CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP017480	Luteibacter rhizovicinus DSM 16549 strain LJ96 chromosome, complete genome	2 crisprs	DinG,cas3,WYL,csa3,DEDDh	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP017480_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017480_1

1731656-1731782

Unclear

Consensus_repeat	Method
CAGGTGGAGGGCGAACCTCGCTTATATGTCACCCGCAG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP017480_1

>merge|NZ_CP017480|1|1731656-1731782|CRISPRCasFinder
CAGGTGGAGGGCGAACCTCGCTTATATGTCACCCGCAGGGCAGCCTTTCTTGTGTCTCAGGTTCGAAAACGCGAACCGTCGTCACTTCACAGGTGGAGGGCGAACCTCGCTTATATGTCACCTGCAG

>NZ_CP017480|1|1|1731656-1731782|CRISPRCasFinder
CAGGTGGAGGGCGAACCTCGCTTATATGTCACCCGCAG	GGCAGCCTTTCTTGTGTCTCAGGTTCGAAAACGCGAACCGTCGTCACTTCA
CAGGTGGAGGGCGAACCTCGCTTATATGTCACCTGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017480.1\|WP_046969560.1\|1730114_1730957_+\|DMT-family-transporter	unknown	unknown	unknown
NZ_CP017480.1\|WP_046968412.1\|1732973_1734263_-\|sugar-MFS-transporter	unknown	unknown	gnl\|CDD\|340952
NZ_CP017480.1\|WP_046969564.1\|1723125_1724160_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225132
NZ_CP017480.1\|WP_046968411.1\|1734659_1735685_+\|glucokinase	unknown	unknown	gnl\|CDD\|237092
NZ_CP017480.1\|WP_046980368.1\|1731880_1732909_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380487
NZ_CP017480.1\|WP_071924905.1\|1719657_1721541_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273802
NZ_CP017480.1\|WP_046969561.1\|1727447_1729259_+\|phosphogluconate-dehydratase	unknown	unknown	gnl\|CDD\|181628
NZ_CP017480.1\|WP_046969563.1\|1724175_1724928_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP017480.1\|WP_052767266.1\|1747783_1748560_+\|transporter	unknown	unknown	gnl\|CDD\|379259
NZ_CP017480.1\|WP_046969562.1\|1726638_1727340_+\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|238694
NZ_CP017480.1\|WP_046968408.1\|1741086_1745376_-\|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224122
NZ_CP017480.1\|WP_052767389.1\|1730968_1731631_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350289
NZ_CP017480.1\|WP_181016749.1\|1729278_1729923_+\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	unknown	unknown	gnl\|CDD\|235577
NZ_CP017480.1\|WP_046968410.1\|1735803_1738536_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
NZ_CP017480.1\|WP_125903182.1\|1745619_1747740_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|185053
NZ_CP017480.1\|WP_169749265.1\|1748668_1748830_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017480.1\|WP_046969565.1\|1721961_1723107_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|224733
NZ_CP017480.1\|WP_125903010.1\|1725028_1726639_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_CP017480.1\|WP_046968405.1\|1749177_1749357_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017480.1\|WP_046968409.1\|1738683_1740960_+\|family-20-glycosylhydrolase	unknown	unknown	gnl\|CDD\|119333

Protein	Function_ID	Function_description	E-value
NZ_CP017480.1\|WP_046968412.1\|1732973_1734263_-\|sugar-MFS-transporter	gnl\|CDD\|340952	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of L-fucose permease (also called L-fucose-proton symporter) and similar proteins such as glucose/galactose transporter and N-acetyl glucosamine transporter NagP. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. Glucose/galactose transporter functions in the uptake of of glucose and galactose. The FucP-like subfamily belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.72996e-121
NZ_CP017480.1\|WP_046969564.1\|1723125_1724160_-\|SIS-domain-containing-protein	gnl\|CDD\|225132	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane].	1.90581e-105
NZ_CP017480.1\|WP_046968411.1\|1734659_1735685_+\|glucokinase	gnl\|CDD\|237092	PRK12408, PRK12408, glucokinase; Provisional.	5.41564e-121
NZ_CP017480.1\|WP_046980368.1\|1731880_1732909_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380487	cd01545, PBP1_SalR, ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators. The SalR binds to glucose based compound Salicin which is chemically related to aspirin. The ligand-binding of SalR is structurally homologous to the periplasmic sugar-binding domain of ABC-transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	4.51317e-121
NZ_CP017480.1\|WP_071924905.1\|1719657_1721541_-\|TonB-dependent-receptor	gnl\|CDD\|273802	TIGR01779, Vitamin_B12_transporter_BtuB, TonB-dependent vitamin B12 receptor. This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins].	2.50838e-170
NZ_CP017480.1\|WP_046969561.1\|1727447_1729259_+\|phosphogluconate-dehydratase	gnl\|CDD\|181628	PRK09054, PRK09054, phosphogluconate dehydratase; Validated.	0
NZ_CP017480.1\|WP_046969563.1\|1724175_1724928_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	8.32381e-72
NZ_CP017480.1\|WP_052767266.1\|1747783_1748560_+\|transporter	gnl\|CDD\|379259	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation.	6.30657e-08
NZ_CP017480.1\|WP_046969562.1\|1726638_1727340_+\|6-phosphogluconolactonase	gnl\|CDD\|238694	cd01400, 6PGL, 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate. 6PGL is thought to guard against the accumulation of the delta form of the lactone, which may be toxic through its reaction with endogenous cellular nucleophiles.	7.35092e-66
NZ_CP017480.1\|WP_046968408.1\|1741086_1745376_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|224122	COG1201, Lhr, Lhr-like helicases [General function prediction only].	0
NZ_CP017480.1\|WP_052767389.1\|1730968_1731631_-\|NYN-domain-containing-protein	gnl\|CDD\|350289	cd18722, PIN_NicB-like, LabA-like PIN domain of Pseudomonas putida S16 NicB and related proteins. Curiously NicB from Pseudomonas putida S16 is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine. This subfamily also includes the uncharacterized CPP15 (plasmid) protein from Campylobacter jejuni. This subfamily belongs to LabA-like PIN domain family which includes Synechococcus elongatus PCC 7942 LabA, human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	9.53618e-21
NZ_CP017480.1\|WP_181016749.1\|1729278_1729923_+\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	gnl\|CDD\|235577	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional.	1.77411e-84
NZ_CP017480.1\|WP_046968410.1\|1735803_1738536_+\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	2.07416e-171
NZ_CP017480.1\|WP_125903182.1\|1745619_1747740_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	3.7567e-77
NZ_CP017480.1\|WP_046969565.1\|1721961_1723107_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|224733	COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism].	9.97247e-157
NZ_CP017480.1\|WP_125903010.1\|1725028_1726639_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_CP017480.1\|WP_046968409.1\|1738683_1740960_+\|family-20-glycosylhydrolase	gnl\|CDD\|119333	cd06563, GH20_chitobiase-like, The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	0

>NZ_CP017480.1|WP_052767389.1|1730968_1731631_-|NYN-domain-containing-protein
MLTYSIMLDGAFVRRKAGSAAKPATSQDVVRLSTAIQRHPLLTSHRLHRIYFYDAAPSTEIIENPFSKERLDFGATRAHRASEVMHSQLAREAFFANRLGELSFQGWAPKMDLRKVTEESLTLGSADIRPVVGQKGVDMRIGLDMASLSLKKLSSIIVLVTGDSDFVPAMKFARREGTQVLLVTLGHGVKEQMLHHADIVLPTSVADWFIQCDNAICESL
>NZ_CP017480.1|WP_046969560.1|1730114_1730957_+|DMT-family-transporter
MIYILLAVAFSVTVSVLLKLARRANIDIVQAVATNYIMAAGLAMWLLGATPQAALEADARVPLILLGILLPAIFVMLARSVSSAGIVRTDVAQRLSLFLSLAAAFLLFGEALVPLKILGIVLALVAVACILWRKERVERAGWLAPLAVFAGFGAIDICFKLIAQAHAPFPSALLASFLIALVLCWIAVIVRAVTRQASLSPRSIGFGVVLGAANFANILFYIRGHQALPNDPSLVFASMNLGVVLLGALTGALAFREKLSWLNWAGLAVAVAAIGVMTIA
>NZ_CP017480.1|WP_181016749.1|1729278_1729923_+|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase
MSNEAKQQLVESTLRLAPVVPVVIIEDASKAVGMARALVAGGIPSIEVTLRTPSALDAVRAIAAEVEGAFVGVGTVLTARDLEAAYKAGAKFAVSPGSSPRLLDAAADHELPLLPGAATSSEAMNLLERGYRFQKFFPAVPAGGSKLIGAWASPLPQITFCPTGGISLANAAEFLALPNVVCVGGSWLTPANLLAAGDFAAIEKLAREASQLGR
>NZ_CP017480.1|WP_046969561.1|1727447_1729259_+|phosphogluconate-dehydratase
MNIHPILAEVTQRIVERSHASRAAYLAKIEGARGKGAKRHHLSCGNLAHGFAACGENDKDALRNGHAANIAIVTSYNDMLSAHQPYESYPERIRATARTFGATAQVAGGVPAMCDGVTQGRPGMELSLFSRDLIAMATAVSLSHDMYEGALYLGICDKIVPGMLIGALSFGHLASAFVPSGPMPSGIPNEEKSKVRQAFAAGKASRAELLDAEARSYHGSGTCTFYGTANSNQMLMEIMGLHIPGASFEAPDTPLREALTAAAVERVLATDCLGDHYLPIGRIVDERAIVNGVVGLHATGGSTNHLLHLVAMARAAGIELRWDDFDALSAVVPLLARVYPNGYADVNHFHEAGGMAFLMDQLLDAGLLHGDVNTIMGHGLEAYRHVPRLDGDKLAWERVSKESGNRGVLRSITEPFRQDGGLRMLSGNVGRGVIKVSSVPDDRMIIEAPAIVFDEQDDVKIAFDRGELNRDFIAVVRFQGPRARGMPELHKLTPTLSLLQDRGHRVALLTDGRMSGASGRVPAAIHVTPEAEAGGPIARIRTGDLVRLDAVAGTIEVLVDADEWNRRIPHTVDLAMHHTGMGRELFAMFRQSAVTADLGAGVF
>NZ_CP017480.1|WP_046969562.1|1726638_1727340_+|6-phosphogluconolactonase
MNAKVNRHEFADRLTLGDTLAKDIAGKLDAAVKARGKASLAVSGGGTPKLMFAVLAEQEIDWSKVSITLVDERWVDESSDRSNAALVKHHLIAHEAHVATFLPLFDKAHADDVDAALADVGKRVDALGKPFDVVVLGMGPDGHTASFFPGGDHLAQALDLDGKQSVLSMRADGAGEPRITLSLPRVLDTRALYLHIEGNDKKAILDKVIGGEDLPIAAVLKQDRTAVDVYWSP
>NZ_CP017480.1|WP_125903010.1|1725028_1726639_+|glucose-6-phosphate-dehydrogenase
METFPLSNRAVKGGETPRRLVRGWYDLVCHWYDPVASSLDVEQATVVSAQLLPIEPFDLVIFGGTGDLAVRKLLPAMYHRFVDGQIQPSSRIIGVAREGLDDAGYREQVRAAIEKGVAHVAKAQLEAFIAMIGYRSLDARKADGWDEFSALMAAQPTHIRVFYLSTSPDIFTDICQRLGSLGLNGERSRVVLEKPIGRDLQSANAINDAVAGYFTESQTYRIDHYLGKETVQNLLALRFGNALFEPLWNAQHIDHVQITVAETVGVGHRAGYYDRAGALRDMVQNHILQLLCMLAMEPPSSLAPDAVRDEKLKVLRSLRPIDASNAGQLTVRGQYRAGAAEGQSVPGYLDELGSDQSKTETFVALKAEIGNWRWAGVPFYLRTGKRLPNRVSEIVVTFRALPHSIFDPANGPLLPNRLTLRLQPDEGVKLWLTIKHPGPGGLRLRHVPLDMSFAAAFGIQQPDAYERLILDVVRGNPTLFMRRDEVEAAWNWAGPILQAWEGSGDTPKPYTAGTWGPSAAVALIERDGRTWAEDAA
>NZ_CP017480.1|WP_046969563.1|1724175_1724928_-|GntR-family-transcriptional-regulator
MEIALVAEYQRLQHDPAARLPLAYMRLRRAIRNVIENGEVQVGHALPSERDLARALTLSRVTVRKAIGGLVEDGLLTQRHGAGTFVSERIVKPLSRMTSFTEDLRARGLNPRSEFFERAIGEVTPEESMAMNLSPGTQVVRLHRLRYAGDEPLAIERSAVPLSLLPDPNLVEDSLYEALDKLGNRPLRALQRLRAVVLGPAQTRLLRLSAGSAGLSIERRSFLDDGRIVEFTCSWYRGDIYDFVAELQSD
>NZ_CP017480.1|WP_046969564.1|1723125_1724160_-|SIS-domain-containing-protein
MTIQPQDTLMFREAHETAEVVERQLANNEAVIGALAERLRATPPRMVITCARGSSDHAAMYAKYVFETQLGVVTASASPSVTSIYHAAQRLDGALYVAISQSGKSPDLVRNAEAAKKAGAYVVALVNVVDSPLAAVADVVVPLHAGPETSVAATKSYLGALFAILHIAARWSGKAEIADALTALPAQLRHGWDADWSALTDGLVDAHNLFVVGRGFGFAGALEAALKFKETCGLHAEAFSAAEVKHGPMALVGPHFPVLFFAQNDDTLPGVLDVAAEFRKRGAKVWVAAPGATGEDILPLVATAPIAAVLVTVQSFYRATAALALRRGFNPDVPPHLNKVTETV
>NZ_CP017480.1|WP_046969565.1|1721961_1723107_-|N-acetylglucosamine-6-phosphate-deacetylase
MTIALVNGRVLTDNGFQGGFAVLIDDGKITGLALPSDPRVRAAERHDLGGRSLLPGFIDCQVNGGGGVLFNDAPTVEAIRTIGEAHAKFGTTGFLPTLISDDVEVMAKAIDAVNEAVAQGVPGVLGIHLEGPFIAPERKGVHDPAKFRIADASDVAMVARRHGGVTLLTLAPERASAAVLQELVANGVIVAAGHTAADYDTTRNALATGIRGFTHLFNAMTPFTSREPGVVGAALEDPASWCGLIVDGHHVHPASLRVAIAAKAREKMMLVTDAMPPVGSDDPTFVLKGETITVKDGVCQTADGTLAGSALDMATAVRNTINMVGVPYDEAARMASTYPAAFLGLGATHGHIAAGYRADLVVMDDNHEVVETWIGGVRVVG
>NZ_CP017480.1|WP_071924905.1|1719657_1721541_-|TonB-dependent-receptor
MKKTLLAMALLSSIAAAHAADAPADRLDPVVVTANRAATPLDEVLAPVTLITREDIERLQPVSVQDLLTGLPGVVIANSGGIGQQTSLFMRGTNSSHTLVLLDGVRVGTVGAGIPAYEQLPVDQIDHIEIVRGPQSSLYGSDAIGGVIQIFTRHGQAGEAPTPSLSVTGGSHGYTDGQFGLSGGTQHSWYNASLGGQYTSGINACRVGAGDVFKGCFTNEPDHDAYRTYNGALSGGYRWDDGTELTGSWLRSKGDIEYDGDFQNLTRRTQQVAGAKLAFNALENWRMSISLGQNQDRADNYLNGADKTLDFVNYGVDKARVGYLYSKRNQASWQNDVTLAPGQTLSVGVDYQQEKLKSDTDYLKDTRENTGVFALYQGVFGANEIQLSARHDHNNQFGNHTTGQAAYGFRFDNGMKVTASYGTAFHAPTFNDEYYPYGAPVNLSPEKSRTAEIGLSARPGIWNWAVNAYQTRVSDLIGFDANFLPINVSKARIRGLEGQLGADVDGWHLRAYGTLQQPKDRDSGDEYNNLLARRPKRTARLDVDRDLGAFTVGGSVYSAGYSYDDAANTTRLGGYTTADVRATWHVDSDWSVQGRLANAFDRHYETAAYYNQLGRTYYLTVRYSPAR
>NZ_CP017480.1|WP_046980368.1|1731880_1732909_-|LacI-family-DNA-binding-transcriptional-regulator
MRSPTIKDVAERAGVSLKTVSRVINHEPSVHARTRDKVQRAIDALDYQPDQAARSLRGARTYALGLVYDNPNAHYVIAMQNGVLSVCRERGFGLQIHPCDSSAPKLAEQLCDLVRRNRLAGLVLAPPMSEQPRLLATLTEHKIPFVRIISARQDPKDGWPCVFVDDRDAAYAITEHLIQLGHHRIGFLWGGKEHRSSPERYQGYEDALREYGLPVDKKLVVEGDYSFDDGFRGARKLLALKEPPTAIFGSNDEIAAGVLAAARSGGVDVPWELSIAGFEDSPFSKQSWPALTTARQNTEEIGRHAAQRLIAELEREGDEHIIENEGFSPDLVVRGSTAPRRL
>NZ_CP017480.1|WP_046968412.1|1732973_1734263_-|sugar-MFS-transporter
MSSTAVGVDETRHSSLVPMIIIGVLFFIFGFVTWLNGPLITFVKLAFNLDDVNAFLVPMAFYLSYFFLALPSSFILKKTGMKKGMGLGLFVMAIGAVLFGQFVTMRVYPGALTGLFVIGAGLSLLQTASNPYISILGPIDSAAQRIAFMGICNKIAGALAPFVFGAVVMSNIGTFDKQIAAAGSPGEKDALLAAFAAKVHMPYMVMAGLLVVLAIWVVRSSLPEIKPSGANSERAIGHAKGSIFSFPHLWLGVLCLFVYVGVEVMAGDAIGTYGQGFGMTPEDTKHFTSYTLFAMLLGYIAGLLLIPKFVSQQKYLAFSAVLGVIFSIGTYLTTGYAAVGFVAALGFANAMMWPAIFPLAIKGLGALTEFGSAFLIMGIAGGAIIPVLFAHLKQSHDFQAVFLCLMVPCYLYILYYGAAGHRVGQHTKD
>NZ_CP017480.1|WP_046968411.1|1734659_1735685_+|glucokinase
MGESAKQREIVLASRSGAFIAADVGGTHARIGLVRRAAGSTAIDVLRYERYACADWPSLTAVLQDFVSRLDGQHHIEHCAVASAGYVLGDAIVNENLPWPVSIGDIRESLGLLGLAVVNDFEAVAYACQFLENHQTTPIIETAATPAVGPILVMGPGTGLGSAVLLPGSPHATVLPTEAGQISLAPGNEREVAILGELSRGRDYVSYETALSGPGLVHLYEAISTLRGTPATLTEPAAVTRAALDGIDPAAVEALDVFCGLLGSFVGDLALLYGARGGVFLAGGILPQVRDRLLASSFATRFFNKGVMRAFLQQVPVRLMDHGQLGVIGAAGLYLHGSNAH
>NZ_CP017480.1|WP_046968410.1|1735803_1738536_+|TonB-dependent-receptor
MSHRRNLLTASIIAGLCCVTSIAAAQDATPPPAKPQTAQQKAEAAKAQQLEGITVTGIRASLEKSLDTKRNADAIVEAVTAEDIGKFPNTNVAEAMTQIPGVTIDRQFGQGDRVSIDGTDPSLNLTFLNGQPISQTPWQYGAQPNRGFDFTMLAPEIIGRLEIYKSPEARLTEGSLGGTVLLHTLEPLDLPANTVRGSFGLNYNDQGSGGSRPTASALYSWKNTSNTFGIIGSLQHYEEKIDRQGLEIFSYSPVSKWAASPAVAAGIANGSLNPNAQVPDEVNSAWFQQNRKRDTATLGFQLKPADNWNIDVNSLFIRENFDNWNQSMYPFTGNAPGNVTSFTQGPNGVVTGGHVCGNDNPGCPAIGPTLMDSNVRKSVVRTSAFDVKSTYDGDGWKLGGAAGYSKARNDNISQAVIEPQYAGGYTWDINHGFNFDSPAAAKNPANWHMGDADGLGGWPGNYGDYSANSRDSYAQLDFSKYFDNFFNELQVGYRWNRHEEGMNAHVYGGNGATSLADLGTNGLTNILGSVGGYDGAAEHVSADPDKQYAWVRATNGGNEDAGTFLNGTYKLIEKTNAAYAQLNFAGGGFHGNLGVRYVDTKTDGFGYNYSGAPVLPAPAGSYQKASQTSKNWLPSINVAYDLTDDIILRAAAAKVIARAPYNMQVNNLFLNDTVLTGSGGTPDLKPYKSNNYSLSGEWYFAPQSYFAITGFYKKIDDYIFQDVVEEQHFNSATSTDPVQFAKELAAGLCTADGFCTYDISRPVNVGSGKVRGGNVSFQQAFWDTGFGVTANYTYAKGTLDSGGQLPYNSKNAYSISPYYEFGPFSARINYNWRSAYLAGGYVAGAPPATTEAYADLGATIGWKFNKQISVTLSGMNLANEQYKQYIGTKDLPVAKYTTGRRYMASVHFDL
>NZ_CP017480.1|WP_046968409.1|1738683_1740960_+|family-20-glycosylhydrolase
MRRTLFLAMALGLTACASQPRHDASPVDSTPLSLIPQPASLQRLPGHFRLDPLTSIVVAPGNAAAKKVATQLQGWIRQARGMDIAIVEGKPHSGAIVLLTDTTTKGREAYTLDVNDNGVRIAANDETGLFYGAVTYWQLLTDPASQNGVPAVHIVDAPRFAWRGLMLDSARHFQSVTEIEHLLDQMAMHKLNTFHWHLTDDQGWRLQVLKYPKLTEVGACRKPVGPDVALTGDPERPYCGFYTQDEAKQIVAYAAERHITVVPEIEMPGHAQAAVAAYPQFGAGSKKLGVSTDWGVNTALFNVDDGTFTFLQNVLDEVMAIFPSTYIHVGGDEAAKDEWEHSKVVQARMKSLGIDDEEKMQGWFVERIGAYLDQHGRRIVGWDEILDGKVPASATVMSWRGTKGAIKAANAGHDVVMAPSPTLYLDRLQSTLPDEQPGSPQVQTLKMVYDFDPVPADIAADKASHVLGAQVTVFAEYLPNWYRTQHAVFPRIAALAERTWSPTADWNGFVARLPAEMSRYRAAGIVPADGAYAVAINAVASDSDKAKVTLSSQTGYGTIRYTTDGTSPSAQSTAYTSPFDVPLPTTVRANSFDNGFALAGPRENAIDAKSLLRRSSDQLDTCGDKLVLRIESPDAVNGVRPVYKVDIMNTCWVWKGVKLDGRYGVDVTVDRLPYNYALWKDAAGIVSRKARSRAGEIEIHQDSCDGPKISTIALDKAKDGRATLQGILPKREGVHDLCFVITGKPGPKIWVLGDVQLR
>NZ_CP017480.1|WP_046968408.1|1741086_1745376_-|DEAD/DEAH-box-helicase
MPLAAFHPAVAAWFGNTFPEPTPAQVAAWPAIRSGRHTLVAAPTGSGKTLTAFLSAIDMLVREGVRDGGLPDRATVLYVSPLKALSNDIRINLEAPLAGIRDELRKQGLPDLEIRTAVRTGDTPSSERERMKKRPPHILVTTPESLYVLLGSASGRAMLGNVREVIVDEIHAVAASKRGSHLALSLERLASLAQRRITRIGLSATQKPIEKVAAFLTGNTNEDCAIVDIGHTRKRDLALEVPPVPLEAVMSNDMWELVYNRLANLIEQHTTTLIFVNTRRMAERVARHLSERLGREAVTAHHGSLSREQRLDAEQRLKKGELRALVATASLELGIDIGDIDLVCQIASPRSIAAFLQRAGRAGHAVGGTPKARLFPTSRDDLVECTALLDCVRRGELDTLVIPQQPLDVLAQQIVAEVACQEWDEDALYDLVRRAYPFSALKRETFDETVRMLAEGFTTRVGPRGAYIHRDAVNKRLRERRGAKLTAVTSGGTIPETGDYNVLLEPQAVVVGTVNEDFAVESLAGDVFQLGNRSYRIMRVEMGRLRVEDAQGQPPNIPFWLGEAPGRTDELSIGVARLRAEISESFDEGGREGALIWLTGELGLGKAAAEQVVDYLFRARAALGALPTRDTLVMERFFDESGGTQLIIHTPFGSRINRAWGLALRKRFCRKFNFELQAAATEDAIVLSLSTSHSFPLDEVARYLHSNTAEHVLIQALLDAPLFGVRWRWNATTALALPRFSGGKKVAPQLQRMKSEDLLATVFPDQVACAENLVGEREVPDHPLVNQTIDDCLHEAMDCEGLLAILRGLESGAIRMISRDLATPSPLAAEILNAAPYAFLDDAPLEERRTQAVQSRRWSDAESADDLGRLDADAIASVRDEAWPEARSADEMHEALMLLGAVTEDDVREHPTWAGLLSALAKNARATLLTHGHASLWVAAERLPTWRAIGPGAAMSPAIAAPAEFEAQAWTPEAALIDIVRGRLSGLGPVTALALAGSLGVASGELDLALTSLETEGYVMRGPFSPGTTEVEWCERHLLARIHRYTIGRLRREIEPVAPRDFMRFLLDWQHVTRGTQVAGPDALAGVIAQLEGFEAAAGGWESELLPARVSDYSIGWLDDLCRAGRVVWSRLRLGTGSGGPVRSTPIVLLPRRQLPIWSAAAPAITDELPLSSRAQAVADALRDEGALFFDELATSTRLLRTELEDALGELVAAGRVTADSFAGLRALLLPASKRNGSRHRRTRRHLMSGIEDAGRWALARRPTELRNDADGLEHMARTLLRRYGVVSWRILEREAAWLPAWRDLRRVFHRLEARGEIRGGRFVDGLVGEQFALPEALPALRQIRHREHDGEMVCIAGTDPLNLVGTIIAGAAKVPAVLGTRIAIRDGMPLAAMIAGKFVTLMPLEGDDEREARSALQRHATFPVAMSF
>NZ_CP017480.1|WP_125903182.1|1745619_1747740_+|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein
MDRSLSVDRRAELVVAAMTDDEKFRLIRSDFGLASDKHGVPEGAVSGAGYVPAFPRLGLPAINETDAGLGVNKPGIDGKGAISLPAGLATAASFDTAVAHAGGRMIGGEARGKGYAVLLSGGVNLVRDPRNGRNFEYAGEDPILAGTIVGATIKGIQEQKIVATTKHFAINDLESGRNTLSSDIDPVALRESDLLAFQIAIAHGDPGSVMSSYNRVNGTFAGEHDWLLNQVLKQEWGFKGFVMSDWGGVHSGAKAALAGLDQESAGEVFDAEVYFDKPLRAAVASGEVPKARLDDMARRIMRSLFAHGVIDNPIPTRPTTPVPYDADRKIARDTLEAGAVLLRNQAGLLPLSRTGQSVVVIGAHADKGVLAGGGSSTVTDVGGDPVPGLQPTGWPGPVRYHASAPLTFMQKLGGKVSFDPGTDPAAAAKAAAAADVAVVFVTQWAAESFDVPDMSLPDGQDALVAAVAKANPKTVVVLETNGAVKMPWLDNVGAVLQAWYPGSGGGDAIARLLYGETSPSGRLPVSWPKDEAQLPRPTIQGAGLYSKAKPADNVDYNIEGADVGYRWFEKTKREPLFAFGYGLTYTSFAYSDFKVDKDAKGRPVAHVTVKNTGKTAAADVPQVYVTAPGAATRRLAGWSKVALKPGASRRVDITLEPLALARYDDAGKRWRVAPGSYAVKLGRSASDIAAEATVTVDESFPVVKAP
>NZ_CP017480.1|WP_052767266.1|1747783_1748560_+|transporter
MNLRSLPIVAPLLCLASAPAFADPPDFDRPGAGFATSVLPVGTLALEQGLPTYERQRQGGLLDKTYTADSLIRIGLGGPAELQVGGSAWNRLEERGGDSRRHAVGHGDTSIGLKIAPGGSADAGSLSWAALGQVTFANGDQDFNNGAKQYTLGVTGQWKPNDTWQGTLFANVDRLQGRNTWTLAPTFGRKFGENWMAYVETDAIHDAEDGNELQAGGGVAYTIGDHAQLDAYALHRIGTHGPSVVAGIGVSVFFGKKI
>NZ_CP017480.1|WP_169749265.1|1748668_1748830_-|hypothetical-protein
MGCLPLPLFMLLGLGIGYLVDSRAGAVWGGGIGLMIGLVLTALLVRAMRKANR
>NZ_CP017480.1|WP_046968405.1|1749177_1749357_-|hypothetical-protein
MQREPGKRDYGSSDCARLRNLASRGVPITQTAPKPAPPTPPRDVREHRVRPRPERYTGA

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Crispr_ID: NZ_CP017480_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP017480_2

2311906-2312005

Orphan

Consensus_repeat	Method
ATCGCCGATGAATCGGCTCCCACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP017480_2

>merge|NZ_CP017480|2|2311906-2312005|CRISPRCasFinder
ATCGCCGATGAATCGGCTCCCACAGAGAGCTTTAGAGCATCGCCGATGAATCGGCTCCCACAGAGAGCTTTAGAGCATCGCCGATGAATCGGCTCCTACA

>NZ_CP017480|2|2|2311906-2312005|CRISPRCasFinder
ATCGCCGATGAATCGGCTCCCACA	GAGAGCTTTAGAGCATCGCCGATGAATCGGCTCCCACAGAGAGCTTTAGAGC
ATCGCCGATGAATCGGCTCCTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP017480.1\|WP_046967903.1\|2308211_2308973_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378924
NZ_CP017480.1\|WP_071924922.1\|2321915_2322683_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|372641
NZ_CP017480.1\|WP_046967908.1\|2313453_2314152_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_CP017480.1\|WP_046967904.1\|2309032_2310079_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381306
NZ_CP017480.1\|WP_046967907.1\|2312007_2313384_-\|leucyl-aminopeptidase-family-protein	unknown	unknown	gnl\|CDD\|238247
NZ_CP017480.1\|WP_046968629.1\|2323417_2323981_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP017480.1\|WP_046967899.1\|2301730_2303728_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|163497
NZ_CP017480.1\|WP_046968628.1\|2324111_2324798_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_CP017480.1\|WP_046967906.1\|2311453_2311804_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017480.1\|WP_046967901.1\|2306878_2307364_+\|DUF4019-domain-containing-protein	unknown	unknown	gnl\|CDD\|372517
NZ_CP017480.1\|WP_046968630.1\|2321069_2321852_+\|NrdJb	unknown	unknown	gnl\|CDD\|236330
NZ_CP017480.1\|WP_071924921.1\|2315904_2317275_-\|Do-family-serine-endopeptidase	unknown	unknown	gnl\|CDD\|273938
NZ_CP017480.1\|WP_046967900.1\|2303878_2305354_+\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|184146
NZ_CP017480.1\|WP_078023135.1\|2314157_2315696_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270371
NZ_CP017480.1\|WP_046967919.1\|2306145_2306775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017480.1\|WP_046977389.1\|2317640_2319788_+\|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase	unknown	unknown	gnl\|CDD\|274168
NZ_CP017480.1\|WP_154670743.1\|2322591_2323374_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP017480.1\|WP_046967902.1\|2307512_2308112_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP017480.1\|WP_046967905.1\|2310197_2311196_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP017480.1\|WP_052767208.1\|2305390_2306095_+\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|377344

Protein	Function_ID	Function_description	E-value
NZ_CP017480.1\|WP_046967903.1\|2308211_2308973_+\|alpha/beta-hydrolase	gnl\|CDD\|378924	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family contains alpha/beta hydrolase enzymes of diverse specificity.	8.46041e-17
NZ_CP017480.1\|WP_071924922.1\|2321915_2322683_+\|ATP-binding-protein	gnl\|CDD\|372641	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	1.09758e-21
NZ_CP017480.1\|WP_046967908.1\|2313453_2314152_-\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	1.21669e-33
NZ_CP017480.1\|WP_046967904.1\|2309032_2310079_+\|aldo/keto-reductase	gnl\|CDD\|381306	cd19080, AKR_AKR9A_9B, AKR9A and AKR9B families of aldo-keto reductase (AKR). The AKR9A family includes Aspergillus nidulans sterigmatocystin biosynthesis dehydrogenase StcV, Aspergillus flavus norsolorinic acid reductase (NOR), and Phanerochaete chrysosporium aryl-alcohol dehydrogenase [NADP(+)] (AAD), are founding members of aldo-keto reductase family 9 member A1-3 (AKR9A1-3), respectively. StcV may be involved in the dehydration of 5'-hydroxyaverantin to form averufin. NOR is involved in aflatoxin biosynthesis. AAD (EC1.1.1.91) is involved in lignin degradation and reduces aromatic benzaldehydes to their respective alcohols in the presence of NADP(H). The AKR9B family includes Saccharomyces cerevisiae aryl-alcohol dehydrogenases AAD14p, AAD3p, AAD4p, and AAD10p, which are founding members of aldo-keto reductase family 9 member B1-4 (AKR9B1-4), respectively.	1.66115e-154
NZ_CP017480.1\|WP_046967907.1\|2312007_2313384_-\|leucyl-aminopeptidase-family-protein	gnl\|CDD\|238247	cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.	1.38824e-172
NZ_CP017480.1\|WP_046968629.1\|2323417_2323981_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.11788e-08
NZ_CP017480.1\|WP_046967899.1\|2301730_2303728_+\|HAMP-domain-containing-protein	gnl\|CDD\|163497	TIGR03785, marine_sort_HK, proteobacterial dedicated sortase system histidine kinase. This histidine kinase protein is paired with an adjacent response regulator (TIGR03787) gene. It co-occurs with a variant sortase enzyme (TIGR03784), usually in the same gene neighborhood, in proteobacterial species most of which are marine, and with an LPXTG motif-containing sortase target conserved protein (TIGR03788). Sortases and LPXTG proteins are far more common in Gram-positive bacteria, where sortase systems mediate attachment to the cell wall or cross-linking of pilin structures. We give this predicted sensor histidine kinase the gene symbol psdS, for Proteobacterial Dedicated Sortase system Sensor histidine kinase.	4.86773e-150
NZ_CP017480.1\|WP_046977389.1\|2317640_2319788_+\|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase	gnl\|CDD\|274168	TIGR02504, ribonucleotide_reductase, ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent. This model represents a group of adenosylcobalamin(B12)-dependent ribonucleotide reductases (Class II RNRs) related to the characterized species from Pyrococcus, Thermoplasma, Corynebacterium, and Deinococcus. RNR's are responsible for the conversion of the ribose sugar of RNA into the deoxyribose sugar of DNA. This is the rate-limiting step of DNA biosynthesis. This model identifies genes in a wide range of deeply branching bacteria. All are structurally related to the class I (non-heme iron dependent) RNRs. In most species this gene is known as NrdJ, while in mycobacteria it is called NrdZ. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP017480.1\|WP_046967901.1\|2306878_2307364_+\|DUF4019-domain-containing-protein	gnl\|CDD\|372517	pfam13211, DUF4019, Protein of unknown function (DUF4019). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 130 and 183 amino acids in length. There is a single completely conserved residue E that may be functionally important.	6.74994e-21
NZ_CP017480.1\|WP_046968630.1\|2321069_2321852_+\|NrdJb	gnl\|CDD\|236330	PRK08665, PRK08665, vitamin B12-dependent ribonucleotide reductase.	1.08428e-13
NZ_CP017480.1\|WP_071924921.1\|2315904_2317275_-\|Do-family-serine-endopeptidase	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.36374e-163
NZ_CP017480.1\|WP_046967900.1\|2303878_2305354_+\|anthranilate-synthase-component-I	gnl\|CDD\|184146	PRK13565, PRK13565, anthranilate synthase component I; Provisional.	0
NZ_CP017480.1\|WP_078023135.1\|2314157_2315696_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.21651e-39
NZ_CP017480.1\|WP_046967902.1\|2307512_2308112_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	6.10333e-11
NZ_CP017480.1\|WP_046968628.1\|2324111_2324798_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	9.47607e-40
NZ_CP017480.1\|WP_046967905.1\|2310197_2311196_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.68216e-30
NZ_CP017480.1\|WP_052767208.1\|2305390_2306095_+\|SIMPL-domain-containing-protein	gnl\|CDD\|377344	pfam04402, SIMPL, Protein of unknown function (DUF541). Members of this family have so far been found in bacteria and mouse SwissProt or TrEMBL entries. However possible family members have also been identified in translated rat (Genbank:AW144450) and human (Genbank:AI478629) ESTs. A mouse family member has been named SIMPL (signalling molecule that associates with mouse pelle-like kinase). SIMPL appears to facilitate and/or regulate complex formation between IRAK/mPLK (IL-1 receptor-associated kinase) and IKK (inhibitor of kappa-B kinase) containing complexes, and thus regulate NF-kappa-B activity. Separate experiments demonstrate that a mouse family member (named LaXp180) binds the Listeria monocytogenes surface protein ActA, which is a virulence factor that induces actin polymerization. It may also bind stathmin, a protein involved in signal transduction and in the regulation of microtubule dynamics. In bacteria its function is unknown, but it is thought to be located in the periplasm or outer membrane.	8.54622e-20

>NZ_CP017480.1|WP_046967906.1|2311453_2311804_+|hypothetical-protein
MSEFEPPSREYTRPPMTRGVDPQRMNWLWQLILQSTDLDPDEVREALVASGVAATSKRLHSWQVSDRDDAYFPLSIAELERNLRAVVALKKQRADAIDAAADAVVADQIADSEPEA
>NZ_CP017480.1|WP_046967905.1|2310197_2311196_-|alpha/beta-hydrolase
MRRTLIALALLCIATPLLADDTPTIKDLGPRLEHLDYPYPVTLFPVTSQGQSLEMAYMDLKPEKANGRTVVLLHGKNFCGPYWQATAEHLRVAGYRVVIPDQIGFCKSSKPRGYQYGIEQLAANTHALLASLGVDKVTVVAHSMGGMIGTRYALMYPQGVEKLVLVDPLGLEDWQAKGVPWRSVDEWYASELKTSYATIRAYQLKSYYDGKWKSDYDRWAVMQAGMYEGSGRDTVAWAGALTYDMIFSQPVVHEFPNIRVPTVLIIGQADKTAIGKDAAPSSVRDTLGNYAELGKEAAATIPGAKLIPLDGLGHAPMIEAPERFYKALDQAL
>NZ_CP017480.1|WP_046967904.1|2309032_2310079_+|aldo/keto-reductase
MRYKLFGKHTGLRVSELVLGTGSFGTRWGHGSEPDEAKRMLDAYADAGGNFIDTADSYQFGESEEILGTLLVGRRNEFVLATKFSQSAQANAGLLVTGNSRKAMVASLDASLKRLDTDHVDLYWVHYADGVTPMEEIVRGFDDLVRAGKILYAGLSDFPAWRVSRAATIAELRGSIPIAGLQVEHSLVERSTEQELLPMGEALGLGVVAWSPLGGGMLTGKYRQGERGRAEGFGGRVFQAEDTKQRTAILDAVIATADELGVTPGEVAIAWVAAKGALPIIGPRSVAQLQANLAAVKVVLSPDQLARLDTVSALRPVFPHSLLEDPANRDRIFSGKLAQFVPPREQVA
>NZ_CP017480.1|WP_046967903.1|2308211_2308973_+|alpha/beta-hydrolase
MSKFSTLFALGALTLGVAGTPAAQAAPIHNVVLVHGAFADGSGWRAVYDSLAAKGYKVSIVQIPETSLAADVDATQRVIDQQDGPTVLVGHSWGGQVITEAGADPKVKSLVYLAALVPDVGESTATLETMAKYPAPNDDVKKTADGKFFYMDPTKFRENFAADSSPALADFMAHSQVILSVEAFGTPAKAAAWHTKPSWAVLPGADKTINMDLQRWMYERAKAKVTTVPGSSHTVFLSHPDVVVKVIEEAAGK
>NZ_CP017480.1|WP_046967902.1|2307512_2308112_-|TetR/AcrR-family-transcriptional-regulator
MRVSKEKSAENREALLAAASRLFREKGVDGVGVAEVAKEAGLTHGALYAHFPSKDLLAAEAFSHGFAQRMDRARAWAGDRHPSFEEYLDGLYTTRQRDDLTTSCPMTASASDVGRQGEALSRSFAQAFEEEVSMMAGAIDETVPQDVRRQLAVASIAAQIGAIAVSRAVAKTDAALSDEVLLATRDAIAAAFAARTAVV
>NZ_CP017480.1|WP_046967901.1|2306878_2307364_+|DUF4019-domain-containing-protein
MAPASAVARKIPAPRLTGTNAYGAMLTVAHEPRLGPQPNSLDNAVANATHWVQLSNARRPDAMWLEAGAMMQRLVPRAEWVRYMRKIRVDRGALTGREWFEVTRVRDPVGLPAGDYLNVIFIAQFARAVLFETVSLAPGSAGWMPVGYVIRPVQREISFVQ
>NZ_CP017480.1|WP_046967919.1|2306145_2306775_+|hypothetical-protein
MAATSAPSAHAREPFTDDVASRTQALALLETLNADLLSHPSATLTLERWCSDHALAGDAKILARQVKGQDKPLPADDRQTLAIGPDEPVKYRRVQLACGDHVLSEADNWYVPSRLTPEMNQILDTTDQPFGKVVQPLHFRRQTISADLLWSPLPKGWEMAAPLPPATKGPLAIPHELLRHRAVLFTEANQPFSLVVETYTAEVLAFGRR
>NZ_CP017480.1|WP_052767208.1|2305390_2306095_+|SIMPL-domain-containing-protein
MNRYVLAVALAVLPMLALASETPSSPYLSAKGHAERTVQPDRFGIDLRVVAVDMKPALARNRVETLMAGVLAGFKAHHALPESIDATAISVFAKTEYRDDKEAFSGTEVSRTAHAVFANLDDLRQFIDGIEADKELQITGTKVTRSDIDSVRQDVLREAIKDSMRAAKAMAEAYGVRLGTLYTVTDSPTFVGGRDELFSMTLPVPEPRAKVDLQVGGMKVEQNVFAIYFIDTGK
>NZ_CP017480.1|WP_046967900.1|2303878_2305354_+|anthranilate-synthase-component-I
MISRKQFDAYAAQGHTRIPLVREVFSDLDTPLSVYLKLADGPYTFLFESVEGGATWGRHSIIGLPARRVYRLRGHELEVEESGEVIERRHLDDPLAEIEVLRKQYDVPKLPGLPDFTGGLVGYFGFETIGYIEKRLAQWDKRDEIGTPDVLLMLADEVAVFDNLKGRLYLIVHADPSKPQAYADASRRLDALAFRLRQGGVSYPQMLQPAAIDESDFKSSFTREEYENVVRKAQEYIRAGDIFQVVPSQRLSVKFNARPVDVYRALRAMNPSPYMFFIDMGPTQIVGSSPEILVRLKAGRVVLRPIAGTRRRGADEAEDVALETELLADPKERAEHLMLIDLGRNDVGRVSKTGTVELSESFVVERYSHVMHIVSQVEGDIREDLSYMDVIKATFPAGTVSGAPKIRALEIIQELEPFKRNIYAGAIGWLGWWGDADTAIAIRTAVIQDGRLHVQAGGGVVYDSDPAAEWEETMNKGRALFRAVAQAAKGL
>NZ_CP017480.1|WP_046967899.1|2301730_2303728_+|HAMP-domain-containing-protein
MSLRQKLLLVALCTLALPVAGWLYVRQMETLLREGQAQALVASARALARSLVVVDAPLPPAGNAWYVQHTPSAITMDGYADDWASLSPWAQTLGKNARVMLAEDDHWLYFYIDVRATHRRRADADDRLALSADHLIVSIASGDDAQRYLMASAAPGATTAIALDPEAGVLPDRINAQWQEDGSGFRAEFRLPRGLRLDHFGVGVHVAADGDNEPLTAETRPILDFSAPLSQELARLAPDGVRVRVLSPDAWLVAQSGKLDLPDLPAAERPGWFASLVYRSLLATRLDDEGGWAEDAPRIDLPEVREALLGKPATAWRAGESRGSVVLAAALPIQGGGKLRGVVLLEQPSRAVPLLANRALFGLLLTSFAVLLIAGGVLLLFATRLTFRLRRLRNAAERAQDNDGRLDGPFPLIDATDELGDLARSFARLFEVVGGYTDYLRTLASKLSHELNTPLAIVKSSLDNLDHAGLPPEAEPYLARARDGVARLGALVRAMSEASRMERAIASAEAEDVNLADIVRGCADGYRGLAGDRTLEAVLPPGPVPMHVSPELIAQALDKLFDNALSFTPPGGWLRITLSPTAEGADVELANEGPSLPAAMQGRLFDSLVSLRDKATPGDAPHLGLGLYVVRLVAERHQGSASARNIEGGVAFTLHLKGLPRQRLA
>NZ_CP017480.1|WP_046967907.1|2312007_2313384_-|leucyl-aminopeptidase-family-protein
MSPLIERKTGKRVAIPIETVDVAGMVAAEARLGPAHRQWLVSTAYRATPGAILVLPDVKGAIARVLVGVDRNDPLAALGSLPSRLPEGLYELAEESVIEDRDLLALGWALGAYRFDRYRTRARPPAQLVVDAATLRSVQPVIDATNQVRDLVNTPTEDMGPEHLSAAIRAHADEHKAKVQEWVGDELLAANFPTIHAVGRASHRPPRMIELTWGKNSNPKLVIIGKGVCFDTGGLDIKPADGMRWMKKDMGGAAHAIALAGLVMQARLPVRLTLLVPAVENAIAGNAMRPGDVIKTRGGQTVEVDNTDAEGRLVLCDAIAYAVEQAPDLIVDFATLTGAARVALGPELPALFTNRDQLADHVIGAAELVGDPLWRLPLWRPYRRMLESYVADFANAGPSRHAGAITAALYLERFVPETQNWMHLDTYSWNDTDRPAHPRGGEAQGLRAFYRFLSERYS
>NZ_CP017480.1|WP_046967908.1|2313453_2314152_-|HAD-family-hydrolase
MAVRAVSLDLDDTLWPVLPALIEAEHVVDRWLRQHHPDVANAWPIEAMRELREQIARDNTHLSHDFSEQRRMTIRAAFAHCGIDDAPVDELWRLYYAARNNVELYPDSLPALERIAHRVPIVSISNGNADLEIIGLHHLFHTRISAGGLGVAKPDARIFLAAAEALGIAPADILHVGDDPLLDVVGAREAGLRTVWLNRTGEAWSHGPAPDLEFPDMTHLADWVEASALTDS
>NZ_CP017480.1|WP_078023135.1|2314157_2315696_-|substrate-binding-domain-containing-protein
MPNPASVPRFLPSMSLRLARLFTATLIGLSASATLFAADTALVWRGDITTARGVVIDVAKAWEKSGKGKFELQPFNTASGIDAVVKGTADIAGSARPAVGAAEQSLTFTPVAWDALVMVTYPSNPVSNITLKQLHEIYMGHITNWKDLGGADQPINLYAVASPADGVEYSMRRLLFGRGNQPVAAPRLYVNVAKLEEGVTLDKQGLGATTLAGVASNKKVKILQIDGVTPSASTVASGAYVLYSEIYLVTNDTNPKAAEIKEFLAFVTSSTGSSLLRSHSLVPYADGASLAAGDAARRATIASTVGTRANVGQAMTTAPTVAAAAPAEAAKEVAVAKAETKGKGGKAAKEAKASVAAAAAEPSQFAKVVASVSTSAHMGFSGVRSEAFTASDNAKAGGKFAKVLADAVVVKGKLAAKPAAPIDSSEKSTKIATPKVTEAKPAPAAKPEAKAAVAKAASKPAAAASHTYKVSAGDTLYSIAKKNAVDVNQLRAMNGLKDNNVHAGQVLKVSAR
>NZ_CP017480.1|WP_071924921.1|2315904_2317275_-|Do-family-serine-endopeptidase
MTASAYRRTKIFSLVAALGFALASPAFAGLPPSIDGQPMPSLAPMLAKVTPAVVNISTKTRVRTRNPYYDDPVFRQLFGNQGVPRERVEQSLGSGVVIDAEKGYVLTNHHVVGGADDITVTLQDGRDFKAKLLGSDPETDVAVLQIPAERLQALPIADSSALRVGDFVVAVGDPFGLGQTATSGMVSALGRSGLGKGFQNFIQTDASINPGNSGGALVNLRGELVGINSMIFTPSGGNVGIGFAIPTDLATGVMKQLLSYGKVRRGNLGVEVQDITPRIAQALRLKDSNGAVVTRINEGSPADGAGLQTGDVLTAIDGKAVRSAQDVRNTEGLLPLGAKVKLSVQREGASRDVEATIAAVAIASVDGGKVDPRLAGVTLSDLTADQKAGGLFGVVLGGVKRGSVAASAGLKDGDVVVGVQQRKVVSVKGLPLGAGASGGQLLLTVVRDGSVYYAVL
>NZ_CP017480.1|WP_046977389.1|2317640_2319788_+|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase
MSTARAQAMGLETAAIPLQPASYDIWDKKYRLKAKSGAPVDGSVDETYQRVARALSDVEATDELRAHWFERFLWALRRGAIPAGRITSNAGALEHKPATSTINCTVSGTIHDSMDDILEKVHEAGLTLKAGCGIGYEFSTLRPRGAYVSGAGAHTSGPLSFMDIYDKMCFTVSSAGGRRGAQMGTFDIAHPDAKEFIRAKREDGRLRQFNLSLLITDGFMEAVEKDQDWPTVFPVHVKEQHEIDLNDATKVLWREWPTKQNYVTREDGLVACKIYGHIRARHLWDMIMVSTYDYAEPGFILIDRVNEMNNNWWCEHIRATNPCGEQPLPPYGSCLLGSINLTIFVRDPFGPKARFDWDEYREVVRVFTRMLDNVVEINGLPLAQQREEIISKRRHGMGFLGLGSTVTMLKMRYGNADAVAFTEEVSREMAVAGWEVALELAKEKGPAPVLAREYEVTAEMLRKRPEMVKDGWKVGQSIRGSALHAKYSRYMQRVAEVAPELIEALAETGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSRNVIREGKKSKEKVEVFSYELLAYRALINSEALPFSDDPKTRLPDYFVSADDISPKEHVDIQAASQKWIDSSISKTANVPTDYPYEDFKDIYMYAHKQGLKGCTTFRFNPAAFQGVLVKETDLENTLYRFELEDGSVVELKGNEEVEYDGEMHTAANLFDALKEGYYGKF
>NZ_CP017480.1|WP_046968630.1|2321069_2321852_+|NrdJb
MAIKIEKKIKGYNVVKPEDKAAPAPAPVPVKEAAPVAEVIQMHESLERPETLVGSTYKIKSPLFEHALYVTVNDIVLNAGTKHEQRRPFELFINSKNMDHFQWIVALTRILSAVFRKGGDVTFIVEELKAVFDPRGGYFKTGGVYMPSIVAEIGAVVEQHMKSIGLIHDPEMSDATRALIAEKRAAYEKAAKPATPAAATTAAPVGAGSAGDSQAAAEAAHMNASGFPAGATLCAKCNTQALVLMDGCQTCLNCGYSKCG
>NZ_CP017480.1|WP_071924922.1|2321915_2322683_+|ATP-binding-protein
MAQGNSTVVPDASEGVPEFHNFTVDAALFRELGERLVGRPHVALAELVKNAYDADASEVLIDFANDAITVTDNGHGMTRDEFLSFWMRVGTTHKQRDFRSRGLDRQVTGSKGVGRLSAQFLGDTLQLRTIASGEQRIGVRADVDWRGAKAAGDLIRAGATVRNLVAPSALANRYKTGVQVRIGALKHEWGHKELQELARELWFLRPPRALHGDLGADDDFVVRLAGVSSEDAHAFHRSHRLECRGQVEWRSQPQW
>NZ_CP017480.1|WP_154670743.1|2322591_2323374_+|hypothetical-protein
MFHLRMLTPFTEVIVWSVEVKSNGDLNLNGEFPIVSNGAYIGNKMYPGFVSNLAALKSAGVKRITFSIGSSNVGDFQDIKALVNSTGAGGGTGTQSTLYRNFQALKQAIPSIDAIDLDDENSYDAASTVAFSVMLGKLGYHVMPDAYTNASYWKSVVTQINSQRAGTVDGVHLQAYAGGAGNSPCSGWDFGGVPVYPGLGDSSIGGDTVPSAQSKIAGWTAQCNITGAFLWLYDDVAGKTYQGKTLSAAYAGALDAGLSP
>NZ_CP017480.1|WP_046968629.1|2323417_2323981_-|TetR/AcrR-family-transcriptional-regulator
MNTNMRESIMSAARMAVQGHGYNALSFRELAKAVGIKSASVHYHFPTKGDLAAALAKRYADEAEVFFDELLATPQTHDALMRAYTSAFRKALEDDNKMCLCGIMSAEYTDLPDIARVEVDRFTAVNTRWLLRVLTDRHPNAPHDALEARSLAIFAAIEGAQLVARGRADLASFDRIIEAYHASGLFD
>NZ_CP017480.1|WP_046968628.1|2324111_2324798_+|glutathione-S-transferase-family-protein
MKIYDRPGFPNPSRIRIVLAAKGLDQAVEFVPVDLIGAEHKQAAFLSKNPSGVVPVLELDDGTLISESTAITEYFDNLDGNPILTGRTPKEKAVIHMMQRRAEAYVTDPIGLYFHHATSGLGDTLKAYKSPDWDGREAMGQREGDKVRASLTYFNELLQSRPYLAGDAFSMADITLFAGLMHADVSGITVPADYTALLDWRVRVSELPSVKNRSGQNFLQEDLTRLGF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2509358 : 2519848

Enterobacteria_phage(37.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046968543.1\|2509358_2510729_+	pyridoxal-phosphate dependent enzyme	A0A1X9I5F1	Streptococcus_phage	1.8e-50	38.1
WP_046968542.1\|2510744_2512574_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	Q84421	Paramecium_bursaria_Chlorella_virus	1.9e-127	42.6
WP_046977973.1\|2512602_2513070_+	N-acetyltransferase	NA	NA	NA	NA
WP_046968540.1\|2513045_2513966_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.5e-26	37.6
WP_046968539.1\|2513962_2514520_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	4.9e-47	53.6
WP_046968538.1\|2514516_2515404_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	7.0e-96	58.6
WP_046968537.1\|2515400_2516444_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.2e-82	47.6
WP_046968536.1\|2516645_2517815_+	PLP-dependent transferase	A0A0B5JD48	Pandoravirus	1.4e-27	28.2
WP_046968535.1\|2517833_2518628_+	ABC transporter permease	NA	NA	NA	NA
WP_046968534.1\|2518624_2519848_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.1e-10	23.9

DBSCAN-SWA_2

3112057 : 3162227

Burkholderia_phage(21.88%)

terminase,portal,protease,head,tRNA,holin,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046966089.1\|3112057_3113182_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_046966088.1\|3113178_3113667_-	NUDIX hydrolase	NA	NA	NA	NA
WP_046966087.1\|3113791_3114124_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.4e-11	40.7
WP_046966086.1\|3114201_3116469_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.4e-169	44.1
WP_019466733.1\|3116710_3116929_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_046966085.1\|3117012_3117288_-	polyhydroxyalkanoic acid system family protein	NA	NA	NA	NA
WP_046966084.1\|3117427_3118198_+	FHA domain-containing protein	NA	NA	NA	NA
WP_046966083.1\|3118237_3119323_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.2e-85	47.1
WP_046966082.1\|3119403_3120504_+	prephenate dehydratase	NA	NA	NA	NA
WP_046966081.1\|3120500_3121613_+	histidinol-phosphate transaminase	A0A1X7QHI1	Faustovirus	6.8e-16	26.8
WP_046966080.1\|3121609_3122920_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_046966079.1\|3122978_3123761_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_046966078.1\|3123980_3125804_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_046966077.1\|3125821_3126436_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_046966076.1\|3126909_3128049_-	hypothetical protein	V9IQN0	Stenotrophomonas_phage	2.1e-65	36.3
WP_046966074.1\|3128252_3128489_-	hypothetical protein	NA	NA	NA	NA
WP_046966150.1\|3128488_3128986_-	DUF1643 domain-containing protein	A0A0U1W068	Pseudomonas_phage	2.6e-31	50.3
WP_156165885.1\|3129098_3129572_+	hypothetical protein	NA	NA	NA	NA
WP_046966072.1\|3129583_3130102_-	hypothetical protein	R4TPW0	Mycobacterium_phage	1.3e-30	42.9
WP_046966071.1\|3130098_3130449_-	hypothetical protein	K7PKY8	Enterobacterial_phage	7.1e-12	37.6
WP_046966070.1\|3130448_3131357_-	recombination-associated protein RdgC	Q8H9Q5	Vibrio_phage	2.7e-50	37.8
WP_046966069.1\|3131365_3131617_-	hypothetical protein	NA	NA	NA	NA
WP_169749260.1\|3131650_3132166_-	single-stranded DNA-binding protein	A0A291LCB6	Klebsiella_phage	5.5e-37	64.7
WP_046966067.1\|3132162_3132366_-	hypothetical protein	NA	NA	NA	NA
WP_046966066.1\|3132600_3132816_-	hypothetical protein	NA	NA	NA	NA
WP_046966065.1\|3132812_3133061_-	hypothetical protein	I6NMA0	Burkholderia_phage	9.2e-22	60.5
WP_046966064.1\|3133057_3133306_-	hypothetical protein	NA	NA	NA	NA
WP_046966063.1\|3133302_3133554_-	hypothetical protein	NA	NA	NA	NA
WP_052767018.1\|3133682_3134345_+	hypothetical protein	A0A0U4J8W4	Pseudomonas_phage	5.6e-34	38.5
WP_078023197.1\|3134401_3135193_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046966061.1\|3135642_3136098_+	hypothetical protein	Q3HQZ3	Burkholderia_phage	3.3e-17	43.4
WP_046966060.1\|3136514_3136760_+	hypothetical protein	NA	NA	NA	NA
WP_052767016.1\|3136761_3137553_+	hypothetical protein	K7ZLF3	Xanthomonas_citri_phage	1.6e-30	60.9
WP_046966059.1\|3137549_3138899_+	replicative DNA helicase	A0A2R3UA46	Siphoviridae_environmental_samples	1.3e-93	45.5
WP_046966058.1\|3138888_3139227_+	hypothetical protein	NA	NA	NA	NA
WP_078023199.1\|3139223_3139775_+	hypothetical protein	NA	NA	NA	NA
WP_046966057.1\|3139768_3140125_+	hypothetical protein	NA	NA	NA	NA
WP_046966056.1\|3140121_3140349_+	hypothetical protein	NA	NA	NA	NA
WP_052767013.1\|3140358_3141021_+	hypothetical protein	C8CLH7	Xylella_phage	7.4e-26	33.9
WP_046966055.1\|3141124_3141670_+	YfbU family protein	NA	NA	NA	NA
WP_046966054.1\|3141876_3142410_+	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	1.4e-38	47.6
WP_052767012.1\|3142406_3142751_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_046966053.1\|3142731_3143214_+	hypothetical protein	A0A2H4GY63	Pseudomonas_phage	2.3e-08	30.3
WP_046966052.1\|3143400_3143703_+	HNH endonuclease	NA	NA	NA	NA
WP_154670749.1\|3144147_3144360_+	hypothetical protein	NA	NA	NA	NA
WP_046966051.1\|3144364_3146035_+\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	2.2e-252	75.8
WP_046966050.1\|3146043_3147333_+\|portal	phage portal protein	Q3HQS8	Burkholderia_phage	3.9e-140	59.8
WP_046966049.1\|3147310_3148159_+\|protease	Clp protease ClpP	Q3HQS9	Burkholderia_phage	2.9e-91	62.9
WP_046966142.1\|3148161_3149397_+\|capsid	phage major capsid protein	Q3HQT0	Burkholderia_phage	4.4e-141	62.6
WP_046966048.1\|3149458_3149776_+	hypothetical protein	Q3HQT1	Burkholderia_phage	7.9e-10	68.2
WP_046966047.1\|3149778_3150258_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_046966046.1\|3150254_3150596_+\|head	phage head closure protein	NA	NA	NA	NA
WP_046966045.1\|3150588_3150801_+	hypothetical protein	A0A1V0E8A3	Vibrio_phage	1.2e-09	50.0
WP_046966044.1\|3150793_3151300_+	HK97 gp10 family phage protein	Q7Y5K5	Xanthomonas_virus	1.4e-24	45.7
WP_046966043.1\|3151296_3151653_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_046966042.1\|3151754_3152417_+\|tail	tail protein	C4ML12	Xanthomonas_virus	3.8e-46	47.8
WP_046966041.1\|3152413_3152716_+	hypothetical protein	NA	NA	NA	NA
WP_052767010.1\|3152715_3153024_+	DUF1799 domain-containing protein	A0A2D1GP80	Escherichia_phage	4.4e-05	34.7
WP_046966039.1\|3153027_3155631_+\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	4.4e-82	30.9
WP_046966141.1\|3155627_3155960_+\|tail	phage tail protein	NA	NA	NA	NA
WP_046966038.1\|3155956_3156664_+\|tail	phage minor tail protein L	A0A2R3UA90	Siphoviridae_environmental_samples	8.0e-79	57.5
WP_071924980.1\|3156663_3157389_+	C40 family peptidase	Q8W6T2	Burkholderia_virus	5.9e-61	52.1
WP_046966036.1\|3157416_3157848_+	hypothetical protein	NA	NA	NA	NA
WP_071924981.1\|3157904_3158588_+\|tail	tail assembly protein	A0A1V0E8A0	Vibrio_phage	1.6e-39	46.3
WP_046966035.1\|3158648_3162227_+\|tail	phage tail protein	A4JX16	Burkholderia_virus	5.2e-275	44.4

DBSCAN-SWA_3

4659372 : 4667211

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046969104.1\|4659372_4660800_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.0e-44	28.8
WP_046969103.1\|4661007_4661598_+	TIGR00730 family Rossman fold protein	A0A2I2L3F0	Orpheovirus	3.1e-07	24.3
WP_046969102.1\|4661834_4662200_+	twitching motility response regulator PilH	W8CYM9	Bacillus_phage	9.1e-10	32.5
WP_046969101.1\|4662345_4663263_-	DnaJ domain-containing protein	A0A0G2YAM9	Acanthamoeba_polyphaga_mimivirus	1.9e-11	61.2
WP_046969100.1\|4663353_4663806_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_046969099.1\|4663962_4664445_+	peroxiredoxin	A0A0C5AE74	Cyanophage	1.0e-21	43.3
WP_046969098.1\|4664580_4667211_-	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	1.3e-102	30.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017480

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection