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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017637 Bradyrhizobium japonicum strain J5, complete genome 3 crisprs csa3,DEDDh,RT,WYL,PD-DExK 0 3 13 0

Results visualization

1. NZ_CP017637
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017637_1 4843583-4843739 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017637_3 6476073-6476217 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017637_2 6475335-6475987 Orphan NA
10 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP016613 Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence 1268697-1268731 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP021449 Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence 1290679-1290713 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP049790 Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence 707503-707537 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP016915 Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence 1303020-1303054 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052129 Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence 732212-732246 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052111 Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence 587935-587969 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052113 Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence 587935-587969 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP049794 Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence 1964341-1964375 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP021763 Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence 1435807-1435841 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP015116 Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence 1613568-1613602 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP049792 Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence 1739502-1739536 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052069 Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence 1362213-1362247 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP016905 Ralstonia solanacearum strain KACC 10709 plasmid unnamed1 441887-441921 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP025986 Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence 1874222-1874256 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP015851 Ralstonia solanacearum strain YC40-M plasmid, complete sequence 1549678-1549712 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP022791 Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence 1407219-1407253 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP009763 Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence 1328597-1328631 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052085 Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence 1418854-1418888 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052095 Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence 1452945-1452979 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052077 Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence 1352394-1352428 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052087 Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence 1418854-1418888 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052097 Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence 1452945-1452979 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052127 Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence 1418854-1418888 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052079 Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence 1352416-1352450 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052089 Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence 1418057-1418091 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052093 Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence 1452945-1452979 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052101 Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence 1452945-1452979 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052099 Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence 1452945-1452979 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052125 Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence 1352416-1352450 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052123 Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence 1352416-1352450 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052131 Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence 1418853-1418887 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052081 Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence 1352416-1352450 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052083 Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence 1352416-1352450 6 0.829
NZ_CP017637_2 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder 6475480-6475514 35 NZ_CP052091 Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence 1452948-1452982 6 0.829
NZ_CP017637_2 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder 6475360-6475391 32 NC_020894 Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH1, complete sequence 112580-112611 8 0.75
NZ_CP017637_2 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder 6475360-6475391 32 NC_020894 Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH1, complete sequence 116892-116923 8 0.75
NZ_CP017637_2 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder 6475360-6475391 32 NC_017766 Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG1, complete sequence 112581-112612 8 0.75
NZ_CP017637_2 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder 6475360-6475391 32 NC_017766 Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG1, complete sequence 116893-116924 8 0.75
NZ_CP017637_2 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT 6475930-6475961 32 KY271399 Klebsiella phage 5 LV-2017, complete genome 16099-16130 8 0.75
NZ_CP017637_2 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT 6475930-6475961 32 NZ_CP023072 Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence 719092-719123 8 0.75
NZ_CP017637_2 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT 6475930-6475961 32 NZ_CP023065 Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence 717253-717284 8 0.75
NZ_CP017637_2 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder 6475360-6475391 32 NZ_CP039640 Azospirillum sp. TSH100 plasmid p1, complete sequence 196173-196204 9 0.719
NZ_CP017637_2 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT 6475930-6475961 32 NC_012586 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence 1202582-1202613 9 0.719
NZ_CP017637_2 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT 6475930-6475961 32 KU594606 Cyanophage S-RIM32 isolate RW_108_0702, complete genome 82865-82896 10 0.688

1. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

2. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

3. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

4. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

5. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

6. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

7. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

8. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

9. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

10. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

11. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

12. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

13. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

14. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

15. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

16. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

17. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

18. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

19. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

20. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

21. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

22. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

23. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

24. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

25. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

26. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

27. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

28. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

29. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

30. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

31. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

32. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

33. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

34. spacer 2.3|6475480|35|NZ_CP017637|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.829

ccaacaatggcggcggcctgatcttcaacaattcg--	CRISPR spacer
tcaacgatggcggcggcctgatcatcacc--ttcgag	Protospacer
.****.***************** *** *  ****  

35. spacer 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder matches to NC_020894 (Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH1, complete sequence) position: , mismatch: 8, identity: 0.75

cgaacagcggcaccttccggttctacgacacc	CRISPR spacer
aggtcgacggcaccttccagatctacgacaac	Protospacer
 *. *..***********.* ********* *

36. spacer 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder matches to NC_020894 (Streptomyces hygroscopicus subsp. jinggangensis TL01 plasmid pSHJGH1, complete sequence) position: , mismatch: 8, identity: 0.75

cgaacagcggcaccttccggttctacgacacc	CRISPR spacer
aggtcgacggcaccttccagatctacgacaac	Protospacer
 *. *..***********.* ********* *

37. spacer 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder matches to NC_017766 (Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG1, complete sequence) position: , mismatch: 8, identity: 0.75

cgaacagcggcaccttccggttctacgacacc	CRISPR spacer
aggtcgacggcaccttccagatctacgacaac	Protospacer
 *. *..***********.* ********* *

38. spacer 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder matches to NC_017766 (Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG1, complete sequence) position: , mismatch: 8, identity: 0.75

cgaacagcggcaccttccggttctacgacacc	CRISPR spacer
aggtcgacggcaccttccagatctacgacaac	Protospacer
 *. *..***********.* ********* *

39. spacer 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT matches to KY271399 (Klebsiella phage 5 LV-2017, complete genome) position: , mismatch: 8, identity: 0.75

ccaattccggctccatcgatttctggaattcg	CRISPR spacer
acaattccggctccgtcgatttttggccgtaa	Protospacer
 *************.*******.***   * .

40. spacer 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 8, identity: 0.75

ccaattccggctccatcgatttctggaattcg	CRISPR spacer
cgactgcctgctccatcgatttcgggaatgtc	Protospacer
* * * ** ************** ***** . 

41. spacer 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 8, identity: 0.75

ccaattccggctccatcgatttctggaattcg	CRISPR spacer
cgactgcctgctccatcgatttcgggaatgtc	Protospacer
* * * ** ************** ***** . 

42. spacer 2.1|6475360|32|NZ_CP017637|CRISPRCasFinder matches to NZ_CP039640 (Azospirillum sp. TSH100 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cgaacagcggcaccttccggttctacgacacc	CRISPR spacer
ggaacagcggcatcttcctgttctcggctgcg	Protospacer
 ***********.***** *****  * ..* 

43. spacer 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.719

ccaattccggctccatcgatttctggaattcg	CRISPR spacer
ccaattccggctggatcgatttcgccatcttc	Protospacer
************  *********   * .*. 

44. spacer 2.10|6475930|32|NZ_CP017637|CRISPRCasFinder,CRT matches to KU594606 (Cyanophage S-RIM32 isolate RW_108_0702, complete genome) position: , mismatch: 10, identity: 0.688

ccaattccggctccatcgatttctggaattcg	CRISPR spacer
gttataccagctccatcgatttctggtctaaa	Protospacer
 . ** **.*****************  *  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1416905 : 1423998 6 Salmonella_phage(16.67%) NA NA
DBSCAN-SWA_2 3268237 : 3274881 9 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_3 3747544 : 3805784 57 Bacillus_virus(18.18%) plate,transposase,tail NA
DBSCAN-SWA_4 5310103 : 5320294 12 uncultured_Mediterranean_phage(88.89%) tRNA NA
DBSCAN-SWA_5 5551998 : 5560528 9 Cafeteria_roenbergensis_virus(16.67%) tRNA,tail NA
DBSCAN-SWA_6 7476366 : 7487007 8 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_7 8704197 : 8767311 47 Acidithiobacillus_phage(25.0%) transposase NA
DBSCAN-SWA_8 8775522 : 8868542 51 Paenibacillus_phage(33.33%) transposase NA
DBSCAN-SWA_9 9213444 : 9263045 34 Enterobacteria_phage(25.0%) transposase NA
DBSCAN-SWA_10 9328866 : 9377095 32 Paenibacillus_phage(40.0%) transposase NA
DBSCAN-SWA_11 9383408 : 9434346 46 Acidithiobacillus_phage(28.57%) transposase,integrase attL 9419637:9419652|attR 9435983:9435998
DBSCAN-SWA_12 9996431 : 10019913 23 Paenibacillus_phage(50.0%) transposase,integrase attL 9987117:9987131|attR 10020584:10020598
DBSCAN-SWA_13 10030828 : 10080761 48 Acidithiobacillus_phage(22.22%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage