CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP015456	Pelobacter acetylenicus strain DSM 3246 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP015455	Pelobacter acetylenicus strain DSM 3246 chromosome, complete genome	3 crisprs	DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,cas3HD,WYL	0	16	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015455_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015455_1

896662-898521

TypeI-E

I-E

Consensus_repeat	Method
CCGTTCCCCGCAGGCGCGGGGATGAACCG	PILER-CR
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CRISPRCasFinder
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CRT
ACCGTTCCCCGCAGGCGCGGGGATGAACCG	PILER-CR
CCGTTCCCCGCAGGCGCGGGGATGAACCG	PILER-CR

30 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP015455_1

>merge|NZ_CP015455|1|896662-898521|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
CCGTTCCCCGCAGGCGCGGGGATGAACCGGCTGCTGGGCAAAAGGCTCTTCTGAATCGACACCGTTCCCCGCAGGCGCGGGGATGAACCGGTTTTCGCCGCGTCCACGGCCTCCGCATAGGTCCGTTCCCCGCAGGCGCGGGGATGAACCGAGGTTCGAGTGGCAACAGCCCATTAAGTACACCCGTTCCCCGCAGGCGCGGGGATGAACCGGTTTGCCACTTTAGTGGGTATTCCGAAATAATCCGTTCCCCGCAGGCGCGGGGATGAACCGATAGCCAGTGATAAGACCATCATTGTCATCATCCGTTCCCCGCAGGCGCGGGGATGAACCGATATGATCTTCTTCGCCGTTAACTATTGATCCCCGTTCCCCGCAGGCGCGGGGATGAACCGTTAACCACTGCATCCCCGTTGGGCAAAAACCGCCGTTCCCCGCAGGCGCGGGGATGAACCGCACGATTGGCGGGATAGGGAGTATTACAGGCCCCGTTCCCCGCAGGCGCGGGGATGAACCGTAGATGCAACGGTTCTCCGCGTTTGTCCCCGCCCCGTTCCCCGCAGGCGCGGGGATGAACCGACATTGTTCGTTGGGCATTAAAGCGTGGTAGGCCGTTCCCCGCAGGCGCGGGGATGAACCGCGGGGTGATTCCGGTAAATTGGGAGGTGTCGACCGTTCCCCGCAGGCGCGGGGATGAACCGGCCGGGGCATGGCACGAAGGCGTGAGATTAAACCGTTCCCCGCAGGCGCGGGGATGAACCGTGAGGTAACTGTGCAGCTGCTAAATTGCACCACCGTTCCCCGCAGGCGCGGGGATGAACCGGTGCCTGATGCAGATCAACGTTGAGATCCCTGCCGTTCCCCGCAGGCGCGGGGATGAACCGTTGCCCCGGAAGGCTTTCGCGCCGAAATAGCTCCGTTCCCCGCAGGCGCGGGGATGAACCGGAGGATGAGCGGCATGCAGCATACCAAGCCAGCCGTTCCCCGCAGGCGCGGGGATGAACCGCTGTGGCGCACAATACGGCCTGTGCGTGGTTTCCGTTCCCCGCAGGCGCGGGGATGAACCGGAACAGGGGTATCGGTACGTCTATGCCGCTGACCGTTCCCCGCAGGCGCGGGGATGAACCGCCTGCTGTAGTTTATACATTTTCGGCCCACATCCGTTCCCCGCAGGCGCGGGGATGAACCGCAGCCCACGAAACCGCGCTGGCCGAACATGCTCCGTTCCCCGCAGGCGCGGGGATGAACCGACAACGCCCGTTTAACCAGTCCGGTTGATTTACCGTTCCCCGCAGGCGCGGGGATGAACCGCGAGCGGTAAAAAAGGTGGGGCTGGCGGGGAGCCGTTCCCCGCAGGCGCGGGGATGAACCGCCTTTCGCAGTATGCAGAACGTCGCCAGCGATCCGTTCCCCGCAGGCGCGGGGATGAACCGCCGTTGCTGTAATAGGTGGTGTTGGCGGCGTGCCGTTCCCCGCAGGCGCGGGGATGAACCGCACCTGAGACAGCACCGGCAAATGAGCCCGCGCCGTTCCCCGCAGGCGCGGGGATGAACCGCCACACCTTGCCGCCTTGCGTCGCGGCCTGCTCCGTTCCCCGCAGGCGCGGGGATGAACCGGTCTTGACCCGCGTGCCCCACACGCCGACCACCCGTTCCCCGCAGGCGCGGGGATGAACCGTATTTTGGCTGGCGCGGCCTGAAAATTTGGTGCCGTTCCCCGCAGGCGCGGGGATGAACCGAATCGCTAAACCTTGCAAAAAACGGCTGGCACCCGTCCCCCGCATGCGCGGGGATGAACCGCCGGTGTGTCGCGAGAGGACGCAGAGCAAGCGCCGTTCCCCGCAGGCGCGGGGATGAAGCG

>NZ_CP015455|1|1|896662-897178|PILER-CR
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GCTGCTGGGCAAAAGGCTCTTCTGAATCGACA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTTCGCCGCGTCCACGGCCTCCGCATAGGT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	AGGTTCGAGTGGCAACAGCCCATTAAGTACAC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTGCCACTTTAGTGGGTATTCCGAAATAAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATAGCCAGTGATAAGACCATCATTGTCATCAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATATGATCTTCTTCGCCGTTAACTATTGATCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TTAACCACTGCATCCCCGTTGGGCAAAAACCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACGATTGGCGGGATAGGGAGTATTACAGGCC
CCGTTCCCCGCAGGCGCGGGGATGAACCGTAGATGCAACGGTTCTCCGCGTTTGTCCCCGCCCCGTTCCCCGCAGGCGCGGGGATGAACCGACATTGTTCGTTGGGCATTAAAGCGTGGTAGGCCGTTCCCCGCAGGCGCGGGGATGAACCGC	GGGGTGATTCCGGTAAATTGGGAGGTGTCGA
CCGTTCCCCGCAGGCGCGGGGATGAACCGG	CCGGGGCATGGCACGAAGGCGTGAGATTAAA
CCGTTCCCCGCAGGCGCGGGGATGAACCGT	GAGGTAACTGTGCAGCTGCTAAATTGCACCA
CCGTTCCCCGCAGGCGCGGGGATGAACCGGTGCCTGATGCAGATCAACGTTGAGATCCCTGCCGTTCCCCGCAGGCGCGGGGATGAACCGTTGCCCCGGAAGGCTTTCGCGCCGAAATAGCTCCGTTCCCCGCAGGCGCGGGGATGAACCG	GAGGATGAGCGGCATGCAGCATACCAAGCCAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CTGTGGCGCACAATACGGCCTGTGCGTGGTTT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GAACAGGGGTATCGGTACGTCTATGCCGCTGA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTGCTGTAGTTTATACATTTTCGGCCCACAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CAGCCCACGAAACCGCGCTGGCCGAACATGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ACAACGCCCGTTTAACCAGTCCGGTTGATTTA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CGAGCGGTAAAAAAGGTGGGGCTGGCGGGGAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTTTCGCAGTATGCAGAACGTCGCCAGCGAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCGTTGCTGTAATAGGTGGTGTTGGCGGCGTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACCTGAGACAGCACCGGCAAATGAGCCCGCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCACACCTTGCCGCCTTGCGTCGCGGCCTGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTCTTGACCCGCGTGCCCCACACGCCGACCAC


>NZ_CP015455|1|1|896662-898521|CRISPRCasFinder
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GCTGCTGGGCAAAAGGCTCTTCTGAATCGACA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTTCGCCGCGTCCACGGCCTCCGCATAGGT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	AGGTTCGAGTGGCAACAGCCCATTAAGTACAC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTGCCACTTTAGTGGGTATTCCGAAATAAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATAGCCAGTGATAAGACCATCATTGTCATCAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATATGATCTTCTTCGCCGTTAACTATTGATCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TTAACCACTGCATCCCCGTTGGGCAAAAACCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACGATTGGCGGGATAGGGAGTATTACAGGCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TAGATGCAACGGTTCTCCGCGTTTGTCCCCGCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ACATTGTTCGTTGGGCATTAAAGCGTGGTAGG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CGGGGTGATTCCGGTAAATTGGGAGGTGTCGA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GCCGGGGCATGGCACGAAGGCGTGAGATTAAA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TGAGGTAACTGTGCAGCTGCTAAATTGCACCA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTGCCTGATGCAGATCAACGTTGAGATCCCTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TTGCCCCGGAAGGCTTTCGCGCCGAAATAGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GAGGATGAGCGGCATGCAGCATACCAAGCCAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CTGTGGCGCACAATACGGCCTGTGCGTGGTTT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GAACAGGGGTATCGGTACGTCTATGCCGCTGA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTGCTGTAGTTTATACATTTTCGGCCCACAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CAGCCCACGAAACCGCGCTGGCCGAACATGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ACAACGCCCGTTTAACCAGTCCGGTTGATTTA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CGAGCGGTAAAAAAGGTGGGGCTGGCGGGGAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTTTCGCAGTATGCAGAACGTCGCCAGCGAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCGTTGCTGTAATAGGTGGTGTTGGCGGCGTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACCTGAGACAGCACCGGCAAATGAGCCCGCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCACACCTTGCCGCCTTGCGTCGCGGCCTGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTCTTGACCCGCGTGCCCCACACGCCGACCAC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TATTTTGGCTGGCGCGGCCTGAAAATTTGGTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	AATCGCTAAACCTTGCAAAAAACGGCTGGCAC
CCGTCCCCCGCATGCGCGGGGATGAACCG	CCGGTGTGTCGCGAGAGGACGCAGAGCAAGCG
CCGTTCCCCGCAGGCGCGGGGATGAAGCG

>NZ_CP015455|1|1|896662-898521|CRT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GCTGCTGGGCAAAAGGCTCTTCTGAATCGACA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTTCGCCGCGTCCACGGCCTCCGCATAGGT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	AGGTTCGAGTGGCAACAGCCCATTAAGTACAC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTGCCACTTTAGTGGGTATTCCGAAATAAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATAGCCAGTGATAAGACCATCATTGTCATCAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATATGATCTTCTTCGCCGTTAACTATTGATCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TTAACCACTGCATCCCCGTTGGGCAAAAACCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACGATTGGCGGGATAGGGAGTATTACAGGCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TAGATGCAACGGTTCTCCGCGTTTGTCCCCGCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ACATTGTTCGTTGGGCATTAAAGCGTGGTAGG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CGGGGTGATTCCGGTAAATTGGGAGGTGTCGA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GCCGGGGCATGGCACGAAGGCGTGAGATTAAA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TGAGGTAACTGTGCAGCTGCTAAATTGCACCA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTGCCTGATGCAGATCAACGTTGAGATCCCTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TTGCCCCGGAAGGCTTTCGCGCCGAAATAGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GAGGATGAGCGGCATGCAGCATACCAAGCCAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CTGTGGCGCACAATACGGCCTGTGCGTGGTTT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GAACAGGGGTATCGGTACGTCTATGCCGCTGA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTGCTGTAGTTTATACATTTTCGGCCCACAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CAGCCCACGAAACCGCGCTGGCCGAACATGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ACAACGCCCGTTTAACCAGTCCGGTTGATTTA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CGAGCGGTAAAAAAGGTGGGGCTGGCGGGGAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTTTCGCAGTATGCAGAACGTCGCCAGCGAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCGTTGCTGTAATAGGTGGTGTTGGCGGCGTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACCTGAGACAGCACCGGCAAATGAGCCCGCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCACACCTTGCCGCCTTGCGTCGCGGCCTGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTCTTGACCCGCGTGCCCCACACGCCGACCAC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TATTTTGGCTGGCGCGGCCTGAAAATTTGGTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	AATCGCTAAACCTTGCAAAAAACGGCTGGCAC
CCGTCCCCCGCATGCGCGGGGATGAACCG	CCGGTGTGTCGCGAGAGGACGCAGAGCAAGCG
CCGTTCCCCGCAGGCGCGGGGATGAAGCG

>NZ_CP015455|1|2|897273-897484|PILER-CR
	GCTGCTGGGCAAAAGGCTCTTCTGAATCGACA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTTCGCCGCGTCCACGGCCTCCGCATAGGT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	AGGTTCGAGTGGCAACAGCCCATTAAGTACAC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTGCCACTTTAGTGGGTATTCCGAAATAAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATAGCCAGTGATAAGACCATCATTGTCATCAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATATGATCTTCTTCGCCGTTAACTATTGATCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TTAACCACTGCATCCCCGTTGGGCAAAAACCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACGATTGGCGGGATAGGGAGTATTACAGGCC
CCGTTCCCCGCAGGCGCGGGGATGAACCGTAGATGCAACGGTTCTCCGCGTTTGTCCCCGCCCCGTTCCCCGCAGGCGCGGGGATGAACCGACATTGTTCGTTGGGCATTAAAGCGTGGTAGGCCGTTCCCCGCAGGCGCGGGGATGAACCGC	GGGGTGATTCCGGTAAATTGGGAGGTGTCGA
CCGTTCCCCGCAGGCGCGGGGATGAACCGG	CCGGGGCATGGCACGAAGGCGTGAGATTAAA
CCGTTCCCCGCAGGCGCGGGGATGAACCGT	GAGGTAACTGTGCAGCTGCTAAATTGCACCA
CCGTTCCCCGCAGGCGCGGGGATGAACCGGTGCCTGATGCAGATCAACGTTGAGATCCCTGCCGTTCCCCGCAGGCGCGGGGATGAACCGTTGCCCCGGAAGGCTTTCGCGCCGAAATAGCTCCGTTCCCCGCAGGCGCGGGGATGAACCG	GAGGATGAGCGGCATGCAGCATACCAAGCCAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CTGTGGCGCACAATACGGCCTGTGCGTGGTTT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GAACAGGGGTATCGGTACGTCTATGCCGCTGA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTGCTGTAGTTTATACATTTTCGGCCCACAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CAGCCCACGAAACCGCGCTGGCCGAACATGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ACAACGCCCGTTTAACCAGTCCGGTTGATTTA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CGAGCGGTAAAAAAGGTGGGGCTGGCGGGGAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTTTCGCAGTATGCAGAACGTCGCCAGCGAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCGTTGCTGTAATAGGTGGTGTTGGCGGCGTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACCTGAGACAGCACCGGCAAATGAGCCCGCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCACACCTTGCCGCCTTGCGTCGCGGCCTGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTCTTGACCCGCGTGCCCCACACGCCGACCAC


>NZ_CP015455|1|3|897578-898338|PILER-CR
	GCTGCTGGGCAAAAGGCTCTTCTGAATCGACA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTTCGCCGCGTCCACGGCCTCCGCATAGGT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	AGGTTCGAGTGGCAACAGCCCATTAAGTACAC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTTTGCCACTTTAGTGGGTATTCCGAAATAAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATAGCCAGTGATAAGACCATCATTGTCATCAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ATATGATCTTCTTCGCCGTTAACTATTGATCC
CCGTTCCCCGCAGGCGCGGGGATGAACCG	TTAACCACTGCATCCCCGTTGGGCAAAAACCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACGATTGGCGGGATAGGGAGTATTACAGGCC
CCGTTCCCCGCAGGCGCGGGGATGAACCGTAGATGCAACGGTTCTCCGCGTTTGTCCCCGCCCCGTTCCCCGCAGGCGCGGGGATGAACCGACATTGTTCGTTGGGCATTAAAGCGTGGTAGGCCGTTCCCCGCAGGCGCGGGGATGAACCGC	GGGGTGATTCCGGTAAATTGGGAGGTGTCGA
CCGTTCCCCGCAGGCGCGGGGATGAACCGG	CCGGGGCATGGCACGAAGGCGTGAGATTAAA
CCGTTCCCCGCAGGCGCGGGGATGAACCGT	GAGGTAACTGTGCAGCTGCTAAATTGCACCA
CCGTTCCCCGCAGGCGCGGGGATGAACCGGTGCCTGATGCAGATCAACGTTGAGATCCCTGCCGTTCCCCGCAGGCGCGGGGATGAACCGTTGCCCCGGAAGGCTTTCGCGCCGAAATAGCTCCGTTCCCCGCAGGCGCGGGGATGAACCG	GAGGATGAGCGGCATGCAGCATACCAAGCCAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CTGTGGCGCACAATACGGCCTGTGCGTGGTTT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GAACAGGGGTATCGGTACGTCTATGCCGCTGA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTGCTGTAGTTTATACATTTTCGGCCCACAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CAGCCCACGAAACCGCGCTGGCCGAACATGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	ACAACGCCCGTTTAACCAGTCCGGTTGATTTA
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CGAGCGGTAAAAAAGGTGGGGCTGGCGGGGAG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCTTTCGCAGTATGCAGAACGTCGCCAGCGAT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCGTTGCTGTAATAGGTGGTGTTGGCGGCGTG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CACCTGAGACAGCACCGGCAAATGAGCCCGCG
CCGTTCCCCGCAGGCGCGGGGATGAACCG	CCACACCTTGCCGCCTTGCGTCGCGGCCTGCT
CCGTTCCCCGCAGGCGCGGGGATGAACCG	GTCTTGACCCGCGTGCCCCACACGCCGACCAC
CCGTTCCCCGCAGGCGCGGGGATGAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015455.1\|WP_072287166.1\|891946_893068_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP015455.1\|WP_072287172.1\|896280_896589_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP015455.1\|WP_072287179.1\|904868_905366_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015455.1\|WP_072287174.1\|899669_900713_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP015455.1\|WP_072287170.1\|895035_895278_-\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl\|CDD\|223932
NZ_CP015455.1\|WP_072287180.1\|905555_906785_-\|OFA-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340911
NZ_CP015455.1\|WP_145928191.1\|890389_891391_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP015455.1\|WP_072287168.1\|893812_894712_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NZ_CP015455.1\|WP_072287181.1\|907256_908549_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|237359
NZ_CP015455.1\|WP_072287173.1\|899282_899567_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|224069
NZ_CP015455.1\|WP_072287169.1\|894739_895051_-\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|367091
NZ_CP015455.1\|WP_072287175.1\|901148_901766_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|372595
NZ_CP015455.1\|WP_072287177.1\|902740_903967_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_CP015455.1\|WP_083568948.1\|889799_890384_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP015455.1\|WP_072287165.1\|891387_891912_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP015455.1\|WP_072287171.1\|895379_896300_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP015455.1\|WP_072287178.1\|903959_904691_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP015455.1\|WP_072287176.1\|901986_902748_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP015455.1\|WP_072287167.1\|893078_893813_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP015455.1\|WP_145926413.1\|898566_898914_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP015455.1\|WP_072287166.1\|891946_893068_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.65079e-116
NZ_CP015455.1\|WP_072287172.1\|896280_896589_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	3.24539e-61
NZ_CP015455.1\|WP_072287181.1\|907256_908549_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|237359	PRK13352, PRK13352, phosphomethylpyrimidine synthase ThiC.	0
NZ_CP015455.1\|WP_072287174.1\|899669_900713_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	6.11148e-34
NZ_CP015455.1\|WP_072287170.1\|895035_895278_-\|ribbon-helix-helix-protein,-CopG-family	gnl\|CDD\|223932	COG0864, NikR, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain [Transcription].	8.76439e-06
NZ_CP015455.1\|WP_072287180.1\|905555_906785_-\|OFA-family-MFS-transporter	gnl\|CDD\|340911	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.30025e-98
NZ_CP015455.1\|WP_145928191.1\|890389_891391_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	9.97586e-39
NZ_CP015455.1\|WP_072287168.1\|893812_894712_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.48397e-44
NZ_CP015455.1\|WP_072287173.1\|899282_899567_+\|ferredoxin-family-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	1.17011e-07
NZ_CP015455.1\|WP_072287169.1\|894739_895051_-\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	3.92152e-28
NZ_CP015455.1\|WP_072287175.1\|901148_901766_-\|HAD-IA-family-hydrolase	gnl\|CDD\|372595	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase.	6.59759e-31
NZ_CP015455.1\|WP_072287177.1\|902740_903967_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_CP015455.1\|WP_083568948.1\|889799_890384_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	2.56012e-35
NZ_CP015455.1\|WP_072287165.1\|891387_891912_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.25003e-35
NZ_CP015455.1\|WP_072287171.1\|895379_896300_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.05969e-151
NZ_CP015455.1\|WP_072287178.1\|903959_904691_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	8.44212e-48
NZ_CP015455.1\|WP_072287176.1\|901986_902748_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	9.86641e-112
NZ_CP015455.1\|WP_072287167.1\|893078_893813_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.94773e-44

>NZ_CP015455.1|WP_072287172.1|896280_896589_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MLVIVVENAPPRLRGRLALWLLEVRAGVYVGKVSRRVREMIWDTVDKGIEEGNAVLAWSTNTESGFDFMTLGVNRRIPKEMDGVKLVSFLPETPSGIQNSGG
>NZ_CP015455.1|WP_072287171.1|895379_896300_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MEPVLPQLKPIPMKDRLSVLFVEKGHLDVLDGAFVLVDKTGVRTHIPVGGVACLMLEPGTRVSHAAVTLASRVGCLLVWVGEAGVRLYASGQPGGARADRLLYQAKLALDDAARLKVVRKMYEMRFKEKPPDRRSVEQLRGIEGARVRKMYELLARQYRVPWKNRNYDHTEWGSGDVPNRCLSSATACLYGICEAAILAAGYAPAVGFIHTGKPQSFVYDIADIFKFDTVVPIAFRIAAKKPFDAERQVRLACRDVFRQTKLLSRIIPAIEQVLKAGDLEVPKAHAEAVEVAIPNKEGIGNAGHRG
>NZ_CP015455.1|WP_072287170.1|895035_895278_-|ribbon-helix-helix-protein,-CopG-family
MPKTKVVITLDKKTLSEIDRLVAGHVFPSRSRVIEEALQEKLARMSHNRLARECTKLDPEFEKALAEEGASEELGEWPEY
>NZ_CP015455.1|WP_072287169.1|894739_895051_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MARILRGDIRWADLNPVRGSEQGGLRPVLIISQDIFNARSGTVIALAITSQPQRAGFPLTLELTSPALPKKSWVKISQIRTLAVERIGKKLAEASPEELARVV
>NZ_CP015455.1|WP_072287168.1|893812_894712_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYFSRVQLQPDVQRSSQLSHVLTTNSYGLHQLLWDLFPTEEKRTFLFREEIAKEQLKNQRCVKGESLFYLVSRHKPLNETPIFLVESKKYAPVINKGQQLTFKLRANPIVSRKTPDKKHSVRHDVVMDAQRRLLRELAYCLGFSDVEHLKKSVLRHHVFNAWRESENRSCSEILREVIRANERFESLLEANLTSAQLVDWALKAVSDSALESWLREKGARNGFELVHDESMNGRKRFKFQAEGYRWHAMPKKGRDAGFSSVDFDGELLVVDPELFQAMLFNGIGPAKAFGCGLMMVRRA
>NZ_CP015455.1|WP_072287167.1|893078_893813_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKHLVFRLYGPLSAWGEIAVGESRHSAVYPSKSALLGLLAAALGVRRDEEERQAELAAGYQFAVKVLRTGSLLRDYHTTQVPDSAGKLVYRTRREELIRGKARLGTILSSREYRCDTMALVAVRANETAPFSLDMVREKLLKPEFHLYLGRKSCPLAVPLDPVVRDWRSFGQALDEIELKSLMVDPADEQRWIPVDNQIRYYWEGEDNILKAQQILTRHDQPLSRVRWQFAQRAENLRIVKGDV
>NZ_CP015455.1|WP_072287166.1|891946_893068_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSRFIQLHLLTSYPPANLNRDDLGRPKTAKMGGVDRLRVSSQSLKRAWRTSDLFERAMKDHIGTRTKEMGRKVYARLLEKGIGHKDALAWAGAIAGVFGKLKKLTDNEKKALKDLPATKRREKELVEVEIEQLAFFDQGEELAVLELTNRIAERKEGPQPEELNLLRQKMTSVDIALFGRMLASSPAFNVDAACQVAHAISVHPVVIEDDYFTAVDDLNDGSEDAGAAHIGETGFAAGLFYSYICINHGLLVDNLGGDDNLAQRAIASLTEAAVKVPPNGKQNSFASRAYASYVLAEKGDQQPRALSVAFLKPIDNRTLCRDEQDFGTAAVQALETHRKNLDKVYGNCADEAYAINALTGEGTMADLLDFVIG
>NZ_CP015455.1|WP_072287165.1|891387_891912_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MNEQKFWTEEAQQKLRSWFSWLQENRGDRARMRRAETPDDVVLSEPFFNFLRQMPEVWALQQNLPIAAMIAAVLAHVKDNDGKKSFAAQLASTKPGTDRSRMSELRFQQLQKSRTPDEFFRRLIRAVKLADGQVNILSLADSIRRWMNEYRYGTSLKPFDRLAVRWANDYYVAK
>NZ_CP015455.1|WP_145928191.1|890389_891391_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MSAEDFDSVPGEKELLEKKYIFPWLTDTRLSPDKKPTVPTDGNPLQHYWPMPRRIRLFVEEIDGKCDLSGEPISKGIRKYKRIKDGVYYTGGWMHPLTPHFRKDRLSFASPVLGTHLADDYRDWSALTLNGKLGGDGDKSQCAKNVSAFIHERLEDLNDRGRLWCFGYVAKSADVKRWYDAVFPLLADERTASNMQAWAGELIEAAKVVSDLLRNQLKEAWFKRTKDVKGDMNAVVTEFWQQSEKDFYDLLKRLSDLPGEQRRAPPEIYAFWEQTIRNLALDLFDSWALESPAEDMDMKRIIGARKELEKNLRTSKVMKILREKSTTEKEGKE
>NZ_CP015455.1|WP_083568948.1|889799_890384_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLIEDAWLPVLREEGPDKIAPWQIVETTNPVLEITAPRPDFQGALYQFLIGLLQTCFAPEDHDEWLEYWDEMPTVDQLRGCFQKVSSAFELENPDGPAFMQDFNDFDGEELPIEDLIGGLLAIQRDQKIGICLLKEEQFQLFLLIGRQLHCSTYRRQVFWLGDNIELDFGEMVPLLHWFCPHIRTQLCGENYG
>NZ_CP015455.1|WP_145926413.1|898566_898914_+|hypothetical-protein
MPVYHGTVSDLDAFTFGRGGTVSGSPVGTLGVSVALDREVAEEFAKKSAQGGSRTGPKASGRKAKSQPDGVVLDLLHRAEKPALIDLTGGENDYDAIMRGNCTTPGGLLKGKSLS
>NZ_CP015455.1|WP_072287173.1|899282_899567_+|ferredoxin-family-protein
MFAYIEIDIQKCKGCGLCTIACPRDLIKLDENLDDDIFSVAVFLEGGHCYGCAFCASVCPDLAIKVCSLCKNEITGRMNKKFSCYRKIVENLSR
>NZ_CP015455.1|WP_072287174.1|899669_900713_-|glycosyltransferase-family-4-protein
MRILFLTPSQPHTTGNWVSALRQKKELENLGHCVRILEVTEDTAHLEAQANSFAPDIVNALHAYRSGVPWLTCPASQSIPLAVTLTGTDVHQGLDDPQQRPAILQVLARADAILTLCPATRQFLEHTYPALTSKLHHVPPAVDLGAEPFDLRKPWNIPDSAVLFLHPAGIRPVKGNLELLEMFDKVVDSQRCRLAFCGPVLDRDYASRFFSALQKRPWAVHVGEIPHTAMAAVMRQADVILNNSASEGFSNTLLEAGSLGIPILARNIPGNAAAFRPGLQGLVFDTAEQFIRQAIMLAQHPAMRQRFSQPLASSQSMQQEARQMASIFCALKVRRRATIVHPRMDTK
>NZ_CP015455.1|WP_072287175.1|901148_901766_-|HAD-IA-family-hydrolase
MVKGLIFDCDGVLFDSLHANVAFYSAALQQLGMPPIAHDDREKIYLCHTVTTPELFEAILGPERLEEALQVSRGIDYSRFIPLMVPEPGILEALSRLSARMPLAVATNRGGSMHDISRHFGLERFFKTILTSKDVARGKPHPDMLLLASDRLGIDPANLLFIGDMDVDQEAARRANIRFVGYRGRFAEAINITSHNQLFDLIEQL
>NZ_CP015455.1|WP_072287176.1|901986_902748_-|tryptophan-synthase-subunit-alpha
MLETTIRNKLAQQDILLMTHIVIGYPDLETSFEVVRTMVEAGVDLMELQIPFSEPMADGPVILKANQEALATGITVDQCFDFAEKVAATFDIPFLFMTYYNILFKYGVGAFAERMAKVGLCGAIVPDLPPEEADDYLSAMSKYGMAPIFIYAPNTSEARMRQIAEHGKGFIYCMARKGVTGLQTDFSGQLGTHLARCRASTQLPLALGFGVKDRADVEFIKGKADIAVVGSQAIRILDEGGVPAVNAFIASLR
>NZ_CP015455.1|WP_072287177.1|902740_903967_-|tryptophan-synthase-subunit-beta
MDKRGYFSGFGGCFIPEILNETFVELVKAYEAARADSAFWQEYLDVMSNYSCRPTPLTFAGNLTRHFGGARIYIKREDLNHTGAHKANNVMGQGLLVKRMGKTRVIAETGAGQHGVATATMAARMGFECTIYMGEEDVERQRPNVFWMERLGATVVPVTDGSRTLKDAINEAFRDWVSNMDTTHYVLGTACGPHPFPEMVAWFQSIIGTEARQQILKHEGRLPKRVYACVGGGSNAMGLFSGFMDDPVELVGVEAGGKGLDSGRHAARLSSRDASVGVAQGYKTYFLQDGDGQMKDTHSISAGLDYVGVSPILAHLQAIGRARFEAATDAEVLDAVTLTMRKEGLIPALESSHAFAQAFKEAPTLSKDDIIIINQSGRGDKDIFTVADAFDDPAWKEFIKHKAEQYHA
>NZ_CP015455.1|WP_072287178.1|903959_904691_-|GntR-family-transcriptional-regulator
MLNPDSPIPLYHQLAERLGDQIRNGELAPGQRIPSEPQLAARYGIGRPTVRQALDSLVRQGLLCRRRGSGTYVSEPAREIDLFSLDGTSAAFHKKGLAATTLIREAIRLQPIEDAPDNPFSGRTAYFFSRLTCLDGAPVLLEDLYLHPQLFAGIESLDLAGRSLSSVAAKHFMLRPMGGKQSFRIGYLDAVRARCLDVSVTTPLLQVERRLDFAAGRDGFFSRLFCRTDHIVFSQHMGASGHG
>NZ_CP015455.1|WP_072287179.1|904868_905366_-|hypothetical-protein
MKKWALAFLCCFLASGAFAAPQNFQLSLTPDVAIHSRSTRINGVSLGIWSQNPQNALALGIVNGSTGSSSGLSLGLLANYAENYKGAQLACIANYASGNVTGLQWAAFNYAGNLHGLQLGFVNFADNADKGVQIGLINIMNANKRWFGNLPNEVAPAMVFVNWRY
>NZ_CP015455.1|WP_072287180.1|905555_906785_-|OFA-family-MFS-transporter
MSNEKLESKRWFIALAGIVLQLILGTVYAWSVFKKPLMANHGWSETATQGTFMIIIAVLGLAAAFGGTLVDKKGPKLVAVIGAVCYAIGTLCAGLADLTGNIWVLYLGYGVIGGLGNGFGYVVPIACLIRWFPDKRGLVTGLAVMGFGAGAFFIGKIVPGMIVSMGVANTFFVLGVVYLVVSTAAALQFRDPPKGWTPEGFVQSTKTVSHADSFNFEQARRTPQWYMIWFMLFLNVSAGLGLLSQLSPMGQKILSLSIADPEQLAIKGGLILAIASIFNGLGRLFWASVSDKIGRKNVFLVMFASQALLYCYIPQITSATVFTIAACYLLACYGGGFAVMPSFAADSFGPGYIGKVYGIILTAWGAAGVAGPLVFAQVKGAPALYVAAALLVLGFIITWSYKPPVKATA
>NZ_CP015455.1|WP_072287181.1|907256_908549_-|phosphomethylpyrimidine-synthase-ThiC
MTQLEMARQGIVSDKMKQAAADAGIDAEILRQRIAEGTAIVCHNNRHANGRPLAVGKGLPTRINANIGTSKDDTSIDKELEKARVAMAAGADAIMDLSTGGPIDEIRRAIIAETDVCIGSVPLYQAACDTVVKKGKAIVDMTVDEIFDGIKKHLDDGVDFITVHCGVTRATVERMDREGRIMEVVSRGGSFTVAWMTRNNAENPLYEHYDRLLELVRPYDATLSLGDGFRPGCLADATDRAQIHELIVLGELTQRAWDAGIQVMIEGPGHVPLNQIEANIQLQKSLCHGAPFYVLGPLVTDIAPGYDHITCAIGGAIAASAGADFLCYVTPSEHLCLPTAKDVHDGVMATRIAAHAADIVKGLPGALEKDIAMSRARKALDWETQYGLAIDPELARKRRGESGVDEEHGACTMCGEFCAYRVMDERKKHR

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Crispr_ID: NZ_CP015455_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015455_2

1354332-1354440

Orphan

Consensus_repeat	Method
AGTTGCAAAAAGTTTTTAAGGTTTAACCCGTGTGCATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015455_2

>merge|NZ_CP015455|2|1354332-1354440|CRISPRCasFinder
AGTTGCAAAAAGTTTTTAAGGTTTAACCCGTGTGCATCATCATCTACTGAAGAAACCGGAGAAACGTCACCAGTTGCAAAAAGTTTTTAAGGTTTAACCCGTGTGCATC

>NZ_CP015455|2|2|1354332-1354440|CRISPRCasFinder
AGTTGCAAAAAGTTTTTAAGGTTTAACCCGTGTGCATC	ATCATCTACTGAAGAAACCGGAGAAACGTCACC
AGTTGCAAAAAGTTTTTAAGGTTTAACCCGTGTGCATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015455.1\|WP_145928195.1\|1361781_1362054_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340847
NZ_CP015455.1\|WP_072287504.1\|1349641_1351528_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|180120
NZ_CP015455.1\|WP_072287499.1\|1341837_1343175_+\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223936
NZ_CP015455.1\|WP_083558784.1\|1352179_1353043_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	unknown	unknown	gnl\|CDD\|238816
NZ_CP015455.1\|WP_072287509.1\|1356436_1357411_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_CP015455.1\|WP_158515871.1\|1362313_1362859_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340847
NZ_CP015455.1\|WP_072287498.1\|1341014_1341782_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226870
NZ_CP015455.1\|WP_072287502.1\|1346595_1348374_+\|anion-permease	unknown	unknown	gnl\|CDD\|238535
NZ_CP015455.1\|WP_083558783.1\|1343748_1344756_+\|NAD-dependent-epimerase	unknown	unknown	gnl\|CDD\|187563
NZ_CP015455.1\|WP_072287507.1\|1354962_1355382_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376187
NZ_CP015455.1\|WP_083558786.1\|1362874_1363240_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP015455.1\|WP_072287500.1\|1343285_1343663_+\|GxxExxY-protein	unknown	unknown	gnl\|CDD\|275083
NZ_CP015455.1\|WP_072287508.1\|1355374_1355788_+\|DUF86-domain-containing-protein	unknown	unknown	gnl\|CDD\|366864
NZ_CP015455.1\|WP_158514030.1\|1363287_1363491_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|379098
NZ_CP015455.1\|WP_072288165.1\|1338047_1340462_+\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|183173
NZ_CP015455.1\|WP_072287503.1\|1348570_1349476_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP015455.1\|WP_072287511.1\|1359075_1360590_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225153
NZ_CP015455.1\|WP_072287505.1\|1351805_1352183_+\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|183395
NZ_CP015455.1\|WP_072287512.1\|1360632_1361259_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100063
NZ_CP015455.1\|WP_072287510.1\|1358641_1358944_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382

Protein	Function_ID	Function_description	E-value
NZ_CP015455.1\|WP_145928195.1\|1361781_1362054_+\|glycosyltransferase	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	9.26022e-10
NZ_CP015455.1\|WP_072287504.1\|1349641_1351528_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|180120	PRK05506, PRK05506, bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Provisional.	0
NZ_CP015455.1\|WP_072287499.1\|1341837_1343175_+\|UDP-glucose/GDP-mannose-dehydrogenase-family-protein	gnl\|CDD\|223936	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NZ_CP015455.1\|WP_083558784.1\|1352179_1353043_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	gnl\|CDD\|238816	cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, is a bacterial member of the inositol monophosphatase family. It has been proposed that CysQ helps control intracellular levels of PAPS, which is an intermediate in cysteine biosynthesis (a principal route of sulfur assimilation).	5.59595e-122
NZ_CP015455.1\|WP_072287509.1\|1356436_1357411_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP015455.1\|WP_158515871.1\|1362313_1362859_+\|glycosyltransferase	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	1.69385e-55
NZ_CP015455.1\|WP_072287498.1\|1341014_1341782_+\|hypothetical-protein	gnl\|CDD\|226870	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	9.64876e-43
NZ_CP015455.1\|WP_072287502.1\|1346595_1348374_+\|anion-permease	gnl\|CDD\|238535	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.	1.63041e-42
NZ_CP015455.1\|WP_083558783.1\|1343748_1344756_+\|NAD-dependent-epimerase	gnl\|CDD\|187563	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs. This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP015455.1\|WP_072287507.1\|1354962_1355382_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	4.16789e-29
NZ_CP015455.1\|WP_083558786.1\|1362874_1363240_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.41792e-14
NZ_CP015455.1\|WP_072287500.1\|1343285_1343663_+\|GxxExxY-protein	gnl\|CDD\|275083	TIGR04256, conserved_hypothetical_protein, GxxExxY protein. Members of this protein family average about 130 residues in length and include an almost perfectly conserved motif GxxExxY. Members occur in a wide range of prokaryotes, including Proteobacteria, Perrucomicrobia, Cyanobacteria, Bacteriodetes, Archaea, etc.	1.47771e-51
NZ_CP015455.1\|WP_072287508.1\|1355374_1355788_+\|DUF86-domain-containing-protein	gnl\|CDD\|366864	pfam01934, DUF86, Protein of unknown function DUF86. The function of members of this family is unknown.	6.94958e-27
NZ_CP015455.1\|WP_158514030.1\|1363287_1363491_+\|IS3-family-transposase	gnl\|CDD\|379098	pfam13276, HTH_21, HTH-like domain. This domain contains a predicted helix-turn-helix suggesting a DNA-binding function.	0.000917404
NZ_CP015455.1\|WP_072288165.1\|1338047_1340462_+\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|183173	PRK11519, PRK11519, tyrosine-protein kinase Wzc.	2.99981e-110
NZ_CP015455.1\|WP_072287503.1\|1348570_1349476_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP015455.1\|WP_072287511.1\|1359075_1360590_+\|hypothetical-protein	gnl\|CDD\|225153	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only].	4.73901e-08
NZ_CP015455.1\|WP_072287505.1\|1351805_1352183_+\|four-helix-bundle-protein	gnl\|CDD\|183395	PRK12275, PRK12275, hypothetical protein; Reviewed.	1.24625e-46
NZ_CP015455.1\|WP_072287512.1\|1360632_1361259_+\|hypothetical-protein	gnl\|CDD\|100063	cd05825, LbH_wcaF_like, wcaF-like: This group is composed of the protein product of the E. coli wcaF gene and similar proteins. WcaF is part of the gene cluster responsible for the biosynthesis of the extracellular polysaccharide colanic acid. The wcaF protein is predicted to contain a left-handed parallel beta-helix (LbH) domain encoded by imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Many are trimeric in their active forms.	3.58779e-26
NZ_CP015455.1\|WP_072287510.1\|1358641_1358944_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	8.53195e-46

>NZ_CP015455.1|WP_083558784.1|1352179_1353043_+|3'(2'),5'-bisphosphate-nucleotidase-CysQ
MNKSNTNQTSDPSINGSQNSSVPFDFKPLASGLGPRALEQLCQIAKKAGTAILEVYNGEIAVETKSDNSPLTAADKASHQVIAAGLEALTPEIPILSEEGKDIPYQERKNWRRFWLVDPLDGTKEFIKRNGEFTVNIALIEGGAPVLGVVYVPVQDKLYVGVVGQGAYVQQADAQPEPIQVRTPDAQAGLTVVMSRSHPSPELAEYLKNIEVAEALPVGSSLKLCVVAEGRADLYPRLGPTMEWDTGAGQAVVVAAGGTVQTPDGAPLGYNKPSLLNPHFIVRGARA
>NZ_CP015455.1|WP_072287505.1|1351805_1352183_+|four-helix-bundle-protein
MRFEDLEVWKRGSRLSAEIYKELGQLRDFGFRDQITRAGLSIPSNIAEGFERESDRDCIKFLLYAKGSCGELRTQIYIGMEIDYISKKSGTAWVKETVEISCMLGGLINSKRSFLQKKENSGKNK
>NZ_CP015455.1|WP_072287504.1|1349641_1351528_+|sulfate-adenylyltransferase-subunit-CysN
MSHKSNLIAEDIHQYLKKQEEKSMLRFITCGSVDDGKSTLIGRLLWDSKLIFEDQLAALEADSKRVGTQGEDVDYALLLDGLQAEREQGITIDVAYRFFSTDKRKFIVADTPGHEQYTRNMVTGASTAEVAIILIDARKGVLTQTRRHSYLVSLVGIRHVVLAINKMDLVDYAASRFHSIREEYETFAAGLGFEDVTAIPISALKGDNVIEANGHTPWYQGPPLLEYLETVQVVDDAASRPFRMAVQWVNRPNLDFRGFSGTIASGTLRPGDEVVVPSSGQKSTVARIVTMDGDLSQAVAGQAVTLTLQDEIDISRGDLLSAPLARPIHTDQLRAHVVWMHEEPLLPGRGYLLKTGCTTVPAQISDLRRKVNVNTLQQEPGKTLGLNEVGVCNLSLGKAISFDPYKENRATGNFILIDRFSNATVGAGMIDFALRRADNIHWQALDINKQARAEQKGQKPRVLWFTGLSGSGKSTIANLVEKKLHSMGKHSYILDGDNVRHGLNRDLGFTDADRVENIRRVAETAKLFVDAGLIVLVSFISPFKSERQLARDLLEPGEFIEVYVNTPLAVCEQRDPKGLYKKARAGQLKNFTGIDSAYEAPEKPEIVVNGAEKSAEELAEEIVREVFG
>NZ_CP015455.1|WP_072287503.1|1348570_1349476_+|sulfate-adenylyltransferase-subunit-CysD
MKLNMTHLRQLEAESIHILREVAAEFQNPVMLYSIGKDSSVMLHLARKAFYPARPPFPLMHVDTTWKFREMIEFRDNLAAEYGFDLLIYTNEEGVRQGISPFTHGSALYTDVMKTEGLKQALDKYKFDAAFGGARRDEEKSRAKERIFSFRTATHRWDPKNQRPELWNLYNARVSPGESIRAFPLSNWTELDIWQYIYLESIPIVPLYYSKKRPVVQRDGMLIMLDDDRMQLKPGEKVEMKSVRFRTLGCYPLTGAVESTAATLPEIIQEMLLTRTSERQGRLIDHDQAGSMEKKKQEGYF
>NZ_CP015455.1|WP_072287502.1|1346595_1348374_+|anion-permease
MSAAAIFTLLIVVLMLAALAFEVLAPDIIVFSALGVLLVAGVLTPAEAFAGFANPGMLTVGLLFIVAYAAQSSGLLAFFADHVMGRSGGGRRSLARMMGPVAGMSAFLNNTPIVAMFTPAIRDWALKHRLSPSKFLLPLSYASIFGGICTLIGTSTNLVVNGILLQQGHRSLGMFELAWVGLPCAVAGIAFLLLVGLRLLPERCDLAQQMETGGGREYFIEMLVPESSALAGKSVEQAALRNLGQLFLVQIQRGDERLAPIRPSDVLHGGDHLLFTGNLDAILRLQGLAGLMPVHEDEFCRTLRESGNGRILEAVVSRSSPMLGKTIKQGNFRARYDAAILAVHRHGERLRSNLGEVVLRPGDTLLLLAGDDFSKRWNHSREFYMMTRVVDIPRVDRRKGLMTVGVTAAMVALAAFGILDILKAAILAVILLIWTRCITVVEARRSIELNVLIIIAAALGLSRALEKTGAAGLLADHLIDSLRGLGPMGLLAAIYLATSLITEMITNNAAAALMFPIAMAVAGRQGLDPMPFAVAIAVAASASFATPIGYQTNLMVYGPGGYRFSDFLKLGIPLNLLYMAVALVVIPAVWGF
>NZ_CP015455.1|WP_083558783.1|1343748_1344756_+|NAD-dependent-epimerase
MQKILVTGTAGFIGFHLAKVLLDRGDEVVGLDNLNDYYDVSLKQARLAQLDGRPNFRFVKLDLADRDGMAALFKTEKFDRVVNLAAQAGVRYSLKNPHAYIDSNLVGFVNILEGCRHNEVQHLVYASSSSVYGANTRMPFSIHHNVDHPVSLYAASKKANELMAHTYAHLYRLPVTGLRFFTVYGPWGRPDMALFLFTKAILEGRPIDVFNYGKMRRDFTYIDDIVEGVMRTLDNTARPNPQWNGDQPDPGTSNAPYRLYNIGNNNPVELMHLIETLEKALGRTAEKNLLPIQPGDVPATYADVDDLTRDVGFKPSTSIEEGVGRFVAWYRGYFR
>NZ_CP015455.1|WP_072287500.1|1343285_1343663_+|GxxExxY-protein
MQYDDITKLILQACFEVSNELGSGFLESVYEKSLLVALEDLGLNARAQVPIKVNFRNRVVGDYFADIMVNNQVLIELKAVKKLAPEHVAQVLNYLKASKIEAGLLVNFGNPRLEYRRFNNYSSPI
>NZ_CP015455.1|WP_072287499.1|1341837_1343175_+|UDP-glucose/GDP-mannose-dehydrogenase-family-protein
MNLTVIGTGYVGLVTGTCFAEMGNTVTCVDTDPAKVAQLGQGQIPIFEPGLDAMVKNNSKDGRLRFTTSLAEAMADSQIYFIAVGTPSNGDGSADLRQVLAVAREIGRHLNAYGVVVDKSTVPVGTAEKVREAIQGELQSRGVNIDFDVVSNPEFLKEGAAIDDFMRPDRIIVGSDSDRAREIMRQLYAPFNMNRDRTLYMGVRDAEMTKYAANAMLATKISFINEIAGLCDRLDVDVENVRLGIGSDARIGYSFIYPGCGYGGSCFPKDVKAIIHLAESCRFEPRLLRSVEERNQAQRRVLCQKVRERFGDDLSGLTFGVWGLAFKPGTDDLREAPAVVLLHELIGAGAKVRAYDPVAMDAARRQLPAAWFDNGDLVLCEHQYHALQDVDAMILVTEWKPFRTPDFHAMRKLMKQPVIFDGRNQYEPQTVKQAGFEYQGIGRKS
>NZ_CP015455.1|WP_072287498.1|1341014_1341782_+|hypothetical-protein
MIDWHCHLLPGLDDGSRNLDESLAMGRLLAEAGFTDIYCTPHCLHGAYDNTPRGVRHATSGLQQAFLEHGIPLTLHPGMEYYLDEIMLANLDALQPLGDTRLVLVEAAQQASPEFVKQALFQLLRRKWVPVMAHPERFPLFERSPARETPCGWLRRLWPLRKMSSLPVVPQTEPLTQTLANMGCLFQGNISSFAGWYGPDVTEQARLHLAGGLYDYFGTDAHNPKGLKKTLAAGLDAIAALQAENCRGDGILAKG
>NZ_CP015455.1|WP_072288165.1|1338047_1340462_+|polysaccharide-biosynthesis-tyrosine-autokinase
MENPNPYNGYTYIDEEEVHLQDYINVLFRRRKSVVFAFCAIFLSVALYTFLVSPLFEAKATLHVRDEKVNGNGLLDDLGLSRENPIETEVEILRSRTNIEEVVKRLHLDWQIDKQSDEMDFAVREFASTAENPHYVVRLLDAGRYRVADADGNAVGIGQAGHLFSAGGLRLLIDNLRGHEGQEFELSLRPFNQVVLGLREAIKASEVGKGTNIIQVSYRHTDPELASEVVNALSSVYLERNILLKSEEANKSVEFIDKQLQSVRENLDTAEEQLAAYKSTSGVVEMGTEATSLIGLLTGQEKELASVELLRRQAQFAVASLKTAMAQKKSYVPAVLMDDPVVSSMAEKLATLEVEKRRLLVDLTEMHPDVRAVQGQIMQIQDKLLSTYQQLLSGLSKQSDTVRGDLQRYEARVRQLPAAERDLARLTRRSTVNAEIYTFLLQKHEEARLARAATIGNVNIIDPAIVPDRPVKPQKAKNLLLGLIVGCMAGIGLAFLLEYLDDSIKDGELAKREVGVPLLSVIPYIGLDRKGKDRQALVDGNSSRRVLIAQFKPKSAAAEAFRSLRTSLHFSSLGRDKKVLLVTSAFPSEGKTTISGNLAVTLAQTGNRVLLVGCDLRKPTLQEMFGDHHAVGLTEVLVGDAKVEEAIKPTGLFQLDFLPSGAVPPNPAELLESQRMKNLVRELRDQYDVILLDAPPVLAVTDATILTSLAEQVVWVLQVGGVSIKAARRVKEIMDNIKAPLIGFVLNDKNQEGQGYYGGYSRYGSYGRYGYGYGYGYGYYQQDKMTAKPGVVGRLLGRWTGKEG
>NZ_CP015455.1|WP_072287507.1|1354962_1355382_+|nucleotidyltransferase-domain-containing-protein
MPENSAQIDTIAAFLRRQATVRFAYLFGSRARGDAGRLSDIDIAVFLDPGLDLFTCRLQLMEQLAVTLHSDRFDLVVLNDAPTTLRYEVIRDGRVLKEDKPLRVDFETGVLRGYLDTAPLRKTQQAYLRQQLAGERNHG
>NZ_CP015455.1|WP_072287508.1|1355374_1355788_+|DUF86-domain-containing-protein
MVNKNVLAARLDRLREYLDMLKAIQAYTLTDFIKDPFVYCAAERYLHLAIECLLDIGNHVISDRGYIKPDSYADVFRILGDNEVIPAPLCRELEGMASFRNLLVHDYLRLDRQKVYQIIQGKVKSLEQLAAVFAELF
>NZ_CP015455.1|WP_072287509.1|1356436_1357411_+|UDP-glucose-4-epimerase-GalE
MNILVCGGAGYIGSHMVKMLTEAGHHTTTFDNLSTGHRLAVQWGELVIGDLLDEAALRGLFAERRFDAVMHFSAKSLVGESVAQPAAYYRNNVIGTFNLLEAMRAAGVSCFVFSSSAATFGNPVAGRIDEQHPQAPINPYGETKLIVERMLRDYAAAYGLRSVSLRYFNAAGADPAGHIGEAHDPETHLIPNVLKAALDPAKQLKVFGQDYATPDGTCVRDYIHINDLCQAHLLALGHMEHHQGAHGFNLGNGQGFSILEIIRAAEQVTGQKIPYQACERRPGDPPTLVADATRARQQLGWQPQYTEITEILRTAWHWHRKQLY
>NZ_CP015455.1|WP_072287510.1|1358641_1358944_+|IS30-family-transposase
MRQTLTLDNGSEFANFKELEKKTQLKVYFADPYAAWQRGANENSNGLLRQYFPKGTDFRKIEEDAVADAVKRLNNRPRKCLGYRTPHEVFWPMARGALAN
>NZ_CP015455.1|WP_072287511.1|1359075_1360590_+|hypothetical-protein
MSTKRKTIVFAFLQYAQLALTMAYGVFLLPVYIKYLNADMYGAWLASGNIVSWLQIIVPDCGQVLMQRLGDAYARKDIPRFSGMATTGNLVTLTLGLVIVLFAWLVGNHLDILLKLPSSVDAQKLGTAFVLTAIGTGMIVYTQAYSSANLALQATGYYGVINLAASFIRILVIIYGLFVAKQGVLTLGMGNLIYGACLLLGHSGVYLKVCFRKKISIVAKPTSLKELASLFSFSTFARIGETFARNVDYFLVARFFGPEVTTSLKLIKSVPEAILPFIRTTTHSILPPLIQQIANGRIKQNKSILMEFTGKLLMFCCFVLGGISVLNKAFIGLWIPGSQFLFGYISFLIIAGLVLASASDVFRSYVMAAGCINDVSLIIGISSLVQALCLYVMTWQFGLIGLAVIPLCIYIATISLFIIRFKKELQLQWSDFKGVAADVTVGSFLALLAGLTIIKMPADTWGAFFKSVVIYIGMFLLLGLLGSRDLRRLSRRVWRKMPLAGSKV
>NZ_CP015455.1|WP_072287512.1|1360632_1361259_+|hypothetical-protein
MDIENIEIVSYDSSIVSRSKLHFLIGLGPRIKKYVYYTLVRAIARHRGAKIGKCTVLPYALAKKANANLIIGDHCCISSPDLDIRAPLTIGNFVIIGHGACIINASHNVDSPYFETTYNSLTIEDYCWVINCTVLPGVSKIGRGAVCGTGAVVVRDVSEMAVVGGNPAKVIRRRACVHDQYPPEALAAGDLLIYLNKWIGNVRKKRKA
>NZ_CP015455.1|WP_145928195.1|1361781_1362054_+|glycosyltransferase
MKKIAFLVPTLRFGGGERVAINLINGISDLECYEVSVIVYDSQIDYDLNLGIEVISLNEKTDLKNKISRFCSFFRKSIKVDKILKKKKLI
>NZ_CP015455.1|WP_158515871.1|1362313_1362859_+|glycosyltransferase
MSEEKLNCDLGKYIVGVGRLHRQKGFDLLIKAFSLVGDHELKLVLVGEGEEKKKLYNLCVELGVEDRVLFKGFSRNPYKYMRNAKCFVLSSRWEGFGLVLAEALASKTKVVAFNCKSGPSEILDNGKYGILVEPGNVNQLSKCIAKLIYEDTSITILDNENAVSRFDMYKVVGQYAKLLIS
>NZ_CP015455.1|WP_083558786.1|1362874_1363240_+|transposase
MYLTFPRDCGQSEKLQQQHQEDWHVSKRRRYTREFKIRTVRLITDSDQSVSEVVRDLEIHPNTFYKWIHQYGENPKEAFSGRGRQVSEADELSRLRRENQRLKMERDILKKAMAIFSKDPK
>NZ_CP015455.1|WP_158514030.1|1363287_1363491_+|IS3-family-transposase
MCDVLSVSRSGYYAWLRRPGPKRPQANAKLREKIRTVHHDSGEAYGSPRVYQALKKQGEPCSLTRCP

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Crispr_ID: NZ_CP015455_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015455_3

1380520-1380617

Orphan

Consensus_repeat	Method
CAAAATCAAAGCAAAAATTAAAGAAGTGATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015455_3

>merge|NZ_CP015455|3|1380520-1380617|CRISPRCasFinder
CAAAATCAAAGCAAAAATTAAAGAAGTGATTAGTAATTAGTGATTAGTGATTGGTTTAAAAAACAAACAAAATCAAAGCAAAAATTAAAGCAGTGATT

>NZ_CP015455|3|3|1380520-1380617|CRISPRCasFinder
CAAAATCAAAGCAAAAATTAAAGAAGTGATT	AGTAATTAGTGATTAGTGATTGGTTTAAAAAACAAA
CAAAATCAAAGCAAAAATTAAAGCAGTGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015455.1\|WP_072287522.1\|1372928_1373294_+\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|319869
NZ_CP015455.1\|WP_072287528.1\|1378963_1380469_+\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273648
NZ_CP015455.1\|WP_072287526.1\|1377386_1378454_+\|GDP-L-fucose-synthase	unknown	unknown	gnl\|CDD\|187550
NZ_CP015455.1\|WP_145926436.1\|1375596_1376738_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP015455.1\|WP_072287530.1\|1381170_1382520_+\|phosphomannomutase	unknown	unknown	gnl\|CDD\|185312
NZ_CP015455.1\|WP_072287534.1\|1384866_1385094_+\|CopG-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227054
NZ_CP015455.1\|WP_083558788.1\|1371150_1371987_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP015455.1\|WP_072287529.1\|1380667_1381027_-\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|319869
NZ_CP015455.1\|WP_083558787.1\|1368760_1368886_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015455.1\|WP_072287537.1\|1385894_1386167_-\|prevent-host-death-protein	unknown	unknown	unknown
NZ_CP015455.1\|WP_072287538.1\|1386437_1386659_+\|addiction-module-protein	unknown	unknown	gnl\|CDD\|378247
NZ_CP015455.1\|WP_072287531.1\|1382540_1383449_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226297
NZ_CP015455.1\|WP_072287533.1\|1384399_1384645_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|170091
NZ_CP015455.1\|WP_072287524.1\|1374889_1375276_+\|GxxExxY-protein	unknown	unknown	gnl\|CDD\|275083
NZ_CP015455.1\|WP_072287535.1\|1385077_1385344_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP015455.1\|WP_072287519.1\|1369140_1370424_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340848
NZ_CP015455.1\|WP_072287521.1\|1371989_1372829_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_CP015455.1\|WP_072287523.1\|1373425_1374604_+\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
NZ_CP015455.1\|WP_072287532.1\|1384119_1384410_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP015455.1\|WP_072287536.1\|1385598_1385898_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368240

Protein	Function_ID	Function_description	E-value
NZ_CP015455.1\|WP_072287522.1\|1372928_1373294_+\|four-helix-bundle-protein	gnl\|CDD\|319869	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins. A family of functionally uncharacterized bacterial proteins, some of which are encoded by an atypically large intervening sequence present within some 23S rRNA genes. The distantly related bAvd protein, which also forms a homopentamer of four-helix bundles, has been suggested to interact with nucleic acids and a reverse transcriptase.	3.58994e-52
NZ_CP015455.1\|WP_072287528.1\|1378963_1380469_+\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	gnl\|CDD\|273648	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NZ_CP015455.1\|WP_072287526.1\|1377386_1378454_+\|GDP-L-fucose-synthase	gnl\|CDD\|187550	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs. GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.20135e-173
NZ_CP015455.1\|WP_145926436.1\|1375596_1376738_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.12412e-74
NZ_CP015455.1\|WP_072287530.1\|1381170_1382520_+\|phosphomannomutase	gnl\|CDD\|185312	PRK15414, PRK15414, phosphomannomutase.	0
NZ_CP015455.1\|WP_072287534.1\|1384866_1385094_+\|CopG-family-transcriptional-regulator	gnl\|CDD\|227054	COG4710, COG4710, Predicted DNA-binding protein with an HTH domain [General function prediction only].	6.32566e-23
NZ_CP015455.1\|WP_083558788.1\|1371150_1371987_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	1.25739e-73
NZ_CP015455.1\|WP_072287529.1\|1380667_1381027_-\|four-helix-bundle-protein	gnl\|CDD\|319869	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins. A family of functionally uncharacterized bacterial proteins, some of which are encoded by an atypically large intervening sequence present within some 23S rRNA genes. The distantly related bAvd protein, which also forms a homopentamer of four-helix bundles, has been suggested to interact with nucleic acids and a reverse transcriptase.	1.65732e-50
NZ_CP015455.1\|WP_072287538.1\|1386437_1386659_+\|addiction-module-protein	gnl\|CDD\|378247	pfam09720, Unstab_antitox, Putative addiction module component. This entry defines several short bacterial proteins, typically about 75 amino acids long, which are always found as part of a pair (at least) of small genes. The other protein in the pair always belongs to a family of plasmid stabilisation proteins (IPR007712). It is likely that this protein and its partner comprise some form of addiction module - a pair of genes consisting of a stable toxin and an unstable antitoxin which mediate programmed cell death - although these gene-pairs are usually found on the bacterial main chromosome.	1.06321e-06
NZ_CP015455.1\|WP_072287531.1\|1382540_1383449_+\|hypothetical-protein	gnl\|CDD\|226297	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane].	3.6149e-15
NZ_CP015455.1\|WP_072287533.1\|1384399_1384645_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|170091	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN.	1.37387e-12
NZ_CP015455.1\|WP_072287524.1\|1374889_1375276_+\|GxxExxY-protein	gnl\|CDD\|275083	TIGR04256, conserved_hypothetical_protein, GxxExxY protein. Members of this protein family average about 130 residues in length and include an almost perfectly conserved motif GxxExxY. Members occur in a wide range of prokaryotes, including Proteobacteria, Perrucomicrobia, Cyanobacteria, Bacteriodetes, Archaea, etc.	8.28151e-54
NZ_CP015455.1\|WP_072287535.1\|1385077_1385344_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	5.18427e-19
NZ_CP015455.1\|WP_072287519.1\|1369140_1370424_+\|glycosyltransferase	gnl\|CDD\|340848	cd03821, GT4_Bme6-like, Brucella melitensis Bme6 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.	1.61501e-87
NZ_CP015455.1\|WP_072287521.1\|1371989_1372829_+\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	5.46657e-82
NZ_CP015455.1\|WP_072287523.1\|1373425_1374604_+\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_CP015455.1\|WP_072287532.1\|1384119_1384410_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	4.73286e-19
NZ_CP015455.1\|WP_072287536.1\|1385598_1385898_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	2.24306e-12

>NZ_CP015455.1|WP_072287528.1|1378963_1380469_+|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase
MIVPVIMSGGAGTRLWPLSRELYPKQLLPLVNDCTMLQETQLRLNGLQNLAEPLVVCNESHRFMVAEQMRQAGCPAGAILLEPVGRNTAPAVAVAALQAQRAGADPVLLVLPADHVIVDAETFRGAVVAGAELARDGKLVTFGIVPTKAETGYGYIRAAERLGCNRSAEGRVTSAEEYQSPAVKELHSALSTQHPALTGYTVASFVEKPDLPTAESYLASGDYYWNSGMFMFRASRYLEELETFAPQMLDCCREALEKAQRDLDFVRLDAEAFGACPKDSIDYAVMEKTAEAVVIPLDAGWSDVGSWSALWEVGQADGAGNVMRGDVLTHDSRNCYLHSSGRMVAAVGLEDHVVVETADAVLVARRDRAQDVKAIVEQLKAQGRGEALLHRRVNRPWGSYESIDHSERFQVKRITVNPGASLSLQMHHHRAEHWIVVKGTARITRGDDTLVISENQSTYIPLGVKHRLENPGLIPLELIEVQSGAYLGEDDIVRFEDKYGR
>NZ_CP015455.1|WP_072287526.1|1377386_1378454_+|GDP-L-fucose-synthase
MDLNGKIFVAGHRGLVGSAIVRQLQNAGYTNLITRTHTELDLTDQLAVADFFGKEKPDYVFLAAAKVGGIIANNTYRADFIYENLAIQNNVIHQSYLHGVKKLLFLGSTCIYPRECPQPMKEESLLTSPLEYTNEPYAIAKIAGIKLCESYNLQYGTNFISVMPTNLYGPGDNFDLEKSHVLPAMVRKMHLAKLMESGDLQAVVADLQVPNEDEALAILGKFGVSSTSVQIWGTGKPRREFLWSEDMAAACVYLMQERDFADTYAPGSKEVRNTHINIGTGEDVSIAELAELVRQTVGFGGELVFDASKPDGTLRKLTDVSKLHALGWRHQVDLGEGVQKLYSWYLNNDQMRRGV
>NZ_CP015455.1|WP_145926436.1|1375596_1376738_+|IS3-family-transposase
MPSKYSPEFKQDAVKLAVDSDQPISQTARALGVNPNTLYTWVAKYHQPQTVDEEGAGDKHPYEELKRLRREIAQLKEERDILKKGGGVLCKEQSVKYAWMRQQTEFGVQAMCRVLQVSRSGYYESLSRAPSNRSLADDALRPQIKGVFEKGRKTYGTRRIKDDLDKQGTVISRRRIARLMQEEGLAVKTKRKFKPTTNSKHDKPIAPNLLEREFNVETPDTAYVGDITYIPTREGWLYLAVVIDLFSRAVVGWAMGSRINAALVNDALRMAIWKRKPARGLIFHSDRGSQYASESHRKIHLTHGILASMSKKGDCWDNAVAESFFHTLKTELVHHCDYESRVEARASIFEYIEVFYNRQRRHSANGNEAPLVFEAMKKAA
>NZ_CP015455.1|WP_072287524.1|1374889_1375276_+|GxxExxY-protein
MDFKAITSKIIGAAIAVHRELGPGLLESVYQTCLAIQLQEEGLHVRTEVPVSVMYCGRTITEHGFRVDILVEDQIVIELKSVEKVQPVYIKQLLTYLRLADKPLGLLINFNESLVKNGITRVANGVDI
>NZ_CP015455.1|WP_072287523.1|1373425_1374604_+|GDP-mannose-4,6-dehydratase
MKKTALITGITGQDGAYLAEFLLKKGYIVHGIKRRTSLFNTDRIDHLYQDPHIENRNFILHYGDLTDSTNLIRIIQLVQPDEIYNLAAMSHVAVSFETPEYTANADGIGTLRILEAIRILGLEKKTRFYQASTSELYGLVQETPQKETTPFYPRSPYAVAKLYGYWITVNYREAYGIYACNGILFNHESPLRGETFVTRKITRAVARIALGLQDCLHLGNMNSLRDWGHARDYVEMQWLMLQQDKPEDYVIATGVQYSVRDFVNAAANELGITLRWEGEGVDEIGIVESVKSGSEPGRSKELGVRCEGDNPSPLTSHPSPGDIIVRVDPRYFRPTEVETLLGDPTKAKEKLGWTPRTSFEELVAEMVRGDFEEAQKDELCRRHGFNTFNYHE
>NZ_CP015455.1|WP_072287522.1|1372928_1373294_+|four-helix-bundle-protein
MRNHKDLEVWKKAIELATDCYRVTNGFPIDEKYGLTSQMRRAAVSIASNIAEGAARTSQKEFLQFLSFAAGSASELNTQILISRRIGIGDAADLDDLEEKTNLASRMLQGLIRSIRNKTCD
>NZ_CP015455.1|WP_072287521.1|1371989_1372829_+|glycosyltransferase
MSLISIVTGTYNAASTLRGNLDCLNNQSLQPEHILVDGCSTDGTLDILKKDSSPKRRYISEPDKGIYDAMNKGICLATGDVIGILNADDFYAGPSVLSKVAKAFEDPEVDACYGDLVYVRETQVISDSLLVIGETSLKKKSPITDHQSPAFKILRYWKSGSFSPEKFKWGWMPPHPTFFVRRSVYERFGLFNLDLGSAADYELMLRFLLRHRINVKYIPEVLVYMRVGGASNESIKARIKANRNDRKAWEVNGLKPYPWTLWMKPLRKIPQYFLRPPKA
>NZ_CP015455.1|WP_083558788.1|1371150_1371987_+|glycosyltransferase-family-2-protein
MTIPVSVLILTLDEEINLPRCLASLQWCDDVVVLDSGSQDATQNIATEWGARMVERPFDNYARQRNFGLEKIPYKHPWVLMVDADEEVPSELVEEMNKTIAGCCEKTTLYRMRRKDFFLGRWIKRSSGYPTWFGRLIKVGHVRVERAINEEYNTDGYIGFLQGHLHHYPFNKGFSAWLEKHNRYSTMEADLMVKGGIDTPALSDLFGSDPANRRRAIKSLVYRMPFRPLLMFVALYVFRGGFLDGRAGLSFCLLRSFYEFMINCKAQEVHLRQNDMPL
>NZ_CP015455.1|WP_072287519.1|1369140_1370424_+|glycosyltransferase
MLVKHIIPSLSASSGGPARSVPLLCVALAEYANIDILTVFSSDEVVIPDSVSVHSFLGSYSRLPIGCSIALREHLMRINFDVINAHGLWLMSTHYAVKSASKLNKPIVISPRGMLEPGALQFSRWKKQLAGWLWQNRDLQRSTCIHVTSPMEADNCRKYGLKNPIAVVPNGIDLDEYSLKGSLFPKDGREAGKESVLTSLKTSTIQKRKLLFLSRIHPKKGLTYLLEAWAQLKPFHDEWQLVIAGNDDGGHEAALKRLASKLKLRWIESFNQSTDNRNFTSKNNTLESDINVEEALIVFAGPLFGDEKVKAYQDADLFVLPTLSENFGMVVPEALACGTPVITTKGAPWHELTETESGWWIEVGTEPLRACLHEALAKSTVELNEMGLRGRKLVEDNYSIASVAKQMMQVYEWCLTQKNPPKYMSFF
>NZ_CP015455.1|WP_083558787.1|1368760_1368886_-|hypothetical-protein
MNASHLKRLKEMEHELSQLKRMYANIALGNQAMKDLFEKKF
>NZ_CP015455.1|WP_072287529.1|1380667_1381027_-|four-helix-bundle-protein
MKHHKQLEVWKRSVALAGAIYSATRDFPPEEKYGLTSQMCRAAVSIPSNIAEGAARHTVKEFIHFLHISSGSASELDTQIEIARLINMGNQKSLLEAQQELSQISRMLKGLIRSLEKSR
>NZ_CP015455.1|WP_072287530.1|1381170_1382520_+|phosphomannomutase
MTILPCFKAYDIRGRLPDELNEDIAYRIGRAYAAYLRPGRVVVGRDVRLGSAALCDALAAGLMDGGAEVFDIGLCGTEEIYFATFAEDMDGGIMVTASHNPMDYNGMKLVRQGARPISGDSGLQTIRELAQGNQFTPVAKSGTRVALETRPRYIEHLLGYIDRQQLRPLKVVVNAGNGCAGPVLDQLERHLPFEFIKVHHEPDGSFPNGIPNPLLPENRSATAEAVVAHGADLGIAWDGDFDRCFLFDEQGSFIEGYYVVGLLAAAFLQHHPGARIIHDPRLTWNTMDLVGELGGTPVMSKTGHAFIKERMRQEDAVYGGEMSAHHYFRDFAYCDSGMIPWLLVTELMSRNGQPLSRLVGARIARYPASGEINRRLSDPAATLARIETHYRCCARGADYTDGLSMEFDRWRFNLRCSNTEPVVRLNVESRGDQMLMEQKTQEILAMMEG
>NZ_CP015455.1|WP_072287531.1|1382540_1383449_+|hypothetical-protein
MNDVKMLHGWLPKIIHQTYRDHQLPSWYEQNIARIRELCPGWEYRFYDNQDIQNYISRNFPDYLGYYNRIDKAYGAARADFFRYLVLYNEGGVYLDIKSSITKPLDEVLPRDAVYLLSHWQNGPGEKYEDCGLFPALQKEPEPWPDRGEFQQWFIVAPPRHPFLQRTIERVCENIDKYRYFTGATGGMGVLRLTGPIAYTRAILSLMDTVEHSIVDAETDLGFRYTILPGMKSHRACSGYKHYSKQKIPIVKPEGAMIIFGFLGRPLACVTSTFKRIRKSITKRANKLINKSGTMFRLPNWH
>NZ_CP015455.1|WP_072287532.1|1384119_1384410_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSYSLEFKGSALKEWKKLDGGIREQFKKKLAERLGRPHVEAARLKGIPDCYKIKLKNAGYRLVYQVDDNRVVVIVVAVGKRENLSVYKTAGRRVKD
>NZ_CP015455.1|WP_072287533.1|1384399_1384645_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MERLYARASVSISDLKKNPSRIINEAEGTPVAILNHNKPSAYLVPAKAFEALMEQLEDYELSRLVKEREKESTIPVSLDEL
>NZ_CP015455.1|WP_072287534.1|1384866_1385094_+|CopG-family-transcriptional-regulator
MATSIRLDPEVEERLNFLATQTGRTKAFYLRELITRGMEDLEDYYLAADVLERVRKGEEEVLSSSDVRRSLELDD
>NZ_CP015455.1|WP_072287535.1|1385077_1385344_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSWTIEYTRTAETQLRKLDRPVARHILNYMDDKIAPLENPRTRGKALSGPLGELWRYRIGDYRVLCEIQDSIMRILVVEAGHRRQIYK
>NZ_CP015455.1|WP_072287536.1|1385598_1385898_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRYQLRYTQAAKDDLVRLYSFLIKQDIAAARKALTAIQKGTEFLKDFPFTCRKASTEDPLLREMIIPFGSKGYVLLFEIENAETVTILTVRHQREEDYH
>NZ_CP015455.1|WP_072287537.1|1385894_1386167_-|prevent-host-death-protein
MKTSTIPAIRVEPELRQAAEKILHEGETLSSFMVESLRAGILHRKAQQEFLVRGLAARDEAKQTGVFHSAETVLDELENMLTHAEQQNAK
>NZ_CP015455.1|WP_072287538.1|1386437_1386659_+|addiction-module-protein
MPTAKELVQEIEKLSPAERVRLIDKVVRDTIRPDVEIEGVWVKEVEARWKAFESGEIATVSYEFVMDKYRNQR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP015455_1	1.4\|896874\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896874-896905	32	MH572453	Microviridae sp. isolate SD_MC_65, complete genome	449-480	5	0.844
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NC_007713	Sodalis glossinidius str. 'morsitans' plasmid pSG1, complete sequence	5460-5491	5	0.844
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_LN854558	Sodalis glossinidius str. 'morsitans' isolate B4 plasmid pSG1, complete sequence	5471-5502	5	0.844
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NC_007182	Sodalis glossinidius pSG1 plasmid from Glossina austeni	59432-59463	5	0.844
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NC_007183	Sodalis glossinidius pSG1 plasmid from Glossina palpalis palpalis	59432-59463	5	0.844
NZ_CP015455_1	1.4\|896874\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896874-896905	32	MH572514	Microviridae sp. isolate SD_HF_40, complete genome	449-480	6	0.812
NZ_CP015455_1	1.2\|896752\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896752-896783	32	NC_008243	Chelativorans sp. BNC1 plasmid 2, complete sequence	126879-126910	7	0.781
NZ_CP015455_1	1.2\|896752\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896752-896783	32	NZ_AP022849	Bosea sp. ANAM02 plasmid pANAM02, complete sequence	365285-365316	7	0.781
NZ_CP015455_1	1.4\|896874\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896874-896905	32	KC131021	Marine gokushovirus isolate GOM, complete genome	449-480	7	0.781
NZ_CP015455_1	1.8\|897118\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	897118-897149	32	NC_027204	Sinorhizobium phage phiM12, complete genome	4963-4994	7	0.781
NZ_CP015455_1	1.8\|897118\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	897118-897149	32	KR052481	Sinorhizobium phage phiM19, complete genome	2612-2643	7	0.781
NZ_CP015455_1	1.8\|897118\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	897118-897149	32	KR052480	Sinorhizobium phage phiM7, complete genome	2356-2387	7	0.781
NZ_CP015455_1	1.27\|898278\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898278-898309	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	666437-666468	7	0.781
NZ_CP015455_1	1.31\|897303\|31\|NZ_CP015455\|PILER-CR	897303-897333	31	NZ_CP042167	Burkholderia contaminans strain ZCC plasmid unnamed1, complete sequence	117346-117376	7	0.774
NZ_CP015455_1	1.31\|897303\|31\|NZ_CP015455\|PILER-CR	897303-897333	31	NZ_CP028810	Burkholderia contaminans strain SK875 plasmid p875, complete sequence	84392-84422	7	0.774
NZ_CP015455_1	1.31\|897303\|31\|NZ_CP015455\|PILER-CR	897303-897333	31	NZ_CP046610	Burkholderia contaminans strain XL73 plasmid unnamed1, complete sequence	34215-34245	7	0.774
NZ_CP015455_1	1.31\|897303\|31\|NZ_CP015455\|PILER-CR	897303-897333	31	NC_008545	Burkholderia cenocepacia HI2424 plasmid unnamed1, complete sequence	14394-14424	7	0.774
NZ_CP015455_1	1.4\|896874\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896874-896905	32	MH572402	Microviridae sp. isolate SD_SF_47, complete genome	449-480	8	0.75
NZ_CP015455_1	1.8\|897118\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	897118-897149	32	NZ_CP046917	Paraburkholderia sp. DHF22 plasmid p1, complete sequence	79582-79613	8	0.75
NZ_CP015455_1	1.17\|897668\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897668-897699	32	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	140695-140726	8	0.75
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_CP045385	Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence	483786-483817	8	0.75
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	594169-594200	8	0.75
NZ_CP015455_1	1.26\|898217\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898217-898248	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	993918-993949	8	0.75
NZ_CP015455_1	1.26\|898217\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898217-898248	32	NC_015951	Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence	145013-145044	8	0.75
NZ_CP015455_1	1.27\|898278\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898278-898309	32	NC_011758	Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence	321504-321535	8	0.75
NZ_CP015455_1	1.2\|896752\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896752-896783	32	JQ807251	Environmental Halophage eHP-32, partial genome	22430-22461	9	0.719
NZ_CP015455_1	1.6\|896996\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896996-897027	32	MK448586	Streptococcus satellite phage Javan627, complete genome	10906-10937	9	0.719
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	898866-898897	9	0.719
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	245150-245181	9	0.719
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_CP040761	Paracoccus sp. 2251 plasmid unnamed5, complete sequence	211336-211367	9	0.719
NZ_CP015455_1	1.21\|897912\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897912-897943	32	MN694017	Marine virus AFVG_250M1107, complete genome	28177-28208	9	0.719
NZ_CP015455_1	1.23\|898034\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898034-898065	32	NZ_LR536452	Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 3	186356-186387	9	0.719
NZ_CP015455_1	1.24\|898095\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898095-898126	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	205050-205081	9	0.719
NZ_CP015455_1	1.24\|898095\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898095-898126	32	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	42281-42312	9	0.719
NZ_CP015455_1	1.24\|898095\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898095-898126	32	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	632846-632877	9	0.719
NZ_CP015455_1	1.24\|898095\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898095-898126	32	AP014365	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C61, * SEQUENCING IN PROGRESS *	15514-15545	9	0.719
NZ_CP015455_1	1.26\|898217\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898217-898248	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1620242-1620273	9	0.719
NZ_CP015455_1	1.26\|898217\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898217-898248	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	25678-25709	9	0.719
NZ_CP015455_1	1.26\|898217\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898217-898248	32	MG820643	Propionibacterium phage pa35, complete genome	25581-25612	9	0.719
NZ_CP015455_1	1.26\|898217\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898217-898248	32	NC_027621	Propionibacterium phage Wizzo, complete genome	25245-25276	9	0.719
NZ_CP015455_1	1.29\|898400\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	898400-898431	32	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	26135-26166	9	0.719
NZ_CP015455_1	1.2\|896752\|32\|NZ_CP015455\|PILER-CR,CRISPRCasFinder,CRT	896752-896783	32	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	206229-206260	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MG770897	Staphylococcus phage SH-St 15644, complete genome	9545-9576	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	NC_011344	Staphylococcus phage phi2958PVL, complete genome	30471-30502	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MG029513	Staphylococcus phage phiSa2wa_st72, complete genome	30851-30882	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MH384261	Staphylococcus phage SA137ruMSSAST121PVL, complete genome	29642-29673	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	AB045978	Staphylococcus phage phiSLT DNA, complete genome	26437-26468	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	KY056620	Staphylococcus phage P240, complete genome	9695-9726	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MG029518	Staphylococcus phage phiSa2wa_st121mssa, complete genome	29259-29290	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MK348510	Staphylococcus phage vB_SauS_fPfSau02, complete genome	9705-9736	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MG029514	Staphylococcus phage phiSa2wa_st78, complete genome	29517-29548	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MT366568	Staphylococcus phage R4, complete genome	9696-9727	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MK801681	Staphylococcus phage SAP11, complete genome	11017-11048	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	NC_004616	Staphylococcus prophage phi 12, complete genome	30238-30269	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	JQ957932	Staphylococcus phage StauST398-2, complete genome	29278-29309	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MG029511	Staphylococcus phage phiSa2wa_st30, complete genome	29442-29473	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	AP012341	Staphylococcus phage phi7401PVL DNA, complete genome	30400-30431	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	NC_002661	Staphylococcus phage phiSLT, complete genome	26437-26468	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	AF424782	Staphylococcus aureus phage phi 12, complete genome	30238-30269	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MK940809	Staphylococcus phage Sa2wa_st8, complete genome	29552-29583	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	NC_009762	Staphylococcus phage tp310-2, complete sequence	32955-32986	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MF580410	Staphylococcus phage phiSa2wa_st1, complete genome	29223-29254	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	JQ779023	Staphylococcus phage SMSAP5, complete genome	35798-35829	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	EU861005	Staphylococcus phage phiSauS-IPLA35, complete genome	29646-29677	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	KT186243	Staphylococcus phage vB_SauS_phi2, complete genome	9695-9726	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	AY954956	Bacteriophage 3A, complete genome	9765-9796	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	AP009363	Staphylococcus phage phi2958PVL proviral DNA, complete seqeunce	30471-30502	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	KF598856	Staphylococcus phage YMC/09/04/R1988, complete genome	9706-9737	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	NC_007053	Staphylococcus phage 3A, complete genome	9765-9796	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	AY954957	Bacteriophage 47, complete genome	9696-9727	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MG029515	Staphylococcus phage phiSa2wa_st80, complete genome	28826-28857	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MG029517	Staphylococcus phage phiSa2wa_st93, complete genome	29551-29582	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MG029516	Staphylococcus phage phiSa2wa_st93mssa, complete genome	29551-29582	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	AY954955	Bacteriophage 42e, complete genome	9695-9726	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	MK801680	Staphylococcus phage SAP8, complete genome	9706-9737	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	NC_007054	Staphylococcus phage 47, complete genome	9696-9727	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	NC_007052	Staphylococcus phage 42e, complete genome	9695-9726	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	LC541428	Staphylococcus phage vB_SauS_JS02 DNA, complete genome	30176-30207	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	JX174275	Staphylococcus phage LH1, complete genome	9696-9727	10	0.688
NZ_CP015455_1	1.10\|897241\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897241-897272	32	AF513855	Staphylococcus aureus bacteriophage phi 3A phi12 major tail protein-like protein, phiSLT ORF116b-like protein, hypothetical protein, and phi12 tail fiber protein-like protein genes, complete cds	2407-2438	10	0.688
NZ_CP015455_1	1.14\|897485\|32\|NZ_CP015455\|CRISPRCasFinder,CRT	897485-897516	32	MG545917	Vibrio phage VEN, complete genome	33085-33116	10	0.688
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	109799-109830	10	0.688
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_CP019313	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-1, complete sequence	69248-69279	10	0.688
NZ_CP015455_1	1.20\|897851\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897851-897882	32	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	130243-130274	10	0.688
NZ_CP015455_1	1.23\|898034\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898034-898065	32	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	41582-41613	10	0.688
NZ_CP015455_1	1.26\|898217\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	898217-898248	32	NZ_CP035502	Sphingosinicella sp. BN140058 plasmid p1, complete sequence	139733-139764	10	0.688
NZ_CP015455_1	1.16\|897607\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897607-897638	32	NZ_CP011044	Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI1, complete sequence	23380-23411	11	0.656
NZ_CP015455_1	1.16\|897607\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897607-897638	32	NZ_CP021035	Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI1, complete sequence	23380-23411	11	0.656
NZ_CP015455_1	1.16\|897607\|32\|NZ_CP015455\|CRISPRCasFinder,CRT,PILER-CR	897607-897638	32	NZ_CP021039	Clavibacter michiganensis subsp. insidiosus strain ATCC 10253 plasmid pCI1, complete sequence	23384-23415	11	0.656

1. spacer 1.4|896874|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to MH572453 (Microviridae sp. isolate SD_MC_65, complete genome) position: , mismatch: 5, identity: 0.844

gtttgccactttagtgggtattccgaaataat	CRISPR spacer
tgctgctactttagttggtattccgaaataat	Protospacer
  .***.******** ****************

2. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NC_007713 (Sodalis glossinidius str. 'morsitans' plasmid pSG1, complete sequence) position: , mismatch: 5, identity: 0.844

cagcccacgaaaccgcgctggccgaa-catgct	CRISPR spacer
tagcccacgaaaccgcgctgtgcgagtcatgc-	Protospacer
.*******************  ***. *****

3. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN854558 (Sodalis glossinidius str. 'morsitans' isolate B4 plasmid pSG1, complete sequence) position: , mismatch: 5, identity: 0.844

cagcccacgaaaccgcgctggccgaa-catgct	CRISPR spacer
tagcccacgaaaccgcgctgtgcgagtcatgc-	Protospacer
.*******************  ***. *****

4. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NC_007182 (Sodalis glossinidius pSG1 plasmid from Glossina austeni) position: , mismatch: 5, identity: 0.844

cagcccacgaaaccgcgctggccgaa-catgct	CRISPR spacer
tagcccacgaaaccgcgctgtgcgagtcatgc-	Protospacer
.*******************  ***. *****

5. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NC_007183 (Sodalis glossinidius pSG1 plasmid from Glossina palpalis palpalis) position: , mismatch: 5, identity: 0.844

cagcccacgaaaccgcgctggccgaa-catgct	CRISPR spacer
tagcccacgaaaccgcgctgtgcgagtcatgc-	Protospacer
.*******************  ***. *****

6. spacer 1.4|896874|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to MH572514 (Microviridae sp. isolate SD_HF_40, complete genome) position: , mismatch: 6, identity: 0.812

gtttgccactttagtgggtattccgaaataat	CRISPR spacer
tccagctactttagttggtattccgaaataat	Protospacer
 .. **.******** ****************

7. spacer 1.2|896752|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to NC_008243 (Chelativorans sp. BNC1 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

gttttcgccgcgtccacggcctccgcataggt	CRISPR spacer
gcttccgccgcgtcctcggcctccgcggccgt	Protospacer
*.**.********** **********.   **

8. spacer 1.2|896752|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022849 (Bosea sp. ANAM02 plasmid pANAM02, complete sequence) position: , mismatch: 7, identity: 0.781

gttttcg----ccgcgtccacggcctccgcataggt	CRISPR spacer
----tcgcagaccgcgtccacggcctgcgcagaggc	Protospacer
    ***    *************** **** ***.

9. spacer 1.4|896874|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to KC131021 (Marine gokushovirus isolate GOM, complete genome) position: , mismatch: 7, identity: 0.781

gtttgccactttagtgggtattccgaaataat	CRISPR spacer
tcctcctacttttgttggtattccgaaataat	Protospacer
 ..* *.***** ** ****************

10. spacer 1.8|897118|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to NC_027204 (Sinorhizobium phage phiM12, complete genome) position: , mismatch: 7, identity: 0.781

cacgattggcgggatagggagtattacaggcc	CRISPR spacer
cacgattgccgggatagggaatatttcgtggt	Protospacer
******** ***********.**** *. * .

11. spacer 1.8|897118|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to KR052481 (Sinorhizobium phage phiM19, complete genome) position: , mismatch: 7, identity: 0.781

cacgattggcgggatagggagtattacaggcc	CRISPR spacer
cacgattgccgggatagggaatatttcgtggt	Protospacer
******** ***********.**** *. * .

12. spacer 1.8|897118|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to KR052480 (Sinorhizobium phage phiM7, complete genome) position: , mismatch: 7, identity: 0.781

cacgattggcgggatagggagtattacaggcc	CRISPR spacer
cacgattgccgggatagggaatatttcgtggt	Protospacer
******** ***********.**** *. * .

13. spacer 1.27|898278|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gtcttgacccgcgtgccccacacgccgaccac	CRISPR spacer
acgtgcacccgcgcgccccgcacgccgaccac	Protospacer
.. *  *******.*****.************

14. spacer 1.31|897303|31|NZ_CP015455|PILER-CR matches to NZ_CP042167 (Burkholderia contaminans strain ZCC plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

cggggtgattccggtaaattgggaggtgtcg	CRISPR spacer
catcgcgattccgataaattgggaggtgaca	Protospacer
*.  *.*******.************** *.

15. spacer 1.31|897303|31|NZ_CP015455|PILER-CR matches to NZ_CP028810 (Burkholderia contaminans strain SK875 plasmid p875, complete sequence) position: , mismatch: 7, identity: 0.774

cggggtgattccggtaaattgggaggtgtcg	CRISPR spacer
catcgcgattccgataaattgggaggtgaca	Protospacer
*.  *.*******.************** *.

16. spacer 1.31|897303|31|NZ_CP015455|PILER-CR matches to NZ_CP046610 (Burkholderia contaminans strain XL73 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

cggggtgattccggtaaattgggaggtgtcg	CRISPR spacer
catcgcgattccgataaattgggaggtgaca	Protospacer
*.  *.*******.************** *.

17. spacer 1.31|897303|31|NZ_CP015455|PILER-CR matches to NC_008545 (Burkholderia cenocepacia HI2424 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

cggggtgattccggtaaattgggaggtgtcg	CRISPR spacer
catcgcgattccgataaattgggaggtgaca	Protospacer
*.  *.*******.************** *.

18. spacer 1.4|896874|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to MH572402 (Microviridae sp. isolate SD_SF_47, complete genome) position: , mismatch: 8, identity: 0.75

gtttgccactttagtgggtattccgaaataat	CRISPR spacer
tccacctacttttgttggtattccgaaataat	Protospacer
 ..  *.***** ** ****************

19. spacer 1.8|897118|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046917 (Paraburkholderia sp. DHF22 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

cacgattggcgggatagggagtattacaggcc	CRISPR spacer
cacgattgccgggatatggagtaatgccaact	Protospacer
******** ******* ****** *.* ..*.

20. spacer 1.17|897668|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 8, identity: 0.75

ctgtggcgcacaatacggcctgtgcgtggttt	CRISPR spacer
ctgtgccgcacaatacggcgtgttctttttgg	Protospacer
***** ************* *** * *  *

21. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045385 (Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence) position: , mismatch: 8, identity: 0.75

cagcccacgaaaccgcgctggccgaacatgct	CRISPR spacer
atgacggcgaaaccgccctgcccgaacatgcg	Protospacer
  * * .********* *** **********

22. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 8, identity: 0.75

cagcccacgaaaccgcgctggccgaacatgct	CRISPR spacer
ccgttgtcgaagccgcactggccgaacatggt	Protospacer
* *..  ****.****.************* *

23. spacer 1.26|898217|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

ccacaccttgccgccttgcgtcgcggcctgct	CRISPR spacer
tccgaccttgccgcctcgcgtcgccgccgtcc	Protospacer
.*  ************.******* ***  *.

24. spacer 1.26|898217|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NC_015951 (Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence) position: , mismatch: 8, identity: 0.75

ccacaccttgccgccttgcgtcgcggcctgct	CRISPR spacer
caacgtgaggccgcctcgcggcgcggcctgct	Protospacer
* **..   *******.*** ***********

25. spacer 1.27|898278|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NC_011758 (Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence) position: , mismatch: 8, identity: 0.75

gtcttgacccgcgtgccccacacgccgaccac	CRISPR spacer
gccggcaatcgcgtgcccgacgcgccgaccac	Protospacer
*.*   * .********* **.**********

26. spacer 1.2|896752|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to JQ807251 (Environmental Halophage eHP-32, partial genome) position: , mismatch: 9, identity: 0.719

gttttcgccgcgtccacggcctccgcataggt	CRISPR spacer
gggatcgccgcgtcgacggcgtccgcaactgg	Protospacer
*   ********** ***** ******   *

27. spacer 1.6|896996|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to MK448586 (Streptococcus satellite phage Javan627, complete genome) position: , mismatch: 9, identity: 0.719

atatgatcttcttcgccgttaactattgatcc	CRISPR spacer
aatgaatcttctttgccgttaacaattgaaaa	Protospacer
*   .********.********* *****

28. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

cagcccacgaaaccgcgctggccgaacatgct	CRISPR spacer
tggttctcgaaaccgcgcaggccgaccatgtc	Protospacer
..*..* *********** ****** ****..

29. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.719

cagcccacgaaaccgcgctggccgaacatgct	CRISPR spacer
ccatccacgaagccgcgatggccgaacctttc	Protospacer
* ..*******.***** ********* * ..

30. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040761 (Paracoccus sp. 2251 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

cagcccacgaaaccgcgctggccgaacatgct	CRISPR spacer
acgcccacgaagacgcgctggccgatgatcac	Protospacer
  *********. ************  **  .

31. spacer 1.21|897912|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to MN694017 (Marine virus AFVG_250M1107, complete genome) position: , mismatch: 9, identity: 0.719

acaacgcccgtttaaccagtccggttgattta---	CRISPR spacer
ccaatgcccgtttaaacagtccg---ggtccacgt	Protospacer
 ***.********** *******   *.*..*

32. spacer 1.23|898034|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR536452 (Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 3) position: , mismatch: 9, identity: 0.719

cctttcgcagtatgcagaacgtcgccagcgat	CRISPR spacer
tgcagcgcagtatgcaggacgtcgcccgcaaa	Protospacer
. .  ************.******** **.*

33. spacer 1.24|898095|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

ccgttgctgtaataggtggtgttggcggcgtg	CRISPR spacer
tcgcccttgtaataggtcgtgtcggcggcgga	Protospacer
.**.. .********** ****.******* .

34. spacer 1.24|898095|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

ccgttgctgtaataggtggtgttggcggcgtg	CRISPR spacer
tcgcccttgtaataggtcgtgtcggcggcgga	Protospacer
.**.. .********** ****.******* .

35. spacer 1.24|898095|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.719

ccgttgctgtaataggtggtgttggcggcgtg	CRISPR spacer
tcgcccttgtaataggtcgtgtcggcggcgga	Protospacer
.**.. .********** ****.******* .

36. spacer 1.24|898095|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to AP014365 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C61, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ccgttgctgtaataggtggtgttggcggcgtg	CRISPR spacer
tctttgctgtaatagttgttgttggccaccga	Protospacer
.* ************ ** ******* .*  .

37. spacer 1.26|898217|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

ccacaccttgccgccttgcgtcgcggcctgct	CRISPR spacer
cgcggttttgccgtcttccgtcgcggcctgat	Protospacer
*   ...******.*** ************ *

38. spacer 1.26|898217|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

ccacaccttgccgccttgcgtcgcggcctgct	CRISPR spacer
cgcggttttgccgtcttccgtcgcggcctgat	Protospacer
*   ...******.*** ************ *

39. spacer 1.26|898217|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to MG820643 (Propionibacterium phage pa35, complete genome) position: , mismatch: 9, identity: 0.719

ccacaccttgccgccttgcgtcgcggcctgct	CRISPR spacer
gttccatttgacgccttgcgtggcggcctgtt	Protospacer
 . *  .*** ********** ********.*

40. spacer 1.26|898217|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NC_027621 (Propionibacterium phage Wizzo, complete genome) position: , mismatch: 9, identity: 0.719

ccacaccttgccgccttgcgtcgcggcctgct	CRISPR spacer
gttccatttgacgccttgcgtggcggcctgtt	Protospacer
 . *  .*** ********** ********.*

41. spacer 1.29|898400|32|NZ_CP015455|CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgct----aaaccttgcaaaaaacggctggcac	CRISPR spacer
----gccatggaaacccagcaaaaaacggctggcga	Protospacer
    **.    *****. ****************.

42. spacer 1.2|896752|32|NZ_CP015455|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 10, identity: 0.688

gttttcgccgcgtccacggcctccgcataggt	CRISPR spacer
cttttcgccgcgtcctcggccccctggccgaa	Protospacer
 ************** *****.**  .. *.

43. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG770897 (Staphylococcus phage SH-St 15644, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

44. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to NC_011344 (Staphylococcus phage phi2958PVL, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

45. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG029513 (Staphylococcus phage phiSa2wa_st72, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

46. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MH384261 (Staphylococcus phage SA137ruMSSAST121PVL, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

47. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to AB045978 (Staphylococcus phage phiSLT DNA, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

48. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to KY056620 (Staphylococcus phage P240, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

49. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG029518 (Staphylococcus phage phiSa2wa_st121mssa, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

50. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MK348510 (Staphylococcus phage vB_SauS_fPfSau02, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

51. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG029514 (Staphylococcus phage phiSa2wa_st78, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

52. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MT366568 (Staphylococcus phage R4, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

53. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MK801681 (Staphylococcus phage SAP11, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

54. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to NC_004616 (Staphylococcus prophage phi 12, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

55. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to JQ957932 (Staphylococcus phage StauST398-2, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

56. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG029511 (Staphylococcus phage phiSa2wa_st30, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

57. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to AP012341 (Staphylococcus phage phi7401PVL DNA, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

58. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to NC_002661 (Staphylococcus phage phiSLT, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

59. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to AF424782 (Staphylococcus aureus phage phi 12, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

60. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MK940809 (Staphylococcus phage Sa2wa_st8, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

61. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to NC_009762 (Staphylococcus phage tp310-2, complete sequence) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

62. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MF580410 (Staphylococcus phage phiSa2wa_st1, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

63. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to JQ779023 (Staphylococcus phage SMSAP5, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

64. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to EU861005 (Staphylococcus phage phiSauS-IPLA35, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

65. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to KT186243 (Staphylococcus phage vB_SauS_phi2, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

66. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to AY954956 (Bacteriophage 3A, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

67. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to AP009363 (Staphylococcus phage phi2958PVL proviral DNA, complete seqeunce) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

68. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to KF598856 (Staphylococcus phage YMC/09/04/R1988, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

69. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to NC_007053 (Staphylococcus phage 3A, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

70. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to AY954957 (Bacteriophage 47, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

71. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG029515 (Staphylococcus phage phiSa2wa_st80, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

72. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG029517 (Staphylococcus phage phiSa2wa_st93, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

73. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG029516 (Staphylococcus phage phiSa2wa_st93mssa, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

74. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to AY954955 (Bacteriophage 42e, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

75. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MK801680 (Staphylococcus phage SAP8, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

76. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to NC_007054 (Staphylococcus phage 47, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

77. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to NC_007052 (Staphylococcus phage 42e, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

78. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to LC541428 (Staphylococcus phage vB_SauS_JS02 DNA, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

79. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to JX174275 (Staphylococcus phage LH1, complete genome) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

80. spacer 1.10|897241|32|NZ_CP015455|CRISPRCasFinder,CRT matches to AF513855 (Staphylococcus aureus bacteriophage phi 3A phi12 major tail protein-like protein, phiSLT ORF116b-like protein, hypothetical protein, and phi12 tail fiber protein-like protein genes, complete cds) position: , mismatch: 10, identity: 0.688

acattgttcgttgggcattaaagcgtggtagg	CRISPR spacer
ccattgtttgtttggcattaaagcctaaagct	Protospacer
 *******.*** *********** *.. .

81. spacer 1.14|897485|32|NZ_CP015455|CRISPRCasFinder,CRT matches to MG545917 (Vibrio phage VEN, complete genome) position: , mismatch: 10, identity: 0.688

gtgcctgatgcagatcaacgttgagatccctg	CRISPR spacer
atgcctgatgcagctcaacgtagacgcttcac	Protospacer
.************ ******* ** ....*

82. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

cagcccacgaaaccgcgctggccgaacatgct	CRISPR spacer
tggttttcgaaaccgcgcaggccgaccatgtc	Protospacer
..*... *********** ****** ****..

83. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019313 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-1, complete sequence) position: , mismatch: 10, identity: 0.688

cagcccacgaaaccgcgctggccgaacatgct	CRISPR spacer
caacccacgaaagcgcgctggcccaggtcatc	Protospacer
**.********* ********** *.  ....

84. spacer 1.20|897851|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 10, identity: 0.688

cagcccacgaaaccgcgctggccgaacatgct	CRISPR spacer
tggttttcgaaaccgcgcaggccgaccatgtc	Protospacer
..*... *********** ****** ****..

85. spacer 1.23|898034|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 10, identity: 0.688

cctttcgcagtatgcagaacgtcgccagcgat	CRISPR spacer
tccagcgcaggatgaagaacgtcgccagaatc	Protospacer
.*.  ***** *** ************* . .

86. spacer 1.26|898217|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035502 (Sphingosinicella sp. BN140058 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

ccacaccttgccgccttgcgtcgcggcctgct	CRISPR spacer
tgcgaccttgccgccttgctgcgcggcgatcg	Protospacer
.   ***************  ******   *

87. spacer 1.16|897607|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011044 (Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI1, complete sequence) position: , mismatch: 11, identity: 0.656

gaggatgagcggcatgcagcataccaagccag	CRISPR spacer
cctcgcgagcggcatgcagcacatcaagcaga	Protospacer
    ..***************.*.***** ..

88. spacer 1.16|897607|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021035 (Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI1, complete sequence) position: , mismatch: 11, identity: 0.656

gaggatgagcggcatgcagcataccaagccag	CRISPR spacer
cctcgcgagcggcatgcagcacatcaagcaga	Protospacer
    ..***************.*.***** ..

89. spacer 1.16|897607|32|NZ_CP015455|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021039 (Clavibacter michiganensis subsp. insidiosus strain ATCC 10253 plasmid pCI1, complete sequence) position: , mismatch: 11, identity: 0.656

gaggatgagcggcatgcagcataccaagccag	CRISPR spacer
cctcgcgagcggcatgcagcacatcaagcaga	Protospacer
    ..***************.*.***** ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1299383 : 1305040

uncultured_Mediterranean_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072287464.1\|1299383_1299665_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.0e-16	48.3
WP_072288159.1\|1299688_1300039_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_072287465.1\|1300096_1300849_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.6e-56	47.2
WP_072287466.1\|1301119_1301773_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.5e-31	47.5
WP_072287467.1\|1301775_1302369_+	DedA family protein	NA	NA	NA	NA
WP_072287468.1\|1302397_1303240_+	peptidoglycan DD-metalloendopeptidase family protein	A0A1B0XUH3	Freshwater_phage	4.1e-05	33.6
WP_145926480.1\|1303511_1304468_+	sigma-70 family RNA polymerase sigma factor	A0A2I7SAT0	Vibrio_phage	9.0e-33	36.3
WP_072287470.1\|1304524_1305040_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.6e-28	38.3

DBSCAN-SWA_2

1311537 : 1385344

Staphylococcus_phage(16.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072287477.1\|1311537_1311771_+	acyl carrier protein	B2ZXV3	Ralstonia_phage	9.2e-08	43.7
WP_072287478.1\|1311909_1313142_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_072287479.1\|1313151_1313607_+	ribose 5-phosphate isomerase B	A0A222YX14	Synechococcus_phage	1.5e-17	34.6
WP_072287480.1\|1313715_1314966_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	8.9e-97	52.3
WP_072287481.1\|1314965_1315442_+	cytidine deaminase	G3MA58	Bacillus_virus	1.4e-23	40.1
WP_072287482.1\|1315438_1315912_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_072288162.1\|1315977_1317069_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.2e-43	31.4
WP_072287483.1\|1317053_1317704_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	7.5e-31	37.2
WP_072287484.1\|1317999_1319205_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.8e-100	48.5
WP_072287485.1\|1319271_1319736_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.6e-38	63.8
WP_072287486.1\|1319742_1320213_+	transcription antitermination factor NusB	NA	NA	NA	NA
WP_072287487.1\|1320423_1321734_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_072287488.1\|1322536_1323013_-\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_072287489.1\|1323215_1324508_-	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA
WP_072287490.1\|1324738_1326406_+	fibronectin/fibrinogen-binding protein	NA	NA	NA	NA
WP_072502030.1\|1326413_1326692_-	integration host factor subunit beta	A0A0H3UZA0	Geobacillus_virus	1.5e-12	40.4
WP_072287491.1\|1326958_1327525_-	cupin domain-containing protein	NA	NA	NA	NA
WP_072288163.1\|1327562_1328129_-	cupin domain-containing protein	NA	NA	NA	NA
WP_072287492.1\|1328398_1329382_+	biotin synthase BioB	NA	NA	NA	NA
WP_072287493.1\|1329368_1330094_+	dethiobiotin synthase	NA	NA	NA	NA
WP_072287494.1\|1332042_1333401_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	NA	NA	NA
WP_072287495.1\|1334601_1335177_+	isochorismatase family protein	A0A2H4UW48	Bodo_saltans_virus	4.8e-05	36.2
WP_145926481.1\|1335203_1336400_+	glycosyltransferase	NA	NA	NA	NA
WP_072287497.1\|1336845_1337910_+	polysaccharide biosynthesis/export family protein	NA	NA	NA	NA
WP_072288165.1\|1338047_1340462_+	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_072287498.1\|1341014_1341782_+	hypothetical protein	NA	NA	NA	NA
WP_072287499.1\|1341837_1343175_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	3.4e-70	35.4
WP_072287500.1\|1343285_1343663_+	GxxExxY protein	A9YW17	Ostreococcus_tauri_virus	3.2e-10	36.6
WP_083558783.1\|1343748_1344756_+	NAD-dependent epimerase	NA	NA	NA	NA
WP_072287502.1\|1346595_1348374_+	anion permease	NA	NA	NA	NA
WP_072287503.1\|1348570_1349476_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_072287504.1\|1349641_1351528_+	sulfate adenylyltransferase subunit CysN	A0A1V0SGC3	Hokovirus	3.0e-32	30.8
WP_072287505.1\|1351805_1352183_+	four helix bundle protein	NA	NA	NA	NA
WP_083558784.1\|1352179_1353043_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_072287507.1\|1354962_1355382_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_072287508.1\|1355374_1355788_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_072287509.1\|1356436_1357411_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	8.6e-47	35.3
WP_072287510.1\|1358641_1358944_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.3e-22	50.6
WP_072287511.1\|1359075_1360590_+	hypothetical protein	NA	NA	NA	NA
WP_072287512.1\|1360632_1361259_+	hypothetical protein	NA	NA	NA	NA
WP_145928195.1\|1361781_1362054_+	glycosyltransferase	NA	NA	NA	NA
WP_158515871.1\|1362313_1362859_+	glycosyltransferase	NA	NA	NA	NA
WP_083558786.1\|1362874_1363240_+\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	1.0e-05	37.0
WP_158514030.1\|1363287_1363491_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_145926433.1\|1363625_1364828_+	glycosyltransferase	NA	NA	NA	NA
WP_145928196.1\|1365170_1366127_+	hypothetical protein	NA	NA	NA	NA
WP_145926435.1\|1366325_1366478_-\|transposase	transposase	NA	NA	NA	NA
WP_072287518.1\|1367181_1368504_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_083558787.1\|1368760_1368886_-	hypothetical protein	NA	NA	NA	NA
WP_072287519.1\|1369140_1370424_+	glycosyltransferase	NA	NA	NA	NA
WP_083558788.1\|1371150_1371987_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_072287521.1\|1371989_1372829_+	glycosyltransferase	NA	NA	NA	NA
WP_072287522.1\|1372928_1373294_+	four helix bundle protein	NA	NA	NA	NA
WP_072287523.1\|1373425_1374604_+	GDP-mannose 4,6-dehydratase	M1HF79	Acanthocystis_turfacea_Chlorella_virus	7.5e-138	63.7
WP_072287524.1\|1374889_1375276_+	GxxExxY protein	A0A0P0YNF4	Yellowstone_lake_phycodnavirus	1.2e-07	35.8
WP_145926436.1\|1375596_1376737_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.9e-54	43.0
WP_072287526.1\|1377386_1378454_+	GDP-L-fucose synthase	M1HWW2	Paramecium_bursaria_Chlorella_virus	4.8e-91	49.7
WP_072287528.1\|1378963_1380469_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	2.2e-49	28.5
WP_072287529.1\|1380667_1381027_-	four helix bundle protein	NA	NA	NA	NA
WP_072287530.1\|1381170_1382520_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	7.5e-33	27.2
WP_072287531.1\|1382540_1383449_+	hypothetical protein	A0A2K9L639	Tupanvirus	1.7e-09	25.6
WP_072287532.1\|1384119_1384410_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	4.7e-25	63.2
WP_072287533.1\|1384399_1384645_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_072287534.1\|1384866_1385094_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_072287535.1\|1385077_1385344_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5S8E8	Streptococcus_phage	6.8e-15	41.9

DBSCAN-SWA_3

2404345 : 2441895

Rhodobacter_phage(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072285813.1\|2404345_2405512_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_072285814.1\|2405849_2406689_+	hypothetical protein	NA	NA	NA	NA
WP_072285815.1\|2407238_2407556_+	hypothetical protein	NA	NA	NA	NA
WP_072285816.1\|2407689_2407965_-	hypothetical protein	NA	NA	NA	NA
WP_072285817.1\|2407978_2408854_-	ParM/StbA family protein	NA	NA	NA	NA
WP_072285818.1\|2409463_2409886_-	hypothetical protein	NA	NA	NA	NA
WP_072285819.1\|2409845_2410334_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_072285820.1\|2410314_2410998_-	hypothetical protein	NA	NA	NA	NA
WP_145926461.1\|2411278_2412064_-	replication initiator protein A	A0A0K1LLD0	Rhodobacter_phage	5.8e-46	41.2
WP_072285822.1\|2412488_2413136_+	helix-turn-helix transcriptional regulator	A0A1C6ZDG7	Pseudomonas_phage	8.2e-30	34.7
WP_072502086.1\|2413577_2414801_+	hypothetical protein	NA	NA	NA	NA
WP_158513970.1\|2414818_2414995_+	hypothetical protein	NA	NA	NA	NA
WP_072285824.1\|2415212_2415854_+	hypothetical protein	NA	NA	NA	NA
WP_083558452.1\|2416016_2416778_+	AbiEi antitoxin N-terminal domain-containing protein	NA	NA	NA	NA
WP_072285825.1\|2416770_2417694_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_072287983.1\|2418238_2418850_+	transcriptional regulator	NA	NA	NA	NA
WP_072285826.1\|2418830_2419277_+	hypothetical protein	NA	NA	NA	NA
WP_072285827.1\|2419366_2419858_+	ferritin family protein	NA	NA	NA	NA
WP_072285828.1\|2419953_2420244_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_072285829.1\|2421048_2422089_+	DMT family transporter	NA	NA	NA	NA
WP_072285830.1\|2422092_2422374_+	DNA-binding protein	NA	NA	NA	NA
WP_145926350.1\|2422709_2423921_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.0e-20	34.5
WP_072285832.1\|2424143_2425124_-	class II fructose-1,6-bisphosphate aldolase	NA	NA	NA	NA
WP_072285833.1\|2425536_2426982_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_072285834.1\|2427179_2427374_-	30S ribosomal protein S21	M1HLV7	Pelagibacter_phage	8.0e-05	58.5
WP_072285835.1\|2427598_2428711_-	hypothetical protein	NA	NA	NA	NA
WP_072285836.1\|2428899_2429811_+	DUF815 domain-containing protein	NA	NA	NA	NA
WP_072285837.1\|2429968_2430685_+	PilZ domain-containing protein	NA	NA	NA	NA
WP_072285839.1\|2431785_2434044_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.0e-163	42.0
WP_072285840.1\|2434057_2434372_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-13	46.9
WP_072285841.1\|2434671_2435676_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_072285842.1\|2435672_2436605_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_072285843.1\|2436790_2437174_-	hypothetical protein	NA	NA	NA	NA
WP_072285844.1\|2437173_2438496_-	diguanylate cyclase	NA	NA	NA	NA
WP_083558455.1\|2438685_2439258_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_072285845.1\|2439494_2440682_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_072285846.1\|2441020_2441227_-	hypothetical protein	NA	NA	NA	NA
WP_072285847.1\|2441436_2441895_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA

DBSCAN-SWA_4

2985214 : 2999362

Acinetobacter_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072286338.1\|2985214_2985955_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_145926436.1\|2985974_2987116_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.9e-54	43.0
WP_072286340.1\|2987987_2988797_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	3.5e-09	26.8
WP_072286341.1\|2989171_2991187_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_072502107.1\|2991585_2992029_+	PocR ligand-binding domain-containing protein	NA	NA	NA	NA
WP_072286343.1\|2992377_2992623_-	plasmid stabilization protein	NA	NA	NA	NA
WP_145926375.1\|2992664_2993375_-	hypothetical protein	NA	NA	NA	NA
WP_072286345.1\|2993404_2994385_-\|transposase	transposase	NA	NA	NA	NA
WP_158513984.1\|2994540_2994759_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.6e-12	51.5
WP_072286347.1\|2995494_2995797_+	DUF2085 domain-containing protein	NA	NA	NA	NA
WP_072285697.1\|2995998_2997342_-\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_072286349.1\|2997789_2998257_+	hypothetical protein	NA	NA	NA	NA
WP_072286350.1\|2998381_2999362_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015455

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection