Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP016011 Salmonella enterica subsp. enterica serovar Newport strain CFSAN001660 plasmid pCFSAN001660, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP016010 Salmonella enterica subsp. enterica serovar Newport strain CFSAN001660 chromosome, complete genome 3 crisprs PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,RT 0 19 8 0

Results visualization

1. NZ_CP016010
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016010_1 588610-588710 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016010_2 936248-937496 TypeI-E I-E
20 spacers
cas3,cas8e,cse2gr11,cas7

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP016010_3 953743-954686 TypeI-E I-E
15 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP016010_2 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 936765-936796 32 NC_011366 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence 208454-208485 7 0.781
NZ_CP016010_2 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 936765-936796 32 NC_017958 Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence 449563-449594 7 0.781
NZ_CP016010_2 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 936765-936796 32 NZ_CP035001 Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence 167100-167131 7 0.781
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NZ_CP050083 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence 24085-24116 7 0.781
NZ_CP016010_2 2.2|936338|32|NZ_CP016010|CRISPRCasFinder,CRT 936338-936369 32 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 824700-824731 8 0.75
NZ_CP016010_2 2.5|936521|32|NZ_CP016010|CRISPRCasFinder,CRT 936521-936552 32 NZ_CP042626 Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-11, complete sequence 1117-1148 8 0.75
NZ_CP016010_2 2.21|936337|33|NZ_CP016010|PILER-CR 936337-936369 33 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 824700-824732 8 0.758
NZ_CP016010_3 3.1|953772|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953772-953803 32 NZ_CP032319 Hymenobacter oligotrophus strain sh-6 plasmid unnamed2, complete sequence 4010-4041 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021653 Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence 1288773-1288804 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP012940 Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence 1033889-1033920 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP012944 Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence 809005-809036 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP012688 Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence 1288780-1288811 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_017575 Ralstonia solanacearum Po82 megaplasmid, complete sequence 1537348-1537379 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP026308 Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence 1537292-1537323 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 CP047139 Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence 1215720-1215751 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP051295 Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence 1024904-1024935 8 0.75
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 CP047137 Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence 1162298-1162329 8 0.75
NZ_CP016010_3 3.7|954138|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954138-954169 32 NZ_CP023524 Burkholderia gladioli pv. gladioli strain FDAARGOS_389 plasmid unnamed, complete sequence 81762-81793 8 0.75
NZ_CP016010_3 3.7|954138|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954138-954169 32 NZ_CP032326 Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence 2310-2341 8 0.75
NZ_CP016010_3 3.7|954138|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954138-954169 32 NZ_CP032326 Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence 359399-359430 8 0.75
NZ_CP016010_3 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954199-954230 32 NC_016907 Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence 64697-64728 8 0.75
NZ_CP016010_3 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954199-954230 32 NZ_CP010858 Marinovum algicola DG 898 plasmid pMaD3 3485-3516 8 0.75
NZ_CP016010_2 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT 936277-936308 32 MT711528 Escherichia phage vB_EcoS_fTaEco03, complete genome 12261-12292 9 0.719
NZ_CP016010_2 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT 936277-936308 32 MT711525 Escherichia phage vB_EcoS_fKuEco01, complete genome 11823-11854 9 0.719
NZ_CP016010_2 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT 936277-936308 32 GU196278 Escherichia phage K1H, complete genome 12039-12070 9 0.719
NZ_CP016010_2 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT 936277-936308 32 NC_027993 Escherichia phage K1G, complete genome 13924-13955 9 0.719
NZ_CP016010_2 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT 936277-936308 32 MT711527 Escherichia phage vB_EcoS_fTaEco01, complete genome 11822-11853 9 0.719
NZ_CP016010_2 2.3|936399|32|NZ_CP016010|CRISPRCasFinder,CRT 936399-936430 32 NC_011255 Borrelia recurrentis A1 plasmid pl35, complete sequence 27906-27937 9 0.719
NZ_CP016010_2 2.3|936399|32|NZ_CP016010|CRISPRCasFinder,CRT 936399-936430 32 NC_011249 Borrelia duttonii Ly plasmid pl36, complete sequence 31225-31256 9 0.719
NZ_CP016010_2 2.3|936399|32|NZ_CP016010|CRISPRCasFinder,CRT 936399-936430 32 NZ_CP032297 Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence 360899-360930 9 0.719
NZ_CP016010_2 2.3|936399|32|NZ_CP016010|CRISPRCasFinder,CRT 936399-936430 32 NZ_CP034837 Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence 234035-234066 9 0.719
NZ_CP016010_2 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 936765-936796 32 DQ674738 Aeromonas phage phiO18P, complete genome 15707-15738 9 0.719
NZ_CP016010_2 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 936765-936796 32 NZ_CP031166 Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence 380725-380756 9 0.719
NZ_CP016010_2 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 936765-936796 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 153785-153816 9 0.719
NZ_CP016010_2 2.14|937070|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 937070-937101 32 MN694645 Marine virus AFVG_250M761, complete genome 31050-31081 9 0.719
NZ_CP016010_2 2.24|936520|33|NZ_CP016010|PILER-CR 936520-936552 33 NZ_CP042626 Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-11, complete sequence 1116-1148 9 0.727
NZ_CP016010_3 3.1|953772|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953772-953803 32 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 264920-264951 9 0.719
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NZ_CP031397 Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence 50720-50751 9 0.719
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NZ_CP019854 Borreliella burgdorferi plasmid lp54, complete sequence 50432-50463 9 0.719
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NZ_CP019765 Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence 50432-50463 9 0.719
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NC_011784 Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence 50419-50450 9 0.719
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NZ_CP017218 Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence 3209-3240 9 0.719
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NC_013130 Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence 50566-50597 9 0.719
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NC_013129 Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence 49711-49742 9 0.719
NZ_CP016010_3 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953894-953925 32 NC_001857 Borreliella burgdorferi B31 plasmid lp54, complete sequence 50439-50470 9 0.719
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP013071 Sphingobium indicum B90A plasmid pSRL1, complete sequence 95275-95306 9 0.719
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP016593 Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence 89822-89853 9 0.719
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_017386 Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence 25018-25049 9 0.719
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP032328 Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence 137631-137662 9 0.719
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_014621 Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence 260283-260314 9 0.719
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP012909 Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence 89825-89856 9 0.719
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP035512 Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence 36173-36204 9 0.719
NZ_CP016010_3 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954565-954596 32 NZ_CP050096 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence 151458-151489 9 0.719
NZ_CP016010_3 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954565-954596 32 NZ_CP050102 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence 132694-132725 9 0.719
NZ_CP016010_3 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954565-954596 32 NZ_CP050107 Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence 169943-169974 9 0.719
NZ_CP016010_3 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954565-954596 32 NZ_CP050112 Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence 169942-169973 9 0.719
NZ_CP016010_3 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954565-954596 32 NZ_CP048285 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence 30547-30578 9 0.719
NZ_CP016010_2 2.5|936521|32|NZ_CP016010|CRISPRCasFinder,CRT 936521-936552 32 LR026976 Bacillus pumilus isolate 1 genome assembly, plasmid: p576 23626-23657 10 0.688
NZ_CP016010_2 2.5|936521|32|NZ_CP016010|CRISPRCasFinder,CRT 936521-936552 32 NC_022882 Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence 54509-54540 10 0.688
NZ_CP016010_2 2.15|937131|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 937131-937162 32 KF751793 Campylobacter phage CJIE4-1, complete genome 18118-18149 10 0.688
NZ_CP016010_2 2.20|937436|32|NZ_CP016010|CRISPRCasFinder,CRT 937436-937467 32 NZ_CP054615 Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence 146919-146950 10 0.688
NZ_CP016010_3 3.1|953772|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953772-953803 32 NZ_CP006373 Aureimonas sp. AU20 plasmid pAU20f, complete sequence 26111-26142 10 0.688
NZ_CP016010_3 3.2|953833|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 953833-953864 32 CP009871 Pantoea sp. PSNIH2 plasmid pPSP-cd6, complete sequence 51629-51660 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_019849 Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence 321926-321957 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_003078 Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence 1419399-1419430 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP019586 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence 1381773-1381804 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_017326 Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence 320882-320913 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021799 Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence 1485620-1485651 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_017323 Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence 1558385-1558416 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP009146 Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence 316953-316984 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_018701 Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence 316127-316158 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021828 Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence 985870-985901 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP030263 Ensifer adhaerens strain Corn53 plasmid AA, complete sequence 170280-170311 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021802 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence 933963-933994 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021820 Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence 662756-662787 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021831 Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence 566677-566708 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021823 Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence 1106266-1106297 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021814 Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence 198239-198270 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021795 Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence 646299-646330 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021810 Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence 1104921-1104952 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021806 Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence 698669-698700 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP021218 Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence 470049-470080 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP026527 Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence 320640-320671 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP014797 Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence 184288-184319 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP019484 Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence 1537726-1537757 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 990467-990498 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NZ_CP019487 Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence 1314080-1314111 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_020560 Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence 1419404-1419435 10 0.688
NZ_CP016010_3 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954077-954108 32 NC_016586 Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence 405660-405691 10 0.688
NZ_CP016010_3 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954199-954230 32 NC_005262 Burkholderia cepacia phage Bcep22, complete genome 17206-17237 10 0.688
NZ_CP016010_3 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954199-954230 32 NZ_CP015746 Shinella sp. HZN7 plasmid pShin-10, complete sequence 61466-61497 10 0.688
NZ_CP016010_3 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954199-954230 32 NZ_CP019446 Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 plasmid p888-76-1, complete sequence 17753-17784 10 0.688
NZ_CP016010_3 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954199-954230 32 NZ_CP032923 Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence 101360-101391 10 0.688
NZ_CP016010_3 3.11|954382|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT 954382-954413 32 NC_019957 Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence 63429-63460 10 0.688
NZ_CP016010_2 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 936765-936796 32 NZ_CP054036 Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence 234768-234799 11 0.656
NZ_CP016010_2 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR 936765-936796 32 NZ_CP022568 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence 299431-299462 11 0.656
NZ_CP016010_3 3.15|954626|32|NZ_CP016010|CRISPRCasFinder,CRT 954626-954657 32 CP054927 Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence 47822-47853 11 0.656

1. spacer 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*   

2. spacer 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcaccgccgatcctttcaccgccgcc	Protospacer
********* ********* ****. *.  **

3. spacer 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*   

4. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 7, identity: 0.781

aaatcgtcaataaaattattggcgc--gccatcc	CRISPR spacer
ggatcgtcaatgaatttattggcgctggctat--	Protospacer
..*********.** **********  **.**  

5. spacer 2.2|936338|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 8, identity: 0.75

tgcttcctgctgattttctgcgtctactggat	CRISPR spacer
ctcatcctgcagattttcttcgtctactatgt	Protospacer
. * ****** ******** ********. .*

6. spacer 2.5|936521|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NZ_CP042626 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-11, complete sequence) position: , mismatch: 8, identity: 0.75

cgggccatgttcttttccctctaaaaaatccg	CRISPR spacer
ataaacatgattttttccctctaaaaaatccc	Protospacer
  .. **** *.******************* 

7. spacer 2.21|936337|33|NZ_CP016010|PILER-CR matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 8, identity: 0.758

gtgcttcctgctgattttctgcgtctactggat	CRISPR spacer
gctcatcctgcagattttcttcgtctactatgt	Protospacer
*. * ****** ******** ********. .*

8. spacer 3.1|953772|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032319 (Hymenobacter oligotrophus strain sh-6 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ccagcctg--tagcgtgggggcgttgggtagcct	CRISPR spacer
--ggtgtggccagcgtggtagcgttgggtagcct	Protospacer
  .*. **  .******* .**************

9. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

10. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

11. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

12. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

13. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

14. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

15. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

16. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

17. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
acgctggcgtccagcgcgagcagcatggccca	Protospacer
*. .* ** **********.********* * 

18. spacer 3.7|954138|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023524 (Burkholderia gladioli pv. gladioli strain FDAARGOS_389 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tccgactcgccaacctggtctatgtgctctat	CRISPR spacer
ccctactggccaacctggtctatgtgcagccg	Protospacer
.** *** *******************  .  

19. spacer 3.7|954138|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

tccgactcgccaacctggtctatgtgctctat	CRISPR spacer
cgctgggcgccaacctgttctatctgctctat	Protospacer
. * .  ********** ***** ********

20. spacer 3.7|954138|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

tccgactcgccaacctggtctatgtgctctat	CRISPR spacer
cgctgggcgccaacctgttctatctgctctat	Protospacer
. * .  ********** ***** ********

21. spacer 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_016907 (Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence) position: , mismatch: 8, identity: 0.75

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cggggtgatcaccgcctcgcggaaggtcttgc	Protospacer
 ******** ********** *** *.. .**

22. spacer 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010858 (Marinovum algicola DG 898 plasmid pMaD3) position: , mismatch: 8, identity: 0.75

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cgtggtgatcaccggctcgctgaacggcctgc	Protospacer
 * ****** **** *********** . .**

23. spacer 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT matches to MT711528 (Escherichia phage vB_EcoS_fTaEco03, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...* 

24. spacer 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT matches to MT711525 (Escherichia phage vB_EcoS_fKuEco01, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...* 

25. spacer 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT matches to GU196278 (Escherichia phage K1H, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...* 

26. spacer 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NC_027993 (Escherichia phage K1G, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...* 

27. spacer 2.1|936277|32|NZ_CP016010|CRISPRCasFinder,CRT matches to MT711527 (Escherichia phage vB_EcoS_fTaEco01, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgtatttcgattgtctggacatt-tcgtac	CRISPR spacer
ttgcgcatttcgatagtctggacgccgttaca-	Protospacer
*****.******** ********... *...* 

28. spacer 2.3|936399|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NC_011255 (Borrelia recurrentis A1 plasmid pl35, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaatatgatttatatagaaccaatgaact	CRISPR spacer
aaaaaatatgatttatatagaaataatttata	Protospacer
. *.****************** .***  *. 

29. spacer 2.3|936399|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NC_011249 (Borrelia duttonii Ly plasmid pl36, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaatatgatttatatagaaccaatgaact	CRISPR spacer
aaaaaatatgatttatatagaaataatttata	Protospacer
. *.****************** .***  *. 

30. spacer 2.3|936399|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaatatgatttatatagaaccaatgaact	CRISPR spacer
caccaataggatttatattgaaccaataatcc	Protospacer
    **** ********* ********.* *.

31. spacer 2.3|936399|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaatatgatttatatagaaccaatgaact	CRISPR spacer
caccaataggatttatattgaaccaataatcc	Protospacer
    **** ********* ********.* *.

32. spacer 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcagcgccgagcagttcagcaaactg	Protospacer
**************** * *****  . .*. 

33. spacer 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
gcggcatcagcgccgaccggttcaccgtcagg	Protospacer
 ***************.* *****. **    

34. spacer 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatgagcgccgatcagttcgacgccctg	Protospacer
******* ********** ****.  *. *. 

35. spacer 2.14|937070|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719

aacaggaacaggaaaaaaaagatttgtccggt	CRISPR spacer
tacagtaacaggaaaaaaaggattaatgatgc	Protospacer
 **** *************.**** .*   *.

36. spacer 2.24|936520|33|NZ_CP016010|PILER-CR matches to NZ_CP042626 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-11, complete sequence) position: , mismatch: 9, identity: 0.727

gcgggccatgttcttttccctctaaaaaatccg	CRISPR spacer
aataaacatgattttttccctctaaaaaatccc	Protospacer
.  .. **** *.******************* 

37. spacer 3.1|953772|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

ccagcctgtagcgtgggggcgttgggtagcct	CRISPR spacer
cggccctgtagcggaggggcgttgggtcccgg	Protospacer
* . ********* .************  *  

38. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

39. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

40. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

41. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

42. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

43. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

44. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

45. spacer 3.3|953894|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgtcaataaaattattggcgcgccatcc	CRISPR spacer
aaatcgtcgataacattattggcgaatatgac	Protospacer
********.**** ********** ..    *

46. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013071 (Sphingobium indicum B90A plasmid pSRL1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
tcccgcgcccccagcgcgaacagcatggccgc	Protospacer
 ... .***.*******************  *

47. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016593 (Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

48. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_017386 (Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

49. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032328 (Azospirillum brasilense strain MTCC4035 plasmid p7, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
aacagcgccgccagcgcgaacagcatcgccgc	Protospacer
* .  .*** **************** **  *

50. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_014621 (Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

51. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012909 (Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

52. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035512 (Haematobacter massiliensis strain OT1 plasmid pOT1-2, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agaagcgccttcagcgcgaacaggatggcagc	Protospacer
*    .****.************ *****. *

53. spacer 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **  

54. spacer 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **  

55. spacer 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **  

56. spacer 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **  

57. spacer 3.14|954565|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048285 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaata---cgtcgcgataccagtcactccggaa	CRISPR spacer
---agtgtgccgtcgcgataccagtcagtcaggcc	Protospacer
   *.*.   ***************** ** **  

58. spacer 2.5|936521|32|NZ_CP016010|CRISPRCasFinder,CRT matches to LR026976 (Bacillus pumilus isolate 1 genome assembly, plasmid: p576) position: , mismatch: 10, identity: 0.688

cgggccatgttcttttccctctaaaaaatccg	CRISPR spacer
ctctttttgatcttttcactctaaaaaatctc	Protospacer
*   .. ** ******* ************. 

59. spacer 2.5|936521|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NC_022882 (Bacillus thuringiensis YBT-1518 plasmid pBMB0233, complete sequence) position: , mismatch: 10, identity: 0.688

cgggccatgttcttttccctctaaaaaatccg	CRISPR spacer
aaacacgagttcttttcgctgtaaaaaatcca	Protospacer
 ..  *. ********* ** **********.

60. spacer 2.15|937131|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to KF751793 (Campylobacter phage CJIE4-1, complete genome) position: , mismatch: 10, identity: 0.688

acgttttaacagggtaatatttacttaattat	CRISPR spacer
ttgcattagcagtgtaatatttacttaaagca	Protospacer
 .*. ***.*** ***************    

61. spacer 2.20|937436|32|NZ_CP016010|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*  

62. spacer 3.1|953772|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006373 (Aureimonas sp. AU20 plasmid pAU20f, complete sequence) position: , mismatch: 10, identity: 0.688

ccagcctgtagcgtgggggcgttgggtagcct	CRISPR spacer
gaacgtcttagcgtcggggcgttgggtcgcca	Protospacer
  *  .. ****** ************ *** 

63. spacer 3.2|953833|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to CP009871 (Pantoea sp. PSNIH2 plasmid pPSP-cd6, complete sequence) position: , mismatch: 10, identity: 0.688

catcttttacgcatgttgatgtgcgttcaaat	CRISPR spacer
ccgattttacgcatgttgctgcgcgttgccgg	Protospacer
*   ************** **.*****   . 

64. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

65. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

66. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

67. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

68. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

69. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

70. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

71. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

72. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

73. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
aacaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

74. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

75. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

76. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

77. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

78. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

79. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

80. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

81. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

82. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

83. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

84. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
gtcccggcctcctgcgcgatcagcatggcaag	Protospacer
.*... ****** ****** *********.  

85. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

86. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
tgccccgggtccacctcgaacagcatggcgcc	Protospacer
  ....*  **** * ****************

87. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

88. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
agcaggcggtccagcgcgaccagcagggcgcc	Protospacer
* .      ********** ***** ******

89. spacer 3.6|954077|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcctccagcgcgaacagcatggcgcc	CRISPR spacer
ggcgtcagttccagcgcgtccagcatggcgcc	Protospacer
. . *.. .*********  ************

90. spacer 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
ctcggtgataacggccttgctgaacgcggtcg	Protospacer
   ********* ****.********* ..  

91. spacer 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015746 (Shinella sp. HZN7 plasmid pShin-10, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
cagcccttgaaccgccaggctgaacgctacgc	Protospacer
 .*  .   *******  **************

92. spacer 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019446 (Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 plasmid p888-76-1, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
tgatgtgataaccacatcgctgaacgccttca	Protospacer
 *. *********.* ***********. .  

93. spacer 3.8|954199|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032923 (Agrobacterium tumefaciens strain 1D1108 plasmid pAt1D1108a, complete sequence) position: , mismatch: 10, identity: 0.688

gggggtgataaccgcctcgctgaacgctacgc	CRISPR spacer
ttcaccggcaaccgcatcgctgtacgctacgc	Protospacer
   . .*..****** ****** *********

94. spacer 3.11|954382|32|NZ_CP016010|PILER-CR,CRISPRCasFinder,CRT matches to NC_019957 (Mycobacterium sp. JS623 plasmid pMYCSM01, complete sequence) position: , mismatch: 10, identity: 0.688

cattcgctcaatagcggcccgcgtggcggtga	CRISPR spacer
agcgcgctcaatagcggaccgcgcggcaacgg	Protospacer
 .. ************* *****.***...*.

95. spacer 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

96. spacer 2.9|936765|32|NZ_CP016010|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

97. spacer 3.15|954626|32|NZ_CP016010|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

aggggcgttccgcagtcggcaagggctgaaaa	CRISPR spacer
tcgggcatcccgcagtcggcaagggtgcggcg	Protospacer
  ****.*.****************.  .. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1120146 : 1194722 96 Salmonella_phage(57.95%) lysis,integrase,protease,tail,holin,capsid,terminase,portal,plate,transposase,head attL 1161158:1161203|attR 1194792:1194837
DBSCAN-SWA_2 1723775 : 1732946 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_3 1807444 : 1817951 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_4 1911093 : 1958567 63 Salmonella_phage(77.97%) lysis,integrase,protease,tail,holin,capsid,terminase,portal,plate,head attL 1912339:1912354|attR 1923870:1923885
DBSCAN-SWA_5 2870026 : 2946361 86 Salmonella_phage(78.95%) lysis,protease,tail,capsid,holin,plate NA
DBSCAN-SWA_6 3017576 : 3024889 7 Ralstonia_phage(16.67%) protease NA
DBSCAN-SWA_7 4383248 : 4428023 47 Burkholderia_phage(36.36%) tail,tRNA,plate,holin NA
DBSCAN-SWA_8 4546676 : 4611182 75 Salmonella_phage(46.51%) lysis,integrase,protease,tail,holin,capsid,terminase,portal,plate,head attL 4576539:4576585|attR 4606557:4606603
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage