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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018193 Granulibacter bethesdensis strain NIH7.1 chromosome, complete genome 6 crisprs csa3,cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,DinG 5 16 2 0

Results visualization

1. NZ_CP018193
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018193_1 1535820-1536275 TypeI-E I-E:I-C,I-E,II-B
7 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018193_2 1545221-1545497 TypeI-E NA
4 spacers
cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018193_3 1798400-1798476 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018193_4 1819772-1820026 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018193_5 1854210-1854969 Orphan NA
12 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018193_6 1945430-1946190 TypeI-E NA
12 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP018193_2 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545437-1545469 33 NZ_CP018193.1 632497-632529 0 1.0
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1819514-1819543 0 1.0
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1820084-1820113 0 1.0
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1820369-1820398 0 1.0
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1821509-1821538 0 1.0
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 NZ_CP018193.1 1819457-1819486 0 1.0
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 NZ_CP018193.1 1819571-1819600 0 1.0
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 NZ_CP018193.1 1820141-1820170 0 1.0
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 NZ_CP018193.1 1820426-1820455 0 1.0
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 NZ_CP018193.1 1821281-1821310 0 1.0
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 NZ_CP018193.1 1821566-1821595 0 1.0
NZ_CP018193_4 4.3|1819913|30|NZ_CP018193|CRT 1819913-1819942 30 NZ_CP018193.1 1816487-1816516 0 1.0
NZ_CP018193_4 4.3|1819913|30|NZ_CP018193|CRT 1819913-1819942 30 NZ_CP018193.1 1819628-1819657 0 1.0
NZ_CP018193_4 4.3|1819913|30|NZ_CP018193|CRT 1819913-1819942 30 NZ_CP018193.1 1820198-1820227 0 1.0
NZ_CP018193_4 4.3|1819913|30|NZ_CP018193|CRT 1819913-1819942 30 NZ_CP018193.1 1820483-1820512 0 1.0
NZ_CP018193_4 4.3|1819913|30|NZ_CP018193|CRT 1819913-1819942 30 NZ_CP018193.1 1821338-1821367 0 1.0
NZ_CP018193_4 4.3|1819913|30|NZ_CP018193|CRT 1819913-1819942 30 NZ_CP018193.1 1821623-1821652 0 1.0
NZ_CP018193_4 4.4|1819970|30|NZ_CP018193|CRT 1819970-1819999 30 NZ_CP018193.1 1819685-1819714 0 1.0
NZ_CP018193_4 4.4|1819970|30|NZ_CP018193|CRT 1819970-1819999 30 NZ_CP018193.1 1821395-1821424 0 1.0
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1816658-1816687 1 0.967
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1819175-1819204 1 0.967
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1819400-1819429 1 0.967
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 NZ_CP018193.1 1816430-1816459 1 0.967
NZ_CP018193_4 4.4|1819970|30|NZ_CP018193|CRT 1819970-1819999 30 NZ_CP018193.1 1816544-1816573 1 0.967
NZ_CP018193_4 4.4|1819970|30|NZ_CP018193|CRT 1819970-1819999 30 NZ_CP018193.1 1819286-1819315 1 0.967
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1813694-1813723 2 0.933
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP018193.1 1817003-1817032 2 0.933

1. spacer 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to position: 632497-632529, mismatch: 0, identity: 1.0

tcgtgccgttctgcaccagctccgccagatcct	CRISPR spacer
tcgtgccgttctgcaccagctccgccagatcct	Protospacer
*********************************

2. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1819514-1819543, mismatch: 0, identity: 1.0

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctgctgaccgccagcactgacaaccgtgc	Protospacer
******************************

3. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1820084-1820113, mismatch: 0, identity: 1.0

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctgctgaccgccagcactgacaaccgtgc	Protospacer
******************************

4. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1820369-1820398, mismatch: 0, identity: 1.0

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctgctgaccgccagcactgacaaccgtgc	Protospacer
******************************

5. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1821509-1821538, mismatch: 0, identity: 1.0

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctgctgaccgccagcactgacaaccgtgc	Protospacer
******************************

6. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to position: 1819457-1819486, mismatch: 0, identity: 1.0

actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
actcatagccgccagaactgatcgtcgtcg	Protospacer
******************************

7. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to position: 1819571-1819600, mismatch: 0, identity: 1.0

actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
actcatagccgccagaactgatcgtcgtcg	Protospacer
******************************

8. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to position: 1820141-1820170, mismatch: 0, identity: 1.0

actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
actcatagccgccagaactgatcgtcgtcg	Protospacer
******************************

9. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to position: 1820426-1820455, mismatch: 0, identity: 1.0

actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
actcatagccgccagaactgatcgtcgtcg	Protospacer
******************************

10. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to position: 1821281-1821310, mismatch: 0, identity: 1.0

actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
actcatagccgccagaactgatcgtcgtcg	Protospacer
******************************

11. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to position: 1821566-1821595, mismatch: 0, identity: 1.0

actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
actcatagccgccagaactgatcgtcgtcg	Protospacer
******************************

12. spacer 4.3|1819913|30|NZ_CP018193|CRT matches to position: 1816487-1816516, mismatch: 0, identity: 1.0

tttgctgaccaccagagctgagcaccgtga	CRISPR spacer
tttgctgaccaccagagctgagcaccgtga	Protospacer
******************************

13. spacer 4.3|1819913|30|NZ_CP018193|CRT matches to position: 1819628-1819657, mismatch: 0, identity: 1.0

tttgctgaccaccagagctgagcaccgtga	CRISPR spacer
tttgctgaccaccagagctgagcaccgtga	Protospacer
******************************

14. spacer 4.3|1819913|30|NZ_CP018193|CRT matches to position: 1820198-1820227, mismatch: 0, identity: 1.0

tttgctgaccaccagagctgagcaccgtga	CRISPR spacer
tttgctgaccaccagagctgagcaccgtga	Protospacer
******************************

15. spacer 4.3|1819913|30|NZ_CP018193|CRT matches to position: 1820483-1820512, mismatch: 0, identity: 1.0

tttgctgaccaccagagctgagcaccgtga	CRISPR spacer
tttgctgaccaccagagctgagcaccgtga	Protospacer
******************************

16. spacer 4.3|1819913|30|NZ_CP018193|CRT matches to position: 1821338-1821367, mismatch: 0, identity: 1.0

tttgctgaccaccagagctgagcaccgtga	CRISPR spacer
tttgctgaccaccagagctgagcaccgtga	Protospacer
******************************

17. spacer 4.3|1819913|30|NZ_CP018193|CRT matches to position: 1821623-1821652, mismatch: 0, identity: 1.0

tttgctgaccaccagagctgagcaccgtga	CRISPR spacer
tttgctgaccaccagagctgagcaccgtga	Protospacer
******************************

18. spacer 4.4|1819970|30|NZ_CP018193|CRT matches to position: 1819685-1819714, mismatch: 0, identity: 1.0

ccgctgagccgccattagtgaccgtcgcag	CRISPR spacer
ccgctgagccgccattagtgaccgtcgcag	Protospacer
******************************

19. spacer 4.4|1819970|30|NZ_CP018193|CRT matches to position: 1821395-1821424, mismatch: 0, identity: 1.0

ccgctgagccgccattagtgaccgtcgcag	CRISPR spacer
ccgctgagccgccattagtgaccgtcgcag	Protospacer
******************************

20. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1816658-1816687, mismatch: 1, identity: 0.967

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctgctgaccgccagaactgacaaccgtgc	Protospacer
*************** **************

21. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1819175-1819204, mismatch: 1, identity: 0.967

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctgctgaccgccagcactaacaaccgtgc	Protospacer
*******************.**********

22. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1819400-1819429, mismatch: 1, identity: 0.967

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctgctgaccgccagaactgacaaccgtgc	Protospacer
*************** **************

23. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to position: 1816430-1816459, mismatch: 1, identity: 0.967

actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
actcatagccgccagagctgatcgtcgtcg	Protospacer
****************.*************

24. spacer 4.4|1819970|30|NZ_CP018193|CRT matches to position: 1816544-1816573, mismatch: 1, identity: 0.967

ccgctgagccgccattagtgaccgtcgcag	CRISPR spacer
ccgcagagccgccattagtgaccgtcgcag	Protospacer
**** *************************

25. spacer 4.4|1819970|30|NZ_CP018193|CRT matches to position: 1819286-1819315, mismatch: 1, identity: 0.967

ccgctgagccgccattagtgaccgtcgcag	CRISPR spacer
ccgcagagccgccattagtgaccgtcgcag	Protospacer
**** *************************

26. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1813694-1813723, mismatch: 2, identity: 0.933

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctggtgaccgccagaactgacaaccgtgc	Protospacer
**** ********** **************

27. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to position: 1817003-1817032, mismatch: 2, identity: 0.933

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
tctgctgaccgccagaactgactaccgtgc	Protospacer
*************** ****** *******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP018193_1 1.4|1536032|32|NZ_CP018193|CRT,CRISPRCasFinder 1536032-1536063 32 KU878088 Bacillus phage AR9, complete genome 113250-113281 6 0.812
NZ_CP018193_1 1.4|1536032|32|NZ_CP018193|CRT,CRISPRCasFinder 1536032-1536063 32 MF360957 Bacillus virus PBS1, complete genome 23552-23583 6 0.812
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 NZ_CP014515 Frondihabitans sp. PAMC 28766 strain SR6 plasmid 2, complete sequence 56820-56852 6 0.818
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 NZ_CP032348 Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence 355464-355496 6 0.818
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 NZ_CP007797 Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence 419304-419336 6 0.818
NZ_CP018193_5 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854604-1854636 33 NC_013860 Azospirillum sp. B510 plasmid pAB510f, complete sequence 26343-26375 6 0.818
NZ_CP018193_6 6.4|1945642|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT 1945642-1945674 33 MN304821 Phage 66_12, partial genome 24219-24251 6 0.818
NZ_CP018193_2 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545437-1545469 33 NZ_CP027859 Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence 935925-935957 7 0.788
NZ_CP018193_2 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545437-1545469 33 NZ_CP032054 Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence 537685-537717 7 0.788
NZ_CP018193_2 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545437-1545469 33 NZ_CP016560 Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence 194941-194973 7 0.788
NZ_CP018193_4 4.1|1819799|30|NZ_CP018193|CRT 1819799-1819828 30 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 2201998-2202027 7 0.767
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 3316554-3316583 7 0.767
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 AP013464 Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51-MedDCM-OCT-S31-C32 10858-10887 7 0.767
NZ_CP018193_4 4.2|1819856|30|NZ_CP018193|CRT 1819856-1819885 30 AP013750 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C51-MedDCM-OCT-S46-C76, *** SEQUENCING IN PROGRESS *** 3655-3684 7 0.767
NZ_CP018193_4 4.4|1819970|30|NZ_CP018193|CRT 1819970-1819999 30 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 221548-221577 7 0.767
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 NZ_CP032343 Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence 122347-122379 7 0.788
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 NZ_CP022366 Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence 11885-11917 7 0.788
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 NZ_CP022366 Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence 655659-655691 7 0.788
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 NZ_CP012917 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence 606234-606266 7 0.788
NZ_CP018193_5 5.12|1854909|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854909-1854941 33 NZ_CP007130 Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence 756219-756251 7 0.788
NZ_CP018193_6 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT 1945825-1945857 33 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 2496495-2496527 7 0.788
NZ_CP018193_1 1.4|1536032|32|NZ_CP018193|CRT,CRISPRCasFinder 1536032-1536063 32 NC_009795 Campylobacter concisus 13826 plasmid pCCON31, complete sequence 14533-14564 8 0.75
NZ_CP018193_1 1.6|1536154|32|NZ_CP018193|CRT,CRISPRCasFinder 1536154-1536185 32 NZ_LR134470 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence 36836-36867 8 0.75
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 GU071101 Prochlorococcus phage P-HM1, complete genome 58792-58824 8 0.758
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NC_013857 Azospirillum sp. B510 plasmid pAB510c, complete sequence 213655-213687 8 0.758
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NC_016585 Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence 868915-868947 8 0.758
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 KX752698 Mycobacterium phage Tonenili, complete genome 102611-102643 8 0.758
NZ_CP018193_2 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545437-1545469 33 NC_014838 Pantoea sp. At-9b plasmid pPAT9B01, complete sequence 409812-409844 8 0.758
NZ_CP018193_4 4.3|1819913|30|NZ_CP018193|CRT 1819913-1819942 30 NZ_CP041755 Pseudomonas sp. KBS0707 plasmid unnamed1, complete sequence 11268-11297 8 0.733
NZ_CP018193_4 4.3|1819913|30|NZ_CP018193|CRT 1819913-1819942 30 NC_007274 Pseudomonas savastanoi pv. phaseolicola 1448A plasmid large, complete sequence 11571-11600 8 0.733
NZ_CP018193_5 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854604-1854636 33 NZ_CP020911 Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence 624430-624462 8 0.758
NZ_CP018193_5 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854604-1854636 33 NC_021911 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence 502449-502481 8 0.758
NZ_CP018193_5 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854604-1854636 33 NC_012858 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence 404038-404070 8 0.758
NZ_CP018193_5 5.10|1854787|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854787-1854819 33 NZ_CP017078 Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence 252933-252965 8 0.758
NZ_CP018193_6 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT 1945825-1945857 33 NC_007763 Rhizobium etli CFN 42 plasmid p42b, complete sequence 91405-91437 8 0.758
NZ_CP018193_6 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT 1945825-1945857 33 NZ_CP020907 Rhizobium etli strain NXC12 plasmid pRetNXC12a, complete sequence 90528-90560 8 0.758
NZ_CP018193_6 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT 1945825-1945857 33 NC_021906 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1a, complete sequence 89438-89470 8 0.758
NZ_CP018193_6 6.10|1946008|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT 1946008-1946040 33 NZ_CP014797 Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence 2300-2332 8 0.758
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NC_016585 Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence 282606-282638 9 0.727
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 MT074146 Bacteroides phage SJC03, complete genome 35893-35925 9 0.727
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 649329-649361 9 0.727
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NZ_CP039235 Piscirickettsia salmonis strain BI1 plasmid unnamed1, complete sequence 128638-128670 9 0.727
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 GU071095 Synechococcus phage S-SM2, complete genome 87700-87732 9 0.727
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NZ_CP039228 Piscirickettsia salmonis strain SR1 plasmid unnamed1, complete sequence 76821-76853 9 0.727
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NZ_CP039241 Piscirickettsia salmonis strain MR5 plasmid unnamed1, complete sequence 74526-74558 9 0.727
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 NC_016626 Burkholderia sp. YI23 plasmid byi_1p, complete sequence 1076595-1076627 9 0.727
NZ_CP018193_5 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854482-1854514 33 MT498055 Arthrobacter phage Bumble, complete genome 8125-8157 9 0.727
NZ_CP018193_5 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854604-1854636 33 NZ_CP022567 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence 375417-375449 9 0.727
NZ_CP018193_5 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854604-1854636 33 NZ_CP045381 Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence 199675-199707 9 0.727
NZ_CP018193_5 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854604-1854636 33 NZ_CP024308 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence 217193-217225 9 0.727
NZ_CP018193_5 5.11|1854848|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854848-1854880 33 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1736399-1736431 9 0.727
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NC_048015 Cyanophage S-TIM4, complete genome 60891-60923 10 0.697
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 MH512890 Cyanophage S-TIM4 60891-60923 10 0.697
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NC_015283 Prochlorococcus phage P-RSM4, complete genome 60818-60850 10 0.697
NZ_CP018193_5 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854604-1854636 33 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 200612-200644 10 0.697
NZ_CP018193_5 5.11|1854848|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR 1854848-1854880 33 NZ_CP016462 Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence 171428-171460 10 0.697
NZ_CP018193_6 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT 1945825-1945857 33 NZ_CP026517 Deinococcus sp. NW-56 plasmid unnamed1, complete sequence 132554-132586 10 0.697
NZ_CP018193_6 6.10|1946008|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT 1946008-1946040 33 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 281111-281143 10 0.697
NZ_CP018193_2 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR 1545376-1545408 33 NZ_CP049249 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence 998127-998159 11 0.667

1. spacer 1.4|1536032|32|NZ_CP018193|CRT,CRISPRCasFinder matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 6, identity: 0.812

atatttcctctttagcctgttcatataatatt-	CRISPR spacer
ataattcctttttagcctgttca-acaatttca	Protospacer
*** *****.************* *.*** *. 

2. spacer 1.4|1536032|32|NZ_CP018193|CRT,CRISPRCasFinder matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 6, identity: 0.812

atatttcctctttagcctgttcatataatatt-	CRISPR spacer
ataattcctttttagcctgttca-acaatttca	Protospacer
*** *****.************* *.*** *. 

3. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014515 (Frondihabitans sp. PAMC 28766 strain SR6 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.818

tgcgg-caccacggtcgccgcgacgacgactgca	CRISPR spacer
-gcggtcagcagggtcgccgcgacgacgacgccg	Protospacer
 **** ** ** ******************  *.

4. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.818

tgcggcaccacggtcgccgcgacga-cgactgca	CRISPR spacer
cgcggcaccaccgtggccgcgacgatctaccgc-	Protospacer
.********** ** ********** * **.** 

5. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 6, identity: 0.818

tgcggcaccacggtcgccgcgacga-cgactgca	CRISPR spacer
cgcggcaccaccgtggccgcgacgatctaccgc-	Protospacer
.********** ** ********** * **.** 

6. spacer 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NC_013860 (Azospirillum sp. B510 plasmid pAB510f, complete sequence) position: , mismatch: 6, identity: 0.818

gatgatccgcatcgacatcccgatg--ggcgatgg	CRISPR spacer
gatgatccgcctcgccatcccgatgctgctgat--	Protospacer
********** *** **********  * .***  

7. spacer 6.4|1945642|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT matches to MN304821 (Phage 66_12, partial genome) position: , mismatch: 6, identity: 0.818

ccggcagcccccacaaggtcggc---gcgatcgtgc	CRISPR spacer
ccggcagcccccacacggtgggcgaggcgagcg---	Protospacer
*************** *** ***   **** **   

8. spacer 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 7, identity: 0.788

tcgtgccg-ttctgcaccagctccgccagatcct	CRISPR spacer
-cacgctgcttcttcaccagctgcgccagatcca	Protospacer
 *..**.* **** ******** ********** 

9. spacer 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 7, identity: 0.788

tcgtgccg-ttctgcaccagctccgccagatcct	CRISPR spacer
-cacgctgcttcttcaccagctgcgccagatcca	Protospacer
 *..**.* **** ******** ********** 

10. spacer 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 7, identity: 0.788

tcgtgccg-ttctgcaccagctccgccagatcct	CRISPR spacer
-cacgctgcttcttcaccagctgcgccagatcca	Protospacer
 *..**.* **** ******** ********** 

11. spacer 4.1|1819799|30|NZ_CP018193|CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tctgctgaccgccagcactgacaaccgtgc	CRISPR spacer
gttggacaccgccagcacggacaaccgcgc	Protospacer
 .**   *********** ********.**

12. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.767

actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
gaccccagccgccacaactgatcgtggtcg	Protospacer
. .* .******** ********** ****

13. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to AP013464 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51-MedDCM-OCT-S31-C32) position: , mismatch: 7, identity: 0.767

-actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
cgggtgtag-cgccagaactgatcctcgtcg	Protospacer
 .  ..*** ************** ******

14. spacer 4.2|1819856|30|NZ_CP018193|CRT matches to AP013750 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C51-MedDCM-OCT-S46-C76, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

-actcatagccgccagaactgatcgtcgtcg	CRISPR spacer
cgggtgtag-cgccagaactgatcctcgtcg	Protospacer
 .  ..*** ************** ******

15. spacer 4.4|1819970|30|NZ_CP018193|CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ccgctgagccgccattagtgaccgtcgcag	CRISPR spacer
ttgcgacgccgccattagtggccgtcgcat	Protospacer
..** . *************.******** 

16. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 7, identity: 0.788

tgcggcaccacggtcgccgcgacga-cgactgca	CRISPR spacer
cgcggcaccaccgtggccgcgacgatctaccgt-	Protospacer
.********** ** ********** * **.*. 

17. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 7, identity: 0.788

tgcggcaccacggtcgccgcgacga-cgactgca	CRISPR spacer
cgcggcaccaccgtggccgcgacgatctaccgt-	Protospacer
.********** ** ********** * **.*. 

18. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 7, identity: 0.788

tgcggcaccacggtcgccgcgacga-cgactgca	CRISPR spacer
cgcggcaccaccgtggccgcgacgatctaccgt-	Protospacer
.********** ** ********** * **.*. 

19. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 7, identity: 0.788

tgcggcaccacggtcgccgcgacga-cgactgca	CRISPR spacer
cgcggcaccaccgtggccgcgacgatctaccgt-	Protospacer
.********** ** ********** * **.*. 

20. spacer 5.12|1854909|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.788

cgtcgcgctatctcacgcacgcgcaactattgc	CRISPR spacer
cgacgcgctatctcacgcacgcgcgccgcaagc	Protospacer
** *********************. *    **

21. spacer 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

cggcaggcgctggcggcacaggccgtatggtcg	CRISPR spacer
cagcaggcgctggcggcgcaggtcgtgcaggcg	Protospacer
*.***************.****.***...* **

22. spacer 1.4|1536032|32|NZ_CP018193|CRT,CRISPRCasFinder matches to NC_009795 (Campylobacter concisus 13826 plasmid pCCON31, complete sequence) position: , mismatch: 8, identity: 0.75

atatttcctctttagcct----gttcatataatatt	CRISPR spacer
ttatctcctctttagcctcttcattcatgtaa----	Protospacer
 ***.*************    .*****.***    

23. spacer 1.6|1536154|32|NZ_CP018193|CRT,CRISPRCasFinder matches to NZ_LR134470 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence) position: , mismatch: 8, identity: 0.75

gacccgcttcgcgacagccctgtcaggcgcgt	CRISPR spacer
gacccgcttcgccaccgccctgtacgaggggc	Protospacer
************ ** *******  *. * *.

24. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to GU071101 (Prochlorococcus phage P-HM1, complete genome) position: , mismatch: 8, identity: 0.758

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
tgtttcagcagcagcaccttctcctccaccacc	Protospacer
 *. .***************** * ******  

25. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 8, identity: 0.758

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
tgcatcagcagcagcgccttccgcaccacctcg	Protospacer
 **..**********.*****.********  .

26. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 8, identity: 0.758

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
tgcatcagcagcagcgccttccgcaccacctcg	Protospacer
 **..**********.*****.********  .

27. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to KX752698 (Mycobacterium phage Tonenili, complete genome) position: , mismatch: 8, identity: 0.758

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
cgcgccagcagcagtacctgctgcagaagctgg	Protospacer
 *************.**** *****  * * *.

28. spacer 2.4|1545437|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 8, identity: 0.758

tcgtgccgttctgcaccagctccgccagatcct	CRISPR spacer
gcaggccgtactgcgccagctccgccagatggc	Protospacer
 *. ***** ****.***************  .

29. spacer 4.3|1819913|30|NZ_CP018193|CRT matches to NZ_CP041755 (Pseudomonas sp. KBS0707 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tttgctgaccaccagagctgagcaccgtga	CRISPR spacer
agtgctgaccaccagcgttgagcacaaggt	Protospacer
  ************* *.******* . * 

30. spacer 4.3|1819913|30|NZ_CP018193|CRT matches to NC_007274 (Pseudomonas savastanoi pv. phaseolicola 1448A plasmid large, complete sequence) position: , mismatch: 8, identity: 0.733

tttgctgaccaccagagctgagcaccgtga	CRISPR spacer
agtgctgaccaccagcgttgagcacaaggt	Protospacer
  ************* *.******* . * 

31. spacer 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 8, identity: 0.758

gatgatccgcatcgacatcccgatgggcgatgg	CRISPR spacer
ctgcctccgcatcgccatcacgatgggcgatgc	Protospacer
     ********* **** ************ 

32. spacer 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 8, identity: 0.758

gatgatccgcatcgacatcccgatgggcgatgg	CRISPR spacer
ctgcctccgcatcgccatcacgatgggcgatgc	Protospacer
     ********* **** ************ 

33. spacer 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 8, identity: 0.758

gatgatccgcatcgacatcccgatgggcgatgg	CRISPR spacer
tccgatccgcatcgacatccccaagggcggtta	Protospacer
  .****************** * *****.* .

34. spacer 5.10|1854787|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017078 (Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence) position: , mismatch: 8, identity: 0.758

aaggcatattaaccccgcctgatggtatagcgc-	CRISPR spacer
tgcgcatattaaccacgcctgatgata-ggtgct	Protospacer
 . *********** *********.** .*.** 

35. spacer 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT matches to NC_007763 (Rhizobium etli CFN 42 plasmid p42b, complete sequence) position: , mismatch: 8, identity: 0.758

cggcaggcgctggcggcacaggccgtatggtcg	CRISPR spacer
cggcaggcgctcgcggcactggccgcaggactt	Protospacer
*********** ******* *****.* *... 

36. spacer 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020907 (Rhizobium etli strain NXC12 plasmid pRetNXC12a, complete sequence) position: , mismatch: 8, identity: 0.758

cggcaggcgctggcggcacaggccgtatggtcg	CRISPR spacer
cggcaggcgctcgcggcactggccgcaggactt	Protospacer
*********** ******* *****.* *... 

37. spacer 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT matches to NC_021906 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1a, complete sequence) position: , mismatch: 8, identity: 0.758

cggcaggcgctggcggcacaggccgtatggtcg	CRISPR spacer
cggcaggcgctcgcggcactggccgcaggactt	Protospacer
*********** ******* *****.* *... 

38. spacer 6.10|1946008|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 8, identity: 0.758

gctgtgcggggggcgtccgtccgcgtccgtgac	CRISPR spacer
ggcgccgaggcggcgtccgtccgcgtccttgac	Protospacer
* .*.  .** ***************** ****

39. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
accgccagcagcagcaccagctgcacgatgacc	Protospacer
. ****************  ****** *. *  

40. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 9, identity: 0.727

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
taaagtaggagctgcaccttctgcaccaccaca	Protospacer
 . . .** *** ****************** *

41. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
gcgaccagcagcagcaccatcagcaccagcgtc	Protospacer
*  .************** ** ****** *.  

42. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP039235 (Piscirickettsia salmonis strain BI1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
actgcaagcagcagctccttctgcacctggaaa	Protospacer
. .** ********* ***********   *.*

43. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to GU071095 (Synechococcus phage S-SM2, complete genome) position: , mismatch: 9, identity: 0.727

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
ggttgttgcagcagcacctgctccaccaccacc	Protospacer
**.  . ************ ** ********  

44. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP039228 (Piscirickettsia salmonis strain SR1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
actgcaagcagcagctccttctgcacctggaaa	Protospacer
. .** ********* ***********   *.*

45. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP039241 (Piscirickettsia salmonis strain MR5 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
actgcaagcagcagctccttctgcacctggaaa	Protospacer
. .** ********* ***********   *.*

46. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.727

tgcggcaccacggtcgccgcgacgacgactgca	CRISPR spacer
cgatgcgccacgggcgccgcgacgacgaaatcg	Protospacer
.*  **.****** **************   *.

47. spacer 5.5|1854482|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to MT498055 (Arthrobacter phage Bumble, complete genome) position: , mismatch: 9, identity: 0.727

tgcggcaccacggtcgccgcgacgacgactgca	CRISPR spacer
gacggcaccaccgccgccgcgacgaccgccccg	Protospacer
 .********* *.************ .*. *.

48. spacer 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 9, identity: 0.727

gatgatccgcatcgacatcccgatgggcgatgg	CRISPR spacer
tccgatccgcatcgacatccctaagggcggcta	Protospacer
  .****************** * *****.. .

49. spacer 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 9, identity: 0.727

gatgatccgcatcgacatcccgatgggcgatgg	CRISPR spacer
aggaaaccgcatcgacatccggatgggtgacga	Protospacer
.. .* ************** ******.**.*.

50. spacer 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024308 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence) position: , mismatch: 9, identity: 0.727

gatgatccgcatcgacatcccgatgggcgatgg	CRISPR spacer
ggaggtcagcatcgacatcccggtgggcgcgat	Protospacer
*. *.** **************.******  . 

51. spacer 5.11|1854848|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cggccggtctccatcgtctcggcggcaaaaata	CRISPR spacer
gggtgggtttccatcgtcgcggcggcaaatgcg	Protospacer
 **. ***.********* ********** ...

52. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NC_048015 (Cyanophage S-TIM4, complete genome) position: , mismatch: 10, identity: 0.697

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
tagtccagtagcagcaccttctgcacaacactt	Protospacer
 .  ****.***************** **    

53. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to MH512890 (Cyanophage S-TIM4) position: , mismatch: 10, identity: 0.697

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
tagtccagtagcagcaccttctgcacaacactt	Protospacer
 .  ****.***************** **    

54. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NC_015283 (Prochlorococcus phage P-RSM4, complete genome) position: , mismatch: 10, identity: 0.697

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
tagtccagtagcagcaccttctgcacaacactt	Protospacer
 .  ****.***************** **    

55. spacer 5.7|1854604|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 10, identity: 0.697

gatgatccgcatcgacatcccgatgggcgatgg	CRISPR spacer
tcctatccgcatcgacatccccaagggcggcta	Protospacer
  . ***************** * *****.. .

56. spacer 5.11|1854848|33|NZ_CP018193|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016462 (Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence) position: , mismatch: 10, identity: 0.697

cggccggtctccatcgtctcggcggcaaaaata	CRISPR spacer
gcttcggtctccatcttctcggccgcaagcttg	Protospacer
   .*********** ******* ****.  *.

57. spacer 6.7|1945825|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026517 (Deinococcus sp. NW-56 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

cggcaggcgctggcggcacaggccgtatggtcg	CRISPR spacer
gagcaggcgctggcggcgcaggtcgtcccgcgc	Protospacer
 .***************.****.*** . *.  

58. spacer 6.10|1946008|33|NZ_CP018193|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 10, identity: 0.697

gctgtgcggggggcgtccgtccgcgtccgtgac	CRISPR spacer
ccgcggcggggggcgtcaggccgcgtccggccg	Protospacer
 *   ************ * *********    

59. spacer 2.3|1545376|33|NZ_CP018193|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 11, identity: 0.667

ggcgccagcagcagcaccttctgcaccaccaga	CRISPR spacer
tcatccagcagcagcaccttcggctccatggcg	Protospacer
    ***************** ** ***. . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 948149 : 957137 9 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_2 1761750 : 1770065 11 Pseudomonas_phage(50.0%) terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage