4489355_4490018_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|223777	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism].	1.4865e-29
NZ_CP018099.1\|WP_006928021.1\|4493059_4494487_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP018099.1\|WP_006928019.1\|4495875_4498548_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP018099.1\|WP_006928018.1\|4501102_4501366_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.77345e-31

>NZ_CP018099.1|WP_006928019.1|4495875_4498548_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSQKNLKEEDLELQEWRESLQYVIERGGPERVKKLMSELQQQIYASGIKMPFTANTPYINTIPVEEQPPYPGSREIERRIKSIIRWNAMAMVVRANRIENGIGGHISTYASAATLYEVGFNHFFRAPGQDFSGDFVYFQGHASPGIYARAFLEGRISIEELKNFRHEYHKTAKGLPSYPHPWLKPDFWQFATVSMGLGPLMAIYQARFNRYLEDRGLKKPGGEKVWAFLGDGETDEPEALGAISLAAREKLDNLIFVINCNLQRLDGPVRGNGKIIQELETVFRGAGWNVIKIIWGSDWDALLAKDKDGLLVKRMGEVVDGEYQNYVVRGGAYLRKHFWGKYPQLLKLVEHLSDEQLAKLRLGGHDPEKVYAAYHAAVNHKGAPTVILARTVKGYGMGEAGEGKNITHQQKKLNEEELRQFRSRFGIPISDEQIDELPFYKPSPDSSEMRYLMERRQALGGFIPTRRTTSAVLVTPKDDLFSEFYEGTKEREVSTTMVFVRILSKLLRDQKIGKLIVPIVPDEARTFGMEALFRQVGIYSHVGQLYQPVDSESLLYYKEAKDGQIFEEGITESGSTSSFIAAGTAYANHGINTIPFFIFYSMFGLQRVGDLVWAGADMQTRGFLIGGTAGRTTLAGEGLQHQDGNSHLLAYPVPNLKAYDPAFAYELAVIIEDGLERMYEKQEKIFYYVTVMNENYPQPPMPKRKNIKEGIIRGMYLFKSSNLKNAKLHAQLLGSGSILNQVLKAQDILAEKYGVAADVWSVTSYKELHRDALMAERHNMFHPDNLQEPYVSKILKNSKGVFVAASDYVKALPESIARWLPGPLFSLGTDGFGRSDGRRHLRDFFEVDYRYITYATLYMLWKEGQLKMDVLKKAIKEMDLDVDKPNPMIS
>NZ_CP018099.1|WP_006928020.1|4494509_4495838_-|2-oxo-acid-dehydrogenase-subunit-E2
MAIEFKLPELGENIVSGRVAAVLIKEGDSVTADQPLAELETDKAVIEVPSPVNGTVKKVLIKEGQDVKIGEPMFIFEEESDEGQPTAQKADETTEKESPETSVAPDSVEMPAAADEAPIAAQPAPVIEEDVPAAPQVERKTGELAPAAPSVRRFAREIGIDINQVPGTGPGGRISIEDVKAYSKMLNKQRALQAGAATGVQAEPLPDFEKWGEIERQPMNRVREITARHLSYAWSTIPHVTQFDKADITDLEALRKKYSEQVQQAGGKLTVTAILLKVVALALKKFPQFNASIDLAKNEIIFKKYINIGVAVDTDRGLLVPVVKNVEAKSITELAVELAKISQKARERKLTPDEMQGGNFSISNLGGIGGTGFTPVVNAPEVAILGVSRSEIQPVYKDGQFVPRLMLPLSLSYDHRLIDGADAARFLRWICEALEQPFLLTL
>NZ_CP018099.1|WP_006928021.1|4493059_4494487_-|dihydrolipoyl-dehydrogenase
MSETLKTHLAVIGAGPGGYAAAFLAADLGMDVTIIDPEVNPGGVCLYRGCIPSKALLHVAKLLNESQEAARWGIHFQKPQIDLDQLRSWKESVVQRLTGGLGMLVKQRKIKHIRGTASFLDANTLKIIGVDGQKSQLQFNYAILSTGSRPAKIQALSLDSPRVMNSTRALNLEEVPENLLVIGAGYIGLELGTVYAALGSKVHVVEMLPNILPGADKDLSNVLYKSIEKKFASIMLNTRVAEMKALKNGVRVRFEGENVAQEEQTFDRVLISIGRTPNSDGIGLQNTRIKTDERGFIMVDEQRRTHEPNIYAIGDVAGEPMLAHKASHEGFVAVEAIHGQKAAFEPAAIPAVVFTDPEIAWAGLTETEAKKQGRKVEVARFPWAASGRAITMDRTDGLTKLIVDAESKRILGVGIAGPGAGELISEGVLAIEMAANATDLKMTIHPHPTLSETLMETAEMIFGTSTHIYRPKRGK
>NZ_CP018099.1|WP_006928022.1|4490020_4492237_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MKNFGKILLVLLIWHGAKAQNYLWPTSASDYLTSSFCEYRPGHYHSAIDIKTWNQEGYAVYAVEDGTVYRIRVSPHGYGKVIYLKLKDGRFAVYAHLQRFNRKLEEKVRQIQLKNRRYTIDWRPKRWPVKKGEIIAYTGQTGTGVPHLHFEIRDAQHRALNPLHFYRERVKDQIAPRLQELLIIPLNKNSVVNGSVLPKSIPLKKENGIYVLNETVYARGKIGLAIRGYDRANDVYNKYGFYREQLYINDSLIFEAKYDTLDFSKTSQINIGIYYPLKALQNKRFLKLFKEPYNQLDFYRTAPDGGVIYVKKQPVNFKIIIKDFWDNQSVVKGRILPAFNPPPQILYARRLKDQLFVKALLPRNLRTLDLLHPGAGGAWQKVRYYEIVQQEFRPHNQQILIKAPLNPVQTKKIKIVGVASDGRRFALLNDFAHSADTIAFKLINYGKYWVAQLSPPQNASLLDIETRLNGVVIHPVSNLNDRFLELVIPPGEGDKQTLQLRVAKFQKTVLDTTIHFAVLFPEKSQHIALFNDSLQIETTGQTVYDTLLFSARKNDSVLTLKDSLPILSAEYNFSWYPQPFRKGVRIVVKTDSTPLPTRTLGLYRFVSEKGLRYVGGQSGAARQTIVMRSKGLGSIVAAADTVPPAVEILFPAPNARLKALKFVKISAFDSLSGLDSDLNFRIFIDDQWMIPEWDPERKLVLATPHWKLKAGQHRLLVEVQDRAGNVSKQSLVFFIKGN
>NZ_CP018099.1|WP_006928023.1|4489355_4490018_-|rhomboid-family-intramembrane-serine-protease
MIPIADESPRGYRPYVNYALITLNILVYFFWQQHTQSFIYTYGLVPAKFFSLDYQPFATFTIFTSMFMHGGLGHLFGNMLYLYIFGDNIEYTLGHGRYLLFYLTVGVAAALLQTFLAPNSTIPMVGASGAISGVLGAYLLKFPRNRISILIFIFFFIDIIHVPAVFVLSLWFIFQLFNGWLSLIPGLQGGVAWFAHIGGFAAGFTLIKFFEPRKRWQVWL
>NZ_CP018099.1|WP_006928024.1|4488227_4489220_-|FtsH-protease-activity-modulator-HflK
MSANTGNFNLEDFKVPQFSPKIIKWLVLGILFIVLFFSSWFTIGAEEVGVVVRFGKYVRTVDPGLNFKLPFGIETVYKVPVQRQLKQEFGFRTLRAGVRSEYSSRRFQEESLMLTGDLNAAEVEWIVQYRIADPYLYLFKVRNAETTFRDINEAVMREIIGDRTVTEILTVGRQEIATTAERMVQELASQYYTGIKVDQIVLQDVNPPDEVKPSFNEVNEALQEKEKLINQARSEYNKVIPKARGEALRIIEEAHGYALERVNEAQGDAARFNQLYNEYRKAKEVTRQRLYLETMSEILSKVGRKLITDKEATGILPLFQLDVKGGLKNE
>NZ_CP018099.1|WP_006928025.1|4487284_4488235_-|protease-modulator-HflC
MNKRYLILGGIIVAALIVLFSAAFIVNETEQVIITRFGKPVGEPITTPGIHFKVPLIEDATFFEKRFLEWDGDANQVPTKDKRFIWVDTYARWKISDPLLFFQRVRDERGAQARLDDILDGETRNAVAKHDLVELVRSSNRKPMVIADTALAEEALEDVFPSIKYGRAKITREILLAAQERTKELGVELLDIRFKRINYVEEVQRKIYERMITERKRIAEKYRSEGQGMASQILGQKERELKRIQSEAYRTAQEIRGKADAQATAIYARAYDRNAESREFYRFLKTLETYRSTFGEKDWLILTTDNDFYKLLQKIQ
>NZ_CP018099.1|WP_006928026.1|4486645_4487164_+|ferritin
MLSKKLEAALNDQITKEFFSEYLYLSMASYCDSIDLGGFANWFISQAEEEHQHAMKLFKYVQDREGRVALGAMEKPQHEFKDVMHLFEQVLEHEQFITQSINKIYELAVNEKDYPTQVELEWFIKEQVEEEKQVSDIIKQLKWIKDNPTMLYMLDQQLGQRVPTSLPAEEQK
>NZ_CP018099.1|WP_006928027.1|4484594_4486490_+|M1-family-metallopeptidase
MKRMFAFLLVAFTLNGIQATASDSLYIPINLQQAYEKGTRAYDGSPGPAYWQNHADYVIQVKFEPERRMIFGRQKIIYYNESPDSLDRLVIRLYQDLFKKGNPRDWGVNPGDLHEGVKIDSLKLNDRPLDLTGNPFIRRYGTNMIIRLQNKIAPESTVKLEIEWQLQISRHSNIRMGAYDSTSFHVAYWYPQIAVYDDLSGWDTFNYTGLQEFYNDFNNYDVRISVPQNFVVWATGRLQNVEEVLQEKYQKRYQKALESDDVIHVITEEDLEKGKITADKEWNTFHYVARNVPDFAFSTSDHYLWDLTSVQVAPDRERVLVGAAYKAESSDFYKVAELSRKSILFFSNEMPAVAFPYPSLTVFNGRGGMEFPMMVNDGSVANWQGTVHLTSHEIAHTYFPFMMGTNERKYAWMDEGWAVMLPFDFQAREAPGYDPIEKAIKRYLSMAGTEFDIPMIVPSVVYGGDARNAYRNASYNRSGVAYYLLERHLGRETFLKAMHAYMTRWQSKHPMPFDFFFTFNHATGEDLNWFFKPWFFEFGYPDLAIEKVAEDQQTLTVKVIKKGNLPLPIKLTVVFQDSSQTMIEKAMDIWRSGKNETVIKISKEKPIIEIQLGDKHIPDLFDDNNWIRMKE
>NZ_CP018099.1|WP_044281726.1|4483843_4484281_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MRSKDDSSKTSGHKVFKTDADWQSCLTPEQFYVTRKKGTERPFSGKYYDYWEEGTYLCVACGAELFSSSTKYHSGSGWPSFWDVASEENVILEKDTSLGMVRTEILCASCGAHLGHVFDDGPPPTGLRYCINSAALKFVPKNLKK
>NZ_CP018099.1|WP_006928018.1|4501102_4501366_-|CRISPR-associated-endonuclease-Cas2
MYVILVYDVGEKRVGKMLKLCRQYLNWIQNSVFEGEITSVKLKELLKKAKRLMDMDNDSIIVFKSRDIKWLEKEIIGLEKNPLDTML
>NZ_CP018099.1|WP_006928017.1|4501386_4502391_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKNYYLFNPGRLSRKDNTLKFVPVDEEGQEQKPRFLPVEGVSDLYVFGSLDANSALYNFLGKKQIAVHFFDYYENYTGSFMPRDYLLAGKVQIAQTRAYLRKSRRLGLAQAFIEGASFNMLKNLQYYQSRQKDLSAEIDTIQSLRSQISGAQDVSALMGVEGNIRQVYYQAFDAILKDFSMPGRTKRPPQDEINALISFGNMMCYSGCLRAIHHTQLNPTISFLHEPGYRRYSLALDLAEIFKPILVDRVIFKLINKQMIKEKDFDRQLNRCLLKDSGKKSFIQAYEQRLGETIHHRVLKKKVSYGHLIKLECYKLIKDILGEQPYKPFKIWW
>NZ_CP018099.1|WP_006928016.1|4502433_4502943_-|CRISPR-associated-protein-Cas4
MIITGTHINYYHVCKRELWLFANGIQMEHTSELVGEGKLIHEYAYPQRSEKYSEIELDGIKIDYYDAKNKIVHEIKKSDKVEKAHSWQVKYYLFVLEKKGITGVKGILEYPTLRLREEIELQEDDRLYLQKIMQEIETICRQEAMPPRIGKKICRACSYYDFCWSGEEP
>NZ_CP018099.1|WP_006928015.1|4502958_4505676_-|CRISPR-associated-helicase/endonuclease-Cas3
MSSNYFKTLESIKADFSCLLERLTECEKYWAHLHSHKAPEKLVDHTRLVGDYAFKLIQSHHLEIVIERLIQALIQKEFVLEKKAVGSFIKSLFWQTILFHDYGKINENFQRERMQNPHFSKKCKNKIGSRHSALSAFILISVKIQELRENSILSQNEKDFITLLIVPFAGVILKHHASYYDHDLDIPPDWIEAMKSYLSLLHIRTDFKLVKNLMQSFQDEQRFLPIVDFLFKDISAFSLFGLIRLCYSLLTAADYYATTEYTIDLAVKDFGVFLVGEKEKLQNTFKTSKSYNKDFYKRQEYYLSLPLDKLQKRNPENLNTLRQKLMAETLNAVKQNKNEYVFYLEAPTGSGKTNLSLAIAMELLQAHQYVNKILYVFPFTTLITQTAQSIKETLQVTNAQMVQLHSRSGFHSKREEVKDGQYGQQYQNYIDNLFVNYPIILMTHIKFFDILKSTQKENIYLLHRLANSIVIIDELQSYSPAEWDKIRFFISNFAYFFNIRFILMSATLPKLDALFLPESNQVPLPHNFISLLKNPKQYFQNPNFKGRVQFDFSLIDKITSIEELADFVFDECEKYSFQNNGVVKGIIEFIFKKRAGEFYKLIKERFNSANYQIYLLSGTILEPRRKEIIAHIKKSIEKKSSAKILLITTQVVEAGVDIDMDIGFKDRSLIDSDEQLAGRVNRNARTIPAKVFLFKLDRAYAIYGKDLRYALTRDHISQEQYQKILQEKRFEILYQQVCDYINRENKNEFIRGLKSYLEHFKKLRFSKIDRELQLISEQNVTVFVPLKISTCYFSNNDLEFISTLSGVTINDSLEGELVWKTYINIIKNKDMGFVEKRVDIKKIYGIMSQFMFSIYVNSGLLTELKNFADLEIFNSYQILYLSRWEQVYSYTDGIKDENFKEAMFI
>NZ_CP018099.1|WP_006928014.1|4505656_4506448_-|type-I-B-CRISPR-associated-protein-Cas5
MEKLISIEFKAPMGFLKKPDINEGGGKQLYLTFNMLHKPALLGILGAVLGLEGYGNPGVFPEYLSKLERLLIGIEPLNAVKGNFTKTILQYNNTTGFASHEQGGNLVVAEQILLNPAFRCYLLLNTDNQLLSQLDAQLRQSQAEYIPYLGKNEFHLWWENYREYSFKPYTYDRDYRIQTIIRKGNQLFKEMKKEGGLGLPFLLGQSQNEPEFISFEELPVGFDKDLKQYQREMFAYTNYTFKKEFRLDGLFLVKEENIVIQLF
>NZ_CP018099.1|WP_006928013.1|4506450_4507398_-|type-I-CRISPR-associated-protein-Cas7
MNEFKNRVFGCAIVKAINANYNADFTHQPRTLPDGTVYATDKAFKYSVRNYINQHYPEETVFFFKRLNQDMNPLTQAEVYDNLFENFESVEKAEVLNNLLRCIDIRFFGATFAAKSKKRTINLSIHGPVQINHGVNRYPENEIYSEQIMSPFRNPESEGQDEREASTLGQQSKLKEGHYVHHFSVNPKNLDAMLKFAEKAGGLTVEDIGKLKEAMRLGVTYYDSAAKAGADNELLFWVQLKPESKKVLPVFTEFISVNRENGKVMIDFGALKNVLSKINDEIEKMEVYYLPENTIIKNLPDNVHRYNLLTGKEVN
>NZ_CP018099.1|WP_006928012.1|4507432_4509256_-|hypothetical-protein
MLREIVNFTKSLSPEIFFRNLKPSEGLHLVVWLSDNGDLEKCEYEVFKKKQEITTFLKTCLRREINSKCVSMNKALDSKKKIHSCSPFSLAFKLKTFTSGDAEKRFKDYLRIAKGYCITDEQNFIVENFINFCTKNLPELLQNILADIAKKSEEDKKYKITEAHYLRIYLGNVSLEEFKNVHMNYLRLKVFNKDEFNIKRNNKIYGVSDYLTGYNQKKPFLQHLTATFEVNNRVNEDDALWLYRFKQLKDNKQLPNPLPIFIDKQELNQEIVTIFLDQEGNISYSDIIRSVHEKYKDLGNYYLLNIQGKNIKDFDFVSSFKMYIEPKVRILPIFSYSSKLINRTIENVFDFEKEIVPCIFNNKLIQHTKNGIRYRYFEDIDYNPKYISTIEYQLVLKYRKAFYDYIYKSKREAINSRIFYEIMQSMILNDLKQDEFKDNRHTKDFAIKEKLNIWFSLYEFFDQPNRGEIVAMANLTVHLQERVKAIAEDENSHIENDNEFAFAAGQIIYYLFSQSETANKTHALLEPFLQKTDCEQFKMAISRTLDRYKHKIHFNHLKFNKIISEILGYYTDQNIKNLMPIILAGYFSDNVLYGKKEMKKMTEEIKS
>NZ_CP018099.1|WP_006928011.1|4509279_4510077_-|CRISPR-associated-endoribonuclease-Cas6
MRLKLKLQVDSQFNILPFNYFYPVSAWLYKQINRGDSDFAHWLHQKGYMVKGKHFKHFTFSKIGLRRFRRLNGGLLILDRQVDLHISFLTQKSFESFLSGLFLHQQMDIVDARHQCRFFITQVESLSAPEFKARMHFRSKSPICLSKPVEINGKSGKEFLHPSHPEYGQRLVQNLFFKYLSFKELEKDAAMEDSLMKNFEFKWYEPCKSRLATIKSGSKEETRIRGYLYSFDLTAPPELLRIGYYSGFGEKNSLGFGYVEVMNDK
>NZ_CP018099.1|WP_006928010.1|4510351_4510990_+|TetR/AcrR-family-transcriptional-regulator
MVETISQKEEQILQIAMQVFVEKGWHGARMQEIADRAGVNKAMLHYYFRSKDRLYAAVLEKLFLKFINSIGDSFIPGQTFAETLRIFLDRFHDHLLNNAHLPLFIARELSEGGSRARQVMEKIIAENRMHTPYAIINELKLAGERGEIMHIEQPVQFLLTLIGSCVYFFLAKPIIEPMFPEIDFNSSEFIEQRKQMIFEQLYYGIKKRETPS
>NZ_CP018099.1|WP_006928009.1|4510986_4512297_+|TolC-family-protein
MNPLKYLLMLSLILAAFCPASLQAQSLEQAIKIALDQNKELKAQKQALRKRQLEARAAFRQTLPSLDFGAWYRHVTHVAQIDFPALPTLPALPSAVRLGRYDTYETSLTIKHVLFSGFAQKNRVRLMSQMSELEHINLEEKEKEIAFRVIAAYRNAQEKQLEIEVIKASMERVAWQMKRIKSLIKQGMALGLDSLSLKLARLNYHKQLIAAQGALAIAEKQLKELTGQKITIQSFNEPPEVGLNVMPVVQLTGPYRLLDQQQQMQSTAVKISRARYFPALAAFASYNYGRPGLDMIKGEWMDYGIWGVSLSWNLFSWNADRLNEQAARARFKQLDWQKQAVKDQLQTRFDRALREWQTLKEQQDVVQAALKVARQKMKVVAARYAQGMASVTDFNEANLQLTEAQLNVKRHALLMTLKRSEIDYLSGKPLTQWSIP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP018099_5	5.1\|2756493\|48\|NZ_CP018099\|CRISPRCasFinder	2756493-2756540	48	NZ_CP018099.1	2414788-2414835	0	1.0
NZ_CP018099_7	7.1\|3698851\|54\|NZ_CP018099\|PILER-CR	3698851-3698904	54	NZ_CP018099.1	3699532-3699585	1	0.981
NZ_CP018099_5	5.1\|2756493\|48\|NZ_CP018099\|CRISPRCasFinder	2756493-2756540	48	NZ_CP018099.1	1712051-1712098	2	0.958
NZ_CP018099_5	5.1\|2756493\|48\|NZ_CP018099\|CRISPRCasFinder	2756493-2756540	48	NZ_CP018099.1	2889323-2889370	2	0.958
NZ_CP018099_5	5.1\|2756493\|48\|NZ_CP018099\|CRISPRCasFinder	2756493-2756540	48	NZ_CP018099.1	3446437-3446484	2	0.958
NZ_CP018099_5	5.1\|2756493\|48\|NZ_CP018099\|CRISPRCasFinder	2756493-2756540	48	NZ_CP018099.1	182779-182826	2	0.958
NZ_CP018099_5	5.1\|2756493\|48\|NZ_CP018099\|CRISPRCasFinder	2756493-2756540	48	NZ_CP018099.1	433069-433116	2	0.958
NZ_CP018099_5	5.1\|2756493\|48\|NZ_CP018099\|CRISPRCasFinder	2756493-2756540	48	NZ_CP018099.1	3132238-3132285	2	0.958

1. spacer 5.1|2756493|48|NZ_CP018099|CRISPRCasFinder matches to position: 2414788-2414835, mismatch: 0, identity: 1.0

ttaaagggggtgagggaaagaaaatatttataaaaatacattctcttt	CRISPR spacer
ttaaagggggtgagggaaagaaaatatttataaaaatacattctcttt	Protospacer
************************************************

2. spacer 7.1|3698851|54|NZ_CP018099|PILER-CR matches to position: 3699532-3699585, mismatch: 1, identity: 0.981

actccgccacctctccaattattttatctttatttctaattaattcaactttaa	CRISPR spacer
actccggcacctctccaattattttatctttatttctaattaattcaactttaa	Protospacer
****** ***********************************************

3. spacer 5.1|2756493|48|NZ_CP018099|CRISPRCasFinder matches to position: 1712051-1712098, mismatch: 2, identity: 0.958

ttaaagggggtgagggaaagaaaatatttataaaaatacattctcttt	CRISPR spacer
ttaaagggggtgagggaaagaaaaaatttataaaaatacattatcttt	Protospacer
************************ ***************** *****

4. spacer 5.1|2756493|48|NZ_CP018099|CRISPRCasFinder matches to position: 2889323-2889370, mismatch: 2, identity: 0.958

ttaaagggggtgagggaaagaaaatatttataaaaatacattctcttt	CRISPR spacer
ttaaagggggtgagggaaagaaaaaatttataaaaatacattatcttt	Protospacer
************************ ***************** *****

5. spacer 5.1|2756493|48|NZ_CP018099|CRISPRCasFinder matches to position: 3446437-3446484, mismatch: 2, identity: 0.958

ttaaagggggtgagggaaagaaaatatttataaaaatacattctcttt	CRISPR spacer
ttaaagggggtgagggaaagaaaaaatttataaaaatacattgtcttt	Protospacer
************************ ***************** *****

6. spacer 5.1|2756493|48|NZ_CP018099|CRISPRCasFinder matches to position: 182779-182826, mismatch: 2, identity: 0.958

ttaaagggggtgagggaaagaaaatatttataaaaatacattctcttt	CRISPR spacer
ttaaagggggtgagggaaagaaaaaatttataaaaatacattgtcttt	Protospacer
************************ ***************** *****

7. spacer 5.1|2756493|48|NZ_CP018099|CRISPRCasFinder matches to position: 433069-433116, mismatch: 2, identity: 0.958

ttaaagggggtgagggaaagaaaatatttataaaaatacattctcttt	CRISPR spacer
ttaaagggggtgagggaaagaaaaaatttataaaaatacattgtcttt	Protospacer
************************ ***************** *****

8. spacer 5.1|2756493|48|NZ_CP018099|CRISPRCasFinder matches to position: 3132238-3132285, mismatch: 2, identity: 0.958

ttaaagggggtgagggaaagaaaatatttataaaaatacattctcttt	CRISPR spacer
ttaaagggggtgagggaaagaaaaaatttataaaaatacattgtcttt	Protospacer
************************ ***************** *****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	178849-178884	5	0.861
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	335140-335175	5	0.861
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	441628-441663	5	0.861
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	698965-699000	5	0.861
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	30379-30414	5	0.861
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31094-31129	5	0.861
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29001-29036	5	0.861
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	162159-162194	5	0.861
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	MN694369	Marine virus AFVG_250M682, complete genome	37681-37715	5	0.857
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	517200-517235	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	557097-557132	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	699719-699754	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	339900-339935	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	515128-515163	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	106646-106681	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	307404-307439	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	516820-516855	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	32000-32035	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33620-33655	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024789	Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence	1047-1082	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	161779-161814	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	47254-47289	6	0.833
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	121341-121376	6	0.833
NZ_CP018099_8	8.14\|4499853\|34\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499853-4499886	34	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	454248-454281	6	0.824
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	340049-340084	7	0.806
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	515277-515312	7	0.806
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	556948-556983	7	0.806
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29868-29903	7	0.806
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	85852-85887	7	0.806
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP046705	Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence	241580-241615	7	0.806
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024790	Nostoc flagelliforme CCNUN1 plasmid pNFSY05, complete sequence	19944-19979	7	0.806
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_AP017564	Pseudanabaena sp. ABRG5-3 plasmid ABRG53d, complete sequence	27220-27255	7	0.806
NZ_CP018099_8	8.9\|4499528\|34\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499528-4499561	34	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	183107-183140	7	0.794
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	MG945430	UNVERIFIED: Microviridae sp. isolate 4506-1801, complete genome	2507-2541	7	0.8
NZ_CP018099_8	8.22\|4500388\|34\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500388-4500421	34	NC_010693	Erwinia tasmaniensis Et1/99 plasmid pET46, complete sequence	2969-3002	7	0.794
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP027185	Acinetobacter baumannii strain AR_0052 plasmid unnamed1, complete sequence	99200-99235	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	CP033551	Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-1, complete sequence	119737-119772	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	CP033546	Acinetobacter nosocomialis strain 2014N23-120 plasmid p2014N23-120-1, complete sequence	110464-110499	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP034093	Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence	35901-35936	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP038645	Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence	87841-87876	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	CP033517	Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence	4952-4987	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP016301	Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence	48055-48090	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP016296	Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence	48055-48090	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP016299	Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence	48055-48090	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP024125	Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence	86075-86110	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP026128	Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence	102678-102713	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP020585	Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence	95874-95909	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NC_023031	Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence	109784-109819	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP027182	Acinetobacter baumannii strain AR_0070 plasmid unnamed4, complete sequence	100562-100597	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_MK386680	Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence	23474-23509	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP018257	Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence	202-237	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP010780	Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence	56931-56966	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP028569	Acinetobacter pittii strain WCHAP005046 plasmid p1_005046, complete sequence	23516-23551	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP023025	Acinetobacter baumannii strain 10324 plasmid pAba10324c, complete sequence	107260-107295	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP041590	Acinetobacter baumannii strain J9 plasmid pJ9-3, complete sequence	945-980	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP039519	Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence	104359-104394	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP033864	Acinetobacter sp. FDAARGOS_560 plasmid unnamed2	16201-16236	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP046537	Acinetobacter baumannii strain XL380 plasmid unnamed, complete sequence	75494-75529	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP010398	Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence	110414-110449	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP015484	Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence	1509-1544	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP018333	Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence	62744-62779	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	CP031744	Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence	1509-1544	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP028139	Acinetobacter baumannii strain NCIMB 8209 plasmid pAbNCIMB8209_134, complete sequence	1511-1546	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP050905	Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence	7403-7438	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NC_020524	Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence	1509-1544	7	0.806
NZ_CP018099_8	8.30\|4500914\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500914-4500949	36	NZ_CP021327	Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence	63793-63828	7	0.806
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	200654-200689	8	0.778
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	116817-116852	8	0.778
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29480-29515	8	0.778
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29875-29910	8	0.778
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31841-31876	8	0.778
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	AP017993	Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence	78576-78611	8	0.778
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	NZ_CP014680	Kozakia baliensis strain DSM 14400 plasmid pKB14400_6	1621-1655	8	0.771
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	NZ_CP034863	Buchnera aphidicola (Muscaphis stroyani) strain Mst plasmid pTrp, complete sequence	2588-2622	8	0.771
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	200661-200696	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	517207-517242	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	557104-557139	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	699726-699761	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	116810-116845	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	178842-178877	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	329663-329698	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	335133-335168	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	339893-339928	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	441621-441656	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	515121-515156	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	698958-698993	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27314-27349	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27321-27356	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27328-27363	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	30386-30421	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31848-31883	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31855-31890	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31862-31897	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33599-33634	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33606-33641	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33613-33648	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27300-27335	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29882-29917	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31869-31904	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	32007-32042	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	28994-29029	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27335-27370	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29487-29522	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	30393-30428	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31101-31136	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33592-33627	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024789	Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence	1054-1089	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	162166-162201	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	161772-161807	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP026682	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence	164662-164697	9	0.75
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP011383	Calothrix sp. 336/3 plasmid unnamed1	33364-33399	9	0.75
NZ_CP018099_8	8.2\|4499062\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499062-4499097	36	NZ_CP040996	Klebsiella pneumoniae strain FDAARGOS_775 plasmid unnamed4	26272-26307	9	0.75
NZ_CP018099_8	8.2\|4499062\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499062-4499097	36	CP038509	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219b	26412-26447	9	0.75
NZ_CP018099_8	8.2\|4499062\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499062-4499097	36	NZ_CP026209	Escherichia coli strain ECONIH5 plasmid unnamed, complete sequence	27431-27466	9	0.75
NZ_CP018099_8	8.2\|4499062\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499062-4499097	36	NZ_CP030875	Raoultella sp. X13 plasmid unnamed, complete sequence	28767-28802	9	0.75
NZ_CP018099_8	8.2\|4499062\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499062-4499097	36	NZ_CP030069	Klebsiella pneumoniae strain IA565 plasmid pDA11912.4, complete sequence	27232-27267	9	0.75
NZ_CP018099_8	8.2\|4499062\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499062-4499097	36	NZ_CP011864	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 1, complete sequence	29808-29843	9	0.75
NZ_CP018099_8	8.2\|4499062\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499062-4499097	36	NZ_CP050070	Klebsiella aerogenes strain 035 plasmid p35_C, complete sequence	14516-14551	9	0.75
NZ_CP018099_8	8.2\|4499062\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499062-4499097	36	NZ_CP024432	Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence	15799-15834	9	0.75
NZ_CP018099_8	8.14\|4499853\|34\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499853-4499886	34	NC_011973	Bacillus cereus Q1 plasmid pBc239, complete sequence	12778-12811	9	0.735
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	MT773556	Myoviridae sp. isolate BML_4 genomic sequence	130533-130567	9	0.743
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	AP014291	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S25-C40, * SEQUENCING IN PROGRESS *	22282-22316	9	0.743
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	MN694311	Marine virus AFVG_250M573, complete genome	38994-39028	9	0.743
NZ_CP018099_6	6.31\|3375401\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	3375401-3375436	36	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	166499-166534	10	0.722
NZ_CP018099_6	6.31\|3375401\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	3375401-3375436	36	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	168315-168350	10	0.722
NZ_CP018099_6	6.31\|3375401\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	3375401-3375436	36	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	179031-179066	10	0.722
NZ_CP018099_6	6.31\|3375401\|36\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	3375401-3375436	36	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	211923-211958	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	106653-106688	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	307397-307432	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	516813-516848	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	70052-70087	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	329656-329691	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27307-27342	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29889-29924	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29896-29931	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	47261-47296	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	121348-121383	10	0.722
NZ_CP018099_8	8.1\|4498996\|36\|NZ_CP018099\|CRISPRCasFinder,CRT	4498996-4499031	36	NC_019772	Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequence	72124-72159	10	0.722
NZ_CP018099_8	8.9\|4499528\|34\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499528-4499561	34	NZ_MH785245	Staphylococcus aureus strain ch8 plasmid pCH8, complete sequence	236-269	10	0.706
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	KT997857	Uncultured Mediterranean phage uvDeep-CGR2-KM18-C269, complete genome	1459-1493	10	0.714
NZ_CP018099_8	8.17\|4500050\|35\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4500050-4500084	35	MN856009	Siphoviridae sp. isolate 466, complete genome	18297-18331	10	0.714
NZ_CP018099_8	8.14\|4499853\|34\|NZ_CP018099\|CRISPRCasFinder,CRT,PILER-CR	4499853-4499886	34	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	254862-254895	11	0.676

1. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 5, identity: 0.861

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattaagttttg	Protospacer
*************** ************.****  .

2. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 5, identity: 0.861

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattaagttttg	Protospacer
*************** ************.****  .

3. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 5, identity: 0.861

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattaagttttg	Protospacer
*************** ************.****  .

4. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 5, identity: 0.861

cgtaattcgtaattcttaattcgtaattgagttaaa-	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatt-atttatct	Protospacer
*************** ************ * ***

5. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 5, identity: 0.861

cgtaattcgtaattcttaattcgtaatt----gagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattatcggagt----	Protospacer
*************** ************    ****

6. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 5, identity: 0.861

cgtaattcgtaattcttaattcgtaatt--gagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatttggaattt--	Protospacer
*************** ************  **.**

7. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 5, identity: 0.861

cgtaattcgtaattcttaattcgtaatt--gagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatttggaattt--	Protospacer
*************** ************  **.**

8. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 5, identity: 0.861

cgtaattcgtaattcttaattcgtaattgagttaaa-	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatt-atttatct	Protospacer
*************** ************ * ***

9. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to MN694369 (Marine virus AFVG_250M682, complete genome) position: , mismatch: 5, identity: 0.857

tcaaccaaaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
ttaaccaaaacaaaggagaaaacaatggaacaaac	Protospacer
*.******** *********** ********* *.

10. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattaaatcatg	Protospacer
*************** ************.*.*.* .

11. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa--	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatt--attacccc	Protospacer
*************** ************  .***

12. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattaaatcatg	Protospacer
*************** ************.*.*.* .

13. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa--	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatt--attacccc	Protospacer
*************** ************  .***

14. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa--	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatt--attacccc	Protospacer
*************** ************  .***

15. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaa---ttgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaaattttgtttt---	Protospacer
*************** **********   ***  **

16. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaa---ttgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaaattttgtttt---	Protospacer
*************** **********   ***  **

17. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa-	CRISPR spacer
cgtaattcgtaattcgtaatttgtaatt-atttatct	Protospacer
*************** *****.****** * ***

18. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattacttgaat	Protospacer
*************** ************.  * **

19. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattg--agttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattattaattg--	Protospacer
*************** ************.  *.**.

20. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024789 (Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa--	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatt--attacccc	Protospacer
*************** ************  .***

21. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattaaatcatg	Protospacer
*************** ************.*.*.* .

22. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaa---ttgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaaattttgtttt---	Protospacer
*************** **********   ***  **

23. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 6, identity: 0.833

cgtaattcgtaattcttaattcgtaa---ttgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaaattttgtttt---	Protospacer
*************** **********   ***  **

24. spacer 8.14|4499853|34|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 6, identity: 0.824

cttgtcatac-aaaaatacatgagcaagaaaaaat	CRISPR spacer
-ttgttgaacaaaaaatatatgggcaagaaaaaat	Protospacer
 ****.. ** *******.***.************

25. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 7, identity: 0.806

cgtaattcgtaattcttaattcgtaattgagttaaa---	CRISPR spacer
actaattcgtaattcgtaattcgtaattaa---aaactt	Protospacer
  ************* ************.*   ***

26. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 7, identity: 0.806

cgtaattcgtaattcttaattcgtaattgagttaaa---	CRISPR spacer
actaattcgtaattcgtaattcgtaattaa---aaactt	Protospacer
  ************* ************.*   ***

27. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 7, identity: 0.806

cgtaattcgtaattcttaattcgtaattgagttaaa---	CRISPR spacer
actaattcgtaattcgtaattcgtaattaa---aaactt	Protospacer
  ************* ************.*   ***

28. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 7, identity: 0.806

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattgaagagtc	Protospacer
*************** **************.  .

29. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 7, identity: 0.806

cgtaattcgtaattcttaattcgtaattgagttaaa---	CRISPR spacer
actaattcgtaattcgtaattcgtaattaa---aaactt	Protospacer
  ************* ************.*   ***

30. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP046705 (Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence) position: , mismatch: 7, identity: 0.806

cgtaattcgtaattcttaattcgtaattgagttaaa---	CRISPR spacer
actaattcgtaattcgtaattcgtaatt---tttaatac	Protospacer
  ************* ************   ** **

31. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024790 (Nostoc flagelliforme CCNUN1 plasmid pNFSY05, complete sequence) position: , mismatch: 7, identity: 0.806

cgtaattcgtaattcttaattcgtaattgagttaaa---	CRISPR spacer
actaattcgtaattcgtaattcgtaattaa---aaactt	Protospacer
  ************* ************.*   ***

32. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_AP017564 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53d, complete sequence) position: , mismatch: 7, identity: 0.806

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
gataattcgtaattcgtaattcgtaattcgattgaa	Protospacer
 .************* ************ ..**.**

33. spacer 8.9|4499528|34|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 7, identity: 0.794

---tcgaggttaaatttgttttcttgctttaaaactt	CRISPR spacer
cgttcta---ttaattctttttcttgctttaaaactt	Protospacer
   ** *   * ****. *******************

34. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to MG945430 (UNVERIFIED: Microviridae sp. isolate 4506-1801, complete genome) position: , mismatch: 7, identity: 0.8

tcaaccaaaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
gctgtaaaagaaaaggagaaaacaatggaacacat	Protospacer
 * .. ***.************ ************

35. spacer 8.22|4500388|34|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NC_010693 (Erwinia tasmaniensis Et1/99 plasmid pET46, complete sequence) position: , mismatch: 7, identity: 0.794

tctgtgaacggtcttccttaagcgcttcgatctg	CRISPR spacer
gcagtgaacgctcttccttcagcgcttcaaccag	Protospacer
 * ******* ******** ********.*.* *

36. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027185 (Acinetobacter baumannii strain AR_0052 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

37. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to CP033551 (Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

38. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to CP033546 (Acinetobacter nosocomialis strain 2014N23-120 plasmid p2014N23-120-1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

39. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034093 (Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

40. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038645 (Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

41. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to CP033517 (Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

42. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016301 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

43. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016296 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

44. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016299 (Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

45. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024125 (Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

46. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

47. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020585 (Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

48. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NC_023031 (Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

49. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027182 (Acinetobacter baumannii strain AR_0070 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

50. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK386680 (Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

51. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018257 (Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

52. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010780 (Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

53. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028569 (Acinetobacter pittii strain WCHAP005046 plasmid p1_005046, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

54. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023025 (Acinetobacter baumannii strain 10324 plasmid pAba10324c, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

55. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041590 (Acinetobacter baumannii strain J9 plasmid pJ9-3, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

56. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039519 (Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

57. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033864 (Acinetobacter sp. FDAARGOS_560 plasmid unnamed2) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

58. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046537 (Acinetobacter baumannii strain XL380 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

59. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010398 (Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

60. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015484 (Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

61. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018333 (Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

62. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to CP031744 (Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

63. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028139 (Acinetobacter baumannii strain NCIMB 8209 plasmid pAbNCIMB8209_134, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

64. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050905 (Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

65. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NC_020524 (Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

66. spacer 8.30|4500914|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021327 (Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence) position: , mismatch: 7, identity: 0.806

aaaactatctgaagaaaatgatggatttgaattaaa	CRISPR spacer
aaagccagtagaagaaaaggatgaatttgaattaaa	Protospacer
***.*.* . ******** ****.************

67. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.778

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattaaccctct	Protospacer
*************** ************.* ..

68. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.778

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattttacccca	Protospacer
*************** ************  ...  *

69. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.778

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattatttgtct	Protospacer
*************** ************.  *

70. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.778

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaattg-------	Protospacer
       *************** *************

71. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.778

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattagaatctg	Protospacer
*************** ************... *  .

72. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to AP017993 (Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence) position: , mismatch: 8, identity: 0.778

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattccctattc	Protospacer
*************** ************   *

73. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014680 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_6) position: , mismatch: 8, identity: 0.771

tcaacca--aaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
--aatcgataaataaaggaaaaaaaaatggaacacga	Protospacer
  **.*.  *** ******.***************.

74. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034863 (Buchnera aphidicola (Muscaphis stroyani) strain Mst plasmid pTrp, complete sequence) position: , mismatch: 8, identity: 0.771

tcaaccaaaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
actatcaaaaaaaagaaaaaaaaaatggaaaaaaa	Protospacer
 * *.**********.*.************ * *

75. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
gataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

76. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
gataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

77. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

78. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

79. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
gataattcgtaattcgtaattcgtaattcgtaattt-------	Protospacer
       *************** ************

80. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

81. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtagttcgtaattcgtaattcgtaattatcctctg	Protospacer
****.********** ************.  .*  .

82. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

83. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

84. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

85. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

86. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

87. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

88. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

89. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

90. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

91. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

92. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

93. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

94. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

95. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

96. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

97. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaatatttcctat	Protospacer
*************** ***********    .. *

98. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
ggtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

99. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
tgtaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

100. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
ggtaattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

101. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
ggtaattcgtaattcgtaattcgtaattcgtaattt-------	Protospacer
       *************** ************

102. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
tctaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

103. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
tttaattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

104. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
attaattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

105. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
gataattcgtaattcgtaattcgtaattcgtaattt-------	Protospacer
       *************** ************

106. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
gataattcgtaattcgtaattcgtaattcgtaattc-------	Protospacer
       *************** ************

107. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024789 (Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

108. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

109. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 9, identity: 0.75

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
gataattcgtaattcgtaattcgtaattcgtaatta-------	Protospacer
       *************** ************.

110. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP026682 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence) position: , mismatch: 9, identity: 0.75

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
agtaattcgtaattcgtaattcgtaatgacgctctg	Protospacer
 ************** *********** . *.*  .

111. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP011383 (Calothrix sp. 336/3 plasmid unnamed1) position: , mismatch: 9, identity: 0.75

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
accaattcgtaattcgtaattcgtaattaagaaagt	Protospacer
  .************ ************.**  *.

112. spacer 8.2|4499062|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040996 (Klebsiella pneumoniae strain FDAARGOS_775 plasmid unnamed4) position: , mismatch: 9, identity: 0.75

caacgtcgataaactgattgaagaaagtaataaggc	CRISPR spacer
agatgcggataaacttattgaagaaagaaataagtt	Protospacer
 .*.*. ******** *********** ****** .

113. spacer 8.2|4499062|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to CP038509 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219b) position: , mismatch: 9, identity: 0.75

caacgtcgataaactgattgaagaaagtaataaggc	CRISPR spacer
agatgcggataaacttattgaagaaagaaataagtt	Protospacer
 .*.*. ******** *********** ****** .

114. spacer 8.2|4499062|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026209 (Escherichia coli strain ECONIH5 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.75

caacgtcgataaactgattgaagaaagtaataaggc	CRISPR spacer
agatgcggataaacttattgaagaaagaaataagtt	Protospacer
 .*.*. ******** *********** ****** .

115. spacer 8.2|4499062|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030875 (Raoultella sp. X13 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.75

caacgtcgataaactgattgaagaaagtaataaggc	CRISPR spacer
agatgcggataaacttattgaagaaagaaataagtt	Protospacer
 .*.*. ******** *********** ****** .

116. spacer 8.2|4499062|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030069 (Klebsiella pneumoniae strain IA565 plasmid pDA11912.4, complete sequence) position: , mismatch: 9, identity: 0.75

caacgtcgataaactgattgaagaaagtaataaggc	CRISPR spacer
agatgcggataaacttattgaagaaagaaataagtt	Protospacer
 .*.*. ******** *********** ****** .

117. spacer 8.2|4499062|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011864 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 1, complete sequence) position: , mismatch: 9, identity: 0.75

caacgtcgataaactgattgaagaaagtaataaggc	CRISPR spacer
agatgcggataaacttattgaagaaagaaataagtt	Protospacer
 .*.*. ******** *********** ****** .

118. spacer 8.2|4499062|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050070 (Klebsiella aerogenes strain 035 plasmid p35_C, complete sequence) position: , mismatch: 9, identity: 0.75

caacgtcgataaactgattgaagaaagtaataaggc	CRISPR spacer
agatgcggataaacttattgaagaaagaaataagtt	Protospacer
 .*.*. ******** *********** ****** .

119. spacer 8.2|4499062|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024432 (Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence) position: , mismatch: 9, identity: 0.75

caacgtcgataaactgattgaagaaagtaataaggc	CRISPR spacer
agatgcggataaacttattgaagaaagaaataagtt	Protospacer
 .*.*. ******** *********** ****** .

120. spacer 8.14|4499853|34|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NC_011973 (Bacillus cereus Q1 plasmid pBc239, complete sequence) position: , mismatch: 9, identity: 0.735

cttgtcatacaaaaatacatgagcaagaaaaaat	CRISPR spacer
aaatagatacaaaaataaatgagcaaaaaaaaag	Protospacer
      *********** ********.******

121. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to MT773556 (Myoviridae sp. isolate BML_4 genomic sequence) position: , mismatch: 9, identity: 0.743

tcaaccaaaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
aaaataccgaaaaaagagtaaaaaatggaacacat	Protospacer
  **.   .*****.*** ****************

122. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to AP014291 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S25-C40, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.743

tcaaccaaaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
tagtgcataaaaaaggagaaaaacatggaagaaaa	Protospacer
* .  ** *************** ****** * *

123. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to MN694311 (Marine virus AFVG_250M573, complete genome) position: , mismatch: 9, identity: 0.743

tcaaccaaaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
taagacaaaaaaaaggagtaaaaaatgaaaacaaa	Protospacer
* *. ************* ********.**   *

124. spacer 6.31|3375401|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 10, identity: 0.722

aaaaataatttacaaagaatttgaaaaggggggaaa	CRISPR spacer
taaaataatttataaagaattagaaaaaaatagtac	Protospacer
 ***********.******** *****... .* *

125. spacer 6.31|3375401|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 10, identity: 0.722

aaaaataatttacaaagaatttgaaaaggggggaaa	CRISPR spacer
tgaaatcatttacaaagaattagaaaagaatagtac	Protospacer
 .**** ************** ******.. .* *

126. spacer 6.31|3375401|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 10, identity: 0.722

aaaaataatttacaaagaatttgaaaaggggggaaa	CRISPR spacer
tgaaatcatttacaaagaattagaaaagaatagtac	Protospacer
 .**** ************** ******.. .* *

127. spacer 6.31|3375401|36|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 10, identity: 0.722

aaaaataatttacaaagaatttgaaaaggggggaaa	CRISPR spacer
tgaaatcatttacaaagaattagaaaagaatagtac	Protospacer
 .**** ************** ******.. .* *

128. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaaatt-------	Protospacer
       *************** ********** *

129. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaaatt-------	Protospacer
       *************** ********** *

130. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaatttgtaatta-------	Protospacer
       *************** *****.******.

131. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattgataattcgtaattcgtaattg-------	Protospacer
       ******* .****** *************

132. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
tttaattcgtagttcgtaattcgtaattcgtaatta-------	Protospacer
       ****.********** ************.

133. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattcgtaattcgtaattcgtaattcgtaatat-------	Protospacer
       *************** ***********

134. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
cgtaattggtaattcgtaattcgtaattcgtaattc-------	Protospacer
        ************** ************

135. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
gataattcgtaattggtaattcgtaattcgtaattc-------	Protospacer
       ******* ******* ************

136. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaaatt-------	Protospacer
       *************** ********** *

137. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 10, identity: 0.722

-------cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
aataattcgtaattcgtaattcgtaattcgtaaatt-------	Protospacer
       *************** ********** *

138. spacer 8.1|4498996|36|NZ_CP018099|CRISPRCasFinder,CRT matches to NC_019772 (Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequence) position: , mismatch: 10, identity: 0.722

cgtaattcgtaattcttaattcgtaattgagttaaa	CRISPR spacer
actaattcgtaattcataattcgtaattaaagaggg	Protospacer
  ************* ************.*.  ...

139. spacer 8.9|4499528|34|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH785245 (Staphylococcus aureus strain ch8 plasmid pCH8, complete sequence) position: , mismatch: 10, identity: 0.706

tcgaggttaaatttgttttcttgctttaaaactt	CRISPR spacer
aaaaggttaaatttgatttcttgattttggtttt	Protospacer
  .************ ******* *** .. .**

140. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to KT997857 (Uncultured Mediterranean phage uvDeep-CGR2-KM18-C269, complete genome) position: , mismatch: 10, identity: 0.714

tcaaccaaaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
gaaacgaaaaaaaaggagaaataaatgggcattgt	Protospacer
  *** *************** ******.   ..*

141. spacer 8.17|4500050|35|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to MN856009 (Siphoviridae sp. isolate 466, complete genome) position: , mismatch: 10, identity: 0.714

tcaaccaaaaaaaaggagaaaaaaatggaacacat	CRISPR spacer
tgatttttaataaaggagaataaaatggaacacta	Protospacer
* * ..  ** ********* ************

142. spacer 8.14|4499853|34|NZ_CP018099|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 11, identity: 0.676

cttgtcatacaaaaatacatgagcaagaaaaaat	CRISPR spacer
aagtagaaacaaaaataaatgaccaagaaaaacc	Protospacer
      * ********* **** ********* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

671975 : 754430

Bacillus_phage(28.57%)

tail,tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006928579.1\|671975_674666_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	4.8e-164	43.2
WP_006926562.1\|674947_676534_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_006927061.1\|676836_678498_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_044281142.1\|679085_681059_+	homoaconitase	NA	NA	NA	NA
WP_006928581.1\|681183_682275_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_006928582.1\|682365_683289_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_006928583.1\|683423_685019_+	acyl--CoA ligase	NA	NA	NA	NA
WP_006928584.1\|685230_686040_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_006928585.1\|686168_686450_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_006928586.1\|686749_688723_+	amidohydrolase family protein	NA	NA	NA	NA
WP_006928587.1\|688730_689258_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_006928588.1\|689310_690219_-	proline dehydrogenase family protein	NA	NA	NA	NA
WP_006928590.1\|690780_692949_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_006928591.1\|693360_695046_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_006928592.1\|695042_695834_+	DUF4292 domain-containing protein	NA	NA	NA	NA
WP_006928593.1\|695847_696771_+	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	4.8e-23	28.1
WP_006928594.1\|696782_697817_+	glycosyltransferase	NA	NA	NA	NA
WP_006928595.1\|697930_700327_+	hypothetical protein	NA	NA	NA	NA
WP_006928596.1\|700646_701576_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_006928597.1\|701585_702218_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_006928598.1\|702230_703031_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_083581042.1\|703301_704963_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_044281147.1\|705980_706718_+	hypothetical protein	NA	NA	NA	NA
WP_006928601.1\|706695_708075_-	MATE family efflux transporter	NA	NA	NA	NA
WP_006928602.1\|708327_711552_+	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	7.2e-66	29.2
WP_006928603.1\|712407_713487_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_006928604.1\|713560_714973_+	PhoH family protein	A0A141HS37	Bacillus_phage	2.1e-41	29.7
WP_006928605.1\|715103_718637_-	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_006928606.1\|718925_719270_-	winged helix-turn-helix transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.9e-09	40.9
WP_006928607.1\|719660_721829_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_006928608.1\|722352_723738_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_006928609.1\|723734_725204_-	HAMP domain-containing protein	Q8QKV7	Ectocarpus_siliculosus_virus	3.9e-11	24.0
WP_006928610.1\|725203_726142_-	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_006928611.1\|726443_727031_+	hypothetical protein	NA	NA	NA	NA
WP_006928612.1\|727094_727493_+	DUF498 domain-containing protein	NA	NA	NA	NA
WP_006928613.1\|727614_728097_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_006928614.1\|728110_729610_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_006928615.1\|729629_731126_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_006928616.1\|731135_731780_+	DUF47 family protein	NA	NA	NA	NA
WP_006928618.1\|731792_733274_+	inorganic phosphate transporter	NA	NA	NA	NA
WP_006928619.1\|733290_734574_+	phosphate-selective porin O and P	NA	NA	NA	NA
WP_006928620.1\|734586_735897_+\|tail	lamin tail domain-containing protein	NA	NA	NA	NA
WP_169833690.1\|735920_736664_+	SdiA-regulated domain-containing protein	NA	NA	NA	NA
WP_006928623.1\|736857_738663_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	3.8e-24	25.5
WP_006928627.1\|738681_739398_+	signal peptidase I	NA	NA	NA	NA
WP_006928628.1\|739394_740555_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_006928630.1\|740529_742365_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_006928631.1\|742364_743627_+	hypothetical protein	NA	NA	NA	NA
WP_006928632.1\|743703_744102_+	YjbQ family protein	NA	NA	NA	NA
WP_006928633.1\|744343_745951_+	hypothetical protein	NA	NA	NA	NA
WP_006928634.1\|745985_746852_+	DUF2520 domain-containing protein	NA	NA	NA	NA
WP_006928635.1\|746841_747663_+	histidinol-phosphatase HisJ	NA	NA	NA	NA
WP_006928636.1\|747674_748094_+	CoA-binding protein	NA	NA	NA	NA
WP_006928637.1\|748104_748971_+	TraB/GumN family protein	NA	NA	NA	NA
WP_006928638.1\|748983_749754_+	DUF72 domain-containing protein	NA	NA	NA	NA
WP_006928639.1\|749771_751004_+	DUF1343 domain-containing protein	NA	NA	NA	NA
WP_006927246.1\|751068_752655_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_006927246.1\|752843_754430_-\|transposase	IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

2681566 : 2756453

Bacillus_phage(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006930366.1\|2681566_2682592_-\|protease	trypsin-like serine protease	J7Q326	Aeropyrum_coil-shaped_virus	3.5e-22	32.5
WP_052304183.1\|2682915_2683563_+	hypothetical protein	NA	NA	NA	NA
WP_150109312.1\|2683798_2684260_+	hypothetical protein	NA	NA	NA	NA
WP_006930373.1\|2684340_2687091_-	insulinase family protein	NA	NA	NA	NA
WP_150109378.1\|2687160_2687856_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_006930375.1\|2687861_2688860_-	aldo/keto reductase	NA	NA	NA	NA
WP_006930376.1\|2688884_2689514_-	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_006930377.1\|2689545_2690268_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_006930378.1\|2690410_2691079_+	response regulator	W8CYM9	Bacillus_phage	4.1e-16	35.0
WP_006930379.1\|2691080_2691281_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_006930380.1\|2691298_2692300_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_006930381.1\|2692302_2693979_-	hypothetical protein	NA	NA	NA	NA
WP_006930382.1\|2694013_2695243_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_006930383.1\|2695267_2696725_-	peptidase M64	NA	NA	NA	NA
WP_006930384.1\|2696940_2697120_-	hypothetical protein	NA	NA	NA	NA
WP_006930386.1\|2697132_2698494_-	alkaline phosphatase	NA	NA	NA	NA
WP_006930388.1\|2698639_2699701_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_006930390.1\|2699681_2700395_-	DUF2459 domain-containing protein	NA	NA	NA	NA
WP_006930392.1\|2700897_2703420_-	CotH kinase family protein	A0A2D1GD28	Mycobacterium_phage	2.6e-55	30.7
WP_006930393.1\|2703558_2705466_-	Na+:solute symporter	NA	NA	NA	NA
WP_006930395.1\|2705791_2707624_-	glutamate formimidoyltransferase	NA	NA	NA	NA
WP_044281339.1\|2707828_2708392_-	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_006928599.1\|2708707_2710369_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_006930400.1\|2710426_2712448_-	DUF1573 domain-containing protein	NA	NA	NA	NA
WP_006930402.1\|2713058_2713814_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_006930403.1\|2714074_2717683_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA
WP_006930405.1\|2718375_2719452_-	class II fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_006930406.1\|2719959_2720985_-	arsenic efflux protein	NA	NA	NA	NA
WP_006930407.1\|2721011_2721662_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_006930408.1\|2721663_2722056_-	dinitrogenase iron-molybdenum cofactor biosynthesis protein	NA	NA	NA	NA
WP_006930409.1\|2722257_2722668_-	hypothetical protein	NA	NA	NA	NA
WP_006930411.1\|2722788_2723430_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_071961279.1\|2723760_2725521_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	4.3e-65	29.9
WP_006930413.1\|2725580_2727206_-	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_006930414.1\|2727384_2729280_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.8e-56	31.3
WP_006930415.1\|2729290_2730148_+	DUF3108 domain-containing protein	NA	NA	NA	NA
WP_006930417.1\|2730316_2730940_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	4.6e-62	53.4
WP_006930418.1\|2730972_2731530_-	PepSY-associated TM helix domain-containing protein	NA	NA	NA	NA
WP_006930419.1\|2731621_2732095_-	DUF4920 domain-containing protein	NA	NA	NA	NA
WP_006930420.1\|2732166_2732700_-	spore maturation protein	NA	NA	NA	NA
WP_150109379.1\|2732692_2733346_-	nucleoside recognition protein	NA	NA	NA	NA
WP_006930422.1\|2734548_2735523_+	AgmX/PglI C-terminal domain-containing protein	NA	NA	NA	NA
WP_006930425.1\|2735515_2736172_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_006930440.1\|2736174_2740203_-	S8 family serine peptidase	A0A2K9L199	Tupanvirus	1.3e-19	34.7
WP_081475109.1\|2740202_2741726_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_169833709.1\|2741719_2742226_-	LptE family protein	NA	NA	NA	NA
WP_006930447.1\|2742380_2743541_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_006930448.1\|2743850_2744687_-	metallophosphoesterase	NA	NA	NA	NA
WP_044281343.1\|2744896_2745325_-\|protease	hydrogenase maturation protease	NA	NA	NA	NA
WP_006930450.1\|2745356_2746040_-	Ni/Fe-hydrogenase, b-type cytochrome subunit	NA	NA	NA	NA
WP_150109313.1\|2746052_2747771_-	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA
WP_006930452.1\|2747770_2748883_-	hydrogenase small subunit	NA	NA	NA	NA
WP_006930453.1\|2749337_2749655_-	hypothetical protein	NA	NA	NA	NA
WP_006930454.1\|2749670_2751053_-	tetrathionate reductase family octaheme c-type cytochrome	NA	NA	NA	NA
WP_006930455.1\|2751481_2751811_-	Hpt domain-containing protein	NA	NA	NA	NA
WP_006930456.1\|2751944_2752373_-	OsmC family protein	NA	NA	NA	NA
WP_006930457.1\|2752393_2752549_-	hypothetical protein	NA	NA	NA	NA
WP_006926562.1\|2752806_2754393_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_071961280.1\|2754692_2756453_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	5.1e-66	30.1

DBSCAN-SWA_3

3304484 : 3314083

Salmonella_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_169833716.1\|3304484_3306656_-	RelA/SpoT family protein	J9Q7H7	Salmonella_phage	2.1e-08	33.6
WP_044281452.1\|3306689_3308069_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	3.2e-95	43.3
WP_006926512.1\|3308661_3309462_-	uracil-DNA glycosylase	L7TNG6	Rhizobium_phage	1.3e-05	25.5
WP_006926513.1\|3309458_3310520_-	DNA/pantothenate metabolism flavoprotein domain protein	Q9HH70	Methanothermobacter_phage	8.2e-27	35.6
WP_006926514.1\|3310521_3311082_-	guanylate kinase	A0A1C9KCK9	Volepox_virus	1.9e-19	33.0
WP_006926515.1\|3311091_3311967_-	YicC family protein	NA	NA	NA	NA
WP_006926516.1\|3312415_3314083_+	DUF814 domain-containing protein	M1I3C6	Paramecium_bursaria_Chlorella_virus	4.6e-08	42.0

DBSCAN-SWA_4

4826923 : 4862518

Staphylococcus_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071961310.1\|4826923_4828684_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.4e-63	29.4
WP_169313624.1\|4830471_4831119_+	succinate dehydrogenase cytochrome b subunit	NA	NA	NA	NA
WP_006927722.1\|4831115_4833026_+	fumarate reductase/succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA
WP_006927721.1\|4833037_4833793_+	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA
WP_006927720.1\|4833875_4835321_-	outer membrane protein transport protein	NA	NA	NA	NA
WP_006927719.1\|4835349_4836369_-	hypothetical protein	NA	NA	NA	NA
WP_044281037.1\|4836658_4836934_-	hypothetical protein	NA	NA	NA	NA
WP_006927718.1\|4837059_4837515_-	hypothetical protein	NA	NA	NA	NA
WP_006927717.1\|4837537_4838500_-	C40 family peptidase	A0A0A8WIF2	Clostridium_phage	7.2e-06	31.4
WP_006927716.1\|4838627_4838969_-	hypothetical protein	NA	NA	NA	NA
WP_006927715.1\|4838987_4840019_-	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_006927714.1\|4840127_4840493_-	hypothetical protein	NA	NA	NA	NA
WP_044281015.1\|4840650_4840923_+	hypothetical protein	NA	NA	NA	NA
WP_006926562.1\|4841379_4842966_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_081475146.1\|4843538_4844393_+	hypothetical protein	NA	NA	NA	NA
WP_006927712.1\|4844414_4844627_+	hypothetical protein	NA	NA	NA	NA
WP_006927711.1\|4844929_4845157_+	hypothetical protein	NA	NA	NA	NA
WP_169313623.1\|4845340_4846204_+	hypothetical protein	NA	NA	NA	NA
WP_006927708.1\|4846205_4847009_+	hypothetical protein	NA	NA	NA	NA
WP_169833740.1\|4847114_4847288_+	hypothetical protein	NA	NA	NA	NA
WP_006927707.1\|4847289_4847820_+	hypothetical protein	NA	NA	NA	NA
WP_081475145.1\|4848675_4849542_+	hypothetical protein	NA	NA	NA	NA
WP_169833741.1\|4849716_4849974_+	hypothetical protein	NA	NA	NA	NA
WP_006927061.1\|4850252_4851914_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_006926562.1\|4852285_4853872_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_006927704.1\|4854126_4854450_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_006927703.1\|4854619_4855144_-	cytochrome P460 family protein	NA	NA	NA	NA
WP_006927702.1\|4855170_4856010_-	hypothetical protein	NA	NA	NA	NA
WP_006927701.1\|4856012_4856585_-	YceI family protein	NA	NA	NA	NA
WP_052304144.1\|4856688_4857099_-	hypothetical protein	NA	NA	NA	NA
WP_006927699.1\|4857208_4859494_+	fused MFS/spermidine synthase	NA	NA	NA	NA
WP_006926703.1\|4859590_4861387_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_006927698.1\|4862074_4862518_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018099

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection