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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010188 Escherichia coli strain M6 plasmid B, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP010189 Escherichia coli strain M6 plasmid C, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP010187 Escherichia coli strain M6 plasmid A, complete sequence 0 crisprs NA 0 0 11 1
NZ_CP010186 Escherichia coli strain M6 chromosome, complete genome 4 crisprs RT,DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e 1 14 9 0
NZ_CP010190 Escherichia coli strain M6 plasmid D, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP010187
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 1501 2 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_2 9479 : 17968 12 Pectobacterium_phage(16.67%) NA NA
DBSCAN-SWA_3 25757 : 25979 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_4 52409 : 53144 1 Xanthomonas_phage(100.0%) NA NA
DBSCAN-SWA_5 56327 : 57413 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_6 66789 : 69721 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_7 80020 : 82210 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_8 91710 : 100427 4 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_9 103440 : 104196 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_10 114736 : 118666 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_11 124632 : 134078 8 Enterobacteria_phage(50.0%) transposase,integrase attL 113397:113410|attR 130563:130576

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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP010187.1|WP_032334873.1|128263_128476_-|hypothetical-protein 128263_128476_- 70 aa aa NA NA NA 124632-134078 yes
2. NZ_CP010186
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010186_1 931360-931451 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010186_2 2825590-2826167 TypeI-E I-E
9 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010186_3 2841669-2842490 TypeI-E I-E
13 spacers
cas3,cas8e,cse2gr11,cas7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010186_4 3156947-3157063 Unclear NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP010186_4 4.2|3157030|16|NZ_CP010186|PILER-CR 3157030-3157045 16 NZ_CP010187.1 130299-130314 2 0.875

1. spacer 4.2|3157030|16|NZ_CP010186|PILER-CR matches to position: 130299-130314, mismatch: 2, identity: 0.875 

ttcatcatttttttcc	CRISPR spacer
ttcagcaattttttcc	Protospacer
**** ** ********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 NC_016160 Escherichia phage HK75, complete genome 28586-28625 1 0.975
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 NC_019705 Enterobacteria phage mEpX2, complete genome 29040-29079 1 0.975
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 NC_019769 Enterobacteria phage HK542, complete genome 29169-29208 1 0.975
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 NC_019719 Enterobacteria phage HK633, complete genome 31734-31773 1 0.975
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 JF974339 Enterobacteria phage IME10, complete genome 9717-9756 1 0.975
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 NC_019715 Enterobacterial phage mEp234, complete genome 30402-30441 2 0.95
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 NC_019711 Enterobacteria phage HK629, complete genome 37163-37202 2 0.95
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 NC_019768 Enterobacteria phage HK106, complete genome 32698-32737 2 0.95
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 KY979108 Escherichia phage ECP1, complete genome 421-460 2 0.95
NZ_CP010186_1 1.1|931386|40|NZ_CP010186|CRISPRCasFinder 931386-931425 40 NC_005344 Enterobacteria phage Sf6, complete genome 28404-28443 2 0.95
NZ_CP010186_2 2.2|2825680|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825680-2825711 32 MK972713 Salmonella phage SW5, complete genome 13980-14011 2 0.938
NZ_CP010186_2 2.2|2825680|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825680-2825711 32 MK972714 Salmonella phage SW3, complete genome 14202-14233 2 0.938
NZ_CP010186_2 2.2|2825680|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825680-2825711 32 NC_049460 Salmonella phage SI7, complete genome 4422-4453 2 0.938
NZ_CP010186_2 2.1|2825619|32|NZ_CP010186|CRT 2825619-2825650 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246937-246968 3 0.906
NZ_CP010186_2 2.9|2826107|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826107-2826138 32 NC_013856 Azospirillum sp. B510 plasmid pAB510b, complete sequence 27818-27849 5 0.844
NZ_CP010186_3 3.7|2842064|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2842064-2842095 32 MG592456 Vibrio phage 1.081.O._10N.286.52.C2, partial genome 219798-219829 6 0.812
NZ_CP010186_2 2.1|2825619|32|NZ_CP010186|CRT 2825619-2825650 32 NZ_CP015038 Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence 112768-112799 7 0.781
NZ_CP010186_2 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825802-2825833 32 CP022460 Shigella sonnei strain 2015C-3807 plasmid unnamed1, complete sequence 32099-32130 7 0.781
NZ_CP010186_2 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825802-2825833 32 NZ_CP015232 Epibacterium mobile F1926 plasmid unnamed2, complete sequence 112025-112056 7 0.781
NZ_CP010186_2 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825802-2825833 32 NZ_LR027555 Epibacterium mobile isolate EPIB1 plasmid 3, complete sequence 90457-90488 7 0.781
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NC_017804 Borreliella garinii BgVir plasmid lp54, complete sequence 27596-27627 7 0.781
NZ_CP010186_3 3.12|2842369|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2842369-2842400 32 AP014324 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C64, *** SEQUENCING IN PROGRESS *** 12836-12867 7 0.781
NZ_CP010186_3 3.12|2842369|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2842369-2842400 32 NC_019515 Bacillus phage BCD7, complete genome 30491-30522 7 0.781
NZ_CP010186_2 2.1|2825619|32|NZ_CP010186|CRT 2825619-2825650 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 1428097-1428128 8 0.75
NZ_CP010186_2 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825802-2825833 32 NZ_CP013856 Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence 81256-81287 8 0.75
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NZ_CP014203 Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence 11893-11924 8 0.75
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NC_015254 Brochothrix phage BL3, complete genome 25082-25113 8 0.75
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NZ_CP024793 Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence 8127-8158 8 0.75
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NZ_CP010112 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence 87042-87073 8 0.75
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NC_018688 Bacillus thuringiensis MC28 plasmid pMC319, complete sequence 169690-169721 8 0.75
NZ_CP010186_3 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841881-2841912 32 NZ_CP038236 Leisingera sp. NJS201 plasmid unnamed2, complete sequence 2813-2844 8 0.75
NZ_CP010186_3 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841881-2841912 32 NZ_CP016463 Bosea sp. RAC05 plasmid pBSY19_1, complete sequence 353558-353589 8 0.75
NZ_CP010186_3 3.12|2842369|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2842369-2842400 32 NZ_CP032678 Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence 17837-17868 8 0.75
NZ_CP010186_2 2.1|2825619|32|NZ_CP010186|CRT 2825619-2825650 32 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 141278-141309 9 0.719
NZ_CP010186_2 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825802-2825833 32 NZ_CP010647 Phaeobacter piscinae strain P36 plasmid pP36_d, complete sequence 70883-70914 9 0.719
NZ_CP010186_2 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825802-2825833 32 NZ_LN907828 Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence 312646-312677 9 0.719
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 CP002494 Enterococcus faecalis 62 plasmid EF62pC, complete sequence 29844-29875 9 0.719
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NZ_CP036247 Enterococcus faecalis R712 plasmid pR712_01, complete sequence 74124-74155 9 0.719
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NC_012654 Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence 14309-14340 9 0.719
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NZ_CP031095 Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence 97821-97852 9 0.719
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 173597-173628 9 0.719
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NZ_CP027191 Lactobacillus sp. CBA3605 plasmid pCBA3605-1, complete sequence 35304-35335 9 0.719
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MK618657 Klebsiella phage Sanco, complete genome 3481-3512 9 0.719
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MK931445 Klebsiella phage Shelby, complete genome 3301-3332 9 0.719
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_048043 Klebsiella phage NJS2, complete genome 4184-4215 9 0.719
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_028774 Klebsiella phage Sushi, complete genome 44600-44631 9 0.719
NZ_CP010186_2 2.9|2826107|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826107-2826138 32 NZ_CP013855 Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence 237562-237593 9 0.719
NZ_CP010186_3 3.1|2841698|32|NZ_CP010186|CRISPRCasFinder,CRT 2841698-2841729 32 MK249151 Blackfly microvirus SF02 isolate 049, complete genome 1908-1939 9 0.719
NZ_CP010186_3 3.3|2841820|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841820-2841851 32 NC_017140 Bacillus megaterium WSH-002 plasmid WSH-002_p2, complete sequence 5097-5128 9 0.719
NZ_CP010186_3 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841881-2841912 32 NZ_CP013541 Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence 1036450-1036481 9 0.719
NZ_CP010186_3 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841881-2841912 32 NZ_CP015881 Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence 1555010-1555041 9 0.719
NZ_CP010186_3 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841881-2841912 32 NZ_CP030263 Ensifer adhaerens strain Corn53 plasmid AA, complete sequence 619383-619414 9 0.719
NZ_CP010186_2 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825802-2825833 32 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 699305-699336 10 0.688
NZ_CP010186_2 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825802-2825833 32 NC_015724 Cupriavidus necator N-1 plasmid pBB2, complete sequence 169020-169051 10 0.688
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 HG796351 Uncultured bacterium plasmid pRGI00631 201-232 10 0.688
NZ_CP010186_2 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2825924-2825955 32 NC_014633 Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence 343912-343943 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MH633486 Klebsiella phage NJS3, complete genome 3939-3970 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_049845 Klebsiella phage PhiKpNIH-2, complete genome 14022-14053 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_049842 Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome 16218-16249 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 LR757892 Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1 8256-8287 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MT894005 Klebsiella phage MMBB, complete genome 23405-23436 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MG552615 Klebsiella virus GML-KpCol1, complete genome 38176-38207 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 KP658157 Klebsiella phage 1513, complete genome 22763-22794 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MH633484 Klebsiella phage TAH8, complete genome 4134-4165 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MK931442 Klebsiella phage Sin4, complete genome 3944-3975 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MH844531 Klebsiella phage GH-K3, complete genome 45731-45762 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_048044 Klebsiella phage NJR15, complete genome 3972-4003 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_048143 Klebsiella phage KpKT21phi1, complete genome 32067-32098 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_049840 Klebsiella phage vB_KpnS_FZ10, complete genome 4384-4415 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_049844 Klebsiella phage 13, complete genome 27889-27920 10 0.688
NZ_CP010186_3 3.1|2841698|32|NZ_CP010186|CRISPRCasFinder,CRT 2841698-2841729 32 NZ_CP038854 Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence 450688-450719 10 0.688
NZ_CP010186_3 3.2|2841759|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841759-2841790 32 NZ_CP039902 Agrobacterium tumefaciens strain CFBP5877 plasmid pTiCFBP5877, complete sequence 33041-33072 10 0.688
NZ_CP010186_3 3.2|2841759|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841759-2841790 32 NZ_CP039893 Agrobacterium tumefaciens strain CFBP5499 plasmid pTiCFBP5499, complete sequence 217865-217896 10 0.688
NZ_CP010186_3 3.2|2841759|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841759-2841790 32 NZ_KY000025 Agrobacterium genomosp. 6 strain AR125 plasmid pTi_AR125, complete sequence 208000-208031 10 0.688
NZ_CP010186_3 3.2|2841759|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841759-2841790 32 NZ_KY000029 Agrobacterium genomosp. 6 strain CFBP5499 plasmid pTi_CFBP5499, complete sequence 208000-208031 10 0.688
NZ_CP010186_3 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841881-2841912 32 NZ_AP014579 Burkholderia sp. RPE67 plasmid p1, complete sequence 823434-823465 10 0.688
NZ_CP010186_3 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2841881-2841912 32 NC_016626 Burkholderia sp. YI23 plasmid byi_1p, complete sequence 682589-682620 10 0.688
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 KY575286 UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome 19060-19091 11 0.656
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 MF415412 Klebsiella phage KPN N141, complete genome 16229-16260 11 0.656
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 JN672684 Enterobacteria phage F20, partial genome 46314-46345 11 0.656
NZ_CP010186_2 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826046-2826077 32 NC_049848 Klebsiella phage KP1801, complete genome 2979-3010 11 0.656
NZ_CP010186_2 2.9|2826107|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder 2826107-2826138 32 NZ_CP041045 Paracoccus sp. AK26 plasmid pAK1, complete sequence 115785-115816 11 0.656
NZ_CP010186_3 3.10|2842247|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2842247-2842278 32 NZ_CP032323 Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence 775203-775234 11 0.656
NZ_CP010186_3 3.10|2842247|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2842247-2842278 32 NZ_CP007795 Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence 332045-332076 11 0.656
NZ_CP010186_3 3.10|2842247|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR 2842247-2842278 32 NC_013859 Azospirillum sp. B510 plasmid pAB510e, complete sequence 184472-184503 11 0.656

1. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to NC_016160 (Escherichia phage HK75, complete genome) position: , mismatch: 1, identity: 0.975 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggctctc	Protospacer
******************************.*********

2. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to NC_019705 (Enterobacteria phage mEpX2, complete genome) position: , mismatch: 1, identity: 0.975 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggctctc	Protospacer
******************************.*********

3. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to NC_019769 (Enterobacteria phage HK542, complete genome) position: , mismatch: 1, identity: 0.975 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acagttgtccaacgcaaacaccagtaatggtgcggctctc	Protospacer
**.*************************************

4. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 1, identity: 0.975 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggctctc	Protospacer
******************************.*********

5. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 1, identity: 0.975 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggctctc	Protospacer
******************************.*********

6. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to NC_019715 (Enterobacterial phage mEp234, complete genome) position: , mismatch: 2, identity: 0.95 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggatctc	Protospacer
******************************.**** ****

7. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 2, identity: 0.95 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcgtctctc	Protospacer
******************************.*** *****

8. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to NC_019768 (Enterobacteria phage HK106, complete genome) position: , mismatch: 2, identity: 0.95 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggatctc	Protospacer
******************************.**** ****

9. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to KY979108 (Escherichia phage ECP1, complete genome) position: , mismatch: 2, identity: 0.95 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acagttgtccaacgcaaacaccagtaatggcgcggctctc	Protospacer
**.***************************.*********

10. spacer 1.1|931386|40|NZ_CP010186|CRISPRCasFinder matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 2, identity: 0.95 

acggttgtccaacgcaaacaccagtaatggtgcggctctc	CRISPR spacer
acgtttgtccaacgcaaacaccagtaatggcgcggctctc	Protospacer
*** **************************.*********

11. spacer 2.2|2825680|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MK972713 (Salmonella phage SW5, complete genome) position: , mismatch: 2, identity: 0.938 

acccgaacggcgaagacgttaacaagggctgg	CRISPR spacer
acccgaacggcgaagacgttaacatcggctgg	Protospacer
************************  ******

12. spacer 2.2|2825680|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MK972714 (Salmonella phage SW3, complete genome) position: , mismatch: 2, identity: 0.938 

acccgaacggcgaagacgttaacaagggctgg	CRISPR spacer
acccgaacggcgaagacgttaacatcggctgg	Protospacer
************************  ******

13. spacer 2.2|2825680|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_049460 (Salmonella phage SI7, complete genome) position: , mismatch: 2, identity: 0.938 

acccgaacggcgaagacgttaacaagggctgg	CRISPR spacer
acccgaacggcgaagacgttaacatcggctgg	Protospacer
************************  ******

14. spacer 2.1|2825619|32|NZ_CP010186|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 3, identity: 0.906 

taagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
caagtgatgtccatcatcgcatccagtgcgtc	Protospacer
.*******.*********************.*

15. spacer 2.9|2826107|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 5, identity: 0.844 

-tgttgtcggcgggtcgggcagtagtcgcgcgc	CRISPR spacer
tcgatg-cggccggtcgggctgtagtcgcgcgc	Protospacer
 .* ** **** ******** ************

16. spacer 3.7|2842064|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to MG592456 (Vibrio phage 1.081.O._10N.286.52.C2, partial genome) position: , mismatch: 6, identity: 0.812 

accatt--acttcggtaaaagcgtgatcaagaat	CRISPR spacer
--cgtcgaacttcagtaaaagcgtgatcaacaat	Protospacer
  *.*.  *****.**************** ***

17. spacer 2.1|2825619|32|NZ_CP010186|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781 

taagtgat-atccatcatcgcatccagtgcgcc	CRISPR spacer
-ggttgatcgtccttcatcgcagccagtgcgcc	Protospacer
 .. **** .*** ******** **********

18. spacer 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to CP022460 (Shigella sonnei strain 2015C-3807 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

tgcataccgtgccagcgccagtgcggcgcggc	CRISPR spacer
catcgaccgcgccagcgccagtgcggcgcggt	Protospacer
...  ****.*********************.

19. spacer 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP015232 (Epibacterium mobile F1926 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

tgcataccgtgccagcgccagtgcggcgcggc	CRISPR spacer
ccgagaccgtgccagcgcctttgcggcgcgcc	Protospacer
.  * **************  ********* *

20. spacer 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR027555 (Epibacterium mobile isolate EPIB1 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.781 

tgcataccgtgccagcgccagtgcggcgcggc	CRISPR spacer
ccgagaccgtgccagcgcctttgcggcgcgcc	Protospacer
.  * **************  ********* *

21. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_017804 (Borreliella garinii BgVir plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.781 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
caattttttgaacttgattttttttaaacttt	Protospacer
************.*** ******..*.*  **

22. spacer 3.12|2842369|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to AP014324 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C64, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781 

ctcaccagttttggggtcaataaccgggggat	CRISPR spacer
cttaccagttttggggtcaataattttctgat	Protospacer
**.********************..    ***

23. spacer 3.12|2842369|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NC_019515 (Bacillus phage BCD7, complete genome) position: , mismatch: 7, identity: 0.781 

ctcaccagttttggggtcaataaccgggggat	CRISPR spacer
ctccccagttttcgggtcaataattggctcat	Protospacer
*** ******** **********..**   **

24. spacer 2.1|2825619|32|NZ_CP010186|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75 

taagtg---atatccatcatcgcatccagtgcgcc	CRISPR spacer
---gtgcgcccctccatcaccgcttccagtgcgcc	Protospacer
   ***    . *******.*** ***********

25. spacer 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013856 (Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence) position: , mismatch: 8, identity: 0.75 

tgcataccgtgccagcgccagtgcggcgcggc	CRISPR spacer
cacgaacagtgtcagcgccagtgcggcgacgc	Protospacer
..*. ** ***.****************  **

26. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014203 (Clostridium baratii strain CDC51267 plasmid pNPD11_1, complete sequence) position: , mismatch: 8, identity: 0.75 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
ttattttttaaaattgtttttttccaatcata	Protospacer
. *******.** *************.  **

27. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_015254 (Brochothrix phage BL3, complete genome) position: , mismatch: 8, identity: 0.75 

caattttt----tgaatttgtttttttccagaaatt	CRISPR spacer
----cttcaggatgaatttgttttttttgagaaatt	Protospacer
    .**.    ***************. *******

28. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.75 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
caattttttgaattattttttttaaaacaaga	Protospacer
**************  *******  *. **

29. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010112 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-6, complete sequence) position: , mismatch: 8, identity: 0.75 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
ttgttttttgtatttggttttttccattgatt	Protospacer
. .******* ***** *********  .***

30. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 8, identity: 0.75 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
caatttttctaatttgtttttttgtagctcct	Protospacer
********. ************* .**   .*

31. spacer 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038236 (Leisingera sp. NJS201 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
ccggaactgctgatgccgatgatcgggctcga	Protospacer
.* * *..*** ********.**********.

32. spacer 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 8, identity: 0.75 

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
cacgccgagctcatcccgataatcggggtcga	Protospacer
. ***   ****** ************ ***.

33. spacer 3.12|2842369|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 8, identity: 0.75 

ctcacca--gttttggggtcaataaccgggggat	CRISPR spacer
--aagcattgttttggggacaaaaaccgggggtg	Protospacer
   * **  ********* *** *********

34. spacer 2.1|2825619|32|NZ_CP010186|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719 

taagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
ctcatcgcatccatcatcggttccagtgcgcc	Protospacer
.  .* ..***********  ***********

35. spacer 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010647 (Phaeobacter piscinae strain P36 plasmid pP36_d, complete sequence) position: , mismatch: 9, identity: 0.719 

tgcataccgtgccagcgccagtgcggcgcggc	CRISPR spacer
cttgcagcctgccagcgccagggcggcgcagc	Protospacer
. ...* * ************ *******.**

36. spacer 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 9, identity: 0.719 

tgcataccgtgccagcgccagtgcggcgcggc	CRISPR spacer
tacgcctgctgccagcgccagtgctgcgccgc	Protospacer
*.*.. .  *************** **** **

37. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to CP002494 (Enterococcus faecalis 62 plasmid EF62pC, complete sequence) position: , mismatch: 9, identity: 0.719 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
catttttttgaatctgtttttttcttttgttg	Protospacer
** **********.**********.   . *

38. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP036247 (Enterococcus faecalis R712 plasmid pR712_01, complete sequence) position: , mismatch: 9, identity: 0.719 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
catttttttgaatctgtttttttcttttgttg	Protospacer
** **********.**********.   . *

39. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 9, identity: 0.719 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
gcattttttgaggttgtttttttccaatcgta	Protospacer
  *********. *************.  .*

40. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 9, identity: 0.719 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
gcattttttgaggttgtttttttccaatcgta	Protospacer
  *********. *************.  .*

41. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 9, identity: 0.719 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
caattctttgaatttctttttttgccatttta	Protospacer
*****.********* ******* * .   *

42. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027191 (Lactobacillus sp. CBA3605 plasmid pCBA3605-1, complete sequence) position: , mismatch: 9, identity: 0.719 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
taattttttgaatatttttttttcaataggca	Protospacer
.************ * ******** * *...

43. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MK618657 (Klebsiella phage Sanco, complete genome) position: , mismatch: 9, identity: 0.719 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
gttcgatcgccactgcttaaccgggcaatttg	Protospacer
* .  *******.****** ********  *

44. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MK931445 (Klebsiella phage Shelby, complete genome) position: , mismatch: 9, identity: 0.719 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
gttcgatcgccactgcttaaccgggcaatttg	Protospacer
* .  *******.****** ********  *

45. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_048043 (Klebsiella phage NJS2, complete genome) position: , mismatch: 9, identity: 0.719 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
gttcgatcgccactgcttaaccgggcaatttg	Protospacer
* .  *******.****** ********  *

46. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_028774 (Klebsiella phage Sushi, complete genome) position: , mismatch: 9, identity: 0.719 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
gttcgatcgccactgcttaaccgggcaatttg	Protospacer
* .  *******.****** ********  *

47. spacer 2.9|2826107|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 9, identity: 0.719 

tgttgtcggcgggtcgggcagtagtcgcgcgc	CRISPR spacer
ttcggtcggcgggccggtcagtagtcggcggt	Protospacer
* . *********.*** *********   *.

48. spacer 3.1|2841698|32|NZ_CP010186|CRISPRCasFinder,CRT matches to MK249151 (Blackfly microvirus SF02 isolate 049, complete genome) position: , mismatch: 9, identity: 0.719 

ttttgtgccctggcgttttgctggctctcgcg	CRISPR spacer
atttgttccctggcgttttgttgggacatggc	Protospacer
 ***** *************.***  * .*

49. spacer 3.3|2841820|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NC_017140 (Bacillus megaterium WSH-002 plasmid WSH-002_p2, complete sequence) position: , mismatch: 9, identity: 0.719 

cgttcctcgcattatttccctttcttcttcga	CRISPR spacer
ccgcgctcgctttgtttccctttcttctccat	Protospacer
*  . ***** **.**************.*.

50. spacer 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 9, identity: 0.719 

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
tccgtatcgctcatgtcgataatcctaattca	Protospacer
****.**********.********  . *. .

51. spacer 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 9, identity: 0.719 

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
agctcgaagcccatgccgatgatcgggctcgc	Protospacer
  * *.  **.*********.**********

52. spacer 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 9, identity: 0.719 

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
agctcgaagcccatgccgatgatcgggctcgc	Protospacer
  * *.  **.*********.**********

53. spacer 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 10, identity: 0.688 

tgcataccgtgccagcgccagtgcggcgcggc	CRISPR spacer
ctcgctgcgtgccaccgccagttcggcgcgca	Protospacer
. *..  ******* ******* *******

54. spacer 2.4|2825802|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_015724 (Cupriavidus necator N-1 plasmid pBB2, complete sequence) position: , mismatch: 10, identity: 0.688 

tgcataccgtgccagcgccagtgcggcgcggc	CRISPR spacer
ctcgctgcgtgccaccgccagttcggcgcgca	Protospacer
. *..  ******* ******* *******

55. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to HG796351 (Uncultured bacterium plasmid pRGI00631) position: , mismatch: 10, identity: 0.688 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
tgtatttttgaatttgcttttttacagagccg	Protospacer
..  ************.****** ****. .

56. spacer 2.6|2825924|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 10, identity: 0.688 

caattttttgaatttgtttttttccagaaatt	CRISPR spacer
tctttttttgattttatttttttccaactcct	Protospacer
.  ******** ***.**********.   .*

57. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MH633486 (Klebsiella phage NJS3, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

58. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_049845 (Klebsiella phage PhiKpNIH-2, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

59. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_049842 (Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

60. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to LR757892 (Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

61. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MT894005 (Klebsiella phage MMBB, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
attcgatcgccactgcttaaccgggcaatttg	Protospacer
. .  *******.****** ********  *

62. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MG552615 (Klebsiella virus GML-KpCol1, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

63. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to KP658157 (Klebsiella phage 1513, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
attcgatcgccactgcttaaccgggcaatttg	Protospacer
. .  *******.****** ********  *

64. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MH633484 (Klebsiella phage TAH8, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

65. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MK931442 (Klebsiella phage Sin4, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

66. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MH844531 (Klebsiella phage GH-K3, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
attcgatcgccactgcttaaccgggcaatttg	Protospacer
. .  *******.****** ********  *

67. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_048044 (Klebsiella phage NJR15, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

68. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_048143 (Klebsiella phage KpKT21phi1, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
attcgatcgccactgcttaaccgggcaatttg	Protospacer
. .  *******.****** ********  *

69. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_049840 (Klebsiella phage vB_KpnS_FZ10, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
attcgatcgccactgcttaaccgggcaatttg	Protospacer
. .  *******.****** ********  *

70. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_049844 (Klebsiella phage 13, complete genome) position: , mismatch: 10, identity: 0.688 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cctcgatcgccactgcttaaccgggcaatttg	Protospacer
  .  *******.****** ********  *

71. spacer 3.1|2841698|32|NZ_CP010186|CRISPRCasFinder,CRT matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

ttttgtgccctggcgttttgctggctctcgcg	CRISPR spacer
accggtgccctggcgctttgcaggctccttcc	Protospacer
 .. ***********.***** *****.. *

72. spacer 3.2|2841759|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039902 (Agrobacterium tumefaciens strain CFBP5877 plasmid pTiCFBP5877, complete sequence) position: , mismatch: 10, identity: 0.688 

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   ..

73. spacer 3.2|2841759|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039893 (Agrobacterium tumefaciens strain CFBP5499 plasmid pTiCFBP5499, complete sequence) position: , mismatch: 10, identity: 0.688 

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   ..

74. spacer 3.2|2841759|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000025 (Agrobacterium genomosp. 6 strain AR125 plasmid pTi_AR125, complete sequence) position: , mismatch: 10, identity: 0.688 

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   ..

75. spacer 3.2|2841759|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000029 (Agrobacterium genomosp. 6 strain CFBP5499 plasmid pTi_CFBP5499, complete sequence) position: , mismatch: 10, identity: 0.688 

tttgccgctgtcagcattgctggcgcgtaata	CRISPR spacer
ctggccgctgtcgccattgctggcgccatgct	Protospacer
.* *********. ************   ..

76. spacer 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688 

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
tacgcatcgcccatgccgatgatcgccgcaac	Protospacer
* ********.*********.****   . .

77. spacer 3.4|2841881|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 10, identity: 0.688 

tccgcatcgctcatgccgataatcgggctcgg	CRISPR spacer
tacgcatcgcccatgccgatgatcgccgcaac	Protospacer
* ********.*********.****   . .

78. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to KY575286 (UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome) position: , mismatch: 11, identity: 0.656 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaattcg	Protospacer
  .  *******.****** ********  .

79. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to MF415412 (Klebsiella phage KPN N141, complete genome) position: , mismatch: 11, identity: 0.656 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaattcg	Protospacer
  .  *******.****** ********  .

80. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to JN672684 (Enterobacteria phage F20, partial genome) position: , mismatch: 11, identity: 0.656 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaattcg	Protospacer
  .  *******.****** ********  .

81. spacer 2.8|2826046|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NC_049848 (Klebsiella phage KP1801, complete genome) position: , mismatch: 11, identity: 0.656 

gacgtatcgccattgcttatccgggcaaagtc	CRISPR spacer
cttcgatcgccactgcttaaccgggcaattcg	Protospacer
  .  *******.****** ********  .

82. spacer 2.9|2826107|32|NZ_CP010186|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 11, identity: 0.656 

tgttgtcggcgggtcgggcagtagtcgcgcgc	CRISPR spacer
gattgtcggcgagtcgggcagtggtaaaagta	Protospacer
 .*********.**********.** . .

83. spacer 3.10|2842247|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.656 

gctgacctgtcgaatccgtatagccgccgttc	CRISPR spacer
atcaacctgtcgaatccggagagccgcgtcgt	Protospacer
....************** * ******  . .

84. spacer 3.10|2842247|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 11, identity: 0.656 

gctgacctgtcgaatccgtatagccgccgttc	CRISPR spacer
atcaacctgtcgaatccggaaagccgcgtcgt	Protospacer
....************** * ******  . .

85. spacer 3.10|2842247|32|NZ_CP010186|CRISPRCasFinder,CRT,PILER-CR matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 11, identity: 0.656 

gctgacctgtcgaatccgtatagccgccgttc	CRISPR spacer
atcaacctgtcgaatccggaaagccgcatcgt	Protospacer
....************** * ******  . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 82406 : 87719 6 Stx2-converting_phage(50.0%) transposase NA
DBSCAN-SWA_2 839303 : 959501 153 Escherichia_phage(38.32%) lysis,head,holin,coat,capsid,terminase,integrase,protease,tail,portal attL 864050:864072|attR 922224:922246
DBSCAN-SWA_3 1734886 : 1832641 111 Escherichia_phage(43.55%) lysis,head,holin,tRNA,capsid,transposase,terminase,integrase,protease,tail,portal attL 1798218:1798233|attR 1830872:1830887
DBSCAN-SWA_4 2158735 : 2167044 9 Enterobacteria_phage(83.33%) NA NA
DBSCAN-SWA_5 2373789 : 2418730 55 Enterobacteria_phage(86.36%) head,holin,tRNA,capsid,terminase,integrase,tail,portal,plate attL 2369951:2369974|attR 2415279:2415302
DBSCAN-SWA_6 2802156 : 2809296 6 Escherichia_phage(83.33%) NA NA
DBSCAN-SWA_7 3991293 : 4006651 8 Stx2-converting_phage(42.86%) transposase,tRNA NA
DBSCAN-SWA_8 4601766 : 4660139 60 Pectobacterium_phage(11.11%) transposase,protease NA
DBSCAN-SWA_9 4703524 : 4714005 12 Enterobacteria_phage(80.0%) integrase attL 4695134:4695148|attR 4724119:4724133

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage