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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010171 Escherichia coli strain H7 chromosome, complete genome 10 crisprs DinG,DEDDh,c2c9_V-U4,cas3,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2 0 16 9 0

Results visualization

1. NZ_CP010171
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_1 294372-294495 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_2 1011030-1011121 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_3 1305830-1305974 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_4 1540796-1540892 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_5 2127039-2127180 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_6 2300348-2300497 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_7 3542137-3542246 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_8 3932443-3932837 Orphan I-E
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_9 3959885-3960462 TypeI-E I-E
9 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010171_10 4478650-4478765 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010171_2 2.1|1011056|40|NZ_CP010171|CRISPRCasFinder 1011056-1011095 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_LT904879 Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2 214004-214035 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_KX129784 Escherichia coli strain H226B plasmid pH226B, complete sequence 106151-106182 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029645 Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence 161603-161634 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029729 Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence 16802-16833 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP018652 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence 95891-95922 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP035180 Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence 170818-170849 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NC_002305 Salmonella typhi plasmid R27, complete sequence 140772-140803 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP024236 Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence 207170-207201 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029895 Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence 161924-161955 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029877 Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence 161722-161753 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 LT905061 Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2 57467-57498 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029926 Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence 103851-103882 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029947 Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence 163267-163298 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029943 Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence 161711-161742 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029953 Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence 162034-162065 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029955 Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence 161979-162010 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029924 Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence 28586-28617 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029934 Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence 161722-161753 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029939 Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence 160432-160463 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029957 Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence 161487-161518 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029941 Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence 161814-161845 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029910 Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence 161722-161753 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029887 Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence 161548-161579 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029948 Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence 161924-161955 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029937 Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence 161450-161481 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029879 Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence 159236-159267 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 153566-153597 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NC_016825 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence 151174-151205 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029931 Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence 161555-161586 0 1.0
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP029935 Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence 161339-161370 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP038506 Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence 11835-11866 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP019283 Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence 42147-42178 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 CP042641 Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence 36520-36551 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP034821 Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence 1557-1588 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP027443 Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence 9506-9537 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP027575 Escherichia coli strain 2013C-4081 plasmid unnamed2 94756-94787 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP027223 Escherichia coli strain 2015C-3101 plasmid unnamed2 65534-65565 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP030188 Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence 61916-61947 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP027590 Escherichia coli strain 2014C-3011 plasmid unnamed2 64165-64196 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP039862 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence 20286-20317 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP033632 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence 119284-119315 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_AP018798 Escherichia coli strain E2855 plasmid pE2855-2, complete sequence 85099-85130 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 CP012494 Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence 46688-46719 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 CP027320 Escherichia coli strain 2014C-3084 plasmid unnamed1 42116-42147 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NC_013370 Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence 87237-87268 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP026475 Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence 81853-81884 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 MN510445 Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence 70500-70531 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 MN510447 Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence 47861-47892 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP012491 Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence 62997-63028 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 MH422554 Escherichia phage P1, complete genome 87194-87225 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NC_050152 Enterobacteria phage P7, complete genome 93995-94026 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 MH445380 Escherichia virus P1 isolate transconjugant 2(L-II), complete genome 58645-58676 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NC_031129 Salmonella phage SJ46, complete genome 77363-77394 0 1.0
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 MH445381 Escherichia virus P1, complete genome 56870-56901 0 1.0
NZ_CP010171_1 1.1|294415|38|NZ_CP010171|CRISPRCasFinder 294415-294452 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_KP453775 Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence 17440-17471 2 0.938
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP017632 Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence 122310-122341 2 0.938
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP030285 Escherichia coli strain E308 plasmid pLKSZ04, complete sequence 6029-6060 2 0.938
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 NZ_CP036204 Escherichia coli strain L725 plasmid punnamed2, complete sequence 15121-15152 2 0.938
NZ_CP010171_9 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960402-3960433 32 MN510446 Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence 131402-131433 2 0.938
NZ_CP010171_8 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder 3932533-3932564 32 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3605 3 0.906
NZ_CP010171_8 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder 3932533-3932564 32 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3598 3 0.906
NZ_CP010171_8 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder 3932533-3932564 32 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21074 3 0.906
NZ_CP010171_8 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT 3932532-3932564 33 NZ_LR134258 Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence 3574-3606 4 0.879
NZ_CP010171_8 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT 3932532-3932564 33 LR134281 Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6 3567-3599 4 0.879
NZ_CP010171_8 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT 3932532-3932564 33 KY271401 Klebsiella phage 1 LV-2017, complete genome 21043-21075 4 0.879
NZ_CP010171_8 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder 3932533-3932564 32 KY653119 Morganella phage IME1369_02, complete genome 18217-18248 5 0.844
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24789-24826 6 0.842
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24902-24939 6 0.842
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4073-4110 6 0.842
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4072-4109 6 0.842
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4072-4109 6 0.842
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4072-4109 6 0.842
NZ_CP010171_8 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT 3932532-3932564 33 KY653119 Morganella phage IME1369_02, complete genome 18216-18248 6 0.818
NZ_CP010171_8 8.9|3932594|32|NZ_CP010171|CRISPRCasFinder 3932594-3932625 32 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 755173-755204 7 0.781
NZ_CP010171_9 9.6|3960219|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960219-3960250 32 NC_021623 Borrelia hermsii strain HS1 plasmid lp174, complete sequence 117325-117356 7 0.781
NZ_CP010171_9 9.6|3960219|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960219-3960250 32 NZ_CP014350 Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence 126529-126560 7 0.781
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3331-3368 8 0.789
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3330-3367 8 0.789
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3330-3367 8 0.789
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3330-3367 8 0.789
NZ_CP010171_8 8.3|3932593|33|NZ_CP010171|PILER-CR,CRT 3932593-3932625 33 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 755172-755204 8 0.758
NZ_CP010171_8 8.9|3932594|32|NZ_CP010171|CRISPRCasFinder 3932594-3932625 32 NZ_CP007070 Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence 191920-191951 8 0.75
NZ_CP010171_8 8.12|3932777|32|NZ_CP010171|CRISPRCasFinder 3932777-3932808 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
NZ_CP010171_9 9.5|3960158|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960158-3960189 32 NZ_CP034366 Pantoea sp. CCBC3-3-1 plasmid unnamed3, complete sequence 32435-32466 8 0.75
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14114-14151 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 51843-51880 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229388-229425 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239882-239919 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230794-230831 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211764-211801 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40383-40420 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 313601-313638 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 386517-386554 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 397090-397127 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 404135-404172 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 114998-115035 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 40307-40344 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 MT230112 Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence 103-140 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31308-31345 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 8897-8934 9 0.763
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 17901-17938 9 0.763
NZ_CP010171_8 8.7|3932472|32|NZ_CP010171|CRISPRCasFinder 3932472-3932503 32 NC_007959 Nitrobacter hamburgensis X14 plasmid 1, complete sequence 246573-246604 9 0.719
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP013589 Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence 475803-475834 9 0.719
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP013531 Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence 502914-502945 9 0.719
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP013536 Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence 428608-428639 9 0.719
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP013541 Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence 489713-489744 9 0.719
NZ_CP010171_9 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3959914-3959945 32 NZ_CP013584 Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence 502914-502945 9 0.719
NZ_CP010171_9 9.3|3960036|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960036-3960067 32 NC_012970 Methylovorus glucosetrophus SIP3-4 plasmid pMsip01, complete sequence 152-183 9 0.719
NZ_CP010171_9 9.5|3960158|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960158-3960189 32 NZ_AP019826 Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-3, complete sequence 1048-1079 9 0.719
NZ_CP010171_9 9.7|3960280|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960280-3960311 32 MN693721 Marine virus AFVG_250M181, complete genome 13812-13843 9 0.719
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56040-56077 10 0.737
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP053046 Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence 58275-58312 10 0.737
NZ_CP010171_5 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder 2127091-2127128 38 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30215-30252 10 0.737
NZ_CP010171_8 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder 3932533-3932564 32 MF158039 Shigella phage Sf12, complete genome 4975-5006 10 0.688
NZ_CP010171_8 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder 3932533-3932564 32 MF158042 Shigella phage Sd1, complete genome 938-969 10 0.688
NZ_CP010171_9 9.4|3960097|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960097-3960128 32 NZ_CP025114 Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence 58163-58194 10 0.688
NZ_CP010171_9 9.6|3960219|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT 3960219-3960250 32 MK613349 Roseobacter phage CRP-7, complete genome 23520-23551 10 0.688
NZ_CP010171_8 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT 3932532-3932564 33 MF158039 Shigella phage Sf12, complete genome 4974-5006 11 0.667
NZ_CP010171_8 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT 3932532-3932564 33 MF158042 Shigella phage Sd1, complete genome 937-969 11 0.667

1. spacer 2.1|1011056|40|NZ_CP010171|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904879 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

3. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX129784 (Escherichia coli strain H226B plasmid pH226B, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

4. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029645 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

5. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029729 (Citrobacter sp. CRE-46 strain AR_0157 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

6. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018652 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

7. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035180 (Klebsiella pneumoniae strain BA33875 plasmid pBA33875_IncFIB, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

8. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NC_002305 (Salmonella typhi plasmid R27, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

9. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024236 (Escherichia coli O6:H16 strain 2014EL-1346-6 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

10. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029895 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_252186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

11. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029877 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_224186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

12. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to LT905061 (Salmonella enterica subsp. enterica serovar Typhi isolate ISP_03_07467_SGB110-sc-1979083 genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

13. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029926 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_218186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

14. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029947 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_210186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

15. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029943 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_212186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

16. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029953 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_204186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

17. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029955 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_202186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

18. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029924 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_221186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

19. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029934 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_214186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

20. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029939 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_206186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

21. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029957 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_201186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

22. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029941 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_203186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

23. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029910 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_219186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

24. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029887 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_220186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

25. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029948 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_208186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

26. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029937 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_207186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

27. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029879 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_223186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

28. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

29. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NC_016825 (Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

30. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029931 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_215186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

31. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029935 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_213186 plasmid pHCM1, complete sequence) position: , mismatch: 0, identity: 1.0 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cttgtattctgaccgtcgagcgcggtaatggt	Protospacer
********************************

32. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

33. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

34. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

35. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

36. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

37. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

38. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

39. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

40. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

41. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

42. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

43. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

44. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

45. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

46. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

47. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

48. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

49. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

50. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

51. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

52. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

53. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

54. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

55. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

56. spacer 1.1|294415|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947 

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

57. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

58. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

59. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

60. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

61. spacer 9.9|3960402|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938 

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

62. spacer 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906 

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

63. spacer 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906 

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

64. spacer 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906 

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
gggttcgcggcgttaacgctcaccagcatttc	Protospacer
* ***.*****.********************

65. spacer 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

66. spacer 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

67. spacer 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggggttcgcggcgttaacgctcaccagcatttc	Protospacer
 * ***.*****.********************

68. spacer 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844 

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ggttgtgcggcgttaacgctgaccagcatttc	Protospacer
*  * ******.******** ***********

69. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

70. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

71. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

72. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

73. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

74. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

75. spacer 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
aggttgtgcggcgttaacgctgaccagcatttc	Protospacer
 *  * ******.******** ***********

76. spacer 8.9|3932594|32|NZ_CP010171|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781 

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
ccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
 *******.**************** *.. *.

77. spacer 9.6|3960219|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NC_021623 (Borrelia hermsii strain HS1 plasmid lp174, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcagtaaattatttgacctcgttgataatccc	CRISPR spacer
cgcag-aaattttttgaccttgttgataagttt	Protospacer
 **** ***** ********.******** ...

78. spacer 9.6|3960219|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014350 (Borrelia hermsii HS1 isolate Browne Mountain plasmid megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcagtaaattatttgacctcgttgataatccc	CRISPR spacer
cgcag-aaattttttgaccttgttgataagttt	Protospacer
 **** ***** ********.******** ...

79. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

80. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

81. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

82. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

83. spacer 8.3|3932593|33|NZ_CP010171|PILER-CR,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758 

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

84. spacer 8.9|3932594|32|NZ_CP010171|CRISPRCasFinder matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75 

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
atgcggtcatggatgctgatgttgcagtgatg	Protospacer
*.*.********.***** ******** * ..

85. spacer 8.12|3932777|32|NZ_CP010171|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75 

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

86. spacer 9.5|3960158|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034366 (Pantoea sp. CCBC3-3-1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75 

tcgaaaaacttcgtcctgaaaaaattcatcat	CRISPR spacer
gatgaaaacttcatcctgaaaaaattcgccac	Protospacer
   .********.**************..**.

87. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

88. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

89. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

90. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

91. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

92. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

93. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

94. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

95. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

96. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

97. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

98. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

99. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

100. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

101. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

102. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

103. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

104. spacer 8.7|3932472|32|NZ_CP010171|CRISPRCasFinder matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaaaccgggcaatcgcaaaaaggcgtaat	CRISPR spacer
gaaaaaaccgcccaatcgcaaaaagatgacga	Protospacer
* ********  *************..*  .

105. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cgggtattcagagcgtcgagcgcggtcagatg	Protospacer
*  ****** ** ************* * .

106. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cgggtattcagagcgtcgagcgcggtcagatg	Protospacer
*  ****** ** ************* * .

107. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cgggtattcagagcgtcgagcgcggtcagatg	Protospacer
*  ****** ** ************* * .

108. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cgggtattcagagcgtcgagcgcggtcagatg	Protospacer
*  ****** ** ************* * .

109. spacer 9.1|3959914|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 9, identity: 0.719 

cttgtattctgaccgtcgagcgcggtaatggt	CRISPR spacer
cgggtattcagagcgtcgagcgcggtcagatg	Protospacer
*  ****** ** ************* * .

110. spacer 9.3|3960036|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NC_012970 (Methylovorus glucosetrophus SIP3-4 plasmid pMsip01, complete sequence) position: , mismatch: 9, identity: 0.719 

tggatcagctggttcaatcgtttacagcactg	CRISPR spacer
gtacacggctggttcaatcgcttactgcacgg	Protospacer
  .  *.*************.**** **** *

111. spacer 9.5|3960158|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019826 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-3, complete sequence) position: , mismatch: 9, identity: 0.719 

tcgaaaaacttcgtcctgaaaaaattcatcat	CRISPR spacer
ttctttcatttcttcttgaaaaaattcatcat	Protospacer
*.     *.*** **.****************

112. spacer 9.7|3960280|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to MN693721 (Marine virus AFVG_250M181, complete genome) position: , mismatch: 9, identity: 0.719 

ccggtgcaactgatattgataaacgtcgactc	CRISPR spacer
tgggtggaactgatattgctaaacggagagaa	Protospacer
. **** *********** ******  **

113. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

114. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

115. spacer 5.1|2127091|38|NZ_CP010171|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737 

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

116. spacer 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688 

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctccccaagtgccg	Protospacer
 *******.************ ***.   ..

117. spacer 8.8|3932533|32|NZ_CP010171|CRISPRCasFinder matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688 

gtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
ttgtttgcagcattaacgctctccaagtgccg	Protospacer
 *******.************ ***.   ..

118. spacer 9.4|3960097|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025114 (Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

tcgttcgaggcgtttcgcgcctgggcgattat	CRISPR spacer
catcccgaggcgttgcgcggctgggcgatccc	Protospacer
.  ..********* **** *********. .

119. spacer 9.6|3960219|32|NZ_CP010171|PILER-CR,CRISPRCasFinder,CRT matches to MK613349 (Roseobacter phage CRP-7, complete genome) position: , mismatch: 10, identity: 0.688 

gcagtaaattatttgacctcgttgataatccc	CRISPR spacer
cttagatataatttgccctcgttgataatcaa	Protospacer
 . . * ** ***** **************

120. spacer 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

121. spacer 8.2|3932532|33|NZ_CP010171|PILER-CR,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667 

tgtgtttgcggcattaacgctcaccagcatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 368228 : 475218 106 Enterobacteria_phage(39.62%) tail,portal,lysis,terminase,protease,integrase attL 451451:451465|attR 476963:476977
DBSCAN-SWA_2 646898 : 688815 44 Escherichia_phage(46.88%) tRNA,lysis,terminase,holin,integrase attL 650691:650707|attR 694413:694429
DBSCAN-SWA_3 1136227 : 1223699 92 Salmonella_phage(57.63%) tail,tRNA,lysis,portal,head,terminase,protease,capsid,integrase,plate attL 1129190:1129205|attR 1226270:1226285
DBSCAN-SWA_4 1759763 : 1877212 137 Shigella_phage(39.76%) tail,transposase,lysis,portal,head,terminase,capsid,protease,holin,integrase,plate attL 1831811:1831856|attR 1873311:1873356
DBSCAN-SWA_5 1887274 : 1953057 57 uncultured_Caudovirales_phage(20.0%) transposase,plate,tRNA NA
DBSCAN-SWA_6 3967888 : 3981071 12 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_7 4060692 : 4072098 12 Enterobacteria_phage(70.0%) integrase attL 4059679:4059692|attR 4072224:4072237
DBSCAN-SWA_8 4607357 : 4616799 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_9 4711364 : 4718887 7 Enterobacteria_phage(42.86%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage