CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP013290	Janibacter indicus strain YFY001 chromosome, complete genome	3 crisprs	csa3,DEDDh,WYL,cas4,DinG,cas3,RT	0	1	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP013290_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013290_1

1130136-1130242

Orphan

Consensus_repeat	Method
GGCAACAACCCCTTCGCCTCCAGCCAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013290_1

>merge|NZ_CP013290|1|1130136-1130242|CRISPRCasFinder
GGCAACAACCCCTTCGCCTCCAGCCAGGGGATGGGGACCCGTCGTGGCGAAGGGGGTGGCTCCGGCGGCGCCCGCCCCGGCAACAACCCCTTCGCGTCCAGCCAGGG

>NZ_CP013290|1|1|1130136-1130242|CRISPRCasFinder
GGCAACAACCCCTTCGCCTCCAGCCAGGG	GATGGGGACCCGTCGTGGCGAAGGGGGTGGCTCCGGCGGCGCCCGCCCC
GGCAACAACCCCTTCGCGTCCAGCCAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013290.1\|WP_125932789.1\|1126592_1127444_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013290.1\|WP_072626149.1\|1137148_1137607_+\|DUF4442-domain-containing-protein	unknown	unknown	gnl\|CDD\|373120
NZ_CP013290.1\|WP_072624206.1\|1124674_1125595_+\|DUF559-domain-containing-protein	unknown	unknown	unknown
NZ_CP013290.1\|WP_072624211.1\|1129230_1129608_+\|YlxR-family-protein	unknown	unknown	gnl\|CDD\|377288
NZ_CP013290.1\|WP_072624213.1\|1133249_1133552_+\|DUF4190-domain-containing-protein	unknown	unknown	gnl\|CDD\|379388
NZ_CP013290.1\|WP_072624203.1\|1121964_1123470_-\|cobyric-acid-synthase	unknown	unknown	gnl\|CDD\|234838
NZ_CP013290.1\|WP_072624205.1\|1124226_1124511_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378382
NZ_CP013290.1\|WP_083546038.1\|1135959_1137114_+\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
NZ_CP013290.1\|WP_072624204.1\|1123508_1124114_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP013290.1\|WP_072624210.1\|1128103_1129201_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
NZ_CP013290.1\|WP_072624215.1\|1134068_1134989_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235113
NZ_CP013290.1\|WP_072624214.1\|1133619_1134072_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP013290.1\|WP_125932790.1\|1141731_1141920_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013290.1\|WP_072624212.1\|1132622_1133051_+\|DUF4190-domain-containing-protein	unknown	unknown	gnl\|CDD\|379388
NZ_CP013290.1\|WP_072624219.1\|1139666_1141646_+\|TIGR03960-family-B12-binding-radical-SAM-protein	unknown	unknown	gnl\|CDD\|188475
NZ_CP013290.1\|WP_072624209.1\|1127529_1128102_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP013290.1\|WP_072624216.1\|1135000_1135951_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP013290.1\|WP_072624202.1\|1121161_1121968_-\|precorrin-6A-synthase-(deacetylating)	unknown	unknown	gnl\|CDD\|381170
NZ_CP013290.1\|WP_072624218.1\|1137742_1139599_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|223953
NZ_CP013290.1\|WP_072624207.1\|1125693_1126596_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|309685

Protein	Function_ID	Function_description	E-value
NZ_CP013290.1\|WP_072626149.1\|1137148_1137607_+\|DUF4442-domain-containing-protein	gnl\|CDD\|373120	pfam14539, DUF4442, Domain of unknown function (DUF4442). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 139 and 165 amino acids in length. There is a conserved PYF sequence motif. There is a single completely conserved residue N that may be functionally important.	3.88228e-16
NZ_CP013290.1\|WP_072624215.1\|1134068_1134989_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	1.22587e-134
NZ_CP013290.1\|WP_072624211.1\|1129230_1129608_+\|YlxR-family-protein	gnl\|CDD\|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	7.11991e-24
NZ_CP013290.1\|WP_072624213.1\|1133249_1133552_+\|DUF4190-domain-containing-protein	gnl\|CDD\|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	0.000589893
NZ_CP013290.1\|WP_072624203.1\|1121964_1123470_-\|cobyric-acid-synthase	gnl\|CDD\|234838	PRK00784, PRK00784, cobyric acid synthase.	0
NZ_CP013290.1\|WP_072624205.1\|1124226_1124511_-\|hypothetical-protein	gnl\|CDD\|378382	pfam10081, Abhydrolase_9, Alpha/beta-hydrolase family. This is a family of alpha/beta hydrolases which may function as lipases. This domain is the catalytic domain and includes the catalytic triad and the GXSXG sequence motif which is a characteristic of these enzymes.	0.00040578
NZ_CP013290.1\|WP_083546038.1\|1135959_1137114_+\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	7.47118e-109
NZ_CP013290.1\|WP_072624204.1\|1123508_1124114_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	5.00866e-29
NZ_CP013290.1\|WP_072624210.1\|1128103_1129201_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	0
NZ_CP013290.1\|WP_072624214.1\|1133619_1134072_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	4.98044e-44
NZ_CP013290.1\|WP_072624212.1\|1132622_1133051_+\|DUF4190-domain-containing-protein	gnl\|CDD\|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	3.81258e-06
NZ_CP013290.1\|WP_072624219.1\|1139666_1141646_+\|TIGR03960-family-B12-binding-radical-SAM-protein	gnl\|CDD\|188475	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein. This model describes a radical SAM protein, or protein region, regularly found paired with or fused to a region described by TIGR03936. PSI-BLAST analysis of TIGR03936 suggests a relationship to the tRNA pseudouridine synthase TruA, suggesting that this system may act in RNA modification. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP013290.1\|WP_072624209.1\|1127529_1128102_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.66268e-31
NZ_CP013290.1\|WP_072624216.1\|1135000_1135951_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	2.31761e-113
NZ_CP013290.1\|WP_072624202.1\|1121161_1121968_-\|precorrin-6A-synthase-(deacetylating)	gnl\|CDD\|381170	cd11643, Precorrin-6A-synthase, Precorrin-6A synthase (also named CobF). Precorrin-6A synthase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model represents CobF, the precorrin-6A synthase, an enzyme specific to the aerobic pathway. After precorrin-4 is methylated at C-11 by CobM to produce precorrin-5, CobF catalyzes the removal of the extruded acyl group in the subsequent step, and the addition of a methyl group at C-1. The product of this reaction is precorrin-6A, which gets reduced by an NADH-dependent reductase to yield precorrin-6B. This family includes enzymes in GC-rich Gram-positive bacteria, alpha proteobacteria and Pseudomonas-related species.	1.40351e-117
NZ_CP013290.1\|WP_072624218.1\|1137742_1139599_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|223953	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism].	0
NZ_CP013290.1\|WP_072624207.1\|1125693_1126596_-\|phosphotransferase	gnl\|CDD\|309685	pfam04655, APH_6_hur, Aminoglycoside/hydroxyurea antibiotic resistance kinase. The aminoglycoside phosphotransferases achieve inactivation of their antibiotic substrates by phosphorylation utilising ATP. Likewise hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.	1.99929e-32

>NZ_CP013290.1|WP_072624211.1|1129230_1129608_+|YlxR-family-protein
MGIDRTGLQSDPPVSGPVRTCIGCRGRDSRSTLLRIVVETDDRGIATAVPDPRRRVPGRGAWLHADIACLDLAVRRRALSRAFRRPVEATDALRAWIEQMAQSQSVRTATESGFDADEHPMSTQQ
>NZ_CP013290.1|WP_072624210.1|1128103_1129201_+|transcription-termination/antitermination-protein-NusA
MDIDIHALKALEREREIPFDVLVDAIEAALLGAYHRTEGAYKNARAELGRKDGHVVVWAREEHVVEEQVPVEAGEGEEPPVDEEGAPLMRTRTRRELGPEFDDTPDNFGRVAAATARQVITQRMRDLEDEAILGDFRGREGDIVAGVIQQSSNPRNVLVDFGTVEGVLPSSEQVPGEVYNHGDRIRVYVVSVKRGLRGPEITLSRTHPNLVRKIFAMEVPEIADGSVEISALAREAGHRTKIAVHSKVPGLNAKGACIGAMGARVRAVMAHLQGEKIDIVDWSDDPQRFIAAALSPSKVESVTVVDPKLRSARVVVPDYQLSLAIGKEGQNARLAAKLTGWRIDIRPDTAPDSSGGVAVPGQPEG
>NZ_CP013290.1|WP_072624209.1|1127529_1128102_+|ribosome-maturation-factor-RimP
MGSDQDILEQVSDALGDDFTVAAVAVTPAGKRRVARITVERPVADPVGDTPVEPLTLDEIADATRLVSDALDASDVMGSQPYTLEVSTPGTDRPLTEPMHFRRTVGRLVEVTLRGSAADGLAPQGAKGDGTQITGRVLATTADGVDLHVKGTKRYAPHTQHIPFAEISKGVAQVEFTRPDTTPAPGETED
>NZ_CP013290.1|WP_125932789.1|1126592_1127444_-|hypothetical-protein
MPERPSRRLMLTGALAVATTALTGCGVRLEDDAPDLPFVPRREPIPAEQALLAVLGALEAGGEEHATQRADLLREALVEAQVPESVIADASAPASDAETAAAFEAAVRECGAGMLGLVGRLTATHRITSPLGDKPRLWTTPPAEAWTAGKIAADALEATRATMYALDLIAARSSTTVSKAVLDTGTELEGLAVRQTTAAGKHVGSATLGYERPDDLRGSKAMEWGTESFGKLLVAYGACFDGLADDRDAALETVTWMVTAERLSRPRFAQPVPVLYGDTTATG
>NZ_CP013290.1|WP_072624207.1|1125693_1126596_-|phosphotransferase
MRVEDAAALVPADFAARVAGFAAEGGPAGGDWVAALPRLVAEVLAEWELTVDDGAMTGHCSLVLPVRRPDGRAVLKLGWPHRESDGEHLALRAWDGRGAARLLRADPRRSVLLLERLTSEDLTEQWDEEAVAVVAGLYSDLHVDPLPQLPALVPWVGEILDRPAARRVPRRYVEQARSSLRSLGTEESAARLLHGDLHYGNVLSDGTDWVAIDPKPLVGHPAWEVAPLLTNRWAEMGTGPSLRWSVRRRVEVVCDVTGLDEDLVRAVSALRAMVGAIWGVEDGDAEAVSRAVTLVKALGD
>NZ_CP013290.1|WP_072624206.1|1124674_1125595_+|DUF559-domain-containing-protein
MHPIIRAALDAGDGTASSADLHRRGASRRDVERAIGAGDLVRVRRNALVEGERWRETKPWDRHDLRARAVVRALGDKPPLALTHHSALAVRGIDVHGVDDRVHVARIGSGRGRTDTGLASHRPLDESLTSVHRGLLTVIPAVACVQVASHFGGEAGLVSADHALHREVMTRADLDAAMVALRPWRWSREPAKMLALVDGRAESGAESRTRWALRTLGLRMPTPQVEIFDDAGEFVARVDFLYEDMKLVIEVDGRKKYEKAQDLWDEKMREDRLRALGYVVVRLTWADLDDLTVVRAKIQRGLALAA
>NZ_CP013290.1|WP_072624205.1|1124226_1124511_-|hypothetical-protein
MTERVDNMLVHERPEVHVVGESLGATAGQAVSSGSGAERPRSVCSVLWTGTPSGHRVGLPREVSVANLDDPVVHARRCATSSCRPTGPSGGCPS
>NZ_CP013290.1|WP_072624204.1|1123508_1124114_+|histidine-phosphatase-family-protein
MSPTHVHLIRHGQSTWNRDGLVQGAHEGPNQALLTDTGRGDAARAGMALAARIGPPRREHSLPLWSSDLVRALQTAEIISVALRPMGWSASVRNEPGLREQALGHLEGERTDSLSAVPVPEGQHISEVRWGEGGESMQEVFDRVGDWFAPALIEQPDHLVVVSHEHTIRAALAWLRSRSHRDIDWDEPITPGSVTTHDVVD
>NZ_CP013290.1|WP_072624203.1|1121964_1123470_-|cobyric-acid-synthase
MSGLLITGTSSDAGKSLVVTGLCRALARRGLSVAPYKAQNMSNHSMVCHDGSEIGRAQYLQAQAAGVEATSAMNPVLLKPGSDRRAHVVVRGRPAGELMAGEYATGRAHLAQAAFAAYEELATEHDLVVCEGAGSPAEINLRAGDYVNLGLAQRFSLPTVLVGDIDRGGVLAALYGTWALVSDEDRPLLAAYVINKFRGDASVLEPGLAEITRRTGMPSLGVLPWLQEVWLDSEDSLSMGAWGDAEDGVPADRRLSVAVVRLPRTSNGTDVDALAAEPGVDVRVTVDADAVREADLVVLPGSRATASDLAWLRRTGLADVVLERAARGAPVLGICGGYQMLLDEIVDDGVEGGVLRCDEGATKGGETTSAASVPGLGLLPGRVVFHEDKVLARPSGSWRGHGVEGYEIHHGVVAPSGGEDFPGGHAVGAVRGSIWHGTLECDAYRRALLDDVAATTGARWSAAPGATPFAARREGMIDILADALETHVDVDAVIAIAKEGR
>NZ_CP013290.1|WP_072624202.1|1121161_1121968_-|precorrin-6A-synthase-(deacetylating)
MSTKAPRRIHLIGIGAGSPEHVTAEAAAALAEVDVFLVADKGGVKDELVAVRRAICDRFIPADHAYEFVTVPDPKRGPDADRDSAEYAQGVRDWHAARTDAYVRIIDELPADAVVGFLVWGDPAFYDSTIRVVDAIGERIPTRVRVIPGISAFQTLAAAHGVVLHRVGEPVHITTGRRLVDEWRAAEAADLTLGTVVVMLDGHLHCRELAATHPDTVIHWGAYVGMPQQKLRAGRLADVIDEIVQLRADLREEHGWVMDVYALTPALP
>NZ_CP013290.1|WP_072624212.1|1132622_1133051_+|DUF4190-domain-containing-protein
MTTPPPPPGGGGNQPYDPSASNTGAGSMPGQGSAPDYGSAPGQPPQAPPPAPGGFPQGGEDKAKTMAIISLVTGGIGLLCCTWFVFSIAAIILGILGKKAPGSADSHKKAQIGLILGIVGVVLGVIMWPVLIATGSLDVYTN
>NZ_CP013290.1|WP_072624213.1|1133249_1133552_+|DUF4190-domain-containing-protein
MPYPQGGPPGRTGNARTLGIISVIAGAVGVPFACCCWFIGWIPAVAAVGTGIAGLSQLKREPDSDAKPFLIAGIVLGVVGLLLTVLSLVFGFANAVYNEY
>NZ_CP013290.1|WP_072624214.1|1133619_1134072_+|30S-ribosome-binding-factor-RbfA
MADPARARKIADRIQELIAANLQQVVKDPDLGFVTITDVRVTGDLQHASVFYTVFGDDAQRERSAEVLEANRGKLRSFVGKQLGIRLTPTLELIPDALPESASHIDDLLRSARERDEDLARSRSGAQPAGDADPYRTTEEGEGTSPSTEA
>NZ_CP013290.1|WP_072624215.1|1134068_1134989_+|tRNA-pseudouridine(55)-synthase-TruB
MSEGLVVVDKPAGWTSHDVVARGRRLYRTKKVGHAGTLDPMATGVLVLGVGRGTKLLTFLVGADKTYTATIRLGQATITDDAEGEITDLGEVAGIDRAAIDAAVTRLTGDIEQVPSAVSAIKIKGQRSYHRVRAGEEVDLPARAVTVSRFDVLDVRPTEADGHPVLDVDVVVEVSSGTYVRALARDLGADLGSRGHLTALRRTRVGGLTLEHAHTLDELTALRESGGDDAVLPITPLEKAAAAALTTRALTDDEARALGYGQRIASAEPGRVEPVAALSPTGELVAVLDESRARARAHVVFAPASS
>NZ_CP013290.1|WP_072624216.1|1135000_1135951_+|bifunctional-riboflavin-kinase/FAD-synthetase
MQHWTSPSDTPPQLRPCVATFGNFDGVHRGHRAILDELTRQGRERDLPAVAVTFDPHPVEVMHPERAPEIISPGPLRDELLEQAGIAGLLSLPFTTEFAQTSAVDYVVDTFVTGLQAQALVVGADTRGFGAGYTGDVDLLRSLGEEHGFDVVVIEDQGETERWSSSAVRTHLAAGEVAEASLILGRPHRVVGTVVHGHHRGRELGYPTANLGADSLGLVPADGVYAGWLVRLDLPEGDPERRLPAAISVGTNPTFDGQVRVVESYVLDRTDLDLYGERVAVDFVGHVRPTLRFDSIDELLVAMARDVERTRDLLER
>NZ_CP013290.1|WP_083546038.1|1135959_1137114_+|rod-shape-determining-protein-RodA
MPGHGRRGFARQLLRSDLVLLAAALIASGLGAVLVHSATRADAGSAYLVRHLLNLVIGLLIALAIVRLDRAALRALAPFVYLAGVVGLVLVLTPLGSEINGSRSWIQVPGGFSIQPSEMAKVGLCVALPMLLAPAAERRDRPRPREILLAGLVTAVPVLLVMAQPDLGSALVLVALALGVLVVSGASWPWLAGVLLAGVAAVVAAFTTPLLSAYQRDRLTAFLDPSADPLGIGYQTQQVRRAIADGGWGGQGLHAGDLTSSGAIPFQETDFVFSVAGEELGFVGAAFVVCLLGLVVARIALAGTRSDDPFVRLVCWAVASWFAVQSVENLGMNLGLLPVTGLPLPFLSYGGSSMFACWAAVGLVVAVTREERSATGRGPVRPRR
>NZ_CP013290.1|WP_072626149.1|1137148_1137607_+|DUF4442-domain-containing-protein
MSKDLGATALRRGLNLWPPFLAASVHVDRISPDFREFDVSLRMRPWSRNYVGTQFGGSLFAMCDPWWMLGALRCLGEDYIVWDKAGEIDFVSLGRTDVRTSIRITDELLDGIRAATADGSKHLVWCDNDVVAADGTLVARYRKQLYVRRKRA
>NZ_CP013290.1|WP_072624218.1|1137742_1139599_+|long-chain-fatty-acid--CoA-ligase
MPDPSPSRASDEVFDASVFDNRAPSVGHLLRDRIAKSPDNIAYSFPSGIAWGELTWAQLGERVWALAAGLVDLGVQPEDRVSLASSTRIEWVLADYAIMAAGAATTTIYPTSISDDVAFIVDNSGSTVIIAEDAEQVDKLREVRDAIPGVSTVVVVDTEGVDLDDWVISFEDLEARGAALLASEPGVVDTRIDGTGPTSLATIIYTSGTTGRPKGVRLRHATWTYQGAAIRATGMLAEDDVHYLWLPLSHVFAKVLLLISTDVGMQTAVDGRIDKIVDNLGEVRPTFMAAAPRIFEKVYGKLSLGMQEEGGAKAKIFDFAAETARQYSQALSDGRKPGALLGVRHKIADKLVFAKVRDRFGGRVRFFISGSAALNTDIAHWFNGAGLPILEGYGLTETSAAATVNRPYALRVGTVGWPNVQTEIKVAEDGEILVRGEHVMEGYHNNPEATAEVLTEDGWFHTGDIGEIDGDGFVKITDRKKDLFKTSNGKYVAPSQIESTFKGLCPYVGQLLVHGENRQFVTALITLDEEAIKPWAEANGLADASYTEIVSSMQAREMVQSYVDELNAGLNRHEQIKRFHILGRDLTVEDGELTPSLKLRRKVVADKFKGDIEEMYPS
>NZ_CP013290.1|WP_072624219.1|1139666_1141646_+|TIGR03960-family-B12-binding-radical-SAM-protein
MSGESIFPALEPLLERVSKPIQYVGGELNSTVKDWHVGGHGPDGQDLTVRWALMYPDVYEVGVPNQGVMILYEVLNERPDALAERSYAVWPDMEALLREHGLPQFTVDGHRPIGDFDVFGLSFSTELGYTNMLTALDLAGIPLHAADRGDEHPIVVMGGHASFNPEPVADFIDAAIVGDGEEAVLAATDIIAEWKAQGRPGGRVEVLRRLAATGGVYVPAFYEVDYLPDGRIQRVAPVETGVPWRVDKHTVMDLDAWPYPKKPLVPLAESVHERMSVEIFRGCTRGCRFCQAGMITRPVRERSITGIGEMVERGLEATGFEEVGLLSLSSADHTEIGDIAKGLADRYEGTNTGLSLPSTRVDAFNIDLANELTRNGRRSGLTFAPEGGSERIRKVINKMVTEDDLIKTVSAAYGAGWRQVKLYFMCGLPTETDEDVLQIAEVAKRVIETGRQVAGHNDIRCTVSIGGFVPKPHTPFQWAAQLGAEGTDERLHKLRDAIRADKRYGRSIGFRYHDGKPGIVEGLLSRGDRRVGRVIEQVWRDGGRFDGWSEHFSYDRWMAAAETALAGTGVDVAWYTTREREEAEVLPWDHIDSGLDKEWLWQDWLDAVDETEVEDCRWTPCFDCGVCPQMGTDIEIGPTGKTLLPLTVLGSGRQDMISS
>NZ_CP013290.1|WP_125932790.1|1141731_1141920_+|hypothetical-protein
MSVQTGAMVVGAVAVIYGIGFAVLPMRRWSESSRTRYTMGGAALVALVFVALVVVPWWVQRS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013290_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013290_2

1552161-1552252

Orphan

Consensus_repeat	Method
CCACTATGCCGTTGCTCCGTACGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP013290_2

>merge|NZ_CP013290|2|1552161-1552252|CRISPRCasFinder
CCACTATGCCGTTGCTCCGTACGACGAGCGGCTGGGCCGTCGCCGGCAGGCACCCACCGGCTCCATCCACTACGCCGTTGCTCCGTACGACG

>NZ_CP013290|2|2|1552161-1552252|CRISPRCasFinder
CCACTATGCCGTTGCTCCGTACGACG	AGCGGCTGGGCCGTCGCCGGCAGGCACCCACCGGCTCCAT
CCACTACGCCGTTGCTCCGTACGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013290.1\|WP_072624532.1\|1557671_1558796_+\|prephenate-dehydrogenase	unknown	unknown	gnl\|CDD\|235824
NZ_CP013290.1\|WP_072624522.1\|1541424_1541727_+\|preprotein-translocase-subunit-YajC	unknown	unknown	gnl\|CDD\|376903
NZ_CP013290.1\|WP_083546080.1\|1561419_1561776_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP013290.1\|WP_072624530.1\|1556077_1556764_+\|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl\|CDD\|377219
NZ_CP013290.1\|WP_072626187.1\|1540179_1541283_+\|Holliday-junction-branch-migration-DNA-helicase-RuvB	unknown	unknown	gnl\|CDD\|234619
NZ_CP013290.1\|WP_072624533.1\|1558818_1559517_+\|(d)CMP-kinase	unknown	unknown	gnl\|CDD\|234579
NZ_CP013290.1\|WP_072624534.1\|1559591_1561073_+\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|179525
NZ_CP013290.1\|WP_072626188.1\|1544867_1545410_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP013290.1\|WP_072626192.1\|1555182_1556085_+\|segregation/condensation-protein-A	unknown	unknown	gnl\|CDD\|224273
NZ_CP013290.1\|WP_072626189.1\|1547743_1549057_-\|DUF349-domain-containing-protein	unknown	unknown	gnl\|CDD\|377186
NZ_CP013290.1\|WP_072624527.1\|1549874_1551251_+\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586
NZ_CP013290.1\|WP_072624525.1\|1545419_1547708_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP013290.1\|WP_072626190.1\|1552550_1553213_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP013290.1\|WP_072624531.1\|1556763_1557675_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP013290.1\|WP_072624524.1\|1543617_1544865_+\|protein-translocase-subunit-SecF	unknown	unknown	gnl\|CDD\|237275
NZ_CP013290.1\|WP_072624526.1\|1549173_1549875_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP013290.1\|WP_072624523.1\|1541728_1543621_+\|protein-translocase-subunit-SecD	unknown	unknown	gnl\|CDD\|235615
NZ_CP013290.1\|WP_072624529.1\|1553324_1554236_+\|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|234713
NZ_CP013290.1\|WP_072624528.1\|1551266_1551809_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP013290.1\|WP_083546293.1\|1554340_1555186_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293

Protein	Function_ID	Function_description	E-value
NZ_CP013290.1\|WP_072624532.1\|1557671_1558796_+\|prephenate-dehydrogenase	gnl\|CDD\|235824	PRK06545, PRK06545, prephenate dehydrogenase; Validated.	9.42838e-114
NZ_CP013290.1\|WP_072624522.1\|1541424_1541727_+\|preprotein-translocase-subunit-YajC	gnl\|CDD\|376903	pfam02699, YajC, Preprotein translocase subunit. See.	4.77205e-22
NZ_CP013290.1\|WP_083546080.1\|1561419_1561776_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.29612e-12
NZ_CP013290.1\|WP_072624530.1\|1556077_1556764_+\|SMC-Scp-complex-subunit-ScpB	gnl\|CDD\|377219	pfam04079, SMC_ScpB, Segregation and condensation complex subunit ScpB. This is a family of prokaryotic proteins that form one of the subunits, ScpB, of the segregation and condensation complex, condensin, that plays a key role in the maintenance of the chromosome. In prokaryotes the complex consists of three proteins, SMC, ScpA (kleisin) and ScpB. ScpB dimerizes and binds to ScpA. As originally predicted, ScpB is structurally a winged-helix at both its N- and C-terminal halves. IN Bacillus subtilis,one Smc dimer is bridged by a single ScpAB to generate asymmetric tripartite rings analogous to eukaryotic SMC complex ring-shaped assemblies.	6.68405e-64
NZ_CP013290.1\|WP_072626187.1\|1540179_1541283_+\|Holliday-junction-branch-migration-DNA-helicase-RuvB	gnl\|CDD\|234619	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB.	0
NZ_CP013290.1\|WP_072624533.1\|1558818_1559517_+\|(d)CMP-kinase	gnl\|CDD\|234579	PRK00023, cmk, (d)CMP kinase.	1.99336e-68
NZ_CP013290.1\|WP_072624534.1\|1559591_1561073_+\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|179525	PRK03003, PRK03003, GTP-binding protein Der; Reviewed.	0
NZ_CP013290.1\|WP_072626188.1\|1544867_1545410_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	3.71863e-82
NZ_CP013290.1\|WP_072626192.1\|1555182_1556085_+\|segregation/condensation-protein-A	gnl\|CDD\|224273	COG1354, scpA, Rec8/ScpA/Scc1-like protein (kleisin family) [Replication, recombination, and repair].	3.37526e-46
NZ_CP013290.1\|WP_072624529.1\|1553324_1554236_+\|site-specific-tyrosine-recombinase-XerD	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	3.65399e-135
NZ_CP013290.1\|WP_072624527.1\|1549874_1551251_+\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	9.18071e-119
NZ_CP013290.1\|WP_072624525.1\|1545419_1547708_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP013290.1\|WP_072626189.1\|1547743_1549057_-\|DUF349-domain-containing-protein	gnl\|CDD\|377186	pfam03993, DUF349, Domain of Unknown Function (DUF349). This domain is found singly or as up to five tandem repeats in a small set of bacterial proteins. There are two or three alpha-helices, and possibly a beta-strand.	1.04799e-13
NZ_CP013290.1\|WP_072624531.1\|1556763_1557675_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	1.78066e-92
NZ_CP013290.1\|WP_072624524.1\|1543617_1544865_+\|protein-translocase-subunit-SecF	gnl\|CDD\|237275	PRK13022, secF, protein translocase subunit SecF.	3.43113e-98
NZ_CP013290.1\|WP_072624526.1\|1549173_1549875_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	1.08262e-54
NZ_CP013290.1\|WP_072624523.1\|1541728_1543621_+\|protein-translocase-subunit-SecD	gnl\|CDD\|235615	PRK05812, secD, preprotein translocase subunit SecD; Reviewed.	9.86621e-91
NZ_CP013290.1\|WP_072624528.1\|1551266_1551809_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.41205e-06
NZ_CP013290.1\|WP_083546293.1\|1554340_1555186_+\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	5.04691e-83

>NZ_CP013290.1|WP_072624528.1|1551266_1551809_-|helix-turn-helix-transcriptional-regulator
MSTPRGYAHPSKAAELDRARAGLSIADRVGLLSRRHRRLHHLSQRDMAAEIGWSRSSLGRLESDAGALTVAKVDGLLRHIGFRLALLPVDPAPPDPEEPDPEPPDPVATAMPIPRPPGLVGAEPPSTWWGAEDLLARDAGSRRPPPDAQVTWHTAQELREDSTLKGRAWTWRRPQRGSAA
>NZ_CP013290.1|WP_072624527.1|1549874_1551251_+|histidine--tRNA-ligase
MNDRATAPRPTKVTPLSGFPEYLPEQRVVEQHFIDVIRSTFELHGFPSIETRAVEPVERLLGKGGDADKEIYGIHRLAEDEGGSAAGREGQLGLHFDLTVPFARYVVENAGRLNFPFRRHQIQKVWRGERPQEGRYREFTQCDIDVVDAGELAPHFEAEMPLVMAEIFAKLPIPQMVIQVNNRKIPEGFYRGLGIDDVAGTLRIVDKLDKVGPDKVVALLVEAGRTPEQAQACLDLAAIRTEDTSFVERVRALGVEHEVLDEGLAALAAVIETGAAAAPGAMVADLRIARGLDYYTGTVYETQLVGYESWGSFCSGGRYDELASDGRTTYPGVGISIGLSRLLGLLLGKGLVGASRKSPSAVLVAVTDEETRARSVAVATALRARGIPCEVAPAAAKFGKQIRFAERRGIPYVWFPGAAEGDGDQVKDIRSGEQSDADAASWECPAQDLRPQVVALEG
>NZ_CP013290.1|WP_072624526.1|1549173_1549875_+|MBL-fold-metallo-hydrolase
MLTVSFPAQAFGTNCYVLADAPGEECVIVDPGIGIEETLREVLTTHRLKPAAVLLTHGHVDHVFSVTPVCGGELAAYIHTDDRYRLADPLSSSSLGPALSGMLEQQFGKQVTWREPETVVEITDSERLTVAGLELEVAHAPGHTEGSVVFGMSRVPDGVPDEAEVDRTLITGDVLFAGSIGRTDLPGGSDAAMQDSLRRVVHPRPDSSLVLPGHGPATTLGREKATNPYLQGL
>NZ_CP013290.1|WP_072626189.1|1547743_1549057_-|DUF349-domain-containing-protein
MAPHPSVTPAPEVPAVTDDHSASAAFGRADEEGRVFVREGDGEREVGSYPGATPDEALQYFARKYDELFASATLLRQRLDSHDVSAKEIADGLKSLREHAEQPNVVGDLPALATVIGELEEGLTAKRQTETAERAEAKKVAAAEREKIVAEAEQIAAQHVDKVQWKQSTARMRALLDEWKAHQRGKVRLDKDVESALWQRFSKARNGFDKARRSHFAHLEQSRGESKAIKQDLVEQAERLSTSTDWNATAGAYKRLMDEWRRAGRAGRADDDRLWERFRTAQDTFFNAKDAEAAKEDEAHRGNLEVKESLLAEAEALLPVKDLDKTKAALRGIQERWEAAGKVPRADIDRMEKGMRRVEQTVREAEDKKWASSNPELSARASSMVTQLEAKVAELRADAEAAEANGDASRAAKLREQLDAQQAWLDQARKGLDEFGG
>NZ_CP013290.1|WP_072624525.1|1545419_1547708_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MSERNTGSSGFSPRSLARASLARIGSGRAATPGVLDPLLQIVRQNHPKADVSIIERAYAVAERAHRGQVRKSGDPYITHPLAVTTILAELGMTPVTLAAALLHDTVEDTDYSLEDLEEEFGAEVAKLVDGVTKLDKVTYGDNAQAETVRKMIVAMARDIRVLVIKLADRLHNARTWRYVSPASAQRKAQETLEIYAPLAHRLGMNTIKWELEDLSFATLYPKVYEEIVRLVAERAPAREEYLTTVRSQVVTDLREARIKAVVTGRPKHYYSVYQKMIVGGREFGEIYDLVAVRVLVDTVRDCYAALGALHARWNPLPGRFKDYISLPKFNMYQSLHTTVIGPQGKPVEIQIRTHQMHRRAEYGVAAHWKYKDQGSPDGGRVDDGQVGEMAWLRQLLDWQKETSDPSEFLDSLRYEINTQEVYAFTPKGQVIALPAGATAVDFAYAVHTEVGHRCIGARVNGRLVPLDSPLDNGDAVEILTSKAEGAGPSRDWLNFVRSARARNKIKHWFTKERREEMVDAGKEAIAKVVRKQNLPLHRILTVESLTAVASELRRQDVDGLYAAVGEGHVSAQHVVSRLIATAGGEDGATEDLAEATMPGPVGRPRSTNDPGVVVKGVDDLWVKLAKCCTPVPGDEIMGFITRGNGVSVHRVDCPNASSLKKEAERLIEVEWAPSSTSLFLVQVQVEALDRAGLLSDVTRVLSETGVNILSAAVHTSRDRVAVLRFTFEMGDVAHLSHVMDQVKRIESVFDCFRITGGSSKKG
>NZ_CP013290.1|WP_072626188.1|1544867_1545410_+|adenine-phosphoribosyltransferase
MPTREVDATLRNRILDALRDIPDFPEPGVTFKDITPLLADAVLFADVVAEHARPWAGRVDAVAGLEARGFIFGAAVAVHLGVGFVPVRKAGKLPGRTVGLDYDLEYGSARIEVHDDAIAPGARVLVVDDVLATGGTAAAACRLLESCGAEVPGVEVLVEIAALGGRTALTGRDVRSLVTV
>NZ_CP013290.1|WP_072624524.1|1543617_1544865_+|protein-translocase-subunit-SecF
MSRMAQWGNDLYTGDRSIDFVGKSKTWYIASAVIMAIAALGFVVQGLNLSLEFTGGSEFRVVTQGAPASYEDDATSAVREVAGGSASANVTTIGGDTIRVQTEELDGDESREVARELASTFGVPQSEVSSNFIGPSWGASVSQQALRALVVFLVITTALMALYYRNWKMAVASMVALAHDMVITVGIYTWTGFEVSPATLIGFLTVLGYSLYDTVVVFDHVKENTRAAFQNKRSTFAHAANLAVNQTLVRSINTTVIAVLPIVAVLIIGFAKLGPGTLLDLSLALFIGMTVGAFSSVFIATPLLVDLRRKDPEVVALDKAAGKHHKASAVRERVPAGASAGAGAAAGSAAGGADDGSAVTEAPSRATSTTEGTSPSSSEESGEGQTVTGRKVHKYAQSGPRNQPKKTARNGRGKG
>NZ_CP013290.1|WP_072624523.1|1541728_1543621_+|protein-translocase-subunit-SecD
MAQRRRTQDVARKDNAKRTLMWLFAFIIMLTGALGYGVWKKDASWTPALGLDLEGGFQFILSPRSTDGGSVSQQQLEEARDIIVQRIDAQGTSGAEVTTQGSSNIVVAMPGVPTKEQQDAIAASSQMQFRPVLATDIGDPEAAQPQPSASSSSGSGSSGSGSSSSSSSSAQPSASRSSSTPASRNQERTAEPTPSSSGSESGTSSPSSSASAPSSSSTAAPTGTDPSADSWKPTGEPTSATDPNHISTKLWREFQDLNCANPPEDQPVGKTDEAIVACKDDGSLKYVLGPVVVAGTEIADAEAGYRVGPQGQQTNEPEIQLTLTSKGRKEYGDISKEMVKLPGLNPANPTNPPGSYNALAAVLDSKVLIDPGFNEAIPNGQASISGFSIDEARSLAKSLKFGALPLSFDVQSRQEISPTLGSEQLRYGIIAGLIGLFVVLLYSLLQYRALSVVVIGSMLVAFGITYLAIALLAWGYNYRLDMAGVTGLIIAIGVTADSFIVYFERVRDELREGRNLRAAVEAGWARAKGTILVADGVNLIAAVVLYVLASSGVRGFAFTLGLTTLIDLAIFWLFTHPLLTILARNKFFASGHKWSGFDVDTLREAKVRYKGRGNFDIDNPVAVPAEGSAR
>NZ_CP013290.1|WP_072624522.1|1541424_1541727_+|preprotein-translocase-subunit-YajC
MNQGSQTASLILLILPLVLIGFMLWSARRRQKTMADFSASLQVGEEVVTTSGIFGRITEVEDDRVRLEVAPGTVLTIDRRAIGAKETPSGDATIDPDGQD
>NZ_CP013290.1|WP_072626187.1|1540179_1541283_+|Holliday-junction-branch-migration-DNA-helicase-RuvB
MRVADDEDPRAGDGSYDATARIVDAGGTDDDTTVEAALRPRRLDEFPGQPKVRDQLGLVLEAARRRGAAPDHVLLSGPPGLGKTTLAMIVAAELEQPIRVTSGPAIQHAGDLASVLSSLSEGEVLFLDEIHRMSRPAEEMLYLAMEDFRVDVVVGKGPGATAIPLELPPFTVVGATTRAGLLPAPLRDRFGFTGHLDFYEVADLERILARSARLLGVTADDDALAEIALRSRGTPRIANRLLRRVRDWAQVHGTGQVDVNAAQAALALFDVDEAGLDRLDRAVLDALCRRFGGGPVGLSTLAVAVGEETDTVETVAEPYLVRQGYIVRSPRGRIATPAAWQHLGLTPPAGEQVGLPFVDGPDTGRLG
>NZ_CP013290.1|WP_072626190.1|1552550_1553213_-|hypothetical-protein
MKLYADLPARRTGQLVADALMLVWVLVWARIGVAVHDTTMQLAEPGRRLESAGSGFKERLESAGDNVDDLPILDDRVADPFRDAAGAGTSIEDAGHDLVDAVGRLATTLGWVTALTPVLIVGTFWIAARLRFVRRATAAQSLVDHVDDLDLFALRAMANQPLQRLSRISPDPAGAWRRGDVDVIHELALLELADCGLRPPPGAGHRGPGHSGPDGSGSRT
>NZ_CP013290.1|WP_072624529.1|1553324_1554236_+|site-specific-tyrosine-recombinase-XerD
MERAVRTWLTQLDVERGVSAHTLAAYTRDARRYVAHLAEQGITAPGDVTELHVSGFLASLRAGDDEHPPLAATSAARTLVAVRGLHKFLALEGETAHNPAQDVAPPAPPSRLPKAIGRDEVTRLIDAAGVGDGAIPLRDQALLEVLYGTGARISEAVGLDLDDLDLDIGAARLLGKGGKERVVPLGSYAVDAVRAWLVRGRPELSAKGKAGPALFLNRRGARLSRQSAWEVITTAAGRADLSGHVSPHTLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTMVTVDQLREVYAQSHPRAR
>NZ_CP013290.1|WP_083546293.1|1554340_1555186_+|ParA-family-protein
MAQPGPTGRPMPSFPEPPPLASHGPARIIAMCNQKGGVGKTTTTINLGAALAEAGRRVLLVDFDPQGALSVGLGVPTHTLDLTIYDLLVSRGHEITEIIQHTSVEGLDVAPANIDLSAAEVQLVGEVAREQILTRVLRPVVDDYDVILIDCQPSLGLLTVNALTAAHGVIIPLETEYFAMRGVALLVETIDKITDRLNPGLTIDGILATMFDGRTLHSREVVGSVVEHFGDKVFHTVISRTVKFPDATLAAEPITTYATGHSGANAYRQLARELISRGGAP
>NZ_CP013290.1|WP_072626192.1|1555182_1556085_+|segregation/condensation-protein-A
MTTVEAVPGGVITKRGAEQAFTVHLDNFEGPFDLLLGLISKHQLDITEIALARVTDEFMAHLRALQASEPSWDLGQTSEFLLVAATLLDIKAARLLPNTGDGDEEDLELIEARDLLFARLLQYRAFKDVAAHLGETMQATGRMTARQAGLEPHLAQLLPELVISITPEQLAMIAARALTPKEPETVGLTHLHAPAVSVREQAVVVVDRLRSEGTTSFRALVRDADSTLVVVARFLALLELFRDKQVVFDQPEALGDLEVSWTGSDEGTVDVGAEFDEGEAAPPSPEQDEQDERVVEDNDD
>NZ_CP013290.1|WP_072624530.1|1556077_1556764_+|SMC-Scp-complex-subunit-ScpB
MTEPDAPIPETASEVAAEALELESLEPDGVEPEGDDVQVAFDVGELPGGARAAIEAVLMVVEEPVTDHALASALELPVEEIREVLDDLERHYGDGTHGFTVRNVGGGWRFYSHHAYAPVVERFVLDGQQSRLTGASLETLAVVAYRQPISRARISAVRGVNVDGVVRTLLTRGLIIEVTKDEESGATLYGTTPYFLERMGLNSLDDLPPIAPYLPDASVLDELVNEAR
>NZ_CP013290.1|WP_072624531.1|1556763_1557675_+|rRNA-pseudouridine-synthase
MTPPRNRRPGGPQGAPRGTGPKKPPRPGRRPQPDRGTTGRSRKGQPDLAPEPPRLPTIDVHDPEGTRLQKVLAAAGVGSRRACELLIAEGRVEVDGQVVTELGVRVDPLRQTVHVDGERIQLDESRVYLAFNKPAGVVTTMSDELGRLNIGDYVAGRPERLFHVGRLDADTEGLLILTNDGDLAHRLQHPAHGVLKTYIAEIPGPVPKDLGKTLRAGVELDDGPVQVDSFRIVDSKPGKAIVEVILHEGRKHIVRRLLEHVGHPVISLVRTQVGPITLGSTKSGRWRPLSQREISDLYKAAGL
>NZ_CP013290.1|WP_072624532.1|1557671_1558796_+|prephenate-dehydrogenase
MTASTEAKGAASALPPVHVIGTGLIGASIGLALTAAGADVTLEDQSETSVSLARDLGAGRISADVAPGVVVVAAPPDVTPRLVVAALQRWPEAVVTDVASVKQVILADLVRAGVAIERYVGSHPMAGRERSGAISARADLFEGRAWVLCPHEGTDPAATQVVSRLARATGAAVTTLSPADHDAAVAAVSHAPQVAASLVAARLEHLSEQAVGLAGQGVRDVTRIAASDPGLWTQILSGNAGAVAQVLRAMSQDLVGIVEALEALSTDPHVADAPGARAVLARSIADGNAGHARIPGKHGAPPAAYAVVRVVVDDRPGEVARLLTEIGEEGVNMEDLRLDHGLGLPFGVAEISVLPAAAGPLTEALQTRGWQIHS
>NZ_CP013290.1|WP_072624533.1|1558818_1559517_+|(d)CMP-kinase
MTSPPAPFVIGIDGPSGSGKSSVSRAVAARLGAGYLDTGAMYRALTWWCRHTEVDLGDADAIVAAALGLPLEIGDDPQAPTVAVDGIDVAAAIRTSEISSLVSTVATVPEVRVEMQLRQRALIDDFAVRHGACVAEGRDVTTVIAPDAQVRILLTASEEARLRRRSLEVHGATDEAAIAATRDQVVRRDRDDSTVSQFTEAAEGVTVVDTSDLDFEASVAAVMDVVAAARAS
>NZ_CP013290.1|WP_072624534.1|1559591_1561073_+|ribosome-biogenesis-GTPase-Der
MVDTTEPTAPHGDDESAEGVERVLRAGLEDFELTPEDRAIIDGFQPDEEEHAAGPLPVVAIVGRPNVGKSTFVNRVLRRREAVVEDTPGVTRDRVAYDAEWAGRRFTLLDTGGWEIGAEGIHLRVAEQAEVAIEMADVVVFVVDAIVGATDDDEAVVRLLRKSGKPVVLVANKVDDQRFEADAAALWNLGLGEPLPVSALHGRGSGDALDAVLDVMPEASASGKALPEGGPRRVALIGRPNVGKSSLLNKLAGEERVVVDDFAGTTRDPVDEIIELGGRSWRFVDTAGIRRRVHQTKGADFYASLRTQAALEKAEVAVVLIDTHESITEQDLRIISQVVEAGRALVIAYNKWDMLDEERRFYLEREIERELVQTQWAPRVNMSALTGRHVDRLTPALDTALDSWDTRVPTSRLNAVLGEIASAHPHPVRSGKQPRVLFATQASTRPPRFVIFASGFIEAGYRRFLERRLREEFGFEGTPIEISVRVREKRRRR
>NZ_CP013290.1|WP_083546080.1|1561419_1561776_+|helix-turn-helix-transcriptional-regulator
MAETAETTHRDPTPFERALLQRRRRTAEPLWREALGERLRGLRHKRGDTLDETAERAGISMQYLSEIERGRKEPSSEMIAAVAGALDVTLLDLTLSVAESLQAPNRTRGSASALALAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP013290_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP013290_3

3192832-3193084

Orphan

Consensus_repeat	Method
CTGGATGTTGCCGTCGACG	CRT

4 spacers

The CRISPR arrays of NZ_CP013290_3

>merge|NZ_CP013290|3|3192832-3193084|CRT
CTGGAGGTTGCCGTCGACGCGGTTGGAGTAGATGCTCTTGTAGCCGGAGCGGTTGCTGAAGACCTGGATGTCGCCGTCGACGATGTTGCGGTTGAGGGTCAGACCGCGACCCTGCTCGAGCTGGATGTTGCCGTCGACGCGCGAGTCCTCGACCTTGACCCACAGGTGACCCTGGGACTGGATGTTGCCGTCGACGTTGATCCGCGCGGCGGTGAACTTCGCGCCGGACTGGACCTTGATGTTGCCCTTGACC

>NZ_CP013290|3|1|3192832-3193084|CRT
CTGGAGGTTGCCGTCGACG	CGGTTGGAGTAGATGCTCTTGTAGCCGGAGCGGTTGCTGAAGAC
CTGGATGTCGCCGTCGACG	ATGTTGCGGTTGAGGGTCAGACCGCGACCCTGCTCGAG
CTGGATGTTGCCGTCGACG	CGCGAGTCCTCGACCTTGACCCACAGGTGACCCTGGGA
CTGGATGTTGCCGTCGACG	TTGATCCGCGCGGCGGTGAACTTCGCGCCGGACTGGAC
CTTGATGTTGCCCTTGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP013290.1\|WP_072625889.1\|3201119_3201890_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NZ_CP013290.1\|WP_072625888.1\|3197614_3198409_+\|GTPase-domain-containing-protein	unknown	unknown	gnl\|CDD\|206648
NZ_CP013290.1\|WP_072625874.1\|3179730_3180360_+\|DUF305-domain-containing-protein	unknown	unknown	gnl\|CDD\|367619
NZ_CP013290.1\|WP_072625881.1\|3186858_3190266_+\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273172
NZ_CP013290.1\|WP_072625883.1\|3192245_3192731_-\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|119345
NZ_CP013290.1\|WP_072625879.1\|3182826_3183378_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP013290.1\|WP_072625887.1\|3195465_3196491_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_CP013290.1\|WP_094078913.1\|3199705_3201082_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP013290.1\|WP_072625876.1\|3180788_3181016_-\|antitoxin	unknown	unknown	unknown
NZ_CP013290.1\|WP_094078855.1\|3183376_3186862_+\|exodeoxyribonuclease-V-subunit-gamma	unknown	unknown	gnl\|CDD\|273633
NZ_CP013290.1\|WP_072625875.1\|3180411_3180792_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350221
NZ_CP013290.1\|WP_072625882.1\|3190262_3192119_+\|exodeoxyribonuclease-V-subunit-alpha	unknown	unknown	gnl\|CDD\|273631
NZ_CP013290.1\|WP_072626379.1\|3197391_3197613_+\|mycoredoxin	unknown	unknown	gnl\|CDD\|131255
NZ_CP013290.1\|WP_072625885.1\|3193470_3194265_-\|peptidase-M16	unknown	unknown	gnl\|CDD\|239806
NZ_CP013290.1\|WP_072625890.1\|3201889_3203146_-\|glutaminase	unknown	unknown	gnl\|CDD\|377427
NZ_CP013290.1\|WP_072626378.1\|3196595_3197273_+\|sprT-domain-containing-protein	unknown	unknown	gnl\|CDD\|214794
NZ_CP013290.1\|WP_094078856.1\|3198440_3199709_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225139
NZ_CP013290.1\|WP_072625878.1\|3182069_3182774_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270341
NZ_CP013290.1\|WP_072625886.1\|3194512_3195319_-\|matrixin-family-metalloprotease	unknown	unknown	gnl\|CDD\|239806
NZ_CP013290.1\|WP_083546223.1\|3181069_3182041_+\|threonine/serine-dehydratase	unknown	unknown	gnl\|CDD\|107205

Protein	Function_ID	Function_description	E-value
NZ_CP013290.1\|WP_072625889.1\|3201119_3201890_-\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	6.33104e-09
NZ_CP013290.1\|WP_072625888.1\|3197614_3198409_+\|GTPase-domain-containing-protein	gnl\|CDD\|206648	cd00882, Ras_like_GTPase, Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases). Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulates initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Members of the Ras superfamily are identified by the GTP binding site, which is made up of five characteristic sequence motifs, and the switch I and switch II regions.	3.91546e-05
NZ_CP013290.1\|WP_072625874.1\|3179730_3180360_+\|DUF305-domain-containing-protein	gnl\|CDD\|367619	pfam03713, DUF305, Domain of unknown function (DUF305). Domain found in small family of bacterial secreted proteins with no known function. Also found in Paramecium bursaria chlorella virus 1. This domain is short and found in one or two copies. The domain has a conserved HH motif that may be functionally important. This domain belongs to the ferritin superfamily. It contains two sequence similar repeats each of which is composed of two alpha helices.	6.63372e-46
NZ_CP013290.1\|WP_072625881.1\|3186858_3190266_+\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|273172	TIGR00609, RecBCD_enzyme_subunit_RecB, exodeoxyribonuclease V, beta subunit. The RecBCD holoenzyme is a multifunctional nuclease with potent ATP-dependent exodeoxyribonuclease activity. Ejection of RecD, as occurs at chi recombinational hotspots, cripples exonuclease activity in favor of recombinagenic helicase activity. All proteins in this family for which functions are known are DNA-DNA helicases that are used as part of an exonuclease-helicase complex (made up of RecBCD homologs) that function to generate substrates for the initiation of recombination and recombinational repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP013290.1\|WP_072625883.1\|3192245_3192731_-\|ASCH-domain-containing-protein	gnl\|CDD\|119345	cd06553, ASCH_Ef3133_like, ASC-1 homology domain, subfamily similar to Enterococcus faecalis Ef3133. The ASCH domain, a small beta-barrel domain found in all three kingdoms of life, resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, RNA-processing and the regulation of prokaryotic translation.	2.39302e-56
NZ_CP013290.1\|WP_072625879.1\|3182826_3183378_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.48407e-20
NZ_CP013290.1\|WP_072625887.1\|3195465_3196491_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	4.07187e-143
NZ_CP013290.1\|WP_094078913.1\|3199705_3201082_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	3.24401e-36
NZ_CP013290.1\|WP_072626378.1\|3196595_3197273_+\|sprT-domain-containing-protein	gnl\|CDD\|214794	smart00731, SprT, SprT homologues. Predicted to have roles in transcription elongation. Contains a conserved HExxH motif, indicating a metalloprotease function.	2.80101e-13
NZ_CP013290.1\|WP_094078855.1\|3183376_3186862_+\|exodeoxyribonuclease-V-subunit-gamma	gnl\|CDD\|273633	TIGR01450, recC, exodeoxyribonuclease V, gamma subunit. This model describes the gamma subunit of exodeoxyribonuclease V. Species containing this protein should also have the alpha (TIGR01447) and beta (TIGR00609) subunits. Candidates from Borrelia and from the Chlamydias differ dramatically and score between trusted and noise cutoffs. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP013290.1\|WP_072625875.1\|3180411_3180792_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350221	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Pyrobaculum aerophilum proteins, Pae0151 and Pae2754, and homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	6.01935e-25
NZ_CP013290.1\|WP_072625882.1\|3190262_3192119_+\|exodeoxyribonuclease-V-subunit-alpha	gnl\|CDD\|273631	TIGR01447, recD, exodeoxyribonuclease V, alpha subunit. This family describes the exodeoxyribonuclease V alpha subunit, RecD. RecD is part of a RecBCD complex. A related family in the Gram-positive bacteria separates in a phylogenetic tree, has an additional N-terminal extension of about 200 residues, and is not supported as a member of a RecBCD complex by neighboring genes. The related family is consequently described by a different model. [DNA metabolism, DNA replication, recombination, and repair].	2.47539e-150
NZ_CP013290.1\|WP_072626379.1\|3197391_3197613_+\|mycoredoxin	gnl\|CDD\|131255	TIGR02200, conserved_hypothetical_protein, Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.	1.14034e-28
NZ_CP013290.1\|WP_072625885.1\|3193470_3194265_-\|peptidase-M16	gnl\|CDD\|239806	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.	9.14169e-15
NZ_CP013290.1\|WP_072625890.1\|3201889_3203146_-\|glutaminase	gnl\|CDD\|377427	pfam04960, Glutaminase, Glutaminase. This family of enzymes deaminates glutamine to glutamate EC:3.5.1.2.	2.26107e-161
NZ_CP013290.1\|WP_094078856.1\|3198440_3199709_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225139	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].	3.60767e-119
NZ_CP013290.1\|WP_072625878.1\|3182069_3182774_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270341	cd13623, PBP2_AA_hypothetical, Substrate-binding domain of putative amino-acid transport system; the type 2 periplasmic binding protein fold. This putative amino acid-binding protein belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.28059e-65
NZ_CP013290.1\|WP_072625886.1\|3194512_3195319_-\|matrixin-family-metalloprotease	gnl\|CDD\|239806	cd04279, ZnMc_MMP_like_1, Zinc-dependent metalloprotease; MMP_like sub-family 1. A group of bacterial, archaeal, and fungal metalloproteinase domains similar to matrix metalloproteinases and astacin.	6.58361e-14
NZ_CP013290.1\|WP_083546223.1\|3181069_3182041_+\|threonine/serine-dehydratase	gnl\|CDD\|107205	cd01562, Thr-dehyd, Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.	1.06689e-118

>NZ_CP013290.1|WP_072625883.1|3192245_3192731_-|ASCH-domain-containing-protein
MDDIEAFWQRAQQHADLAQVSSYTGVNPLAVLRPPAWGFGATPEQADELLGLVLAGDKTATASALWDYESEGEEVPSEGTLGIVVDGSGTPRALVVTTRVRVVPFDEVDAAHARAEGEGDLTLEYWRRVHEDFFTRHASHDRGFVRDMPVVLEELRVLHAE
>NZ_CP013290.1|WP_072625882.1|3190262_3192119_+|exodeoxyribonuclease-V-subunit-alpha
MTEILDPYDRRVVRSATGELARLNATGVLEAADVHVATRVSELVGETDDLVQVTLALVVRAAREGSTSLDPEHARELLAEAAEESSTPVEGAATDDPVGDTSTEQSGAVGDTSAQQPDAVELPPTPEWLDRVRGSALAEAGVLLVQHDLVYLDRYHREEVQVAEDLRRRATTEAPPVDEPVLEAGLERVFPGDGWGEQRAAVRSAAGRLTTVLAGGPGTGKTSTVAGLLALLLEQAESRGRRPRIALAAPTGKAAARLRESVLGSLGHMPELDRQRLGTDIEAVTVHRLLGWRPDSGNRFKRDRGNPLPHDIVVVDEASMLSLTLTARLLEALRPTARLLLVGDPDQLASVEAGAVLADLVAGYGEDGPVARLQTSHRFGQEIGALAEAVRVGDADRVLELLAAARPGGPVEHVVVHEVLEADEALRPRLLGHAERLRDLALAGEHTAALRELGEHRLLCAHRDGPWGVAPWNDRVERWLAEASEHPGRQVVGRPLLVTTNDRGLGLYNGDTGVLALRADHRVVGVFGEPGAPIVHAASTLGDVDTAHALTIHKSQGSQARSVTVLLPDPDSRLLTRELLYTAITRAQESVTLVGSVEAVRAAVTRRTQRATGLRHRV
>NZ_CP013290.1|WP_072625881.1|3186858_3190266_+|UvrD-helicase-domain-containing-protein
MTATTTGALTPFDITGELPTGTVLLEASAGTGKTWTIGALVARHIAEGVVRLEDMLVITFGRAASREMRERVREHLRHVHRHVADPDLATDDEVIALLRQGTPEEVAERARRLRDALTHFDAATIATTHQFCQLVLRGLGVAGDTDQHARLVEDLSDLRDEVVDDLYVRGFATGGPPAFTRKRAGEIARAVTENPHAELDPSSLEGRSADARSLGFARLVREELDRRKRRLGVLGYDDLLSHLAAALEDEDSPARERMRQRWRVVLVDEFQDTDPVQWQILDRAFSGHSTLVLIGDPKQAIYGFRGGDVDTYLTAAESATTRHTLGVNHRSDGPLVRSLGALLGGAQLGDEQIVVHPVRAAREGSRLGVADGIAPDGLLAPVRLRAVPSARVEQPGQTISIGSVRPLVARDCAAEITRLLAGRTTFDGRPLRAGDVAVLAHTRKQLDEVRTALTAVGLRSVIVSSDSIYDSPAAAHWLTLLEAMELTHRAERVRAAALTPFVGASAGDLDARGDDLTEEIAHRLRTWAALLGRRGVAAVLAAATADGLDARVLARTDGERLLTDLRHIGETLHQRVVTEGEGLASLTAWLRERMAAARKEERARRLDSDADAVHLATIHASKGLQYPVVMLPFVCDRWLPRPDVLHFHRADRTRALDIGITSDERRQERLDRAAAEESGESLRLLYVALTRAQSQVVTWWFPSARNTGPSPLHRILLGRTQGQGEVPRTHPVPGDDTLQDRLADWERRGALRVEYVDDPTAVTMAAPAPVTDLSVRDFTRTVDDAWRRTSYTALTRPLDDVARPTTEDLVASEPEVTDRQDDEGGVRGLDAAASTGSFEPVDDAEAATAGGHRHLPSPMAELPVGAGFGSLVHAVLEEADAQASDLRAELRAQVEEQVVAWPVPDLDRDALADALVEVIDTPLGPLAPGVTLRDVGARDRLCEMDFELPLGGGDAAPEPSADEAVLGDLAALMRAHLPADDPVLPFADVLDDPVLGDQALRGYLTGSVDIVLRIGDRHLVVDYKTNWLGPVDIPLTTAHYDPAALREAMTHSSYPLQAILYGVVLHRFLRWRQPGYDPAVHLGGVLYLYLRGMAGADTPLVDGHPTGVFSWAPPVALIEGVSDLLDGRRPTEGDR
>NZ_CP013290.1|WP_094078855.1|3183376_3186862_+|exodeoxyribonuclease-V-subunit-gamma
MDRVHHGGATPSSTGVLRAVAPCGYGLTVALHLHRAQRTDTLADELGELLASPLPDPFAQEVVVVPEQGIERWLAQRLSHRLGRGEGGQDGVCAGVTFLRPRSLVTMLTGRDEDDPWLPQHLVWPLLEVIDASLGQPWCKALSRHLGHGSDDPDGTRAGRRYSVALRLARLFHRYGQSRPTMLTDWREGRDTDGTGSPLDPDLTWQSELWRRLVSRVEAPPPDVRHAETVERLRGDGDGLELPERLSLFGHTRLAVTEVELLRALGRSRDVHLWLPQPSPDLWERLTPFAEEGLVARESDATSDLVRHPLLASLGRDSRELVRVLGHSEVEERGRPRPSLETGGFEAPSSHLSQRGGGEARSVLEWLQADLRDDDVPDEAERAQRRVVPDDRSIQVHACHGPARQVEVLREVLVGLLEDDPTLEPRDVLVMCPDVETYAPLIGAAFGLGDHGTDADGVDTHPAHRLRVRLADRSLRATNPLLAVADRVVGLAGGRLAASEVLDLAATEPVRRRFGLDDDDLATMTRWVSDSGIRWGYDQAGRAPFALDVEPQGTWRFGLDRLLVGVAVSADGPLQVGDVMPLDDVGSGSVDLVGRVSELLARIGDGLDALEHAGTATEWMDALTEAVLSLTDVPTRERWQVGDLQRTLGSAARHASDEVPLRLADVRVLLADQLAGRPSRASFRTGGLTVCTMTPMRSVPHRVVCLLGMDDDSFPRQQAIDGDDVLARRPITGERDARSEDRQLLLDAVLAARERLVIAYTGADEHSGEPCPPAVPLGELVDAARETTSAPVEVVEHPLQPFDPRNLAPGGPGGERPLSFDRSALLAARAASGERTPPGRLVTAPLPARVITDVGLADLIAFYDNPARGFLRDRLQVGVSHEVDEVSDRLPIDLDGLDKWAIGDRALRARIAGRDPRAIYRAEQLRGSLPPAALGDVTLEEIGRAVEQLMGQLALGPPEDPRSVDIEVTLPGDRRLTGTVDGVRGLHLVDITYSKLGAKQLMAAWIRLLALTAAGADDEGWQASTLGKGFKGKVARTTYGALPRAAARSHLATLLEVHALGQTVPLPLPAKTAHAHAQAISRNPSRTRVAQQQAVGEWEPTILKSGDVIPGERDDAWWRLVHGSEAPFDVLTQPLAGPGSDLATLATRVWGPALDNVGSTA
>NZ_CP013290.1|WP_072625879.1|3182826_3183378_-|GNAT-family-N-acetyltransferase
MTDLRHLTTERLRLDAPTSDDLTELFAIYADPRVWTHFPSLRHTTIEQTGQMIDAWTRAWQAVGLGPWVVRRHDDDTVLGHAGCSPREGWWNLGYRFAAETHGQGLATEAARPALEVAPTVREVPVVAYLLEHNHASWRVADKLGLTLRHRGPDAGNPDPAAVRLVYADRELAADQLAGIMRE
>NZ_CP013290.1|WP_072625878.1|3182069_3182774_-|transporter-substrate-binding-domain-containing-protein
MPTTSDTLRADLCPTGPLRALINLGNPVLVQGTPQQPTGVTVDIAREIAARLGVDVELLPVTAARDAYAALVDGRADLGFLAIEPAREEGVRFTTPYVQIEGVFATRDASLTVADVDRPGTTIATRRGSAYDLYLTRTIEHATIVRGDEVEQAYEGGADVLSGVRQPITAYAQEHGLTVLEPAFQAIRQAVAVPRERPERLVAGLDEIVAELKASGFVAASLERAGQVATVPQD
>NZ_CP013290.1|WP_083546223.1|3181069_3182041_+|threonine/serine-dehydratase
MDFGIETIRAAAERLEGRVRRTPLLSSPMLDELCGATVLVKAEALQLTGSFKIRGALNTLLSLTDAERAAGVLAFSTGNHGQAVAASARMTGSTATIVMPQDAPQIKVDGCRWWGAEVVFYDPATQDREVVGRELVEQRGLTLVHPYDDPRVMSGQGNVGLEIVDQLREGGHSPDAVIVPCSGGGLSSGVITAVRETYPQVAPFVVERDGYPKMARSLASGRVEKVPAVPVFLDAIGSPTVGEHTLAALARHDVTGLEVSDDQARVAMREAVRTLKLVVEPGGSAALAALIAQRQRFAGQTVVVVASGGNVDASVLAEVLAAP
>NZ_CP013290.1|WP_072625876.1|3180788_3181016_-|antitoxin
MPTLYIRDVPDDVAETLKQRAAADGQSLSAYVAGALLRLAERPTNAEVVERLRQVDRTSAPATDEIVSTLHESRR
>NZ_CP013290.1|WP_072625875.1|3180411_3180792_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MIVVDASAMVEALVGRAPDPRLLDALAGVVEAPQHLDVEVLSVLRGLTLGAKLPAARAEEALGAYLDLDITRRDVAPFARRVWSLRHQYTSYDAAYLALAEGLDAPLYTCDRKLAAGGHTAEVVVI
>NZ_CP013290.1|WP_072625874.1|3179730_3180360_+|DUF305-domain-containing-protein
MTPRVVLAAVVALAIGLVAGLALSRVGGDDLPGDDSVAAGFARDMQTHHDQAVEMSWIIYDRTDDSLVRSLAYDIARTQESQSGQMAGWLQVWGLSPTGPGKQMDWMRGLGHEHGATMTLGDDGLMPGMATQAEMTKLKGMRGKAADIYYLQMMIRHHKAGVPMAEAARDNSQNDAVETLAQSIINSQTTEVETMTTMLEERGAKPLAD
>NZ_CP013290.1|WP_072625885.1|3193470_3194265_-|peptidase-M16
MKRVASVLAIAATVSMGAMSVSNAASSDEPTYDDFTSQTYQDADHQYIVNGDIPLSGEKQLREFYQQLVNPQQSDALIINTVYGKDDVWTATQAKNLTYCVSTKFGSDHGRVRDAMASGAAQWEAASSGVNFTYVSSQDKSCTTRNNNVVFSVEPTKTTQYIARAFFPSTAKRSRNVLVSTNQLFNAGSWSPSNILAHELGHALGFRHEHTRPEAGTCFEDKNWRPLTPYDSSSIMHYPQCNGSSDDLSMTAADREGIRSVYGS
>NZ_CP013290.1|WP_072625886.1|3194512_3195319_-|matrixin-family-metalloprotease
MKRTTTRAATVLGLAATLSMGAASLGYADGSDEPTYQEYKASTYQDPTDRQYIVNGDIPLAGEKQLREFYQELVNPQYESQLIVNTVYGKDDIWSASQAQNLTYCVSDSFGSDKAAIVSAMQAGGNQWEAASSGVDFTYDSSQDASCTTRNSNVLFSVEPVSGANYVARAFFPSTATSTRNVLVNTDQIFSSGWSAENVLAHELGHALGFRHEHTRPEAGTCFEDNNWRPLTPYDSSSIMHYPQCNGSSDDLSMTAADREGIRSVYGS
>NZ_CP013290.1|WP_072625887.1|3195465_3196491_-|LLM-class-flavin-dependent-oxidoreductase
MYLVRAVATGVIPKLSLLDLATVGRDQPISEALADTVTLAQRADDLGAFERLWFAEHHNMSSIASAATSVLIAHVASQTRRIRVGSGGVMLPNHSPLVIAEQFGTLAELHPGRIDLGLGRAPGTDGATLRALRTDPRAAEAFPQDVRELQGYLADESIVDGIHAYPGRGTRVPLYILGSSLFGAQLAAAYGLPYAFASHFAPDALEQAVRVYRERFTPSEQLQQPHVIAALNVIAADDSAEAAEARDRVLRARVRMLAGRVGSGGLDEEMVTALLDTNVGAQARHMLTHTVAGDAAEVAQGLADFAALSDADELMVTNPAPLLPQRIRTLEILAGLDDSGS
>NZ_CP013290.1|WP_072626378.1|3196595_3197273_+|sprT-domain-containing-protein
MEIGAAREMARGLMDEHGLQGWQLTFDRAKRRAGVCRPGQRTIGLSWPLTELHDVAQVRDTVLHEIAHALAGPGVGHGPAWRAIAASIGAVPERCLPTEAGTIPGDWVGTCPAGHTIDRHRRPTRVSSCRQCSRGFDPEAIFTWTHHGVPAVMPPSYQRDLATTQLSARREGAGELVAIGDRVRVLTPGRYEGFVGVVVKRGRTRFHVRGRGTLLTVPFDHVEAA
>NZ_CP013290.1|WP_072626379.1|3197391_3197613_+|mycoredoxin
MFSTTWCGYCRRLKSQLDREGIAYTEVNIETTPGTAELVETINGGNQTVPTLLFPDGSSATNPSLADVKKQLA
>NZ_CP013290.1|WP_072625888.1|3197614_3198409_+|GTPase-domain-containing-protein
MARMSSATRTAVGTSIAGGALSALSGAPHQLSHLFRGRFPTVAVTGMTGVGKTRLADRLARRTSAESTVEVGSATMERRTRRMAKGRGFRFRVVPGDNAATRLGALDEVFHDDPVDGVLHVVAWGHATARRTAGTSGEAVATREELLAAELEDWTITAHRIASMALRRDKPVWLVIVVTKTDLFPDEVDEAVRYYSPGSGSPFAAKLDELRSLAGGARLSVDVLPMCTEPGEATDKAARKDAGKRCSAMLTALESRMGQLSGHA
>NZ_CP013290.1|WP_094078856.1|3198440_3199709_-|class-I-SAM-dependent-methyltransferase
MSTIKIADALAGILPADLPVRVTAYDGSAAGPADAPIGLELRTERGLRYLLTAPGDLGMARAWVAGDLTGTGFHPGNLYPLLDLMSSTDRWRVPGPAEALELVRGLGWEHLNPPPPPPQEHLPRWRRVVEGLRHSRARDAEVIHHHYDVSNRFYELVLGPSMTYTCAVYPTADASLEQAQEYKYELIARKLDLKPGQRLLDVGCGWGGMVRHAAKHHGVKALGVTLSREQADWAKRAIDREGLGELAEVRFMDYRDVPESDFDAISSIGLTEHIGVANYPAYFAAMRDKLRPHGRLLNHCITRDHNRSTRTGAFIDRYVFPDGELTGAGTVIARMQDAGLELQHAENFRVHYARTLAGWVDNLVEHWDECVAEVGEGTARLWGLYLVGSRIGFERHDIELTHVLATKTDSSGVSGYPLRHTF
>NZ_CP013290.1|WP_094078913.1|3199705_3201082_-|FAD-binding-oxidoreductase
MIGWQAHEAGVERLVRSHAAIPHGATVRLAKRTSNLFRPRAQTEVPSLDVTGLAGVIEVDPTTRTAQVQGMCTYEDLVAATLPHGLIPLVVPQLRTITLGGAVTGLGIEATSFRNGLPHESVLELDVLTGSGEIVTARPEGEHADLFHAFPNSYGSLGYATRLHIELEEVPSRVALRHLGFDDAHAAAAAIEEIVAAGEHDGERVDALDGVAFAPDEIYLTLARWTDEPGETSDYTGQQIYYRSVRERTSDLLTMHDYLWRWDTDWFWCSGAFGVQHPVVRRLWPRRWRRSDVYHRLVALDRRHGIVDRLDARAGRPRRERVIQDIEVPTDRLADFLEWFDARIGMRPVWLCPLRLREIDGRARTWPGYPLEPGRTYVNVGFWGTVHVGPEAPEGPRNRAIEAEVTALGGHKSLYSEAFYTREDFDRLYGGAQLAAVRRRYDPAGRLTDLYDKVVRTP
>NZ_CP013290.1|WP_072625889.1|3201119_3201890_-|alpha/beta-hydrolase
MLRRLIYPVPAWDPEGGLPVETTAAGTHLVHAPAPEGGRTIVYFHGNGSDLASISPLAGLFARHGLGFAAVEYPGYGPAAGRPHQEAILAAARDGLAHLSLRAERTVLVGESLGSSVAAHLAAEGLLHDGGASKGGGRLVLVSPFTSMTAMVQRVVRVFPRQLVPDRWETDALLERIDVPTLLVHGERDDLVPLAMSEQLARGISSSQRVVVPGRTHNDLWEAPSECLEVVARFATQDLGGAAVEGSTDAGRNPLS
>NZ_CP013290.1|WP_072625890.1|3201889_3203146_-|glutaminase
MRSPLPDYLTEVAEACSATKGGEPASYIPELAKVDPDRFGIALATIDGEVYAVGDAEHEFTIQSISKAFVYGLAVRDHGLEQVLAKIDVEPSGEPFDELSLDASGRPRNPMINAGAITAHTLVGEPDTAPHERVERIIRLLSDLAGRELSVDEDVWRSEVATADRNLAIAHMLRSHGILTDSAEEVVSAYSRQCAVLVTARDLALMAATLANSGVQPVTGKQVFTGAQVRHVMSVMLTCGMYDSAGDWVSSVGIPAKSGVGGGIIGALAGQAGLATFAPPLDAHGNSVRGVETFGRLSRDTGMHLMKVEPPARSVIQSTRVVQRGGESMRIYYLSGTIGFSGAEFVARRLSQDPPEHHAVVLDLTGVHSVTDVGRRMLLETARRLRLDGHEVYLVDTDDVIPDADPGDGRRLPLLADQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP013290_2	2.1\|1552187\|40\|NZ_CP013290\|CRISPRCasFinder	1552187-1552226	40	NZ_CP006993	Methylobacterium sp. AMS5 plasmid pAMS5a, complete sequence	69121-69160	9	0.775

1. spacer 2.1|1552187|40|NZ_CP013290|CRISPRCasFinder matches to NZ_CP006993 (Methylobacterium sp. AMS5 plasmid pAMS5a, complete sequence) position: , mismatch: 9, identity: 0.775

---agcggctgggccgtcgccggcaggcacccaccggctccat	CRISPR spacer
ccgagcgat---gccgtcgcccgcaggcacccagcggctcact	Protospacer
   ****..   ********* *********** ******  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2255516 : 2264840

Saccharomonospora_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072625110.1\|2255516_2257277_-	DEAD/DEAH box helicase	I4AZM6	Saccharomonospora_phage	1.1e-87	37.5
WP_083546125.1\|2257325_2258123_-	thioesterase family protein	NA	NA	NA	NA
WP_072625111.1\|2258131_2258440_-	DUF3039 domain-containing protein	A0A160DF89	Gordonia_phage	1.4e-06	42.5
WP_072625112.1\|2258566_2259124_-	YqgE/AlgH family protein	NA	NA	NA	NA
WP_072626280.1\|2259133_2260870_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.7e-34	28.6
WP_072626281.1\|2261140_2261512_-	hypothetical protein	NA	NA	NA	NA
WP_072625113.1\|2261575_2261950_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	2.3e-16	51.2
WP_072625114.1\|2262052_2262223_+	CsbD family protein	NA	NA	NA	NA
WP_072625115.1\|2262882_2263365_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.0e-32	49.4
WP_072625116.1\|2263457_2264840_-	peptidoglycan DD-metalloendopeptidase family protein	S5M424	Bacillus_phage	6.7e-13	37.4

DBSCAN-SWA_2

3194512 : 3301920

Mycobacterium_phage(13.04%)

transposase,holin,protease,integrase

attL 3184410:3184432|attR 3310146:3310168

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3184410:3184432	attL	NA	NA	NA	NA
WP_072625886.1\|3194512_3195319_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_072625887.1\|3195465_3196491_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_072626378.1\|3196595_3197273_+	sprT domain-containing protein	H9NCM0	Mycobacterium_phage	1.3e-25	43.2
WP_072626379.1\|3197391_3197613_+	mycoredoxin	NA	NA	NA	NA
WP_072625888.1\|3197614_3198409_+	GTPase domain-containing protein	NA	NA	NA	NA
WP_094078856.1\|3198440_3199709_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_094078913.1\|3199705_3201082_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_072625889.1\|3201119_3201890_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_072625890.1\|3201889_3203146_-	glutaminase	NA	NA	NA	NA
WP_072625891.1\|3204134_3204542_+	hypothetical protein	NA	NA	NA	NA
WP_072626382.1\|3204545_3205715_-	ribonuclease	A0A2P0VMP9	Tetraselmis_virus	3.0e-22	38.2
WP_072625892.1\|3205985_3207023_-	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L7I1	Tupanvirus	1.4e-66	41.5
WP_072625893.1\|3207299_3207779_-	hypothetical protein	NA	NA	NA	NA
WP_072625894.1\|3207775_3208741_-	GNAT family N-acetyltransferase	D0R097	Streptococcus_phage	8.8e-28	39.1
WP_072626383.1\|3208893_3209514_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_072626384.1\|3209892_3210588_+	cell wall lytic activity	A0A2P1CIC9	Actinomyces_phage	9.2e-11	40.6
WP_072625895.1\|3210936_3211785_+	cell wall lytic activity	A0A2P1CIC9	Actinomyces_phage	8.1e-09	37.0
WP_072625896.1\|3211926_3213666_+	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	1.2e-38	22.1
WP_072625897.1\|3213717_3214299_-	class F sortase	NA	NA	NA	NA
WP_072625899.1\|3215637_3216309_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_072626385.1\|3216308_3217499_+	winged helix DNA-binding domain-containing protein	NA	NA	NA	NA
WP_072625900.1\|3217532_3218951_-	protein kinase	NA	NA	NA	NA
WP_072625901.1\|3219086_3219488_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_094078857.1\|3219719_3221129_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_072625902.1\|3221135_3221927_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_072625903.1\|3222034_3223585_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	5.4e-35	30.3
WP_072625904.1\|3223581_3224190_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_072625905.1\|3224351_3225083_+	hypothetical protein	NA	NA	NA	NA
WP_072625906.1\|3225151_3225496_+	DUF2200 domain-containing protein	NA	NA	NA	NA
WP_083546226.1\|3225570_3228867_-	hypothetical protein	A0A0P0CJA9	Ostreococcus_lucimarinus_virus	1.1e-42	30.3
WP_072625907.1\|3229072_3229705_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_072625908.1\|3229877_3230762_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	8.6e-54	40.1
WP_007929433.1\|3230839_3231178_-	zinc finger, DksA/TraR C4-type	NA	NA	NA	NA
WP_072625909.1\|3231310_3232390_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_072625910.1\|3232582_3232885_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_072625911.1\|3232881_3233451_-	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_072625912.1\|3233452_3234619_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA
WP_125932881.1\|3234744_3236943_+	DUF4185 domain-containing protein	NA	NA	NA	NA
WP_072625914.1\|3237162_3237873_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_072625915.1\|3238215_3238782_-	hypothetical protein	NA	NA	NA	NA
WP_094078914.1\|3238849_3239452_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	2.2e-08	52.6
WP_125932882.1\|3240093_3240450_+	hypothetical protein	NA	NA	NA	NA
WP_072625920.1\|3240666_3240927_-\|transposase	transposase	Q8W6R2	Burkholderia_virus	5.1e-15	62.3
WP_072625921.1\|3240932_3242078_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_164513616.1\|3242174_3243068_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	8.6e-62	52.6
WP_072625922.1\|3242997_3243351_-\|transposase	transposase	A0A1B3AZF8	Gordonia_phage	5.7e-17	50.5
WP_094078859.1\|3243671_3244942_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.0e-31	35.9
WP_072625925.1\|3245006_3246359_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	6.3e-32	33.9
WP_083546228.1\|3246231_3247017_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	2.2e-13	27.3
WP_083546230.1\|3247356_3247659_-	hypothetical protein	NA	NA	NA	NA
WP_125932883.1\|3247761_3248202_-	hypothetical protein	NA	NA	NA	NA
WP_072625929.1\|3248417_3248813_+	hypothetical protein	NA	NA	NA	NA
WP_072625930.1\|3248840_3249278_+	hypothetical protein	NA	NA	NA	NA
WP_164513617.1\|3249647_3251327_-	hypothetical protein	NA	NA	NA	NA
WP_072625932.1\|3251347_3252685_-	DUF2252 domain-containing protein	NA	NA	NA	NA
WP_083546340.1\|3252883_3253420_+	hypothetical protein	NA	NA	NA	NA
WP_072625934.1\|3253499_3253919_+	hypothetical protein	NA	NA	NA	NA
WP_094078915.1\|3253929_3255765_-	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	3.2e-127	41.6
WP_094078861.1\|3256245_3257516_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.0e-31	36.3
WP_072626112.1\|3257946_3259071_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_164513618.1\|3260587_3261541_+	hypothetical protein	NA	NA	NA	NA
WP_072625582.1\|3261870_3263115_+\|transposase	IS256 family transposase	A0A220NQR7	Corynebacterium_phage	2.2e-79	45.6
WP_072625938.1\|3263379_3264123_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_072625941.1\|3265897_3267022_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_159451236.1\|3267006_3267342_-	DUF3618 domain-containing protein	NA	NA	NA	NA
WP_072626390.1\|3267328_3267736_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_072625942.1\|3267740_3268103_-	hypothetical protein	NA	NA	NA	NA
WP_072625943.1\|3268277_3268550_+	DUF4235 domain-containing protein	NA	NA	NA	NA
WP_072625944.1\|3268960_3269671_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_013599792.1\|3272016_3273162_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_072625946.1\|3273512_3274337_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_072625947.1\|3274363_3275155_-	ABC transporter permease	NA	NA	NA	NA
WP_072625948.1\|3275156_3276149_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	5.0e-18	29.4
WP_072625949.1\|3276279_3277275_+	YafY family transcriptional regulator	NA	NA	NA	NA
WP_125932884.1\|3278073_3278643_+	hypothetical protein	NA	NA	NA	NA
WP_125932885.1\|3279499_3279895_-	hypothetical protein	NA	NA	NA	NA
WP_072625951.1\|3279982_3281044_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_072625952.1\|3281054_3284255_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_072625953.1\|3284254_3285472_-	hypothetical protein	NA	NA	NA	NA
WP_072625954.1\|3285471_3287244_-	SAM-dependent DNA methyltransferase	A0A220A2U5	Liberibacter_phage	2.6e-33	25.6
WP_083546235.1\|3287335_3287845_-	Abi family protein	NA	NA	NA	NA
WP_072625956.1\|3287751_3288141_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_072625957.1\|3288137_3288548_-	hypothetical protein	NA	NA	NA	NA
WP_072625958.1\|3288683_3290264_+	cation:proton antiporter	NA	NA	NA	NA
WP_072625959.1\|3290281_3290734_+	MaoC family dehydratase	NA	NA	NA	NA
WP_072625960.1\|3290991_3291528_+	hypothetical protein	NA	NA	NA	NA
WP_072625961.1\|3291509_3292772_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	2.1e-69	40.3
WP_072625962.1\|3293542_3294685_-	hypothetical protein	NA	NA	NA	NA
WP_072625963.1\|3294731_3296462_-	hypothetical protein	NA	NA	NA	NA
WP_072625964.1\|3296433_3297882_-	hypothetical protein	NA	NA	NA	NA
WP_072625965.1\|3297878_3298982_-	hypothetical protein	NA	NA	NA	NA
WP_072625966.1\|3298978_3301303_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_083546236.1\|3301299_3301920_-\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
3310146:3310168	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP013290

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection