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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010181 Escherichia coli strain M1 plasmid A, complete sequence 0 crisprs cas14j,RT,WYL 0 0 1 0
NZ_CP010180 Escherichia coli strain M1 chromosome, complete genome 4 crisprs c2c9_V-U4,DEDDh,RT,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,WYL 0 30 11 0
NZ_CP010182 Escherichia coli strain M1 plasmid B, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP010181
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 10757 : 64591 44 Enterobacteria_phage(30.77%) plate,transposase,protease,integrase attL 19168:19184|attR 59726:59742

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP010180
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010180_1 1682982-1684451 TypeI-E I-E
23 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010180_2 1710150-1711459 Unclear I-E
21 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010180_3 4484856-4484995 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010180_4 4604643-4604791 Orphan I-F
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010180_1 1.3|1683133|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683133-1683164 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246449-246480 2 0.938
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP053858 Rhizobium pusense strain 76 plasmid pR76, complete sequence 455664-455695 5 0.844
NZ_CP010180_2 2.5|1710423|32|NZ_CP010180|CRISPRCasFinder,CRT 1710423-1710454 32 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 632328-632359 5 0.844
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP038925 Piscirickettsia salmonis strain Psal-011 plasmid unnamed2, complete sequence 67773-67804 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP038813 Piscirickettsia salmonis strain Psal-001 plasmid unnamed2, complete sequence 67772-67803 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP033943 Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-6, complete sequence 12989-13020 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP013780 Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence 23366-23397 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP013780 Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence 106638-106669 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP038915 Piscirickettsia salmonis strain Psal-010a plasmid unnamed2, complete sequence 67772-67803 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP038934 Piscirickettsia salmonis strain Psal-025 plasmid unnamed2, complete sequence 68061-68092 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP038974 Piscirickettsia salmonis strain Psal-069 plasmid unnamed2, complete sequence 2467-2498 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP038888 Piscirickettsia salmonis strain Psal-004 plasmid unnamed2, complete sequence 67774-67805 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP039216 Piscirickettsia salmonis strain Psal-104a plasmid unnamed2, complete sequence 2467-2498 7 0.781
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_CP038878 Piscirickettsia salmonis strain Psal-002 plasmid unnamed2, complete sequence 67773-67804 7 0.781
NZ_CP010180_1 1.8|1683438|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683438-1683469 32 AP013502 Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S23-C10 12423-12454 7 0.781
NZ_CP010180_1 1.8|1683438|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683438-1683469 32 AP013504 Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S34-C29 11382-11413 7 0.781
NZ_CP010180_1 1.8|1683438|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683438-1683469 32 AP014448 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S35-C81, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces 27318-27349 7 0.781
NZ_CP010180_1 1.8|1683438|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683438-1683469 32 GU943055 Uncultured phage MedDCM-OCT-S04-C26 genomic sequence 10843-10874 7 0.781
NZ_CP010180_1 1.21|1684269|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1684269-1684300 32 NZ_CP022605 Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence 568898-568929 7 0.781
NZ_CP010180_2 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT 1710545-1710576 32 NZ_CP010860 Marinovum algicola DG 898 plasmid pMaD5, complete sequence 101414-101445 7 0.781
NZ_CP010180_2 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT 1710667-1710698 32 NZ_CP032695 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence 1028485-1028516 7 0.781
NZ_CP010180_2 2.10|1710728|32|NZ_CP010180|CRISPRCasFinder,CRT 1710728-1710759 32 MH807820 Dickeya phage Coodle, complete genome 4693-4724 7 0.781
NZ_CP010180_2 2.10|1710728|32|NZ_CP010180|CRISPRCasFinder,CRT 1710728-1710759 32 MT857002 Salmonella phage pSal-SNUABM-02, complete genome 39215-39246 7 0.781
NZ_CP010180_2 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT 1711216-1711247 32 NZ_CP032323 Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence 468691-468722 7 0.781
NZ_CP010180_2 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT 1711216-1711247 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 428674-428705 7 0.781
NZ_CP010180_2 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT 1711216-1711247 32 NZ_CP007795 Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence 628096-628127 7 0.781
NZ_CP010180_2 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT 1711216-1711247 32 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 768678-768709 7 0.781
NZ_CP010180_1 1.1|1683011|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683011-1683042 32 HM029250 Lactococcus phage 949, complete genome 55071-55102 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NC_003037 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence 270741-270772 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NC_017327 Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence 1429126-1429157 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP021798 Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence 450512-450543 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NC_017324 Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence 1363718-1363749 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP009145 Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence 259589-259620 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP021801 Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence 156145-156176 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP021819 Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence 108131-108162 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP021824 Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence 136871-136902 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP021813 Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence 308731-308762 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NC_018683 Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence 386165-386196 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP021794 Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence 1141409-1141440 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP021809 Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence 239251-239282 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP021217 Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence 1491172-1491203 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP026526 Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence 173783-173814 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP019483 Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence 251909-251940 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NZ_CP019486 Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence 227862-227893 8 0.75
NZ_CP010180_1 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683316-1683347 32 NC_020527 Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence 270403-270434 8 0.75
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 MN693954 Marine virus AFVG_250M569, complete genome 38213-38244 8 0.75
NZ_CP010180_1 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1683903-1683934 32 NZ_CP042998 Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence 10981-11012 8 0.75
NZ_CP010180_1 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1684025-1684056 32 KY555145 Caulobacter phage Ccr29, complete genome 57425-57456 8 0.75
NZ_CP010180_1 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1684025-1684056 32 KY555143 Caulobacter phage Ccr2, complete genome 52892-52923 8 0.75
NZ_CP010180_1 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1684025-1684056 32 NC_019407 Caulobacter phage CcrMagneto, complete genome 51760-51791 8 0.75
NZ_CP010180_1 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1684025-1684056 32 KY555144 Caulobacter phage Ccr5, complete genome 52344-52375 8 0.75
NZ_CP010180_1 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1684025-1684056 32 KY555142 Caulobacter phage Ccr10, complete genome 52417-52448 8 0.75
NZ_CP010180_2 2.1|1710179|32|NZ_CP010180|CRISPRCasFinder,CRT 1710179-1710210 32 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 1326-1357 8 0.75
NZ_CP010180_2 2.2|1710240|32|NZ_CP010180|CRISPRCasFinder,CRT 1710240-1710271 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
NZ_CP010180_2 2.5|1710423|32|NZ_CP010180|CRISPRCasFinder,CRT 1710423-1710454 32 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 460575-460606 8 0.75
NZ_CP010180_2 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT 1710545-1710576 32 NZ_CP010410 Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence 347166-347197 8 0.75
NZ_CP010180_2 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT 1710667-1710698 32 KX752698 Mycobacterium phage Tonenili, complete genome 136893-136924 8 0.75
NZ_CP010180_2 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT 1711216-1711247 32 NC_010811 Ralstonia phage RSL1, complete genome 67286-67317 8 0.75
NZ_CP010180_2 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT 1711216-1711247 32 AB366653 Ralstonia phage RSL1 DNA, complete genome 67286-67317 8 0.75
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 MT857002 Salmonella phage pSal-SNUABM-02, complete genome 39215-39248 8 0.765
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 MH807820 Dickeya phage Coodle, complete genome 4691-4724 8 0.765
NZ_CP010180_1 1.5|1683255|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683255-1683286 32 MT708550 Achromobacter phage Mano, complete genome 2686-2717 9 0.719
NZ_CP010180_1 1.11|1683622|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683622-1683653 32 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 97609-97640 9 0.719
NZ_CP010180_1 1.11|1683622|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683622-1683653 32 NZ_CP035233 Bacillus glycinifermentans strain SRCM103574 plasmid unnamed1, complete sequence 14374-14405 9 0.719
NZ_CP010180_1 1.12|1683683|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683683-1683714 32 NZ_CP029096 Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence 245017-245048 9 0.719
NZ_CP010180_1 1.12|1683683|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683683-1683714 32 MF344569 Pseudomonas aeruginosa plasmid p12939-PER, complete sequence 267220-267251 9 0.719
NZ_CP010180_1 1.12|1683683|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683683-1683714 32 NZ_MH547560 Pseudomonas aeruginosa strain PA34 plasmid pMKPA34-1, complete sequence 83416-83447 9 0.719
NZ_CP010180_1 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1683903-1683934 32 NC_013856 Azospirillum sp. B510 plasmid pAB510b, complete sequence 24517-24548 9 0.719
NZ_CP010180_1 1.21|1684269|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1684269-1684300 32 NZ_CP016500 Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence 217061-217092 9 0.719
NZ_CP010180_2 2.4|1710362|32|NZ_CP010180|CRISPRCasFinder,CRT 1710362-1710393 32 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 224876-224907 9 0.719
NZ_CP010180_2 2.5|1710423|32|NZ_CP010180|CRISPRCasFinder,CRT 1710423-1710454 32 NZ_CP006988 Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence 91348-91379 9 0.719
NZ_CP010180_2 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT 1710545-1710576 32 NZ_CP029777 Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence 89227-89258 9 0.719
NZ_CP010180_2 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT 1710545-1710576 32 NZ_CP021083 Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence 361520-361551 9 0.719
NZ_CP010180_2 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT 1710667-1710698 32 NZ_CP039905 Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence 175988-176019 9 0.719
NZ_CP010180_2 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT 1710667-1710698 32 NZ_CP039909 Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence 115836-115867 9 0.719
NZ_CP010180_2 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT 1710667-1710698 32 NZ_LS974446 Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence 14981-15012 9 0.719
NZ_CP010180_2 2.13|1710911|32|NZ_CP010180|CRISPRCasFinder,CRT 1710911-1710942 32 AP014303 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S29-C153, *** SEQUENCING IN PROGRESS *** 4922-4953 9 0.719
NZ_CP010180_2 2.20|1711338|32|NZ_CP010180|CRISPRCasFinder,CRT 1711338-1711369 32 MH719082 Escherichia phage vB_EcoM_IME392, complete genome 494-525 9 0.719
NZ_CP010180_2 2.25|1710421|34|NZ_CP010180|PILER-CR 1710421-1710454 34 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 460575-460608 9 0.735
NZ_CP010180_2 2.27|1710543|34|NZ_CP010180|PILER-CR 1710543-1710576 34 NZ_CP010860 Marinovum algicola DG 898 plasmid pMaD5, complete sequence 101414-101447 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 NZ_CP012594 Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence 4619-4652 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 NZ_CP042347 Staphylococcus aureus strain BSN9S plasmid pSaBSN9, complete sequence 22354-22387 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 NZ_AP018563 Staphylococcus argenteus strain 58113 plasmid p1, complete sequence 22950-22983 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 CP030569 Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence 17479-17512 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 CP030458 Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence 20191-20224 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 NZ_AP017923 Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence 22374-22407 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 NC_013325 Staphylococcus aureus plasmid pWBG745, complete sequence 17627-17660 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 CP030710 Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence 12086-12119 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 NZ_CP047857 Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence 31421-31454 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 NZ_MH587574 Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence 22381-22414 9 0.735
NZ_CP010180_2 2.30|1710726|34|NZ_CP010180|PILER-CR 1710726-1710759 34 CP030603 Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence 2030-2063 9 0.735
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 248908-248939 10 0.688
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 NZ_LR214943 Mycoplasma orale strain NCTC10112 plasmid 4 4361-4392 10 0.688
NZ_CP010180_1 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1683903-1683934 32 NZ_CP017589 Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ08, complete sequence 91030-91061 10 0.688
NZ_CP010180_1 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1683903-1683934 32 MN882551 Butyrivibrio virus Arian, complete genome 24528-24559 10 0.688
NZ_CP010180_1 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1683903-1683934 32 MN882552 Butyrivibrio virus Bo-Finn, complete genome 24295-24326 10 0.688
NZ_CP010180_1 1.21|1684269|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT 1684269-1684300 32 NZ_CP045856 Agrobacterium sp. MA01 plasmid punanmed2, complete sequence 262994-263025 10 0.688
NZ_CP010180_2 2.1|1710179|32|NZ_CP010180|CRISPRCasFinder,CRT 1710179-1710210 32 NZ_CP012383 Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence 14130-14161 10 0.688
NZ_CP010180_2 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT 1710545-1710576 32 NZ_CP019037 Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence 354311-354342 10 0.688
NZ_CP010180_2 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT 1710789-1710820 32 MT856905 Enterococcus phage vB_EfaM_A2, complete genome 20447-20478 10 0.688
NZ_CP010180_2 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT 1710789-1710820 32 MW004544 Enterococcus phage EFGrKN, complete genome 18980-19011 10 0.688
NZ_CP010180_2 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT 1710789-1710820 32 MN241318 Enterococcus phage PEf771, complete genome 101150-101181 10 0.688
NZ_CP010180_2 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT 1710789-1710820 32 NC_029009 Enterococcus phage EFDG1, complete genome 19024-19055 10 0.688
NZ_CP010180_2 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT 1710789-1710820 32 MH880817 Enterococcus phage EfV12-phi1, complete genome 21449-21480 10 0.688
NZ_CP010180_2 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT 1710789-1710820 32 MN027503 Enterococcus phage vB_OCPT_Ben, complete genome 131391-131422 10 0.688
NZ_CP010180_2 2.13|1710911|32|NZ_CP010180|CRISPRCasFinder,CRT 1710911-1710942 32 MK250016 Prevotella phage Lak-A1, complete genome 348544-348575 10 0.688
NZ_CP010180_2 2.25|1710421|34|NZ_CP010180|PILER-CR 1710421-1710454 34 NZ_CP006988 Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence 91346-91379 10 0.706
NZ_CP010180_2 2.38|1711214|34|NZ_CP010180|PILER-CR 1711214-1711247 34 NC_010811 Ralstonia phage RSL1, complete genome 67284-67317 10 0.706
NZ_CP010180_2 2.38|1711214|34|NZ_CP010180|PILER-CR 1711214-1711247 34 AB366653 Ralstonia phage RSL1 DNA, complete genome 67284-67317 10 0.706
NZ_CP010180_1 1.1|1683011|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683011-1683042 32 NC_009760 Bacillus phage 0305phi8-36, complete genome 157057-157088 11 0.656
NZ_CP010180_1 1.4|1683194|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683194-1683225 32 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1789771-1789802 11 0.656
NZ_CP010180_1 1.4|1683194|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683194-1683225 32 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 23490-23521 11 0.656
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 MT074146 Bacteroides phage SJC03, complete genome 43513-43544 11 0.656
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 MT074139 Bacteroides phage DAC19, complete genome 51210-51241 11 0.656
NZ_CP010180_1 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683377-1683408 32 MT074140 Bacteroides phage DAC20, complete genome 51210-51241 11 0.656
NZ_CP010180_1 1.11|1683622|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT 1683622-1683653 32 MF417930 Uncultured Caudovirales phage clone 3S_1, partial genome 23786-23817 11 0.656
NZ_CP010180_2 2.13|1710911|32|NZ_CP010180|CRISPRCasFinder,CRT 1710911-1710942 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1997929-1997960 11 0.656
NZ_CP010180_2 2.24|1710360|34|NZ_CP010180|PILER-CR 1710360-1710393 34 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 224874-224907 11 0.676
NZ_CP010180_2 2.29|1710665|34|NZ_CP010180|PILER-CR 1710665-1710698 34 NZ_CP039905 Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence 175986-176019 11 0.676
NZ_CP010180_2 2.29|1710665|34|NZ_CP010180|PILER-CR 1710665-1710698 34 NZ_CP039909 Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence 115834-115867 11 0.676
NZ_CP010180_2 2.29|1710665|34|NZ_CP010180|PILER-CR 1710665-1710698 34 NZ_LS974446 Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence 14979-15012 11 0.676
NZ_CP010180_2 2.33|1710909|34|NZ_CP010180|PILER-CR 1710909-1710942 34 MK250016 Prevotella phage Lak-A1, complete genome 348544-348577 11 0.676

1. spacer 1.3|1683133|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 2, identity: 0.938 

cttaccacccagacactgatactccacataaa	CRISPR spacer
ctttccacccaggcactgatactccacataaa	Protospacer
*** ********.*******************

2. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053858 (Rhizobium pusense strain 76 plasmid pR76, complete sequence) position: , mismatch: 5, identity: 0.844 

atgtcgagcgcgttgacagctatatt-cgccgt	CRISPR spacer
ttgacgagcgcgtcgacagctatattgcgcca-	Protospacer
 ** *********.************ ****.

3. spacer 2.5|1710423|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 5, identity: 0.844 

gcccgcct-cgtcggtgtattccgcgagatcgc	CRISPR spacer
-ccggcctacgtcgacgtattccgcgagatcgt	Protospacer
 ** **** *****..****************.

4. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038925 (Piscirickettsia salmonis strain Psal-011 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

5. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038813 (Piscirickettsia salmonis strain Psal-001 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

6. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033943 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-6, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

7. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013780 (Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

8. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013780 (Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

9. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038915 (Piscirickettsia salmonis strain Psal-010a plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

10. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038934 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

11. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038974 (Piscirickettsia salmonis strain Psal-069 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

12. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038888 (Piscirickettsia salmonis strain Psal-004 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

13. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039216 (Piscirickettsia salmonis strain Psal-104a plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

14. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038878 (Piscirickettsia salmonis strain Psal-002 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

-gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
ggcgagc-aaatagtaaattaatttataaatat	Protospacer
 **.  * *******************.***

15. spacer 1.8|1683438|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to AP013502 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S23-C10) position: , mismatch: 7, identity: 0.781 

ttcaatggttgcctcttcatcataatatagac	CRISPR spacer
ataaaaggttgcctcttcatcacaatatttaa	Protospacer
 * ** ****************.*****  *

16. spacer 1.8|1683438|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to AP013504 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C14A-MedDCM-OCT-S34-C29) position: , mismatch: 7, identity: 0.781 

ttcaatggttgcctcttcatcataatatagac	CRISPR spacer
ataaaaggttgcctcttcatcacaatatttaa	Protospacer
 * ** ****************.*****  *

17. spacer 1.8|1683438|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to AP014448 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C14A-MedDCM-OCT-S35-C81, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 7, identity: 0.781 

ttcaatggttgcctcttcatcataatatagac	CRISPR spacer
ataaaaggttgcctcttcatcacaatatttaa	Protospacer
 * ** ****************.*****  *

18. spacer 1.8|1683438|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to GU943055 (Uncultured phage MedDCM-OCT-S04-C26 genomic sequence) position: , mismatch: 7, identity: 0.781 

ttcaatggttgcctcttcatcataatatagac	CRISPR spacer
ataaaaggttgcctcttcatcacaatatttaa	Protospacer
 * ** ****************.*****  *

19. spacer 1.21|1684269|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

gcttttccccacgcgtccagatct--tcaacggg	CRISPR spacer
acttatcgccacgcgtccagatctcgtgaacc--	Protospacer
.*** ** ****************  * ***

20. spacer 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 7, identity: 0.781 

atcaacatgcagcgcgaacggctg---cccctcgc	CRISPR spacer
atccacatgcagctcgaacggctgaaatcgct---	Protospacer
*** ********* **********   .* **

21. spacer 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 7, identity: 0.781 

ataaac-tttccgccgatctcaagagcggcacg	CRISPR spacer
-caaacgacaccgccgatctcaagaacgccacg	Protospacer
 .****  . ***************.** ****

22. spacer 2.10|1710728|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MH807820 (Dickeya phage Coodle, complete genome) position: , mismatch: 7, identity: 0.781 

ctcaaaaaacttgaaatcaaaaccgttgaaga---	CRISPR spacer
gtcaagaaagttgaaatcaaaacc---gaagcccc	Protospacer
 ****.*** **************   ****

23. spacer 2.10|1710728|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MT857002 (Salmonella phage pSal-SNUABM-02, complete genome) position: , mismatch: 7, identity: 0.781 

ctcaaaaaacttgaaatcaaaaccgttgaaga---	CRISPR spacer
gtcaagaaagttgaaatcaaaacc---gaagcccc	Protospacer
 ****.*** **************   ****

24. spacer 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781 

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cggatcatggtggaaaccaactggcccggcgc	Protospacer
* *.***************** * *****..

25. spacer 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781 

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cggatcatggtggaaaccaactggcccggcgc	Protospacer
* *.***************** * *****..

26. spacer 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 7, identity: 0.781 

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cggatcatggtggaaaccaactggcccggcgc	Protospacer
* *.***************** * *****..

27. spacer 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781 

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cggatcatggtggaaaccaactggcccggcgc	Protospacer
* *.***************** * *****..

28. spacer 1.1|1683011|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to HM029250 (Lactococcus phage 949, complete genome) position: , mismatch: 8, identity: 0.75 

cagat---tatcttctttttcaatccagccaccga	CRISPR spacer
---atctatctcttctttttctgtccagccaccat	Protospacer
   **   * *********** .**********.

29. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

30. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

31. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

32. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

33. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

34. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

35. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

36. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

37. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

38. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

39. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

40. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

41. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

42. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

43. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

44. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

45. spacer 1.6|1683316|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75 

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

46. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to MN693954 (Marine virus AFVG_250M569, complete genome) position: , mismatch: 8, identity: 0.75 

gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
tcaagaaaaatagtaaattcaattatgaatct	Protospacer
 **   ************* * ********.

47. spacer 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP042998 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence) position: , mismatch: 8, identity: 0.75 

gtgtctgccagcgcgtcgccctctcctccacg	CRISPR spacer
tcttctgccagcgcgtctcccgctcctgctgg	Protospacer
 . ************** *** ***** *  *

48. spacer 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to KY555145 (Caulobacter phage Ccr29, complete genome) position: , mismatch: 8, identity: 0.75 

tatccagt-acccgccagcgggtttactgacgg	CRISPR spacer
-acgaaacgacccgccagcgggattgctgacgg	Protospacer
 *.  *.. ************* **.*******

49. spacer 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to KY555143 (Caulobacter phage Ccr2, complete genome) position: , mismatch: 8, identity: 0.75 

tatccagt-acccgccagcgggtttactgacgg	CRISPR spacer
-acgaaacgacccgccagcgggattgctgacgg	Protospacer
 *.  *.. ************* **.*******

50. spacer 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to NC_019407 (Caulobacter phage CcrMagneto, complete genome) position: , mismatch: 8, identity: 0.75 

tatccagt-acccgccagcgggtttactgacgg	CRISPR spacer
-acgaaacgacccgccagcgggattgctgacgg	Protospacer
 *.  *.. ************* **.*******

51. spacer 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to KY555144 (Caulobacter phage Ccr5, complete genome) position: , mismatch: 8, identity: 0.75 

tatccagt-acccgccagcgggtttactgacgg	CRISPR spacer
-acgaaacgacccgccagcgggattgctgacgg	Protospacer
 *.  *.. ************* **.*******

52. spacer 1.17|1684025|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to KY555142 (Caulobacter phage Ccr10, complete genome) position: , mismatch: 8, identity: 0.75 

tatccagt-acccgccagcgggtttactgacgg	CRISPR spacer
-acgaaacgacccgccagcgggattgctgacgg	Protospacer
 *.  *.. ************* **.*******

53. spacer 2.1|1710179|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

aacatcggaaacggcttcgcagcggcggcgtc	CRISPR spacer
agtggcggaaacggcttcgcagcgtcagcgcg	Protospacer
*... ******************* *.***.

54. spacer 2.2|1710240|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75 

-gacagaacggcctcagtagtctcgtcaggctc	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggctt	Protospacer
  ** *  .****.******.***********.

55. spacer 2.5|1710423|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

gcccgcctcgtcggtgtattccgcgagatcgc	CRISPR spacer
cgtcgcctcgtcggcgtattccgccagcaggc	Protospacer
  .***********.********* **   **

56. spacer 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75 

atcaaca--tgcagcgcgaacggctgcccctcgc	CRISPR spacer
--cagcgcctgcagcgcgaacggctgcgactcca	Protospacer
  **.*.  ******************  ***

57. spacer 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT matches to KX752698 (Mycobacterium phage Tonenili, complete genome) position: , mismatch: 8, identity: 0.75 

ataaactttccgccgatctcaagagcggcacg	CRISPR spacer
acctgctttccgccaagctcaagagcggtgcg	Protospacer
*.  .*********.* ***********..**

58. spacer 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NC_010811 (Ralstonia phage RSL1, complete genome) position: , mismatch: 8, identity: 0.75 

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
tggaatctggtggaaaccaacggtccgggtac	Protospacer
. *. . ******************* ****

59. spacer 2.18|1711216|32|NZ_CP010180|CRISPRCasFinder,CRT matches to AB366653 (Ralstonia phage RSL1 DNA, complete genome) position: , mismatch: 8, identity: 0.75 

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
tggaatctggtggaaaccaacggtccgggtac	Protospacer
. *. . ******************* ****

60. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to MT857002 (Salmonella phage pSal-SNUABM-02, complete genome) position: , mismatch: 8, identity: 0.765 

acctcaaaaaacttgaaatcaaaaccgttgaaga---	CRISPR spacer
aagtcaagaaagttgaaatcaaaacc---gaagcccc	Protospacer
*  ****.*** **************   ****

61. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to MH807820 (Dickeya phage Coodle, complete genome) position: , mismatch: 8, identity: 0.765 

acctcaaaaaacttgaaatcaaaaccgttgaaga---	CRISPR spacer
aagtcaagaaagttgaaatcaaaacc---gaagcccc	Protospacer
*  ****.*** **************   ****

62. spacer 1.5|1683255|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to MT708550 (Achromobacter phage Mano, complete genome) position: , mismatch: 9, identity: 0.719 

gcaaattaccgccgggctaacgtttgatctca	CRISPR spacer
tagcattaccgccgggcttacctttgaccgcc	Protospacer
  . ************** ** *****.* *

63. spacer 1.11|1683622|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 9, identity: 0.719 

cgactttatgttatcccaatatatttcactgt	CRISPR spacer
actctttctgttattccaatatatttaatagc	Protospacer
   **** ******.*********** *. *.

64. spacer 1.11|1683622|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035233 (Bacillus glycinifermentans strain SRCM103574 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

cgactttatgttatcccaatatatttcactgt	CRISPR spacer
tcatcgtccgttatcccaatatatttaagtgt	Protospacer
. *.. * .***************** * ***

65. spacer 1.12|1683683|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029096 (Pseudomonas aeruginosa strain AR439 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719 

agcccacgcgcgctcttcgcgccagttagcaa	CRISPR spacer
ttcgccaccgcgctctttgcgccaggtagcag	Protospacer
  * *   *********.******* *****.

66. spacer 1.12|1683683|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to MF344569 (Pseudomonas aeruginosa plasmid p12939-PER, complete sequence) position: , mismatch: 9, identity: 0.719 

agcccacgcgcgctcttcgcgccagttagcaa	CRISPR spacer
ttcgccaccgcgctctttgcgccaggtagcag	Protospacer
  * *   *********.******* *****.

67. spacer 1.12|1683683|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH547560 (Pseudomonas aeruginosa strain PA34 plasmid pMKPA34-1, complete sequence) position: , mismatch: 9, identity: 0.719 

agcccacgcgcgctcttcgcgccagttagcaa	CRISPR spacer
ttcgccaccgcgctctttgcgccaggtagcag	Protospacer
  * *   *********.******* *****.

68. spacer 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 9, identity: 0.719 

gtgtctgccagcgcgtcgccctctcctccacg	CRISPR spacer
aaagcggcctgcgcgtcgccccctcctccatc	Protospacer
. . * *** ***********.********.

69. spacer 1.21|1684269|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP016500 (Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcttttccccacgcgtccagatcttcaacggg	CRISPR spacer
cattttcccaacgcggccagatcttgtctgcg	Protospacer
  ******* ***** *********   .* *

70. spacer 2.4|1710362|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ggcatagccaggctgatccggcgacggcctta	CRISPR spacer
gcagcagaccggctgatccggcgacggccccg	Protospacer
*  ..** * *******************...

71. spacer 2.5|1710423|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 9, identity: 0.719 

gcccgcctcgtcggtgtattccgcgagatcgc	CRISPR spacer
taccgcctcgtcgatgtaatccgcgacgtgcg	Protospacer
  ***********.**** ******* .*

72. spacer 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719 

atcaacatgcagcgcgaacggctgcccctcgc	CRISPR spacer
caggagttccagcgcgaacggcagcgcctcgc	Protospacer
   .*  * ************* ** ******

73. spacer 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 9, identity: 0.719 

atcaacatgcagcgcgaacggctgcccctcgc	CRISPR spacer
gccttcgagcagcgccagcggctgcccctcga	Protospacer
..*  *. ******* *.*************

74. spacer 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 9, identity: 0.719 

ataaactttccgccgatctcaagagcggcacg	CRISPR spacer
gcggcctttccaccgatctcaagcgcggcgcc	Protospacer
.... ******.*********** *****.*

75. spacer 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP039909 (Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence) position: , mismatch: 9, identity: 0.719 

ataaactttccgccgatctcaagagcggcacg	CRISPR spacer
gcggcctttccaccgatctcaagcgcggcgcc	Protospacer
.... ******.*********** *****.*

76. spacer 2.9|1710667|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_LS974446 (Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719 

ataaactttccgccgatctcaagagcggcacg	CRISPR spacer
gcggcctttccaccgatctcaagcgcggcgcc	Protospacer
.... ******.*********** *****.*

77. spacer 2.13|1710911|32|NZ_CP010180|CRISPRCasFinder,CRT matches to AP014303 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S29-C153, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719 

atatcagcgttatcaaccgcgatttccgtctc	CRISPR spacer
gcagcagctttatcaaccgcgacttcctcgcc	Protospacer
..* **** *************.**** . .*

78. spacer 2.20|1711338|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MH719082 (Escherichia phage vB_EcoM_IME392, complete genome) position: , mismatch: 9, identity: 0.719 

cccattaagattttgcagggtaagtgtgatct	CRISPR spacer
tcagttaagactttgctgggtaagtgtaacga	Protospacer
.* .******.***** **********.*.

79. spacer 2.25|1710421|34|NZ_CP010180|PILER-CR matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735 

acgcccgcctcgtcggtgtattccgcgagatcgc	CRISPR spacer
agcgtcgcctcgtcggcgtattccgccagcaggc	Protospacer
*   .***********.********* **   **

80. spacer 2.27|1710543|34|NZ_CP010180|PILER-CR matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 9, identity: 0.735 

acatcaacatgcagcgcgaacggctg---cccctcgc	CRISPR spacer
cgatccacatgcagctcgaacggctgaaatcgct---	Protospacer
  *** ********* **********   .* **

81. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to NZ_CP012594 (Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

82. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to NZ_CP042347 (Staphylococcus aureus strain BSN9S plasmid pSaBSN9, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

83. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to NZ_AP018563 (Staphylococcus argenteus strain 58113 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

84. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to CP030569 (Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

85. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to CP030458 (Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

86. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to NZ_AP017923 (Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

87. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to NC_013325 (Staphylococcus aureus plasmid pWBG745, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

88. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to CP030710 (Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

89. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to NZ_CP047857 (Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

90. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to NZ_MH587574 (Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

91. spacer 2.30|1710726|34|NZ_CP010180|PILER-CR matches to CP030603 (Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735 

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***

92. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 10, identity: 0.688 

gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
aatctcaaaatattaaattaattgatttagga	Protospacer
.  ********* ********** **  *  .

93. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214943 (Mycoplasma orale strain NCTC10112 plasmid 4) position: , mismatch: 10, identity: 0.688 

gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
aatatgaaaacagtacattaatttatgaaaac	Protospacer
.   * ****.**** *************

94. spacer 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP017589 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ08, complete sequence) position: , mismatch: 10, identity: 0.688 

gtgtctgccagcgcgtcgccctctcctccacg	CRISPR spacer
atgtctgccagcgcgttgcccactttgctttt	Protospacer
.***************.**** **.. *. .

95. spacer 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to MN882551 (Butyrivibrio virus Arian, complete genome) position: , mismatch: 10, identity: 0.688 

gtgtctgccagcgcgtcgccctctcctccacg	CRISPR spacer
caatctgtcggcgcgtcgccctctccaaaaat	Protospacer
  .****.*.****************   *

96. spacer 1.15|1683903|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to MN882552 (Butyrivibrio virus Bo-Finn, complete genome) position: , mismatch: 10, identity: 0.688 

gtgtctgccagcgcgtcgccctctcctccacg	CRISPR spacer
caatctgtcggcgcgtcgccctctccaaaaat	Protospacer
  .****.*.****************   *

97. spacer 1.21|1684269|32|NZ_CP010180|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP045856 (Agrobacterium sp. MA01 plasmid punanmed2, complete sequence) position: , mismatch: 10, identity: 0.688 

gcttttccccacgcgtccagatcttcaacggg	CRISPR spacer
cattttcccaacgcggccagatcttgtctgca	Protospacer
  ******* ***** *********   .* .

98. spacer 2.1|1710179|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688 

aacatcggaaacggcttcgcagcggcggcgtc	CRISPR spacer
gaggacggaagcggcttcgccgcggcgggcaa	Protospacer
.* . *****.********* *******

99. spacer 2.7|1710545|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688 

atcaacatgcagcgcgaacggctgcccctcgc	CRISPR spacer
ggtttcattcatcgcgaacggctgccccggga	Protospacer
. .  *** ** ****************  *

100. spacer 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MT856905 (Enterococcus phage vB_EfaM_A2, complete genome) position: , mismatch: 10, identity: 0.688 

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****

101. spacer 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MW004544 (Enterococcus phage EFGrKN, complete genome) position: , mismatch: 10, identity: 0.688 

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****

102. spacer 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MN241318 (Enterococcus phage PEf771, complete genome) position: , mismatch: 10, identity: 0.688 

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****

103. spacer 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NC_029009 (Enterococcus phage EFDG1, complete genome) position: , mismatch: 10, identity: 0.688 

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgaa	Protospacer
*. .******** ******** *****

104. spacer 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MH880817 (Enterococcus phage EfV12-phi1, complete genome) position: , mismatch: 10, identity: 0.688 

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****

105. spacer 2.11|1710789|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MN027503 (Enterococcus phage vB_OCPT_Ben, complete genome) position: , mismatch: 10, identity: 0.688 

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****

106. spacer 2.13|1710911|32|NZ_CP010180|CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 10, identity: 0.688 

atatcagcgttatcaaccgcgatttccgtctc	CRISPR spacer
atatcatctttatcaaccgcgataagaaagta	Protospacer
****** * **************    .  *

107. spacer 2.25|1710421|34|NZ_CP010180|PILER-CR matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 10, identity: 0.706 

acgcccgcctcgtcggtgtattccgcgagatcgc	CRISPR spacer
agtaccgcctcgtcgatgtaatccgcgacgtgcg	Protospacer
*   ***********.**** ******* .*

108. spacer 2.38|1711214|34|NZ_CP010180|PILER-CR matches to NC_010811 (Ralstonia phage RSL1, complete genome) position: , mismatch: 10, identity: 0.706 

acctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cttggaatctggtggaaaccaacggtccgggtac	Protospacer
 .. *. . ******************* ****

109. spacer 2.38|1711214|34|NZ_CP010180|PILER-CR matches to AB366653 (Ralstonia phage RSL1 DNA, complete genome) position: , mismatch: 10, identity: 0.706 

acctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cttggaatctggtggaaaccaacggtccgggtac	Protospacer
 .. *. . ******************* ****

110. spacer 1.1|1683011|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NC_009760 (Bacillus phage 0305phi8-36, complete genome) position: , mismatch: 11, identity: 0.656 

cagattatcttctttttcaatccagccaccga	CRISPR spacer
ttgattatcttcttcttcaatcgagatgagcg	Protospacer
. ************.******* ** ..   .

111. spacer 1.4|1683194|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 11, identity: 0.656 

tcacgcggagtgagacggcgtacgagcattgc	CRISPR spacer
aggagcggagtgtgaaggcgtacgagcccact	Protospacer
  . ******** ** *********** .  .

112. spacer 1.4|1683194|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 11, identity: 0.656 

tcacgcggagtgagacggcgtacgagcattgc	CRISPR spacer
aggagcggagtgtgaaggcgtacgagcccact	Protospacer
  . ******** ** *********** .  .

113. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 11, identity: 0.656 

gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
aattaaaaaatagtaaattgatttataaaact	Protospacer
.  .  *************.******.** .

114. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 11, identity: 0.656 

gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
aattaaaaaatagtaaattgatttataaaact	Protospacer
.  .  *************.******.** .

115. spacer 1.7|1683377|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 11, identity: 0.656 

gcactcaaaatagtaaattaatttatgaattg	CRISPR spacer
aattaaaaaatagtaaattgatttataaaact	Protospacer
.  .  *************.******.** .

116. spacer 1.11|1683622|32|NZ_CP010180|PILER-CR,CRISPRCasFinder,CRT matches to MF417930 (Uncultured Caudovirales phage clone 3S_1, partial genome) position: , mismatch: 11, identity: 0.656 

cgactttatgttatcccaatatatttcactgt	CRISPR spacer
atcctttattttttcccaatatattttctcac	Protospacer
   ****** ** *************. ....

117. spacer 2.13|1710911|32|NZ_CP010180|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656 

atatcagcgttatcaaccgcgatttccgtctc	CRISPR spacer
gcgcttccgttatcatccgcgagttccgtcaa	Protospacer
.....  ******** ****** *******

118. spacer 2.24|1710360|34|NZ_CP010180|PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676 

tcggcatagccaggctgatccggcgacggcctta	CRISPR spacer
gagcagcagaccggctgatccggcgacggccccg	Protospacer
  *  ..** * *******************...

119. spacer 2.29|1710665|34|NZ_CP010180|PILER-CR matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 11, identity: 0.676 

acataaactttccgccgatctcaagagcggcacg	CRISPR spacer
ttgcggcctttccaccgatctcaagcgcggcgcc	Protospacer
 ..... ******.*********** *****.*

120. spacer 2.29|1710665|34|NZ_CP010180|PILER-CR matches to NZ_CP039909 (Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence) position: , mismatch: 11, identity: 0.676 

acataaactttccgccgatctcaagagcggcacg	CRISPR spacer
ttgcggcctttccaccgatctcaagcgcggcgcc	Protospacer
 ..... ******.*********** *****.*

121. spacer 2.29|1710665|34|NZ_CP010180|PILER-CR matches to NZ_LS974446 (Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676 

acataaactttccgccgatctcaagagcggcacg	CRISPR spacer
ttgcggcctttccaccgatctcaagcgcggcgcc	Protospacer
 ..... ******.*********** *****.*

122. spacer 2.33|1710909|34|NZ_CP010180|PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 11, identity: 0.676 

acatatcagcgttatcaaccgcgatttccgtctc	CRISPR spacer
tcatatcatctttatcaaccgcgataagaaagta	Protospacer
 ******* * **************    .  *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 170277 : 287065 110 Escherichia_phage(42.11%) tail,terminase,integrase,transposase,lysis,tRNA attL 164661:164677|attR 204905:204921
DBSCAN-SWA_2 811704 : 856410 56 Escherichia_phage(53.66%) tail,terminase,integrase,holin,portal,protease attL 820366:820380|attR 868499:868513
DBSCAN-SWA_3 935971 : 944654 8 Enterobacteria_phage(42.86%) NA NA
DBSCAN-SWA_4 987406 : 998105 12 Enterobacteria_phage(72.73%) tail,integrase,lysis attL 978151:978165|attR 1002264:1002278
DBSCAN-SWA_5 1053206 : 1061515 9 Enterobacteria_phage(83.33%) NA NA
DBSCAN-SWA_6 1659485 : 1666625 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_7 3285013 : 3289792 7 Stx2-converting_phage(50.0%) transposase NA
DBSCAN-SWA_8 3363167 : 3421521 57 Stx2-converting_phage(13.33%) tRNA,protease,integrase,transposase attL 3355938:3355952|attR 3372102:3372116
DBSCAN-SWA_9 3797142 : 3854007 44 uncultured_Mediterranean_phage(14.29%) plate,protease,integrase,tRNA attL 3800805:3800820|attR 3852027:3852042
DBSCAN-SWA_10 3928528 : 4005733 93 Shigella_phage(54.76%) head,tail,capsid,plate,integrase,holin,transposase,protease attL 3988306:3988356|attR 4005822:4005872
DBSCAN-SWA_11 4852222 : 4910521 66 Escherichia_phage(37.78%) head,tail,terminase,capsid,integrase,holin,portal,tRNA attL 4843972:4843989|attR 4895432:4895449

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage