Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010220 Escherichia coli strain M18 plasmid A, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP010219 Escherichia coli strain M18 chromosome, complete genome 4 crisprs cas3,c2c9_V-U4,DEDDh,DinG,RT,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,PrimPol,WYL,cas14j 0 23 9 0

Results visualization

1. NZ_CP010219
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010219_1 1672520-1673037 TypeI-E I-E
8 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010219_2 1698736-1699984 Unclear I-E
20 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010219_3 4449253-4449392 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010219_4 4569040-4569188 Orphan I-F
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP010219_1 1.3|1672671|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672671-1672702 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246449-246480 2 0.938
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP053858 Rhizobium pusense strain 76 plasmid pR76, complete sequence 455664-455695 5 0.844
NZ_CP010219_2 2.5|1699009|32|NZ_CP010219|CRISPRCasFinder,CRT 1699009-1699040 32 NZ_CP017563 Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence 632328-632359 5 0.844
NZ_CP010219_2 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT 1699131-1699162 32 NZ_CP010860 Marinovum algicola DG 898 plasmid pMaD5, complete sequence 101414-101445 7 0.781
NZ_CP010219_2 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT 1699253-1699284 32 NZ_CP032695 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence 1028485-1028516 7 0.781
NZ_CP010219_2 2.10|1699314|32|NZ_CP010219|CRISPRCasFinder,CRT 1699314-1699345 32 MH807820 Dickeya phage Coodle, complete genome 4693-4724 7 0.781
NZ_CP010219_2 2.10|1699314|32|NZ_CP010219|CRISPRCasFinder,CRT 1699314-1699345 32 MT857002 Salmonella phage pSal-SNUABM-02, complete genome 39215-39246 7 0.781
NZ_CP010219_2 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT 1699741-1699772 32 NZ_CP032323 Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence 468691-468722 7 0.781
NZ_CP010219_2 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT 1699741-1699772 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 428674-428705 7 0.781
NZ_CP010219_2 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT 1699741-1699772 32 NZ_CP007795 Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence 628096-628127 7 0.781
NZ_CP010219_2 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT 1699741-1699772 32 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 768678-768709 7 0.781
NZ_CP010219_1 1.1|1672549|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672549-1672580 32 HM029250 Lactococcus phage 949, complete genome 55071-55102 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NC_003037 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence 270741-270772 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NC_017327 Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence 1429126-1429157 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP021798 Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence 450512-450543 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NC_017324 Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence 1363718-1363749 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP009145 Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence 259589-259620 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP021801 Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence 156145-156176 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP021819 Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence 108131-108162 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP021824 Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence 136871-136902 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP021813 Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence 308731-308762 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NC_018683 Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence 386165-386196 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP021794 Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence 1141409-1141440 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP021809 Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence 239251-239282 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP021217 Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence 1491172-1491203 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP026526 Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence 173783-173814 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP019483 Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence 251909-251940 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NZ_CP019486 Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence 227862-227893 8 0.75
NZ_CP010219_1 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672854-1672885 32 NC_020527 Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence 270403-270434 8 0.75
NZ_CP010219_2 2.1|1698765|32|NZ_CP010219|CRISPRCasFinder,CRT 1698765-1698796 32 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 1326-1357 8 0.75
NZ_CP010219_2 2.2|1698826|32|NZ_CP010219|CRISPRCasFinder,CRT 1698826-1698857 32 MK814759 Gordonia phage Reyja, complete genome 4467-4498 8 0.75
NZ_CP010219_2 2.5|1699009|32|NZ_CP010219|CRISPRCasFinder,CRT 1699009-1699040 32 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 460575-460606 8 0.75
NZ_CP010219_2 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT 1699131-1699162 32 NZ_CP010410 Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence 347166-347197 8 0.75
NZ_CP010219_2 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT 1699253-1699284 32 KX752698 Mycobacterium phage Tonenili, complete genome 136893-136924 8 0.75
NZ_CP010219_2 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT 1699741-1699772 32 NC_010811 Ralstonia phage RSL1, complete genome 67286-67317 8 0.75
NZ_CP010219_2 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT 1699741-1699772 32 AB366653 Ralstonia phage RSL1 DNA, complete genome 67286-67317 8 0.75
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 MT857002 Salmonella phage pSal-SNUABM-02, complete genome 39215-39248 8 0.765
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 MH807820 Dickeya phage Coodle, complete genome 4691-4724 8 0.765
NZ_CP010219_1 1.5|1672793|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672793-1672824 32 MT708550 Achromobacter phage Mano, complete genome 2686-2717 9 0.719
NZ_CP010219_2 2.4|1698948|32|NZ_CP010219|CRISPRCasFinder,CRT 1698948-1698979 32 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 224876-224907 9 0.719
NZ_CP010219_2 2.5|1699009|32|NZ_CP010219|CRISPRCasFinder,CRT 1699009-1699040 32 NZ_CP006988 Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence 91348-91379 9 0.719
NZ_CP010219_2 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT 1699131-1699162 32 NZ_CP029777 Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence 89227-89258 9 0.719
NZ_CP010219_2 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT 1699131-1699162 32 NZ_CP021083 Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence 361520-361551 9 0.719
NZ_CP010219_2 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT 1699253-1699284 32 NZ_CP039905 Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence 175988-176019 9 0.719
NZ_CP010219_2 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT 1699253-1699284 32 NZ_CP039909 Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence 115836-115867 9 0.719
NZ_CP010219_2 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT 1699253-1699284 32 NZ_LS974446 Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence 14981-15012 9 0.719
NZ_CP010219_2 2.13|1699497|32|NZ_CP010219|CRISPRCasFinder,CRT 1699497-1699528 32 AP014303 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S29-C153, *** SEQUENCING IN PROGRESS *** 4922-4953 9 0.719
NZ_CP010219_2 2.19|1699863|32|NZ_CP010219|CRISPRCasFinder,CRT 1699863-1699894 32 MH719082 Escherichia phage vB_EcoM_IME392, complete genome 494-525 9 0.719
NZ_CP010219_2 2.24|1699007|34|NZ_CP010219|PILER-CR 1699007-1699040 34 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 460575-460608 9 0.735
NZ_CP010219_2 2.26|1699129|34|NZ_CP010219|PILER-CR 1699129-1699162 34 NZ_CP010860 Marinovum algicola DG 898 plasmid pMaD5, complete sequence 101414-101447 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 NZ_CP012594 Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence 4619-4652 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 NZ_CP042347 Staphylococcus aureus strain BSN9S plasmid pSaBSN9, complete sequence 22354-22387 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 NZ_AP018563 Staphylococcus argenteus strain 58113 plasmid p1, complete sequence 22950-22983 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 CP030569 Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence 17479-17512 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 CP030458 Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence 20191-20224 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 NZ_AP017923 Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence 22374-22407 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 NC_013325 Staphylococcus aureus plasmid pWBG745, complete sequence 17627-17660 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 CP030710 Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence 12086-12119 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 NZ_CP047857 Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence 31421-31454 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 NZ_MH587574 Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence 22381-22414 9 0.735
NZ_CP010219_2 2.29|1699312|34|NZ_CP010219|PILER-CR 1699312-1699345 34 CP030603 Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence 2030-2063 9 0.735
NZ_CP010219_2 2.1|1698765|32|NZ_CP010219|CRISPRCasFinder,CRT 1698765-1698796 32 NZ_CP012383 Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence 14130-14161 10 0.688
NZ_CP010219_2 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT 1699131-1699162 32 NZ_CP019037 Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence 354311-354342 10 0.688
NZ_CP010219_2 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT 1699375-1699406 32 MT856905 Enterococcus phage vB_EfaM_A2, complete genome 20447-20478 10 0.688
NZ_CP010219_2 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT 1699375-1699406 32 MW004544 Enterococcus phage EFGrKN, complete genome 18980-19011 10 0.688
NZ_CP010219_2 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT 1699375-1699406 32 MN241318 Enterococcus phage PEf771, complete genome 101150-101181 10 0.688
NZ_CP010219_2 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT 1699375-1699406 32 NC_029009 Enterococcus phage EFDG1, complete genome 19024-19055 10 0.688
NZ_CP010219_2 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT 1699375-1699406 32 MH880817 Enterococcus phage EfV12-phi1, complete genome 21449-21480 10 0.688
NZ_CP010219_2 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT 1699375-1699406 32 MN027503 Enterococcus phage vB_OCPT_Ben, complete genome 131391-131422 10 0.688
NZ_CP010219_2 2.13|1699497|32|NZ_CP010219|CRISPRCasFinder,CRT 1699497-1699528 32 MK250016 Prevotella phage Lak-A1, complete genome 348544-348575 10 0.688
NZ_CP010219_2 2.24|1699007|34|NZ_CP010219|PILER-CR 1699007-1699040 34 NZ_CP006988 Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence 91346-91379 10 0.706
NZ_CP010219_2 2.36|1699739|34|NZ_CP010219|PILER-CR 1699739-1699772 34 NC_010811 Ralstonia phage RSL1, complete genome 67284-67317 10 0.706
NZ_CP010219_2 2.36|1699739|34|NZ_CP010219|PILER-CR 1699739-1699772 34 AB366653 Ralstonia phage RSL1 DNA, complete genome 67284-67317 10 0.706
NZ_CP010219_1 1.1|1672549|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672549-1672580 32 NC_009760 Bacillus phage 0305phi8-36, complete genome 157057-157088 11 0.656
NZ_CP010219_1 1.4|1672732|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672732-1672763 32 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1789771-1789802 11 0.656
NZ_CP010219_1 1.4|1672732|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT 1672732-1672763 32 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 23490-23521 11 0.656
NZ_CP010219_2 2.13|1699497|32|NZ_CP010219|CRISPRCasFinder,CRT 1699497-1699528 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1997929-1997960 11 0.656
NZ_CP010219_2 2.23|1698946|34|NZ_CP010219|PILER-CR 1698946-1698979 34 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 224874-224907 11 0.676
NZ_CP010219_2 2.28|1699251|34|NZ_CP010219|PILER-CR 1699251-1699284 34 NZ_CP039905 Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence 175986-176019 11 0.676
NZ_CP010219_2 2.28|1699251|34|NZ_CP010219|PILER-CR 1699251-1699284 34 NZ_CP039909 Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence 115834-115867 11 0.676
NZ_CP010219_2 2.28|1699251|34|NZ_CP010219|PILER-CR 1699251-1699284 34 NZ_LS974446 Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence 14979-15012 11 0.676
NZ_CP010219_2 2.32|1699495|34|NZ_CP010219|PILER-CR 1699495-1699528 34 MK250016 Prevotella phage Lak-A1, complete genome 348544-348577 11 0.676

1. spacer 1.3|1672671|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 2, identity: 0.938

cttaccacccagacactgatactccacataaa	CRISPR spacer
ctttccacccaggcactgatactccacataaa	Protospacer
*** ********.*******************

2. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053858 (Rhizobium pusense strain 76 plasmid pR76, complete sequence) position: , mismatch: 5, identity: 0.844

atgtcgagcgcgttgacagctatatt-cgccgt	CRISPR spacer
ttgacgagcgcgtcgacagctatattgcgcca-	Protospacer
 ** *********.************ ****. 

3. spacer 2.5|1699009|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 5, identity: 0.844

gcccgcct-cgtcggtgtattccgcgagatcgc	CRISPR spacer
-ccggcctacgtcgacgtattccgcgagatcgt	Protospacer
 ** **** *****..****************.

4. spacer 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 7, identity: 0.781

atcaacatgcagcgcgaacggctg---cccctcgc	CRISPR spacer
atccacatgcagctcgaacggctgaaatcgct---	Protospacer
*** ********* **********   .* **   

5. spacer 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 7, identity: 0.781

ataaac-tttccgccgatctcaagagcggcacg	CRISPR spacer
-caaacgacaccgccgatctcaagaacgccacg	Protospacer
 .****  . ***************.** ****

6. spacer 2.10|1699314|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MH807820 (Dickeya phage Coodle, complete genome) position: , mismatch: 7, identity: 0.781

ctcaaaaaacttgaaatcaaaaccgttgaaga---	CRISPR spacer
gtcaagaaagttgaaatcaaaacc---gaagcccc	Protospacer
 ****.*** **************   ****    

7. spacer 2.10|1699314|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MT857002 (Salmonella phage pSal-SNUABM-02, complete genome) position: , mismatch: 7, identity: 0.781

ctcaaaaaacttgaaatcaaaaccgttgaaga---	CRISPR spacer
gtcaagaaagttgaaatcaaaacc---gaagcccc	Protospacer
 ****.*** **************   ****    

8. spacer 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cggatcatggtggaaaccaactggcccggcgc	Protospacer
* *.***************** * *****.. 

9. spacer 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cggatcatggtggaaaccaactggcccggcgc	Protospacer
* *.***************** * *****.. 

10. spacer 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 7, identity: 0.781

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cggatcatggtggaaaccaactggcccggcgc	Protospacer
* *.***************** * *****.. 

11. spacer 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cggatcatggtggaaaccaactggcccggcgc	Protospacer
* *.***************** * *****.. 

12. spacer 1.1|1672549|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to HM029250 (Lactococcus phage 949, complete genome) position: , mismatch: 8, identity: 0.75

cagat---tatcttctttttcaatccagccaccga	CRISPR spacer
---atctatctcttctttttctgtccagccaccat	Protospacer
   **   * *********** .**********. 

13. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

14. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

15. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

16. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

17. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

18. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

19. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

20. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

21. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

22. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

23. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

24. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

25. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

26. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

27. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

28. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

29. spacer 1.6|1672854|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

atgtcgagcgcgttgacagctatattcgccgt	CRISPR spacer
ggtttgagcgcattaacagctatattcggcat	Protospacer
.  *.******.**.************* *.*

30. spacer 2.1|1698765|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aacatcggaaacggcttcgcagcggcggcgtc	CRISPR spacer
agtggcggaaacggcttcgcagcgtcagcgcg	Protospacer
*... ******************* *.***. 

31. spacer 2.2|1698826|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

-gacagaacggcctcagtagtctcgtcaggctc	CRISPR spacer
ccaccg-ctggccccagtagcctcgtcaggctt	Protospacer
  ** *  .****.******.***********.

32. spacer 2.5|1699009|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcccgcctcgtcggtgtattccgcgagatcgc	CRISPR spacer
cgtcgcctcgtcggcgtattccgccagcaggc	Protospacer
  .***********.********* **   **

33. spacer 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atcaaca--tgcagcgcgaacggctgcccctcgc	CRISPR spacer
--cagcgcctgcagcgcgaacggctgcgactcca	Protospacer
  **.*.  ******************  ***  

34. spacer 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT matches to KX752698 (Mycobacterium phage Tonenili, complete genome) position: , mismatch: 8, identity: 0.75

ataaactttccgccgatctcaagagcggcacg	CRISPR spacer
acctgctttccgccaagctcaagagcggtgcg	Protospacer
*.  .*********.* ***********..**

35. spacer 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NC_010811 (Ralstonia phage RSL1, complete genome) position: , mismatch: 8, identity: 0.75

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
tggaatctggtggaaaccaacggtccgggtac	Protospacer
. *. . ******************* **** 

36. spacer 2.17|1699741|32|NZ_CP010219|CRISPRCasFinder,CRT matches to AB366653 (Ralstonia phage RSL1 DNA, complete genome) position: , mismatch: 8, identity: 0.75

ctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
tggaatctggtggaaaccaacggtccgggtac	Protospacer
. *. . ******************* **** 

37. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to MT857002 (Salmonella phage pSal-SNUABM-02, complete genome) position: , mismatch: 8, identity: 0.765

acctcaaaaaacttgaaatcaaaaccgttgaaga---	CRISPR spacer
aagtcaagaaagttgaaatcaaaacc---gaagcccc	Protospacer
*  ****.*** **************   ****    

38. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to MH807820 (Dickeya phage Coodle, complete genome) position: , mismatch: 8, identity: 0.765

acctcaaaaaacttgaaatcaaaaccgttgaaga---	CRISPR spacer
aagtcaagaaagttgaaatcaaaacc---gaagcccc	Protospacer
*  ****.*** **************   ****    

39. spacer 1.5|1672793|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to MT708550 (Achromobacter phage Mano, complete genome) position: , mismatch: 9, identity: 0.719

gcaaattaccgccgggctaacgtttgatctca	CRISPR spacer
tagcattaccgccgggcttacctttgaccgcc	Protospacer
  . ************** ** *****.* * 

40. spacer 2.4|1698948|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcatagccaggctgatccggcgacggcctta	CRISPR spacer
gcagcagaccggctgatccggcgacggccccg	Protospacer
*  ..** * *******************...

41. spacer 2.5|1699009|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 9, identity: 0.719

gcccgcctcgtcggtgtattccgcgagatcgc	CRISPR spacer
taccgcctcgtcgatgtaatccgcgacgtgcg	Protospacer
  ***********.**** ******* .*   

42. spacer 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

atcaacatgcagcgcgaacggctgcccctcgc	CRISPR spacer
caggagttccagcgcgaacggcagcgcctcgc	Protospacer
   .*  * ************* ** ******

43. spacer 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 9, identity: 0.719

atcaacatgcagcgcgaacggctgcccctcgc	CRISPR spacer
gccttcgagcagcgccagcggctgcccctcga	Protospacer
..*  *. ******* *.************* 

44. spacer 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 9, identity: 0.719

ataaactttccgccgatctcaagagcggcacg	CRISPR spacer
gcggcctttccaccgatctcaagcgcggcgcc	Protospacer
.... ******.*********** *****.* 

45. spacer 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP039909 (Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence) position: , mismatch: 9, identity: 0.719

ataaactttccgccgatctcaagagcggcacg	CRISPR spacer
gcggcctttccaccgatctcaagcgcggcgcc	Protospacer
.... ******.*********** *****.* 

46. spacer 2.9|1699253|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_LS974446 (Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

ataaactttccgccgatctcaagagcggcacg	CRISPR spacer
gcggcctttccaccgatctcaagcgcggcgcc	Protospacer
.... ******.*********** *****.* 

47. spacer 2.13|1699497|32|NZ_CP010219|CRISPRCasFinder,CRT matches to AP014303 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S29-C153, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

atatcagcgttatcaaccgcgatttccgtctc	CRISPR spacer
gcagcagctttatcaaccgcgacttcctcgcc	Protospacer
..* **** *************.**** . .*

48. spacer 2.19|1699863|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MH719082 (Escherichia phage vB_EcoM_IME392, complete genome) position: , mismatch: 9, identity: 0.719

cccattaagattttgcagggtaagtgtgatct	CRISPR spacer
tcagttaagactttgctgggtaagtgtaacga	Protospacer
.* .******.***** **********.*.  

49. spacer 2.24|1699007|34|NZ_CP010219|PILER-CR matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acgcccgcctcgtcggtgtattccgcgagatcgc	CRISPR spacer
agcgtcgcctcgtcggcgtattccgccagcaggc	Protospacer
*   .***********.********* **   **

50. spacer 2.26|1699129|34|NZ_CP010219|PILER-CR matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 9, identity: 0.735

acatcaacatgcagcgcgaacggctg---cccctcgc	CRISPR spacer
cgatccacatgcagctcgaacggctgaaatcgct---	Protospacer
  *** ********* **********   .* **   

51. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to NZ_CP012594 (Staphylococcus aureus strain HOU1444-VR plasmid pVR-MSSA_01, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

52. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to NZ_CP042347 (Staphylococcus aureus strain BSN9S plasmid pSaBSN9, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

53. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to NZ_AP018563 (Staphylococcus argenteus strain 58113 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

54. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to CP030569 (Staphylococcus aureus strain ER01892.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

55. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to CP030458 (Staphylococcus aureus strain ER04013.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

56. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to NZ_AP017923 (Staphylococcus aureus strain JP02758 plasmid pJP080, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

57. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to NC_013325 (Staphylococcus aureus plasmid pWBG745, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

58. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to CP030710 (Staphylococcus aureus strain ER01174.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

59. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to NZ_CP047857 (Staphylococcus aureus strain UP_1435 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

60. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to NZ_MH587574 (Staphylococcus aureus strain WBG10514 plasmid pWBG731, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

61. spacer 2.29|1699312|34|NZ_CP010219|PILER-CR matches to CP030603 (Staphylococcus aureus strain ER00484.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

acctcaaaaaacttgaaatcaaaaccgttgaaga--	CRISPR spacer
acctcaaaaaaattgaaattaaaa--aacaaagctg	Protospacer
*********** *******.****  . ..***   

62. spacer 2.1|1698765|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688

aacatcggaaacggcttcgcagcggcggcgtc	CRISPR spacer
gaggacggaagcggcttcgccgcggcgggcaa	Protospacer
.* . *****.********* *******    

63. spacer 2.7|1699131|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP019037 (Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

atcaacatgcagcgcgaacggctgcccctcgc	CRISPR spacer
ggtttcattcatcgcgaacggctgccccggga	Protospacer
. .  *** ** ****************  * 

64. spacer 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MT856905 (Enterococcus phage vB_EfaM_A2, complete genome) position: , mismatch: 10, identity: 0.688

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****     

65. spacer 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MW004544 (Enterococcus phage EFGrKN, complete genome) position: , mismatch: 10, identity: 0.688

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****     

66. spacer 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MN241318 (Enterococcus phage PEf771, complete genome) position: , mismatch: 10, identity: 0.688

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****     

67. spacer 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NC_029009 (Enterococcus phage EFDG1, complete genome) position: , mismatch: 10, identity: 0.688

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgaa	Protospacer
*. .******** ******** *****     

68. spacer 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MH880817 (Enterococcus phage EfV12-phi1, complete genome) position: , mismatch: 10, identity: 0.688

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****     

69. spacer 2.11|1699375|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MN027503 (Enterococcus phage vB_OCPT_Ben, complete genome) position: , mismatch: 10, identity: 0.688

ttatttgacctcgttgataatcccacagatcc	CRISPR spacer
tctcttgacctccttgataataccacactgag	Protospacer
*. .******** ******** *****     

70. spacer 2.13|1699497|32|NZ_CP010219|CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 10, identity: 0.688

atatcagcgttatcaaccgcgatttccgtctc	CRISPR spacer
atatcatctttatcaaccgcgataagaaagta	Protospacer
****** * **************    .  * 

71. spacer 2.24|1699007|34|NZ_CP010219|PILER-CR matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 10, identity: 0.706

acgcccgcctcgtcggtgtattccgcgagatcgc	CRISPR spacer
agtaccgcctcgtcgatgtaatccgcgacgtgcg	Protospacer
*   ***********.**** ******* .*   

72. spacer 2.36|1699739|34|NZ_CP010219|PILER-CR matches to NC_010811 (Ralstonia phage RSL1, complete genome) position: , mismatch: 10, identity: 0.706

acctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cttggaatctggtggaaaccaacggtccgggtac	Protospacer
 .. *. . ******************* **** 

73. spacer 2.36|1699739|34|NZ_CP010219|PILER-CR matches to AB366653 (Ralstonia phage RSL1 DNA, complete genome) position: , mismatch: 10, identity: 0.706

acctggtcatggtggaaaccaacggtcccggtag	CRISPR spacer
cttggaatctggtggaaaccaacggtccgggtac	Protospacer
 .. *. . ******************* **** 

74. spacer 1.1|1672549|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NC_009760 (Bacillus phage 0305phi8-36, complete genome) position: , mismatch: 11, identity: 0.656

cagattatcttctttttcaatccagccaccga	CRISPR spacer
ttgattatcttcttcttcaatcgagatgagcg	Protospacer
. ************.******* ** ..   .

75. spacer 1.4|1672732|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 11, identity: 0.656

tcacgcggagtgagacggcgtacgagcattgc	CRISPR spacer
aggagcggagtgtgaaggcgtacgagcccact	Protospacer
  . ******** ** *********** .  .

76. spacer 1.4|1672732|32|NZ_CP010219|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 11, identity: 0.656

tcacgcggagtgagacggcgtacgagcattgc	CRISPR spacer
aggagcggagtgtgaaggcgtacgagcccact	Protospacer
  . ******** ** *********** .  .

77. spacer 2.13|1699497|32|NZ_CP010219|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

atatcagcgttatcaaccgcgatttccgtctc	CRISPR spacer
gcgcttccgttatcatccgcgagttccgtcaa	Protospacer
.....  ******** ****** *******  

78. spacer 2.23|1698946|34|NZ_CP010219|PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

tcggcatagccaggctgatccggcgacggcctta	CRISPR spacer
gagcagcagaccggctgatccggcgacggccccg	Protospacer
  *  ..** * *******************...

79. spacer 2.28|1699251|34|NZ_CP010219|PILER-CR matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 11, identity: 0.676

acataaactttccgccgatctcaagagcggcacg	CRISPR spacer
ttgcggcctttccaccgatctcaagcgcggcgcc	Protospacer
 ..... ******.*********** *****.* 

80. spacer 2.28|1699251|34|NZ_CP010219|PILER-CR matches to NZ_CP039909 (Agrobacterium tumefaciens strain CFBP6624 plasmid pAtCFBP6624, complete sequence) position: , mismatch: 11, identity: 0.676

acataaactttccgccgatctcaagagcggcacg	CRISPR spacer
ttgcggcctttccaccgatctcaagcgcggcgcc	Protospacer
 ..... ******.*********** *****.* 

81. spacer 2.28|1699251|34|NZ_CP010219|PILER-CR matches to NZ_LS974446 (Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

acataaactttccgccgatctcaagagcggcacg	CRISPR spacer
ttgcggcctttccaccgatctcaagcgcggcgcc	Protospacer
 ..... ******.*********** *****.* 

82. spacer 2.32|1699495|34|NZ_CP010219|PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 11, identity: 0.676

acatatcagcgttatcaaccgcgatttccgtctc	CRISPR spacer
tcatatcatctttatcaaccgcgataagaaagta	Protospacer
 ******* * **************    .  * 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 172635 : 231724 65 Escherichia_phage(44.44%) integrase,tRNA,terminase,lysis,tail,transposase attL 167019:167035|attR 207264:207280
DBSCAN-SWA_2 854227 : 895037 59 Enterobacteria_phage(42.37%) integrase,holin,terminase,lysis,portal,capsid attL 861813:861827|attR 900296:900310
DBSCAN-SWA_3 923585 : 931234 7 Enterobacteria_phage(42.86%) NA NA
DBSCAN-SWA_4 974270 : 984969 12 Enterobacteria_phage(72.73%) lysis,integrase,tail attL 965015:965029|attR 989128:989142
DBSCAN-SWA_5 1040070 : 1048379 9 Enterobacteria_phage(83.33%) NA NA
DBSCAN-SWA_6 3368064 : 3441601 83 Shigella_phage(54.76%) tRNA,head,protease,plate,tail,capsid,transposase NA
DBSCAN-SWA_7 3733042 : 3789905 44 uncultured_Mediterranean_phage(14.29%) integrase,tRNA,protease,plate attL 3736705:3736720|attR 3787925:3787940
DBSCAN-SWA_8 4816797 : 4875758 68 Escherichia_phage(38.0%) integrase,tRNA,holin,terminase,head,portal,capsid,tail attL 4808547:4808564|attR 4860669:4860686
DBSCAN-SWA_9 4903126 : 4953497 46 Enterobacteria_phage(25.0%) integrase,protease,plate,transposase attL 4925600:4925616|attR 4966159:4966175
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage