CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP010232	Escherichia coli strain S30 plasmid A, complete sequence	0 crisprs	DEDDh	0	2
NZ_CP010234	Escherichia coli strain S30 plasmid C, complete sequence	0 crisprs	NA	0	1
NZ_CP010233	Escherichia coli strain S30 plasmid B, complete sequence	0 crisprs	csa3,DEDDh	0	1
NZ_CP010231	Escherichia coli strain S30 chromosome, complete genome	6 crisprs	cas3,c2c9_V-U4,DEDDh,DinG,WYL,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,RT	12	6

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5258 : 25667

Escherichia_phage(62.5%)

protease,integrase,transposase

attL 5207:5266|attR 11420:12240

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5207:5266	attL	NA	NA	NA	NA
WP_001067858.1\|5258_5963_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000454193.1\|6421_6772_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845039.1\|6974_7988_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001083725.1\|8132_8630_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_001336345.1\|8741_9032_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001206356.1\|9037_9829_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|9992_10340_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001067858.1\|10722_11427_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001389365.1\|11555_12320_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
11420:12240	attR	NA	NA	NA	NA
WP_001137892.1\|12812_13397_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000004159.1\|13396_14635_-	MFS transporter	NA	NA	NA	NA
WP_000219391.1\|14631_15537_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_001067855.1\|15658_16363_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000248278.1\|17155_17383_-	hypothetical protein	NA	NA	NA	NA
WP_000951934.1\|17406_17598_+	hypothetical protein	NA	NA	NA	NA
WP_000587837.1\|18079_18622_-	AAA family ATPase	NA	NA	NA	NA
WP_000557454.1\|18634_19495_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
WP_001067858.1\|20591_21296_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000027057.1\|21597_22458_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001262765.1\|22734_24045_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_001398199.1\|24329_24731_-	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_000557619.1\|24663_24921_-	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_000616807.1\|25013_25667_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

76129 : 132194

Macacine_betaherpesvirus(21.43%)

protease,integrase,transposase,bacteriocin

attL 83191:83205|attR 98325:98339

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000082154.1\|76129_77101_+\|transposase	IS110-like element ISEc32 family transposase	Q75QL1	Wolbachia_phage	1.1e-25	32.1
WP_000817028.1\|79455_80427_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	8.8e-169	96.6
WP_001238646.1\|80426_81593_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.6e-228	99.7
WP_000715078.1\|82747_84250_-	hypothetical protein	NA	NA	NA	NA
83191:83205	attL	NA	NA	NA	NA
WP_000238252.1\|84858_85308_-	hypothetical protein	A0A222YWI5	Escherichia_phage	5.0e-42	67.1
WP_000190053.1\|85425_85905_+	hypothetical protein	NA	NA	NA	NA
WP_000968140.1\|87188_88046_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_000992806.1\|88042_88900_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_000983710.1\|88896_89724_-	iron/manganese ABC transporter ATP-binding protein SitB	A0A1M7XV31	Cedratvirus	3.6e-14	27.0
WP_000949004.1\|89723_90638_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_085947772.1\|93125_94338_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
WP_000361611.1\|94883_95861_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	4.6e-101	63.9
WP_001066942.1\|96145_96886_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	2.0e-24	57.6
WP_038427931.1\|97006_97132_-	hypothetical protein	NA	NA	NA	NA
WP_000175738.1\|97569_98478_-	antimicrobial resistance protein Mig-14	NA	NA	NA	NA
98325:98339	attR	NA	NA	NA	NA
WP_000771475.1\|98540_99650_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_000280980.1\|100082_101036_-\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_001312823.1\|102308_102467_-\|transposase	transposase	NA	NA	NA	NA
WP_085949156.1\|102650_103863_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	6.0e-167	98.6
WP_000928804.1\|105317_106505_+	efflux RND transporter periplasmic adaptor subunit	A0A140XAI1	Dickeya_phage	1.0e-09	55.7
WP_000733250.1\|106501_108442_+	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	1.8e-35	39.0
WP_001312828.1\|108445_109816_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_000974762.1\|110612_111554_-	hypothetical protein	NA	NA	NA	NA
WP_000450494.1\|113813_115007_-	hypothetical protein	NA	NA	NA	NA
WP_000738422.1\|118092_118386_+	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	5.9e-44	90.7
WP_001318220.1\|121535_122651_+	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	NA	NA
WP_001312839.1\|122664_126450_+	salmochelin/enterobactin export ABC transporter IroC	W8CYL7	Bacillus_phage	1.3e-45	30.0
WP_000933675.1\|126553_127783_+	catecholate siderophore esterase IroD	NA	NA	NA	NA
WP_064055648.1\|127867_128824_+	catecholate siderophore esterase IroE	NA	NA	NA	NA
WP_001222186.1\|128868_131046_-	siderophore salmochelin receptor IroN	A0A0P0I887	Acinetobacter_phage	9.6e-06	31.8
WP_001259759.1\|131990_132194_-\|bacteriocin	colicin V family bacteriocin	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP010234

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

817 : 99387

Escherichia_phage(55.88%)

integrase,protease,transposase,plate

attL 24035:24094|attR 98103:99433

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000124023.1\|817_3805_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.7e-295	53.5
WP_038989442.1\|4316_4628_-	hypothetical protein	Q5XLQ4	Enterobacteria_phage	2.8e-44	93.2
WP_038989443.1\|4678_5710_-\|integrase	tyrosine-type recombinase/integrase	A0A077SLE7	Escherichia_phage	8.4e-194	99.4
WP_000542385.1\|5717_5939_-	hypothetical protein	Q38403	Escherichia_phage	2.6e-36	100.0
WP_073546712.1\|7208_7418_+	c1 repressor inactivator	A0A077SK26	Escherichia_phage	4.1e-31	98.6
WP_073546713.1\|7528_8380_+	hypothetical protein	A0A077SLM8	Escherichia_phage	6.1e-158	99.6
WP_038997082.1\|10715_10895_-	hypothetical protein	Q71TH5	Escherichia_phage	6.0e-23	98.3
WP_073546715.1\|10899_11280_-	type II toxin-antitoxin system death-on-curing family toxin	A0A077SK56	Escherichia_phage	1.3e-62	99.2
WP_001190712.1\|11279_11501_-	type II toxin-antitoxin system Phd/YefM family antitoxin	A0A222YXU1	Escherichia_phage	6.7e-32	100.0
WP_073546716.1\|14911_18028_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	1.3e-27	24.0
WP_001468756.1\|18294_18801_-	hypothetical protein	A0A077SK53	Escherichia_phage	6.5e-91	97.6
WP_000107690.1\|18873_20136_-	hypothetical protein	A0A1B0V7L1	Salmonella_phage	1.6e-234	99.8
WP_000578338.1\|21667_22402_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000896262.1\|23536_23737_-	DUF839 domain-containing protein	NA	NA	NA	NA
24035:24094	attL	NA	NA	NA	NA
WP_114142437.1\|24045_25319_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	6.8e-169	95.0
WP_073546722.1\|25442_28940_-	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	2.7e-98	34.8
WP_114142435.1\|28987_30261_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	5.0e-172	96.3
WP_000169527.1\|31533_31833_+\|transposase	transposase	NA	NA	NA	NA
WP_000878218.1\|31829_32696_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	2.3e-51	40.6
WP_072660832.1\|34506_35037_-	hypothetical protein	NA	NA	NA	NA
WP_072660833.1\|36049_36535_+	plasmid transfer protein	NA	NA	NA	NA
WP_000133023.1\|36531_37254_+	hypothetical protein	NA	NA	NA	NA
WP_063082219.1\|40818_42177_-	esterase-like activity of phytase family protein	NA	NA	NA	NA
WP_000937735.1\|42555_42747_+	hypothetical protein	A0A0N7BTS3	Escherichia_phage	2.4e-06	96.2
WP_001352013.1\|43726_44191_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000794337.1\|44366_45239_+	hypothetical protein	NA	NA	NA	NA
WP_001352007.1\|48110_48266_+	type I toxin-antitoxin system toxin HokD	A0A1I9LJU7	Stx_converting_phage	4.0e-15	90.2
WP_001300563.1\|48459_49572_-\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA
WP_073546725.1\|49731_50241_-\|plate	baseplate protein	Q1MVJ9	Enterobacteria_phage	1.1e-90	98.2
WP_000035250.1\|50252_50834_-	hypothetical protein	Q71TM4	Escherichia_phage	1.8e-100	96.9
WP_000041769.1\|50869_51685_-	hypothetical protein	A0A1B0V835	Salmonella_phage	5.4e-111	98.5
WP_073546726.1\|51694_53284_-	hypothetical protein	A0A1B0V7E4	Salmonella_phage	6.4e-302	97.9
WP_073546727.1\|53343_55050_-	hypothetical protein	Q71TM1	Escherichia_phage	0.0e+00	99.6
WP_000038866.1\|55275_56277_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.7e-178	100.0
WP_001285362.1\|56293_57490_-	ParA family protein	A0A077SL49	Escherichia_phage	1.6e-225	100.0
WP_001154687.1\|57658_58468_-	GIY-YIG nuclease family protein	A0A077SK46	Escherichia_phage	7.1e-156	97.8
WP_001113742.1\|58760_59645_-	RepB family plasmid replication initiator protein	A0A077SLP3	Escherichia_phage	2.1e-161	100.0
WP_001281115.1\|59980_60373_-	hypothetical protein	A0A077SLJ1	Escherichia_phage	7.6e-71	97.7
WP_000336812.1\|60382_60523_-	hypothetical protein	Q71TL6	Escherichia_phage	6.3e-20	100.0
WP_000948429.1\|60875_62075_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_050858643.1\|62417_62657_-	hypothetical protein	NA	NA	NA	NA
WP_050858642.1\|62706_63963_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_073546728.1\|64329_65598_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	6.9e-81	40.0
WP_000611142.1\|66169_66787_+	DUF1819 family protein	NA	NA	NA	NA
WP_000999546.1\|66783_67386_+	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_050858669.1\|67398_71013_+	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_050858670.1\|71061_74709_+	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
WP_050858671.1\|74708_75830_+	AAA family ATPase	NA	NA	NA	NA
WP_050858672.1\|75823_76393_+	hypothetical protein	NA	NA	NA	NA
WP_050858673.1\|76392_78990_+	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_001187275.1\|79000_81076_+\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_162780438.1\|83060_84029_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.1e-184	98.4
WP_001067855.1\|84111_84816_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_133301135.1\|84792_85002_+	hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	1.3e-05	64.1
WP_073546730.1\|87971_90077_+	UDP-forming cellulose synthase catalytic subunit	NA	NA	NA	NA
WP_001351999.1\|90140_92291_+	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA	NA	NA	NA
WP_073546731.1\|94253_97727_+	cellulose biosynthesis protein BcsC	NA	NA	NA	NA
WP_114142437.1\|98113_99387_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	6.8e-169	95.0
98103:99433	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP010233

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6776 : 13109

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043260.1\|6776_7592_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_000954592.1\|7921_8098_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_001067855.1\|9087_9792_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_014839980.1\|10177_10594_+	fosfomycin resistance glutathione transferase FosA3	Q2LI91	Bacillus_phage	2.0e-08	35.6
WP_014839979.1\|10598_11117_-	hypothetical protein	NA	NA	NA	NA
WP_014839978.1\|11116_11905_-	transcriptional regulator	NA	NA	NA	NA
WP_049824851.1\|11924_12395_-	TetR family transcriptional regulator	A0A0R6PIB6	Moraxella_phage	5.3e-10	32.7
WP_001067855.1\|12404_13109_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP010231

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP010231_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010231_1

1676984-1677110

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010231_1

>merge|NZ_CP010231|1|1676984-1677110|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>NZ_CP010231|1|1|1676984-1677110|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010231.1\|WP_000779105.1\|1679717_1680794_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP010231.1\|WP_001295211.1\|1664118_1664742_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP010231.1\|WP_000140569.1\|1686686_1687586_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP010231.1\|WP_024238396.1\|1657150_1657906_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP010231.1\|WP_000135040.1\|1678296_1678551_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP010231.1\|WP_000857257.1\|1682429_1684058_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP010231.1\|WP_001209902.1\|1684047_1685307_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP010231.1\|WP_000990765.1\|1669349_1670072_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP010231.1\|WP_123039031.1\|1659580_1663975_-\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP010231.1\|WP_024238395.1\|1657930_1659580_-\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP010231.1\|WP_000150333.1\|1687598_1687784_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
NZ_CP010231.1\|WP_000332037.1\|1677166_1678297_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP010231.1\|WP_000786545.1\|1655892_1657077_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP010231.1\|WP_000301050.1\|1678604_1679255_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP010231.1\|WP_001075164.1\|1674647_1676933_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP010231.1\|WP_000948732.1\|1680798_1682157_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP010231.1\|WP_000012305.1\|1664738_1666427_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP010231.1\|WP_001000379.1\|1685303_1686494_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP010231.1\|WP_001281225.1\|1666575_1669203_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP010231.1\|WP_001220077.1\|1670199_1673952_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059

Protein	Function_ID	Function_description	E-value
NZ_CP010231.1\|WP_000779105.1\|1679717_1680794_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP010231.1\|WP_001295211.1\|1664118_1664742_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141
NZ_CP010231.1\|WP_000140569.1\|1686686_1687586_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP010231.1\|WP_024238396.1\|1657150_1657906_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	3.80255e-148
NZ_CP010231.1\|WP_000135040.1\|1678296_1678551_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP010231.1\|WP_000857257.1\|1682429_1684058_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP010231.1\|WP_001209902.1\|1684047_1685307_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP010231.1\|WP_000990765.1\|1669349_1670072_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.65303e-171
NZ_CP010231.1\|WP_123039031.1\|1659580_1663975_-\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP010231.1\|WP_024238395.1\|1657930_1659580_-\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	3.10535e-127
NZ_CP010231.1\|WP_000150333.1\|1687598_1687784_+\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	1.35852e-30
NZ_CP010231.1\|WP_000332037.1\|1677166_1678297_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP010231.1\|WP_000786545.1\|1655892_1657077_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP010231.1\|WP_000301050.1\|1678604_1679255_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
NZ_CP010231.1\|WP_001075164.1\|1674647_1676933_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP010231.1\|WP_000948732.1\|1680798_1682157_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP010231.1\|WP_000012305.1\|1664738_1666427_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP010231.1\|WP_001000379.1\|1685303_1686494_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP010231.1\|WP_001281225.1\|1666575_1669203_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP010231.1\|WP_001220077.1\|1670199_1673952_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0

>NZ_CP010231.1|WP_001075164.1|1674647_1676933_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP010231.1|WP_001220077.1|1670199_1673952_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP010231.1|WP_000990765.1|1669349_1670072_+|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP010231.1|WP_001281225.1|1666575_1669203_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP010231.1|WP_000012305.1|1664738_1666427_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP010231.1|WP_001295211.1|1664118_1664742_-|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP010231.1|WP_123039031.1|1659580_1663975_-|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILVKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVRVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGENALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINPGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKDEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWHEPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_CP010231.1|WP_024238395.1|1657930_1659580_-|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLIIPDSSATQRVSASPATTGARTMAAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP010231.1|WP_024238396.1|1657150_1657906_-|YfaP-family-protein
MLLVALSPVAHSEGVQEVEIDAPLSGWHPVEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP010231.1|WP_000786545.1|1655892_1657077_+|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLTRIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NZ_CP010231.1|WP_000332037.1|1677166_1678297_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP010231.1|WP_000135040.1|1678296_1678551_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP010231.1|WP_000301050.1|1678604_1679255_-|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP010231.1|WP_000779105.1|1679717_1680794_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP010231.1|WP_000948732.1|1680798_1682157_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP010231.1|WP_000857257.1|1682429_1684058_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP010231.1|WP_001209902.1|1684047_1685307_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP010231.1|WP_001000379.1|1685303_1686494_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP010231.1|WP_000140569.1|1686686_1687586_+|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>NZ_CP010231.1|WP_000150333.1|1687598_1687784_+|hypothetical-protein
MTIAERLRQEGHQIGWQEGKLEGLHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH

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Crispr_ID: NZ_CP010231_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010231_2

2181309-2181703

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder

6 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP010231_2

>merge|NZ_CP010231|2|2181309-2181703|CRT,PILER-CR,CRISPRCasFinder
GGGAGTTCTACCGCAGGGGCGGGGAACTCCAAGTGATATCCATCATCGCATCCAGTGCGCCCGGTTTATCCCCGCTGACGCGGGGAACACACATGAATGTCGGTTCAGACCGTGTTTTTACCCGGTTTATCCCCGCTGGCGCGGGGAACACAGTGCTGGACCATTTCAAATTCACAATAGATTCGGTTTATCCCCGCTGGCGCGGGGAACACTGATATCCTGTCCAATACTGACGCGGTTATCGCGGTTTATCCCCGCTGGCGCGGGGAACACTAATACATGGGGCTACTGGATTATTATTTATTCGGTTTATCCCCGCTGGCGCGGGGAACACCGTCCGGATCGGTTTCGAGAATCTCTACGCTCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP010231|2|1|2181309-2181703|CRT
GGGAGTTCTACCGCAGGGGCGGGGAACTC	CAAGTGATATCCATCATCGCATCCAGTGCGCC
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACATGAATGTCGGTTCAGACCGTGTTTTTACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTGCTGGACCATTTCAAATTCACAATAGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATCCTGTCCAATACTGACGCGGTTATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACATGGGGCTACTGGATTATTATTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTCCGGATCGGTTTCGAGAATCTCTACGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP010231|2|1|2181370-2181703|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACATGAATGTCGGTTCAGACCGTGTTTTTACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTGCTGGACCATTTCAAATTCACAATAGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATCCTGTCCAATACTGACGCGGTTATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACATGGGGCTACTGGATTATTATTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTCCGGATCGGTTTCGAGAATCTCTACGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP010231|2|2|2181370-2181703|CRISPRCasFinder
CGGTTTATCCCCGCTGACGCGGGGAACAC	ACATGAATGTCGGTTCAGACCGTGTTTTTACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTGCTGGACCATTTCAAATTCACAATAGATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATATCCTGTCCAATACTGACGCGGTTATCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATACATGGGGCTACTGGATTATTATTTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTCCGGATCGGTTTCGAGAATCTCTACGCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010231.1\|WP_000281461.1\|2183009_2183660_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP010231.1\|WP_000246138.1\|2175449_2176160_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP010231.1\|WP_000517476.1\|2176178_2176490_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP010231.1\|WP_000085073.1\|2183641_2184388_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP010231.1\|WP_001084112.1\|2185998_2187561_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP010231.1\|WP_000206450.1\|2184398_2185454_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP010231.1\|WP_000568943.1\|2173924_2174974_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP010231.1\|WP_001246104.1\|2176683_2177007_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP010231.1\|WP_001090386.1\|2177661_2179089_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP010231.1\|WP_000029329.1\|2185465_2186002_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP010231.1\|WP_000144854.1\|2182089_2183013_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP010231.1\|WP_001300563.1\|2190595_2191708_+\|IS4-like-element-IS421-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP010231.1\|WP_000956460.1\|2191900_2192053_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP010231.1\|WP_049254555.1\|2187658_2190358_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP010231.1\|WP_000061856.1\|2181799_2182093_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP010231.1\|WP_001173676.1\|2177056_2177662_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP010231.1\|WP_000372108.1\|2179090_2179999_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP010231.1\|WP_000490430.1\|2180250_2181288_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP010231.1\|WP_001295182.1\|2173182_2173944_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP010231.1\|WP_001219242.1\|2174970_2175450_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851

Protein	Function_ID	Function_description	E-value
NZ_CP010231.1\|WP_000281461.1\|2183009_2183660_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.38075e-91
NZ_CP010231.1\|WP_000246138.1\|2175449_2176160_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP010231.1\|WP_000517476.1\|2176178_2176490_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP010231.1\|WP_000085073.1\|2183641_2184388_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.94879e-48
NZ_CP010231.1\|WP_001084112.1\|2185998_2187561_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP010231.1\|WP_000206450.1\|2184398_2185454_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.80924e-154
NZ_CP010231.1\|WP_000568943.1\|2173924_2174974_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP010231.1\|WP_001246104.1\|2176683_2177007_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP010231.1\|WP_001090386.1\|2177661_2179089_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP010231.1\|WP_000029329.1\|2185465_2186002_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.12087e-29
NZ_CP010231.1\|WP_000144854.1\|2182089_2183013_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	8.96044e-158
NZ_CP010231.1\|WP_001300563.1\|2190595_2191708_+\|IS4-like-element-IS421-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.16058e-15
NZ_CP010231.1\|WP_000956460.1\|2191900_2192053_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	4.96653e-13
NZ_CP010231.1\|WP_049254555.1\|2187658_2190358_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	4.61295e-180
NZ_CP010231.1\|WP_000061856.1\|2181799_2182093_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.21674e-65
NZ_CP010231.1\|WP_001173676.1\|2177056_2177662_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.20197e-146
NZ_CP010231.1\|WP_000372108.1\|2179090_2179999_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP010231.1\|WP_000490430.1\|2180250_2181288_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP010231.1\|WP_001295182.1\|2173182_2173944_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP010231.1\|WP_001219242.1\|2174970_2175450_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104

>NZ_CP010231.1|WP_000490430.1|2180250_2181288_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP010231.1|WP_000372108.1|2179090_2179999_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP010231.1|WP_001090386.1|2177661_2179089_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP010231.1|WP_001173676.1|2177056_2177662_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP010231.1|WP_001246104.1|2176683_2177007_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP010231.1|WP_000517476.1|2176178_2176490_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP010231.1|WP_000246138.1|2175449_2176160_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP010231.1|WP_001219242.1|2174970_2175450_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP010231.1|WP_000568943.1|2173924_2174974_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP010231.1|WP_001295182.1|2173182_2173944_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP010231.1|WP_000061856.1|2181799_2182093_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ
>NZ_CP010231.1|WP_000144854.1|2182089_2183013_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDLVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP010231.1|WP_000281461.1|2183009_2183660_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFTPELSTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSWQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP010231.1|WP_000085073.1|2183641_2184388_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPELLSAIISRRDYYTDAWWMVAVATTPDAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDRFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP010231.1|WP_000206450.1|2184398_2185454_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKVLAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTIRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTRQLEVAVQRITTLRENMNTVYEQKTDYASFDVMNKQGSMKDVLDFICA
>NZ_CP010231.1|WP_000029329.1|2185465_2186002_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGERASLRRSTTVNDVCLTDGFRLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMSKGRFTRLSAVKTPDELLRQLRRAVRLLNGSVNLDSLAEGVFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQNQ
>NZ_CP010231.1|WP_001084112.1|2185998_2187561_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDISAPRADLQGAVWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALQSLEHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGAQTTKFNKDHFIKRGVTEYLCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWINVMPQDEADLPLPKKFDDLVFPWLGPTRTSELAGAVVTDEQVNKLQAYWGMPRRIRIDFNTTTVGNCDICGEQSDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLDKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLSKWNKEIWLFARQDFDERVFTNPYEPVDLERVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP010231.1|WP_049254555.1|2187658_2190358_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKRNCFGLADYFRQLGISDKEQAAQFFAWLLCWHDIGKFARSFQQLYLPPELKIQEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLRRVIEMWMPVTTGHHGRPPDRMDELDNFLPEDKAAARDFLLEIKPLFPLIEIPAFWDDDEGIELIKHLSWYISATVVLADWTGSSTRFFPRVAHPMDIKSYWQKTLIQAQNALTVFPLKAKVAPFNGINTLFPFIENPTPLQQKVLDLDISQQGPQLFILEDVTGAGKTEAALILAHRLIAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGTEGQQEAPFLEKDDYPWLTHVTKSDVNSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRLWCIEQRQDPEMANVILVNDDESCGYSATEGLIGKVG
>NZ_CP010231.1|WP_001300563.1|2190595_2191708_+|IS4-like-element-IS421-family-transposase
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
>NZ_CP010231.1|WP_000956460.1|2191900_2192053_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK

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Crispr_ID: NZ_CP010231_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010231_3

2208753-2209269

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
GGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

8 spacers

The CRISPR arrays of NZ_CP010231_3

>merge|NZ_CP010231|3|2208753-2209269|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCACGTCGGTTTATCCCCGCTGGCGCGGGGAACACGAAATGCTGGTGAGCGTTAATGCCGCAAACACAGGTTTATCCCCGCTGGCGCGGGGAACACATTACGCCTTTTTGCGATTGCCCGGTTTTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGTGTCGGCAAATCCCGAGGAAATAGAACCCCGGTTTATCCCCGCTGGCGCGGGGAACACCGAATCACGCCCCGCTTTTTACCGCGTCAGCGCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTGCTCCTGTTTTGTGCCGTAGTTACCGATCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP010231|3|3|2208753-2209269|CRISPRCasFinder
TGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATGCTGGTGAGCGTTAATGCCGCAAACAC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACGCCTTTTTGCGATTGCCCGGTTTTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTGTCGGCAAATCCCGAGGAAATAGAACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGAATCACGCCCCGCTTTTTACCGCGTCAGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGCTCCTGTTTTGTGCCGTAGTTACCGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP010231|3|2|2208753-2209269|CRT
TGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATGCTGGTGAGCGTTAATGCCGCAAACAC
AGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACGCCTTTTTGCGATTGCCCGGTTTTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTGTCGGCAAATCCCGAGGAAATAGAACCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGAATCACGCCCCGCTTTTTACCGCGTCAGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGCTCCTGTTTTGTGCCGTAGTTACCGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP010231|3|2|2208754-2209269|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATGCTGGTGAGCGTTAATGCCGCAAACACA
GGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACGCCTTTTTGCGATTGCCCGGTTTTTGCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTGTCGGCAAATCCCGAGGAAATAGAACCCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	CGAATCACGCCCCGCTTTTTACCGCGTCAGCGC
GGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTGCTCCTGTTTTGTGCCGTAGTTACCGATC
GGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010231.1\|WP_049253269.1\|2215617_2215953_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP010231.1\|WP_001288228.1\|2210418_2210559_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010231.1\|WP_001071648.1\|2214755_2215547_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP010231.1\|WP_000021321.1\|2204227_2205013_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP010231.1\|WP_000210878.1\|2212890_2214528_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP010231.1\|WP_000226815.1\|2216278_2218513_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP010231.1\|WP_001299652.1\|2200515_2201295_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP010231.1\|WP_023281448.1\|2218560_2219862_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP010231.1\|WP_000186450.1\|2219918_2222675_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP010231.1\|WP_001199973.1\|2209608_2210280_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP010231.1\|WP_000039730.1\|2206635_2208114_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP010231.1\|WP_000907716.1\|2199658_2200552_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP010231.1\|WP_049253382.1\|2198658_2198919_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP010231.1\|WP_000389121.1\|2197396_2198668_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP010231.1\|WP_000036723.1\|2211504_2212803_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP010231.1\|WP_000581941.1\|2215952_2216201_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP010231.1\|WP_049254805.1\|2202703_2204158_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP010231.1\|WP_073546571.1\|2205331_2206609_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP010231.1\|WP_001130266.1\|2198935_2199511_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP010231.1\|WP_072132995.1\|2201272_2202682_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929

Protein	Function_ID	Function_description	E-value
NZ_CP010231.1\|WP_049253269.1\|2215617_2215953_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	3.64724e-73
NZ_CP010231.1\|WP_000226815.1\|2216278_2218513_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP010231.1\|WP_001071648.1\|2214755_2215547_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP010231.1\|WP_000021321.1\|2204227_2205013_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP010231.1\|WP_000210878.1\|2212890_2214528_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP010231.1\|WP_001299652.1\|2200515_2201295_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP010231.1\|WP_023281448.1\|2218560_2219862_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP010231.1\|WP_000186450.1\|2219918_2222675_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP010231.1\|WP_001199973.1\|2209608_2210280_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP010231.1\|WP_000039730.1\|2206635_2208114_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	3.68061e-108
NZ_CP010231.1\|WP_000907716.1\|2199658_2200552_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	6.66577e-90
NZ_CP010231.1\|WP_049253382.1\|2198658_2198919_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.2067e-41
NZ_CP010231.1\|WP_000389121.1\|2197396_2198668_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.16926e-127
NZ_CP010231.1\|WP_000036723.1\|2211504_2212803_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP010231.1\|WP_000581941.1\|2215952_2216201_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	2.43005e-47
NZ_CP010231.1\|WP_049254805.1\|2202703_2204158_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	6.63645e-83
NZ_CP010231.1\|WP_073546571.1\|2205331_2206609_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	8.62589e-30
NZ_CP010231.1\|WP_001130266.1\|2198935_2199511_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP010231.1\|WP_072132995.1\|2201272_2202682_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.86262e-50

>NZ_CP010231.1|WP_000039730.1|2206635_2208114_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWSVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEINHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP010231.1|WP_073546571.1|2205331_2206609_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLTYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAVEAYRNMWLMGMAALVMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP010231.1|WP_000021321.1|2204227_2205013_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP010231.1|WP_049254805.1|2202703_2204158_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDEKVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILRELMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP010231.1|WP_072132995.1|2201272_2202682_-|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVSLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP010231.1|WP_001299652.1|2200515_2201295_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP010231.1|WP_000907716.1|2199658_2200552_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MAGLFTPKDAAMNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP010231.1|WP_001130266.1|2198935_2199511_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP010231.1|WP_049253382.1|2198658_2198919_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPKGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP010231.1|WP_000389121.1|2197396_2198668_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_CP010231.1|WP_001199973.1|2209608_2210280_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP010231.1|WP_001288228.1|2210418_2210559_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_CP010231.1|WP_000036723.1|2211504_2212803_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP010231.1|WP_000210878.1|2212890_2214528_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP010231.1|WP_001071648.1|2214755_2215547_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP010231.1|WP_049253269.1|2215617_2215953_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQARHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP010231.1|WP_000581941.1|2215952_2216201_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPTTLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP010231.1|WP_000226815.1|2216278_2218513_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP010231.1|WP_023281448.1|2218560_2219862_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDLNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP010231.1|WP_000186450.1|2219918_2222675_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

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Crispr_ID: NZ_CP010231_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010231_4

3941317-3941458

Orphan

Consensus_repeat	Method
AATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010231_4

>merge|NZ_CP010231|4|3941317-3941458|CRISPRCasFinder
AATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCATGCCTACA

>NZ_CP010231|4|4|3941317-3941458|CRISPRCasFinder
AATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACA	GGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCAC
AATGCCTGATGCGACGCTTGACGCGTCTTATCATGCCTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010231.1\|WP_001132955.1\|3951961_3952930_+\|phosphoserine-phosphatase	unknown	unknown	gnl\|CDD\|182988
NZ_CP010231.1\|WP_000107765.1\|3942528_3944079_-\|YjjI-family-glycine-radical-enzyme	unknown	unknown	gnl\|CDD\|182879
NZ_CP010231.1\|WP_000105843.1\|3950167_3951184_-\|lipoate--protein-ligase-LplA	unknown	unknown	gnl\|CDD\|179655
NZ_CP010231.1\|WP_001299187.1\|3939426_3940500_+\|patatin-family-protein	unknown	unknown	gnl\|CDD\|227013
NZ_CP010231.1\|WP_000563070.1\|3940496_3941279_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|171118
NZ_CP010231.1\|WP_073546634.1\|3929609_3932960_+\|short-chain-fatty-acid-transporter	unknown	unknown	gnl\|CDD\|285585
NZ_CP010231.1\|WP_000202564.1\|3936432_3938019_+\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP010231.1\|WP_000477828.1\|3945283_3946606_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_CP010231.1\|WP_073546635.1\|3948835_3950167_+\|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ	unknown	unknown	gnl\|CDD\|236623
NZ_CP010231.1\|WP_048943362.1\|3932959_3933544_+\|tail-fiber-assembly-protein	unknown	unknown	gnl\|CDD\|367075
NZ_CP010231.1\|WP_048943363.1\|3935952_3936213_-\|DinI-like-family-protein	unknown	unknown	gnl\|CDD\|182578
NZ_CP010231.1\|WP_000816471.1\|3946657_3947881_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP010231.1\|WP_000490275.1\|3939143_3939305_+\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP010231.1\|WP_005025120.1\|3933988_3935593_-\|TIR-domain-containing-protein	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|239569
NZ_CP010231.1\|WP_000224877.1\|3947937_3948657_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP010231.1\|WP_032202908.1\|3928945_3929545_+\|Ail/Lom-family-outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|115004
NZ_CP010231.1\|WP_000124615.1\|3951211_3951856_-\|YtjB-family-periplasmic-protein	unknown	unknown	gnl\|CDD\|236885
NZ_CP010231.1\|WP_001295412.1\|3944337_3945117_+\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
NZ_CP010231.1\|WP_001295410.1\|3938411_3939017_+\|molecular-chaperone-OsmY	unknown	unknown	gnl\|CDD\|182556
NZ_CP010231.1\|WP_001088381.1\|3941693_3942557_-\|YjjW-family-glycine-radical-enzyme-activase	unknown	unknown	gnl\|CDD\|274938

Protein	Function_ID	Function_description	E-value
NZ_CP010231.1\|WP_001132955.1\|3951961_3952930_+\|phosphoserine-phosphatase	gnl\|CDD\|182988	PRK11133, serB, phosphoserine phosphatase; Provisional.	0
NZ_CP010231.1\|WP_000107765.1\|3942528_3944079_-\|YjjI-family-glycine-radical-enzyme	gnl\|CDD\|182879	PRK10977, PRK10977, hypothetical protein; Provisional.	0
NZ_CP010231.1\|WP_000105843.1\|3950167_3951184_-\|lipoate--protein-ligase-LplA	gnl\|CDD\|179655	PRK03822, lplA, lipoate-protein ligase A; Provisional.	0
NZ_CP010231.1\|WP_001299187.1\|3939426_3940500_+\|patatin-family-protein	gnl\|CDD\|227013	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	2.13843e-167
NZ_CP010231.1\|WP_000563070.1\|3940496_3941279_+\|metal-dependent-hydrolase	gnl\|CDD\|171118	PRK11449, PRK11449, metal-dependent hydrolase.	8.13802e-179
NZ_CP010231.1\|WP_073546634.1\|3929609_3932960_+\|short-chain-fatty-acid-transporter	gnl\|CDD\|285585	pfam08400, phage_tail_N, Prophage tail fibre N-terminal. This domain is found at the N-terminus of prophage tail fibre proteins.	1.08728e-65
NZ_CP010231.1\|WP_000202564.1\|3936432_3938019_+\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP010231.1\|WP_000477828.1\|3945283_3946606_+\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_CP010231.1\|WP_073546635.1\|3948835_3950167_+\|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ	gnl\|CDD\|236623	PRK09775, PRK09775, type II toxin-antitoxin system HipA family toxin YjjJ.	0
NZ_CP010231.1\|WP_048943362.1\|3932959_3933544_+\|tail-fiber-assembly-protein	gnl\|CDD\|367075	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK. This family contains bacterial and phage tail fibre assembly proteins. E.coli contains several members of this family although the function of these proteins is uncertain. Using the lambda phage members as examples, there are both gptfa and gpK tail proteins here. GpK forms part of the TTC or tail-tip complex that is located at the distal end of the tail. TTCs form the platform on which the tail-tube proteins self-assemble and are also the attachment point for fibers or receptor-binding proteins that mediate phage-adsorption to the surface of the host cell. TTC assembly starts with gpJ, which is also known as the central tail fibre and is involved in host-cell adsorption. It is the C-terminus of gpJ that interacts with the lamB receptor on host cells. A number of intermediates including gpK then interact with gpJ during tail morphogenesis.	7.24108e-49
NZ_CP010231.1\|WP_048943363.1\|3935952_3936213_-\|DinI-like-family-protein	gnl\|CDD\|182578	PRK10597, PRK10597, DNA damage-inducible protein I; Provisional.	1.44143e-16
NZ_CP010231.1\|WP_000816471.1\|3946657_3947881_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP010231.1\|WP_000490275.1\|3939143_3939305_+\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	4.97087e-08
NZ_CP010231.1\|WP_005025120.1\|3933988_3935593_-\|TIR-domain-containing-protein	gnl\|CDD\|239569	cd03487, RT_Bac_retron_II, RT_Bac_retron_II: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	9.21317e-72
NZ_CP010231.1\|WP_000224877.1\|3947937_3948657_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	4.60382e-172
NZ_CP010231.1\|WP_032202908.1\|3928945_3929545_+\|Ail/Lom-family-outer-membrane-beta-barrel-protein	gnl\|CDD\|115004	pfam06316, Ail_Lom, Enterobacterial Ail/Lom protein. This family consists of several bacterial and phage Ail/Lom-like proteins. The Yersinia enterocolitica Ail protein is a known virulence factor. Proteins in this family are predicted to consist of eight transmembrane beta-sheets and four cell surface-exposed loops. It is thought that Ail directly promotes invasion and loop 2 contains an active site, perhaps a receptor-binding domain. The phage protein Lom is expressed during lysogeny, and encode host-cell envelope proteins. Lom is found in the bacterial outer membrane, and is homologous to virulence proteins of two other enterobacterial genera. It has been suggested that lysogeny may generally have a role in bacterial survival in animal hosts, and perhaps in pathogenesis.	6.66094e-119
NZ_CP010231.1\|WP_000124615.1\|3951211_3951856_-\|YtjB-family-periplasmic-protein	gnl\|CDD\|236885	PRK11246, PRK11246, YtjB family periplasmic protein.	1.17132e-151
NZ_CP010231.1\|WP_001295412.1\|3944337_3945117_+\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	0
NZ_CP010231.1\|WP_001295410.1\|3938411_3939017_+\|molecular-chaperone-OsmY	gnl\|CDD\|182556	PRK10568, PRK10568, molecular chaperone OsmY.	4.24288e-101
NZ_CP010231.1\|WP_001088381.1\|3941693_3942557_-\|YjjW-family-glycine-radical-enzyme-activase	gnl\|CDD\|274938	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family. Members of this family are radical SAM enzymes, designated YjjW in E. coli, that are paired with and appear to activate a glycyl radical enzyme of unknown function, designated YjjI. This activase and its target are found in Clostridial species as well as E. coli and cousins. Members of this family may be misannotated as pyruvate formate lyase activating enzyme. [Protein fate, Protein modification and repair].	2.33691e-165

>NZ_CP010231.1|WP_000563070.1|3940496_3941279_+|metal-dependent-hydrolase
MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCELRPEPEDEIAEVLLNNTYAVFSVRG
>NZ_CP010231.1|WP_001299187.1|3939426_3940500_+|patatin-family-protein
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVIDAPQANDPTFNNEDLA
>NZ_CP010231.1|WP_000490275.1|3939143_3939305_+|DUF1328-domain-containing-protein
MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP
>NZ_CP010231.1|WP_001295410.1|3938411_3939017_+|molecular-chaperone-OsmY
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRKVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
>NZ_CP010231.1|WP_000202564.1|3936432_3938019_+|peptide-chain-release-factor-3
MTSLLAAEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVSRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH
>NZ_CP010231.1|WP_048943363.1|3935952_3936213_-|DinI-like-family-protein
MRIEICIAKEKMTKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNEGLSVTRTTDKDLAKTFVQETLKDTWESADEWFVYSHHK
>NZ_CP010231.1|WP_005025120.1|3933988_3935593_-|TIR-domain-containing-protein
MHNFALANKKSPDFISELPQIEPKPYSNGHKIKWINHTLTSTEVTPPDNLIKICILIESGEIAITSVSDIANLLGVPAGQLLYILYRKKDNYRTFEIEKKNGKKRVINAPCGGLSILQTRLKPVLEYFYRPKKSAHGFIKGKSIITNAGMHIKKNFVVNIDLENYFESISFARVYGIFKSKPFNFAHPAATVLAQLCTHNGKLPQGACTSPILANIASASLDKQLTQFAGRKKISYSRYADDITFSFNQRNIDIIKKNDDGSYSLSETIDNIISKNGFKINYDKFRVQTRNTRQSVTGLVVNDKVNINRRYIRITRSMIHRWTDDKLKYALLFATEKGYQAKDNNHAIQIFRNHIYGRLSFIKMVRGKDYPGYLKLMSYMSHNDPLKTQEGLRAMKETENFDVFICHASEDKKDIAIPIYDELTKLKISAFIDHVEIKWGDSLIDKINAALVKSKYVIAILSANSVNKEWPQKELRAVLASEISSGDVKLLTLLKKEDEEVVNLSLPLLSDKFYMVYDNNPEVVANNIKSLLQR
>NZ_CP010231.1|WP_048943362.1|3932959_3933544_+|tail-fiber-assembly-protein
MAFRMSEQPRTITIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDDASWYLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNSLMQVASEHIAPLQDAADLKIATEEENSLLEAWKKYRVLLNRVDTSTAPDIEWPTVPVME
>NZ_CP010231.1|WP_073546634.1|3929609_3932960_+|short-chain-fatty-acid-transporter
MAVRISGVLKDGAGKPIQNCTIQLKARRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVARNASVVAQNTAAAKKSASDASTSASEAATRATDAAGSARAASTSAGQAASSAQSASSSAGTASTKASEASKSAAAAESSKSAAATSAAAAKTSETNAAASQQSAATSASAATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASSASASKDEATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGRFLNNINAVSKTDFADKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAVAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGAHTHSMTFVSGGSSGAPGSGASDYSKYSVNTSSAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA
>NZ_CP010231.1|WP_032202908.1|3928945_3929545_+|Ail/Lom-family-outer-membrane-beta-barrel-protein
MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAGYLHASTNVSGSDDLNGINVKYRYEFTDTLGMVTSFSYAGDKNRQLTRYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSAYAMAGVVYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF
>NZ_CP010231.1|WP_001088381.1|3941693_3942557_-|YjjW-family-glycine-radical-enzyme-activase
MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTMGRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEVLSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEKLLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQVDYLHHIDELATFIKRLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVSRLIFPALYL
>NZ_CP010231.1|WP_000107765.1|3942528_3944079_-|YjjI-family-glycine-radical-enzyme
MSTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDVRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAALKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
>NZ_CP010231.1|WP_001295412.1|3944337_3945117_+|deoxyribose-phosphate-aldolase
MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY
>NZ_CP010231.1|WP_000477828.1|3945283_3946606_+|thymidine-phosphorylase
MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLTSGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSDMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE
>NZ_CP010231.1|WP_000816471.1|3946657_3947881_+|phosphopentomutase
MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF
>NZ_CP010231.1|WP_000224877.1|3947937_3948657_+|purine-nucleoside-phosphorylase
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
>NZ_CP010231.1|WP_073546635.1|3948835_3950167_+|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ
MSELTDLLLQGPRSAPELRQRLAISQATFSRLVAREDRVIRFGKARATRYALLRPYRGIERIPVWRVDDAGKAHKFADIQLCWPQGSCLVTGGKGDEQWFDGLPWYLTDLRPQGFLGRAWGRNLAGQLNLTEDIRLWQEEDVLYALTVFNGEYTGGWLVGERNYQRWITAPRPAAIPLDQKLTRYEQLAHDALAGEIVGSSAGGEQPKFTCYVQTPSGNKHVLVKFTVPQQTAVSQRWGDLLIAESIAAQILCDGGIHAIESTVLVTSNRQVFLEAQRFDCKGNDGRLPIVSLEAVQSEFISSPGSWPEAMRRLCEQQFVTHQSVAQTEVIWAFGQLIANSDMHAGNLSFYLSEPPFALTPVYDMLPMAYAPNSAGMLRDAAIEVKFDLNVSKSAWLTAIPLAQQFWQMVAGDPRISEAFRHIAQEMPEKIRQIEGKVARMGG
>NZ_CP010231.1|WP_000105843.1|3950167_3951184_-|lipoate--protein-ligase-LplA
MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAISETFFAHYGERTEAEIISPDKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRTQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWIAGAVR
>NZ_CP010231.1|WP_000124615.1|3951211_3951856_-|YtjB-family-periplasmic-protein
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
>NZ_CP010231.1|WP_001132955.1|3951961_3952930_+|phosphoserine-phosphatase
MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK

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Crispr_ID: NZ_CP010231_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010231_5

4351906-4352050

Orphan

Consensus_repeat	Method
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010231_5

>merge|NZ_CP010231|5|4351906-4352050|CRISPRCasFinder
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAA

>NZ_CP010231|5|5|4351906-4352050|CRISPRCasFinder
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA	GGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCG
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010231.1\|WP_120795376.1\|4349776_4349860_+\|protein-YkiD	unknown	unknown	unknown
NZ_CP010231.1\|WP_001295331.1\|4345664_4346474_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP010231.1\|WP_001142439.1\|4347808_4348000_+\|protein-YaiA	unknown	unknown	gnl\|CDD\|182421
NZ_CP010231.1\|WP_001009885.1\|4365166_4365748_-\|ACP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182207
NZ_CP010231.1\|WP_001221319.1\|4356579_4357782_-\|exonuclease-subunit-SbcD	unknown	unknown	gnl\|CDD\|182871
NZ_CP010231.1\|WP_000484048.1\|4344532_4345648_+\|diguanylate-cyclase-AdrA	unknown	unknown	gnl\|CDD\|182329
NZ_CP010231.1\|WP_001295329.1\|4361815_4363189_+\|proline-specific-permease-ProY	unknown	unknown	gnl\|CDD\|182566
NZ_CP010231.1\|WP_001266503.1\|4365840_4366911_+\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl\|CDD\|234666
NZ_CP010231.1\|WP_001298537.1\|4349937_4350849_-\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|225521
NZ_CP010231.1\|WP_000113933.1\|4357971_4358661_+\|phosphate-response-regulator-transcription-factor-PhoB	unknown	unknown	gnl\|CDD\|182277
NZ_CP010231.1\|WP_000149639.1\|4360420_4361740_+\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	unknown	unknown	gnl\|CDD\|185331
NZ_CP010231.1\|WP_000193393.1\|4347234_4347759_+\|shikimate-kinase-AroL	unknown	unknown	gnl\|CDD\|235153
NZ_CP010231.1\|WP_000158153.1\|4346593_4347058_+\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
NZ_CP010231.1\|WP_001326926.1\|4352126_4353311_-\|MFS-transporter-AraJ	unknown	unknown	gnl\|CDD\|182234
NZ_CP010231.1\|WP_001310597.1\|4363344_4365162_+\|maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|236759
NZ_CP010231.1\|WP_001219309.1\|4350973_4351882_+\|fructokinase	unknown	unknown	gnl\|CDD\|236565
NZ_CP010231.1\|WP_000941942.1\|4349006_4349291_+\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|182565
NZ_CP010231.1\|WP_001276420.1\|4348257_4348935_+\|AroM-family-protein	unknown	unknown	gnl\|CDD\|182491
NZ_CP010231.1\|WP_000893623.1\|4358718_4360014_+\|phosphate-regulon-sensor-histidine-kinase-PhoR	unknown	unknown	gnl\|CDD\|182895
NZ_CP010231.1\|WP_000698951.1\|4353436_4356583_-\|exonuclease-subunit-SbcC	unknown	unknown	gnl\|CDD\|182330

Protein	Function_ID	Function_description	E-value
NZ_CP010231.1\|WP_001221319.1\|4356579_4357782_-\|exonuclease-subunit-SbcD	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0
NZ_CP010231.1\|WP_001295331.1\|4345664_4346474_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.87564e-128
NZ_CP010231.1\|WP_001142439.1\|4347808_4348000_+\|protein-YaiA	gnl\|CDD\|182421	PRK10380, PRK10380, hypothetical protein; Provisional.	5.14477e-31
NZ_CP010231.1\|WP_001009885.1\|4365166_4365748_-\|ACP-phosphodiesterase	gnl\|CDD\|182207	PRK10045, PRK10045, ACP phosphodiesterase.	3.03368e-136
NZ_CP010231.1\|WP_000484048.1\|4344532_4345648_+\|diguanylate-cyclase-AdrA	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	0
NZ_CP010231.1\|WP_001295329.1\|4361815_4363189_+\|proline-specific-permease-ProY	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP010231.1\|WP_001266503.1\|4365840_4366911_+\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl\|CDD\|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	0
NZ_CP010231.1\|WP_001326926.1\|4352126_4353311_-\|MFS-transporter-AraJ	gnl\|CDD\|182234	PRK10091, PRK10091, MFS transport protein AraJ; Provisional.	0
NZ_CP010231.1\|WP_000113933.1\|4357971_4358661_+\|phosphate-response-regulator-transcription-factor-PhoB	gnl\|CDD\|182277	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB.	5.1688e-159
NZ_CP010231.1\|WP_000149639.1\|4360420_4361740_+\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	0
NZ_CP010231.1\|WP_000193393.1\|4347234_4347759_+\|shikimate-kinase-AroL	gnl\|CDD\|235153	PRK03731, aroL, shikimate kinase AroL.	2.43812e-108
NZ_CP010231.1\|WP_000158153.1\|4346593_4347058_+\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	3.53224e-80
NZ_CP010231.1\|WP_001298537.1\|4349937_4350849_-\|recombination-associated-protein-RdgC	gnl\|CDD\|225521	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair].	0
NZ_CP010231.1\|WP_001310597.1\|4363344_4365162_+\|maltodextrin-glucosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
NZ_CP010231.1\|WP_001219309.1\|4350973_4351882_+\|fructokinase	gnl\|CDD\|236565	PRK09557, PRK09557, fructokinase; Reviewed.	0
NZ_CP010231.1\|WP_000941942.1\|4349006_4349291_+\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|182565	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase.	5.85948e-64
NZ_CP010231.1\|WP_001276420.1\|4348257_4348935_+\|AroM-family-protein	gnl\|CDD\|182491	PRK10481, PRK10481, hypothetical protein; Provisional.	2.13662e-120
NZ_CP010231.1\|WP_000893623.1\|4358718_4360014_+\|phosphate-regulon-sensor-histidine-kinase-PhoR	gnl\|CDD\|182895	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR.	0
NZ_CP010231.1\|WP_000698951.1\|4353436_4356583_-\|exonuclease-subunit-SbcC	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0

>NZ_CP010231.1|WP_001219309.1|4350973_4351882_+|fructokinase
MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWPQE
>NZ_CP010231.1|WP_001298537.1|4349937_4350849_-|recombination-associated-protein-RdgC
MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR
>NZ_CP010231.1|WP_120795376.1|4349776_4349860_+|protein-YkiD
MTQRPWSKLQRKTHNIAALKIIARRSE
>NZ_CP010231.1|WP_000941942.1|4349006_4349291_+|pyrimidine/purine-nucleoside-phosphorylase
MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL
>NZ_CP010231.1|WP_001276420.1|4348257_4348935_+|AroM-family-protein
MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSLGNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIARLAAELLV
>NZ_CP010231.1|WP_001142439.1|4347808_4348000_+|protein-YaiA
MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE
>NZ_CP010231.1|WP_000193393.1|4347234_4347759_+|shikimate-kinase-AroL
MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC
>NZ_CP010231.1|WP_000158153.1|4346593_4347058_+|YaiI/YqxD-family-protein
MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAAINPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRGQM
>NZ_CP010231.1|WP_001295331.1|4345664_4346474_-|pyrroline-5-carboxylate-reductase
MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS
>NZ_CP010231.1|WP_000484048.1|4344532_4345648_+|diguanylate-cyclase-AdrA
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA
>NZ_CP010231.1|WP_001326926.1|4352126_4353311_-|MFS-transporter-AraJ
MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKPLG
>NZ_CP010231.1|WP_000698951.1|4353436_4356583_-|exonuclease-subunit-SbcC
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK
>NZ_CP010231.1|WP_001221319.1|4356579_4357782_-|exonuclease-subunit-SbcD
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
>NZ_CP010231.1|WP_000113933.1|4357971_4358661_+|phosphate-response-regulator-transcription-factor-PhoB
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
>NZ_CP010231.1|WP_000893623.1|4358718_4360014_+|phosphate-regulon-sensor-histidine-kinase-PhoR
MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD
>NZ_CP010231.1|WP_000149639.1|4360420_4361740_+|branched-chain-amino-acid-transporter-carrier-protein-BrnQ
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
>NZ_CP010231.1|WP_001295329.1|4361815_4363189_+|proline-specific-permease-ProY
MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ
>NZ_CP010231.1|WP_001310597.1|4363344_4365162_+|maltodextrin-glucosidase
MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN
>NZ_CP010231.1|WP_001009885.1|4365166_4365748_-|ACP-phosphodiesterase
MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL
>NZ_CP010231.1|WP_001266503.1|4365840_4366911_+|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE

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Crispr_ID: NZ_CP010231_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010231_6

4492193-4492289

Orphan

Consensus_repeat	Method
GCTTGACGCGTCTTATCAGGCCTACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010231_6

>merge|NZ_CP010231|6|4492193-4492289|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAACTGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTTGACGCATCTTATCAGGCCTACAA

>NZ_CP010231|6|6|4492193-4492289|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAA	CTGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGAT
GCTTGACGCATCTTATCAGGCCTACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010231.1\|WP_001143558.1\|4496858_4497380_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP010231.1\|WP_000912345.1\|4495437_4496823_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP010231.1\|WP_000729160.1\|4497701_4498568_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP010231.1\|WP_000580830.1\|4487506_4489174_+\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP010231.1\|WP_000815566.1\|4492353_4493421_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP010231.1\|WP_001468137.1\|4484883_4486119_-\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_CP010231.1\|WP_073546679.1\|4500524_4503134_+\|fimbrial-biogenesis-usher-protein	unknown	unknown	gnl\|CDD\|185120
NZ_CP010231.1\|WP_073546678.1\|4486140_4487190_-\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
NZ_CP010231.1\|WP_000495365.1\|4489183_4490443_+\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP010231.1\|WP_000212253.1\|4494044_4494767_-\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP010231.1\|WP_000776555.1\|4499038_4499581_+\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
NZ_CP010231.1\|WP_000540943.1\|4484087_4484873_-\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|225796
NZ_CP010231.1\|WP_001306952.1\|4490453_4491269_+\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP010231.1\|WP_000255997.1\|4494769_4495264_-\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734
NZ_CP010231.1\|WP_000190288.1\|4497487_4497700_-\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_CP010231.1\|WP_001351650.1\|4493417_4493927_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP010231.1\|WP_001302767.1\|4481391_4482693_+\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
NZ_CP010231.1\|WP_000006900.1\|4479973_4481335_+\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193
NZ_CP010231.1\|WP_000855378.1\|4491265_4492159_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_CP010231.1\|WP_073546677.1\|4482714_4483860_+\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152

Protein	Function_ID	Function_description	E-value
NZ_CP010231.1\|WP_001143558.1\|4496858_4497380_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
NZ_CP010231.1\|WP_000912345.1\|4495437_4496823_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP010231.1\|WP_000729160.1\|4497701_4498568_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP010231.1\|WP_000580830.1\|4487506_4489174_+\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
NZ_CP010231.1\|WP_000815566.1\|4492353_4493421_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	5.70382e-179
NZ_CP010231.1\|WP_001468137.1\|4484883_4486119_-\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP010231.1\|WP_073546679.1\|4500524_4503134_+\|fimbrial-biogenesis-usher-protein	gnl\|CDD\|185120	PRK15198, PRK15198, outer membrane usher protein FimD.	0
NZ_CP010231.1\|WP_073546678.1\|4486140_4487190_-\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
NZ_CP010231.1\|WP_000495365.1\|4489183_4490443_+\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.8369e-131
NZ_CP010231.1\|WP_000212253.1\|4494044_4494767_-\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.25513e-165
NZ_CP010231.1\|WP_000776555.1\|4499038_4499581_+\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
NZ_CP010231.1\|WP_000540943.1\|4484087_4484873_-\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|225796	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only].	1.36316e-150
NZ_CP010231.1\|WP_001306952.1\|4490453_4491269_+\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.28312e-37
NZ_CP010231.1\|WP_000255997.1\|4494769_4495264_-\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
NZ_CP010231.1\|WP_000190288.1\|4497487_4497700_-\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_CP010231.1\|WP_001351650.1\|4493417_4493927_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	2.09217e-91
NZ_CP010231.1\|WP_001302767.1\|4481391_4482693_+\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
NZ_CP010231.1\|WP_000006900.1\|4479973_4481335_+\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
NZ_CP010231.1\|WP_000855378.1\|4491265_4492159_+\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_CP010231.1\|WP_073546677.1\|4482714_4483860_+\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0

>NZ_CP010231.1|WP_000855378.1|4491265_4492159_+|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>NZ_CP010231.1|WP_001306952.1|4490453_4491269_+|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>NZ_CP010231.1|WP_000495365.1|4489183_4490443_+|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_CP010231.1|WP_000580830.1|4487506_4489174_+|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>NZ_CP010231.1|WP_073546678.1|4486140_4487190_-|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVNALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNLFAQ
>NZ_CP010231.1|WP_001468137.1|4484883_4486119_-|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPTGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLSGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKRQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPDAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKDLVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>NZ_CP010231.1|WP_000540943.1|4484087_4484873_-|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAHAEDSQIFLYKRRYVPIEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_CP010231.1|WP_073546677.1|4482714_4483860_+|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKSAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>NZ_CP010231.1|WP_001302767.1|4481391_4482693_+|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>NZ_CP010231.1|WP_000006900.1|4479973_4481335_+|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ
>NZ_CP010231.1|WP_000815566.1|4492353_4493421_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_CP010231.1|WP_001351650.1|4493417_4493927_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRNAQTDEVLENPDPRGAA
>NZ_CP010231.1|WP_000212253.1|4494044_4494767_-|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_CP010231.1|WP_000255997.1|4494769_4495264_-|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_CP010231.1|WP_000912345.1|4495437_4496823_+|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_CP010231.1|WP_001143558.1|4496858_4497380_-|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>NZ_CP010231.1|WP_000190288.1|4497487_4497700_-|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_CP010231.1|WP_000729160.1|4497701_4498568_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_CP010231.1|WP_000776555.1|4499038_4499581_+|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>NZ_CP010231.1|WP_073546679.1|4500524_4503134_+|fimbrial-biogenesis-usher-protein
MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPALLLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRSGNSQQSSSFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADDSRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNISQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRENALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQAAYGTLGVGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQTGILTDWRGYAVMPYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRCIAHYVLPKQSLQQAVTVISAVCTHPGS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11835-11866	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42178	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36520-36551	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1588	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9506-9537	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94787	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65534-65565	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61947	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64165-64196	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20317	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119284-119315	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85099-85130	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46719	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42116-42147	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87237-87268	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81884	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70500-70531	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47892	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62997-63028	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	MH422554	Escherichia phage P1, complete genome	87194-87225	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NC_050152	Enterobacteria phage P7, complete genome	93995-94026	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58645-58676	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NC_031129	Salmonella phage SJ46, complete genome	77363-77394	0	1.0
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	MH445381	Escherichia virus P1, complete genome	56870-56901	0	1.0
NZ_CP010231_2	2.1\|2181338\|32\|NZ_CP010231\|CRT	2181338-2181369	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	2	0.938
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17440-17471	2	0.938
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122310-122341	2	0.938
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6029-6060	2	0.938
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15152	2	0.938
NZ_CP010231_2	2.2\|2181399\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181399-2181430	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131402-131433	2	0.938
NZ_CP010231_3	3.4\|2208965\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2208965-2208996	32	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3605	3	0.906
NZ_CP010231_3	3.4\|2208965\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2208965-2208996	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3598	3	0.906
NZ_CP010231_3	3.4\|2208965\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2208965-2208996	32	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21074	3	0.906
NZ_CP010231_3	3.12\|2208965\|33\|NZ_CP010231\|PILER-CR	2208965-2208997	33	NZ_LR134258	Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence	3574-3606	4	0.879
NZ_CP010231_3	3.12\|2208965\|33\|NZ_CP010231\|PILER-CR	2208965-2208997	33	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	3567-3599	4	0.879
NZ_CP010231_3	3.12\|2208965\|33\|NZ_CP010231\|PILER-CR	2208965-2208997	33	KY271401	Klebsiella phage 1 LV-2017, complete genome	21043-21075	4	0.879
NZ_CP010231_3	3.4\|2208965\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2208965-2208996	32	KY653119	Morganella phage IME1369_02, complete genome	18217-18248	5	0.844
NZ_CP010231_3	3.12\|2208965\|33\|NZ_CP010231\|PILER-CR	2208965-2208997	33	KY653119	Morganella phage IME1369_02, complete genome	18216-18248	6	0.818
NZ_CP010231_2	2.1\|2181338\|32\|NZ_CP010231\|CRT	2181338-2181369	32	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	112768-112799	7	0.781
NZ_CP010231_3	3.3\|2208904\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2208904-2208935	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
NZ_CP010231_2	2.1\|2181338\|32\|NZ_CP010231\|CRT	2181338-2181369	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	141278-141309	8	0.75
NZ_CP010231_2	2.1\|2181338\|32\|NZ_CP010231\|CRT	2181338-2181369	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1428097-1428128	8	0.75
NZ_CP010231_2	2.6\|2181643\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181643-2181674	32	MF773750	Mycobacterium phage OKCentral2016, complete genome	32038-32069	8	0.75
NZ_CP010231_2	2.6\|2181643\|32\|NZ_CP010231\|CRT,PILER-CR,CRISPRCasFinder	2181643-2181674	32	JX307704	Mycobacterium virus Goose, complete genome	32135-32166	8	0.75
NZ_CP010231_3	3.3\|2208904\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2208904-2208935	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
NZ_CP010231_3	3.7\|2209148\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2209148-2209179	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	965187-965218	8	0.75
NZ_CP010231_3	3.11\|2208904\|33\|NZ_CP010231\|PILER-CR	2208904-2208936	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
NZ_CP010231_4	4.1\|3941358\|60\|NZ_CP010231\|CRISPRCasFinder	3941358-3941417	60	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4158-4217	8	0.867
NZ_CP010231_4	4.1\|3941358\|60\|NZ_CP010231\|CRISPRCasFinder	3941358-3941417	60	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4157-4216	8	0.867
NZ_CP010231_4	4.1\|3941358\|60\|NZ_CP010231\|CRISPRCasFinder	3941358-3941417	60	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	115798-115857	8	0.867
NZ_CP010231_4	4.1\|3941358\|60\|NZ_CP010231\|CRISPRCasFinder	3941358-3941417	60	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4157-4216	8	0.867
NZ_CP010231_4	4.1\|3941358\|60\|NZ_CP010231\|CRISPRCasFinder	3941358-3941417	60	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4157-4216	8	0.867
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
NZ_CP010231_3	3.5\|2209026\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2209026-2209057	32	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	246573-246604	9	0.719
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
NZ_CP010231_3	3.4\|2208965\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2208965-2208996	32	MF158039	Shigella phage Sf12, complete genome	4975-5006	10	0.688
NZ_CP010231_3	3.4\|2208965\|32\|NZ_CP010231\|CRISPRCasFinder,CRT	2208965-2208996	32	MF158042	Shigella phage Sd1, complete genome	938-969	10	0.688
NZ_CP010231_5	5.1\|4351949\|59\|NZ_CP010231\|CRISPRCasFinder	4351949-4352007	59	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	97-155	10	0.831
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
NZ_CP010231_3	3.12\|2208965\|33\|NZ_CP010231\|PILER-CR	2208965-2208997	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
NZ_CP010231_3	3.12\|2208965\|33\|NZ_CP010231\|PILER-CR	2208965-2208997	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
NZ_CP010231_4	4.1\|3941358\|60\|NZ_CP010231\|CRISPRCasFinder	3941358-3941417	60	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7435-7494	11	0.817
NZ_CP010231_4	4.1\|3941358\|60\|NZ_CP010231\|CRISPRCasFinder	3941358-3941417	60	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84259-84318	11	0.817
NZ_CP010231_5	5.1\|4351949\|59\|NZ_CP010231\|CRISPRCasFinder	4351949-4352007	59	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40375-40433	11	0.814
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
NZ_CP010231_4	4.1\|3941358\|60\|NZ_CP010231\|CRISPRCasFinder	3941358-3941417	60	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40377-40436	14	0.767
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
NZ_CP010231_1	1.1\|1677023\|49\|NZ_CP010231\|CRISPRCasFinder	1677023-1677071	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

2. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

3. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

4. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

5. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

6. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

7. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

8. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

9. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

10. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

11. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

12. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

13. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

14. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

15. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

16. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

17. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

18. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

19. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

20. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

21. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

22. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

23. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

24. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaccgtgtttttacc	Protospacer
********************************

25. spacer 2.1|2181338|32|NZ_CP010231|CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 2, identity: 0.938

caagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
caagtgatgtccatcatcgcatccagtgcgtc	Protospacer
********.*********************.*

26. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaacgtgttttcacc	Protospacer
******************* ********.***

27. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcagaacgtgttttcacc	Protospacer
******************* ********.***

28. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgacggtttagaccgtgtttttacc	Protospacer
********* *****.****************

29. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgacggtttagaccgtgtttttacc	Protospacer
********* *****.****************

30. spacer 2.2|2181399|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

acatgaatgtcggttcagaccgtgtttttacc	CRISPR spacer
acatgaatgtcggttcataacgtgtttttacc	Protospacer
***************** * ************

31. spacer 3.4|2208965|32|NZ_CP010231|CRISPRCasFinder,CRT matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

32. spacer 3.4|2208965|32|NZ_CP010231|CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

33. spacer 3.4|2208965|32|NZ_CP010231|CRISPRCasFinder,CRT matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 3, identity: 0.906

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaaccc	Protospacer
********************.*****.*** *

34. spacer 3.12|2208965|33|NZ_CP010231|PILER-CR matches to NZ_LR134258 (Klebsiella aerogenes strain NCTC9644 plasmid 5, complete sequence) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

35. spacer 3.12|2208965|33|NZ_CP010231|PILER-CR matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

36. spacer 3.12|2208965|33|NZ_CP010231|PILER-CR matches to KY271401 (Klebsiella phage 1 LV-2017, complete genome) position: , mismatch: 4, identity: 0.879

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtgagcgttaacgccgcgaacccc	Protospacer
********************.*****.*** *

37. spacer 3.4|2208965|32|NZ_CP010231|CRISPRCasFinder,CRT matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 5, identity: 0.844

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
gaaatgctggtcagcgttaacgccgcacaacc	Protospacer
*********** ********.****** *  *

38. spacer 3.12|2208965|33|NZ_CP010231|PILER-CR matches to KY653119 (Morganella phage IME1369_02, complete genome) position: , mismatch: 6, identity: 0.818

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
gaaatgctggtcagcgttaacgccgcacaacct	Protospacer
*********** ********.****** *  *

39. spacer 2.1|2181338|32|NZ_CP010231|CRT matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 7, identity: 0.781

caagtgat-atccatcatcgcatccagtgcgcc	CRISPR spacer
-ggttgatcgtccttcatcgcagccagtgcgcc	Protospacer
 .. **** .*** ******** **********

40. spacer 3.3|2208904|32|NZ_CP010231|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

tggctctgcaacagcagcacccatgaccacgt	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgg	Protospacer
.* ..* ****************.*******

41. spacer 2.1|2181338|32|NZ_CP010231|CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 8, identity: 0.75

caagtgatatccatcatcgcatccagtgcgcc	CRISPR spacer
ctcatcgcatccatcatcggttccagtgcgcc	Protospacer
*  .* ..***********  ***********

42. spacer 2.1|2181338|32|NZ_CP010231|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

caagtg---atatccatcatcgcatccagtgcgcc	CRISPR spacer
---gtgcgcccctccatcaccgcttccagtgcgcc	Protospacer
   ***    . *******.*** ***********

43. spacer 2.6|2181643|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to MF773750 (Mycobacterium phage OKCentral2016, complete genome) position: , mismatch: 8, identity: 0.75

cgtccggatcggtttcgagaatctctacgctc	CRISPR spacer
cgccgagatcggcttcgaggatctctacgagg	Protospacer
**.* .******.******.*********

44. spacer 2.6|2181643|32|NZ_CP010231|CRT,PILER-CR,CRISPRCasFinder matches to JX307704 (Mycobacterium virus Goose, complete genome) position: , mismatch: 8, identity: 0.75

cgtccggatcggtttcgagaatctctacgctc	CRISPR spacer
cgccgagatcggcttcgaggatctctacgagg	Protospacer
**.* .******.******.*********

45. spacer 3.3|2208904|32|NZ_CP010231|CRISPRCasFinder,CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tggctctgcaacagcagcacccatgaccacgt	CRISPR spacer
catcactgcaacatcagcatccatgaccgcat	Protospacer
.. * ******** *****.********.*.*

46. spacer 3.7|2209148|32|NZ_CP010231|CRISPRCasFinder,CRT matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgaatcacgccccgctttttaccgcgtcagcg	CRISPR spacer
caatgcccgctccgccttttaccgcgtcagtc	Protospacer
*.*  * ***.****.**************.

47. spacer 3.11|2208904|33|NZ_CP010231|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

tggctctgcaacagcagcacccatgaccacgtc	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgga	Protospacer
.* ..* ****************.*******

48. spacer 4.1|3941358|60|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.867

ggtttgtgcc-gaaccgtaggccggataaggcgttcacgccgcatccggcagttggcgca	CRISPR spacer
-acttgtgcctgaacggtaggacggataaggcgttcacgccgcatccggcagtt-gtgca	Protospacer
 ..******* **** ***** ******************************** *.***

49. spacer 4.1|3941358|60|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.867

ggtttgtgcc-gaaccgtaggccggataaggcgttcacgccgcatccggcagttggcgca	CRISPR spacer
-acttgtgcctgaacggtaggacggataaggcgttcacgccgcatccggcagtt-gtgca	Protospacer
 ..******* **** ***** ******************************** *.***

50. spacer 4.1|3941358|60|NZ_CP010231|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 8, identity: 0.867

ggtttgtgcc-gaaccgtaggccggataaggcgttcacgccgcatccggcagttggcgca	CRISPR spacer
-acttgtgcctgaacggtaggacggataaggcgttcacgccgcatccggcagtt-gtgca	Protospacer
 ..******* **** ***** ******************************** *.***

51. spacer 4.1|3941358|60|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.867

ggtttgtgcc-gaaccgtaggccggataaggcgttcacgccgcatccggcagttggcgca	CRISPR spacer
-acttgtgcctgaacggtaggacggataaggcgttcacgccgcatccggcagtt-gtgca	Protospacer
 ..******* **** ***** ******************************** *.***

52. spacer 4.1|3941358|60|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.867

ggtttgtgcc-gaaccgtaggccggataaggcgttcacgccgcatccggcagttggcgca	CRISPR spacer
-acttgtgcctgaacggtaggacggataaggcgttcacgccgcatccggcagtt-gtgca	Protospacer
 ..******* **** ***** ******************************** *.***

53. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

54. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

55. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

56. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

57. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

58. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

59. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

60. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

61. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

62. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

63. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

64. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

65. spacer 3.5|2209026|32|NZ_CP010231|CRISPRCasFinder,CRT matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

attacgcctttttgcgattgcccggtttttgc	CRISPR spacer
tcgtcatctttttgcgattgggcggttttttc	Protospacer
 .  *..*************  ******** *

66. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

67. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

68. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

69. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

70. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

71. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

72. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

73. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

74. spacer 3.4|2208965|32|NZ_CP010231|CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 10, identity: 0.688

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaa	Protospacer
 ..   .*** ************.*******

75. spacer 3.4|2208965|32|NZ_CP010231|CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 10, identity: 0.688

gaaatgctggtgagcgttaatgccgcaaacac	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaa	Protospacer
 ..   .*** ************.*******

76. spacer 5.1|4351949|59|NZ_CP010231|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg-	CRISPR spacer
gagcacagaaccgtaggacggataaggcgttcacgccgcatccggcgat-cgtgcactga	Protospacer
*.   ************ ****************************.**  **** *.*

77. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

78. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

79. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

80. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

81. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

82. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

83. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

84. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

85. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

86. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

87. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

88. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

89. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

90. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

91. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

92. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

93. spacer 3.12|2208965|33|NZ_CP010231|PILER-CR matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

94. spacer 3.12|2208965|33|NZ_CP010231|PILER-CR matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

gaaatgctggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

95. spacer 4.1|3941358|60|NZ_CP010231|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 11, identity: 0.817

ggtttgtgccgaaccgtaggccggataaggcgttcacgccgcatccggcagttggcgcac	CRISPR spacer
aaactgcactcaaccgtaggccggataaggcgttcacgccgcatccggcaatt-gtgcac	Protospacer
.. .**..*. ***************************************.** *.****

96. spacer 4.1|3941358|60|NZ_CP010231|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 11, identity: 0.817

ggtttgtgccgaaccgtaggccggataaggcgttcacgccgcatccggcagttggcgcac	CRISPR spacer
aaactgcactcaaccgtaggccggataaggcgttcacgccgcatccggcaatt-gtgcac	Protospacer
.. .**..*. ***************************************.** *.****

97. spacer 5.1|4351949|59|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

-ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg	CRISPR spacer
tcgcacca-aaccgtaggccggataaggcgtttacgccgcatccggcaaaaagccgtacc	Protospacer
  *..*** ***********************.**************** ***.  * *

98. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

99. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

100. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

101. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

102. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

103. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

104. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

105. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

106. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

107. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

108. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

109. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

110. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

111. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

112. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

113. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

114. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

115. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

116. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

117. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

118. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

119. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

120. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

121. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

122. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

123. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

124. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

125. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

126. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

127. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

128. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

129. spacer 4.1|3941358|60|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.767

ggtttgtgccgaaccgtaggccggataaggcgttcacgccgcatccggcagttgg-cgca	CRISPR spacer
cactcgcaccaaaccgtaggccggataaggcgtttacgccgcatccggcaaaaagccgta	Protospacer
 ..*.*..**.***********************.***************.  .* **.*

130. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

131. spacer 1.1|1677023|49|NZ_CP010231|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

454156 : 501626

Enterobacteria_phage(36.54%)

tail,tRNA,integrase,terminase,lysis,holin,protease

attL 457887:457909|attR 508215:508237

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001297484.1\|454156_455263_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476093.1\|455316_455778_-	phosphatase NudJ	NA	NA	NA	NA
WP_001248691.1\|455787_456441_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444487.1\|456612_457863_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
457887:457909	attL	NA	NA	NA	NA
WP_000741339.1\|457976_459119_-\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	8.1e-206	99.7
WP_000088653.1\|459108_459345_-	excisionase	NA	NA	NA	NA
WP_000488406.1\|459484_459724_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	3.9e-38	94.9
WP_000763387.1\|459771_459990_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	1.7e-35	98.6
WP_077250171.1\|460088_460370_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	1.2e-46	98.9
WP_000548531.1\|460380_460572_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
WP_000149532.1\|460544_460727_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	2.8e-28	96.7
WP_000186792.1\|460723_461404_-	YqaJ viral recombinase family protein	A0A0P0ZCQ7	Stx2-converting_phage	4.6e-132	99.6
WP_000100847.1\|461400_462186_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995467.1\|462191_462488_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	3.6e-49	99.0
WP_000372937.1\|462562_462706_-	host cell division inhibitory peptide Kil	A0A0N7C2U2	Escherichia_phage	1.2e-18	100.0
WP_001198861.1\|462674_462839_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	1.1e-26	100.0
WP_000065374.1\|462911_463280_-	DUF2528 family protein	M1FPD2	Enterobacteria_phage	2.0e-65	100.0
WP_023156163.1\|463483_463663_-	hypothetical protein	M1FQU1	Enterobacteria_phage	1.5e-29	98.3
WP_000281856.1\|463929_464412_+	superinfection exclusion protein B	A4KWR7	Enterobacteria_phage	1.1e-87	100.0
WP_000340011.1\|464412_464736_-	antitermination protein	A4KWR8	Enterobacteria_phage	1.0e-52	99.1
WP_000618037.1\|465089_465494_-	hypothetical protein	Q716D7	Shigella_phage	4.3e-69	98.5
WP_000028392.1\|465490_466123_-	LexA family transcriptional regulator	K7P850	Enterobacteria_phage	1.6e-118	99.5
WP_001194218.1\|466228_466444_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	1.4e-31	100.0
WP_073546446.1\|466563_466857_+	hypothetical protein	A2SY75	Escherichia_phage	1.1e-45	99.0
WP_073546447.1\|466889_467789_+	replication protein	A0A0K2FJ31	Enterobacteria_phage	2.7e-172	99.0
WP_039025747.1\|467785_468487_+	Replication protein P	A0A0P0ZD31	Stx2-converting_phage	1.2e-127	98.3
WP_000145931.1\|468483_468774_+	protein ren	A0A1I9LJP5	Stx_converting_phage	9.6e-47	100.0
WP_063077928.1\|468869_469289_+	recombination protein NinB	A0A220NRM1	Escherichia_phage	2.2e-76	99.3
WP_000153280.1\|469285_469813_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	9.5e-101	100.0
WP_001254223.1\|469809_469986_+	NinE family protein	K7PHE6	Enterobacteria_phage	1.4e-27	98.3
WP_000386643.1\|469988_470330_+	DUF2591 family protein	Q76H72	Enterobacteria_phage	1.6e-61	96.5
WP_032178959.1\|470322_470517_+	protein ninF	NA	NA	NA	NA
WP_001099706.1\|470536_470899_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	9.5e-60	94.9
WP_032217959.1\|470895_471036_+	YlcG family protein	K7PHH3	Enterobacteria_phage	1.7e-09	68.9
WP_073546448.1\|471032_471722_+	antitermination protein	I6PDF8	Cronobacter_phage	4.9e-57	48.5
WP_032217963.1\|471943_472747_-	DUF3800 domain-containing protein	Q19UP3	Mannheimia_phage	5.0e-69	48.6
WP_000544528.1\|472975_473281_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	7.0e-40	87.6
WP_032217964.1\|473267_473744_+	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	1.7e-85	96.8
WP_001228696.1\|473960_474146_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.8e-15	98.2
WP_001097895.1\|474342_475800_+	Trk system potassium uptake protein TrkG	NA	NA	NA	NA
WP_001291094.1\|475937_476729_+	ParB N-terminal domain-containing protein	R4TG31	Halovirus	2.8e-48	40.2
WP_001204037.1\|476721_477654_+	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	1.4e-83	54.9
WP_000126788.1\|477631_477841_+	hypothetical protein	NA	NA	NA	NA
WP_000089447.1\|477844_478939_+	hypothetical protein	A0A0U2RXW9	Escherichia_phage	5.9e-113	80.5
WP_000625348.1\|478919_480221_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	59.6
WP_073546449.1\|480223_481630_+	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	1.1e-185	68.8
WP_001351715.1\|481613_482726_+	hypothetical protein	I6PD76	Cronobacter_phage	4.2e-114	54.5
WP_001551057.1\|482830_483595_+	hypothetical protein	G8C7P6	Escherichia_phage	1.8e-79	61.4
WP_000918487.1\|483693_484833_+	hypothetical protein	G8C7P7	Escherichia_phage	7.4e-159	75.0
WP_000634214.1\|485055_485451_+	hypothetical protein	NA	NA	NA	NA
WP_016231725.1\|485450_485834_+	hypothetical protein	A0A0P0I456	Acinetobacter_phage	2.2e-14	39.4
WP_001551059.1\|485834_486215_+	hypothetical protein	A0A059VF88	Pseudomonas_phage	2.9e-19	44.4
WP_000673077.1\|486211_486604_+	hypothetical protein	NA	NA	NA	NA
WP_072664314.1\|486630_487593_+	hypothetical protein	A0A059VG08	Pseudomonas_phage	3.8e-55	38.6
WP_122452218.1\|487743_488103_+	hypothetical protein	NA	NA	NA	NA
WP_032284309.1\|488210_488411_+	hypothetical protein	NA	NA	NA	NA
WP_053290123.1\|488574_491808_+\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	1.4e-106	33.6
WP_001152433.1\|492139_492838_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	2.1e-127	94.4
WP_064221486.1\|492843_493587_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.8e-150	98.0
WP_072664338.1\|493484_494132_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	3.1e-109	95.3
WP_073546450.1\|494191_497590_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	89.7
WP_072664238.1\|497656_498256_+	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	3.5e-107	96.0
WP_073546689.1\|498320_501626_+\|tail	phage tail protein	K7PGT9	Enterobacteria_phage	6.3e-275	68.1
508215:508237	attR	NA	NA	NA	NA

DBSCAN-SWA_2

896593 : 922086

Enterobacteria_phage(22.73%)

lysis,tail,integrase

attL 888292:888305|attR 921686:921699

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
888292:888305	attL	NA	NA	NA	NA
WP_063091469.1\|896593_898054_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	2.1e-41	29.4
WP_120795384.1\|900028_900142_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|900210_900444_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000086527.1\|900760_901351_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_072144121.1\|901448_901568_-	hypothetical protein	K7PMH7	Enterobacteria_phage	3.1e-12	84.6
WP_024205207.1\|901622_903020_-\|tail	tail fiber domain-containing protein	K7PGT9	Enterobacteria_phage	4.0e-215	89.4
WP_000592549.1\|904420_905380_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_000780584.1\|905572_906097_+	lipocalin family protein	A0A1W6JNX6	Morganella_phage	1.0e-46	52.9
WP_001204787.1\|906252_906630_-	antitermination protein	Q777W5	Enterobacteria_phage	1.8e-53	82.5
WP_001265274.1\|906647_907697_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	3.0e-114	58.2
WP_032236628.1\|907698_907977_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.3e-11	46.9
WP_000980999.1\|908043_908295_-	hypothetical protein	NA	NA	NA	NA
WP_000887491.1\|908511_908724_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.7e-29	97.1
WP_001533279.1\|908768_909047_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	1.3e-08	100.0
WP_001533280.1\|909127_910087_-	hypothetical protein	NA	NA	NA	NA
WP_001599153.1\|910503_910926_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.6e-64	92.6
WP_001533283.1\|910966_911932_-	hypothetical protein	U5P0A0	Shigella_phage	1.7e-55	60.2
WP_000705349.1\|911912_912434_-	hypothetical protein	NA	NA	NA	NA
WP_000476994.1\|912417_912645_-	transcriptional regulator	NA	NA	NA	NA
WP_001003381.1\|912722_913130_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.5e-24	46.2
WP_000379575.1\|913322_913478_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_000344950.1\|913479_914055_+	hypothetical protein	NA	NA	NA	NA
WP_000854559.1\|914541_914730_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001296931.1\|914726_914918_+\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_001774503.1\|915010_917482_+	exonuclease	A0A192Y6E0	Salmonella_phage	8.5e-59	57.5
WP_001296941.1\|917569_917806_+	excisionase family protein	S4TND0	Salmonella_phage	6.1e-15	50.7
WP_000876976.1\|917840_919121_+\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	1.0e-156	62.6
WP_001389342.1\|919122_919251_-	hypothetical protein	NA	NA	NA	NA
WP_000836066.1\|919308_920328_-	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	4.3e-17	26.2
WP_001295394.1\|920339_921554_-	starvation-sensing protein RspA	Q6A202	Oenococcus_phage	1.4e-46	29.0
WP_000598292.1\|921759_922086_-	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
921686:921699	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1539447 : 1548888

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_073546555.1\|1539447_1540584_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	8.5e-163	97.7
WP_063091647.1\|1540580_1542581_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.0
WP_001295429.1\|1542705_1543167_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_000950409.1\|1543206_1543677_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.2e-82	100.0
WP_000598641.1\|1543723_1544443_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|1544439_1546125_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_073546556.1\|1546346_1547078_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	3.1e-110	99.0
WP_001216963.1\|1547137_1547245_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|1547225_1547957_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_061350461.1\|1547961_1548888_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8

DBSCAN-SWA_4

2160761 : 2173944

Escherichia_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272928.1\|2160761_2163323_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6
WP_001141323.1\|2163428_2164085_+	protein-serine/threonine phosphatase	K7P7V3	Enterobacteria_phage	3.3e-50	45.8
WP_001272546.1\|2164135_2164933_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	4.5e-70	56.3
WP_000847985.1\|2165098_2166007_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_000590405.1\|2166003_2167266_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	8.3e-135	61.0
WP_001278994.1\|2167262_2167901_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_001136918.1\|2167905_2168682_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_049254918.1\|2168770_2170135_+	GntP family transporter	NA	NA	NA	NA
WP_000081550.1\|2170228_2171221_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_001272590.1\|2171283_2172423_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000254708.1\|2172562_2173189_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001295182.1\|2173182_2173944_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0

DBSCAN-SWA_5

3888330 : 3968641

Enterobacteria_phage(44.07%)

tail,tRNA,integrase,head,terminase,lysis,portal,capsid

attL 3881773:3881788|attR 3908771:3908786

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3881773:3881788	attL	NA	NA	NA	NA
WP_001218277.1\|3888330_3889554_+\|integrase	site-specific integrase	A5LH57	Enterobacteria_phage	4.0e-235	98.5
WP_048943335.1\|3889736_3893564_+	hypothetical protein	NA	NA	NA	NA
WP_000206803.1\|3893960_3894581_-	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	2.2e-112	91.3
WP_001242723.1\|3894580_3894943_-	phage protein	U5P092	Shigella_phage	4.4e-65	95.8
WP_000008209.1\|3894933_3895470_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	1.6e-100	98.9
WP_048943336.1\|3895597_3896422_-	DUF2303 family protein	U5P439	Shigella_phage	8.6e-149	99.3
WP_000135680.1\|3896487_3896850_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_001020632.1\|3897552_3898245_-	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	6.4e-121	96.5
WP_001191669.1\|3898342_3898603_+	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
WP_000526668.1\|3898595_3899153_+	protein YmfL	S5FXP0	Shigella_phage	1.7e-95	94.6
WP_001250269.1\|3899328_3899508_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000104941.1\|3899497_3900439_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	6.4e-140	93.0
WP_073546633.1\|3900435_3900930_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	1.7e-80	92.6
WP_032200251.1\|3900929_3901583_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	4.3e-127	99.1
WP_000210164.1\|3901579_3901906_+	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	9.2e-54	100.0
WP_000767146.1\|3901902_3902292_+	RusA family crossover junction endodeoxyribonuclease	A0A291AX14	Escherichia_phage	1.6e-68	99.2
WP_032305273.1\|3902311_3903109_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	1.5e-150	99.6
WP_001433852.1\|3903116_3904106_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.9e-195	99.7
WP_001047110.1\|3904119_3904872_+	antitermination protein	K7PGU5	Enterobacteria_phage	5.3e-137	99.2
WP_000917724.1\|3905125_3905329_+	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000799656.1\|3905479_3906532_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.7e-208	100.0
WP_000839596.1\|3906599_3906815_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001468348.1\|3906819_3907164_+	YdfR family protein	K7PGU6	Enterobacteria_phage	4.4e-38	96.4
WP_000370550.1\|3907129_3907402_-	hypothetical protein	NA	NA	NA	NA
WP_048943344.1\|3907507_3908041_+	lysozyme	K7PLY1	Enterobacteria_phage	5.3e-99	94.9
WP_001228702.1\|3908257_3908464_+	hypothetical protein	H6WRZ6	Salmonella_phage	5.3e-31	98.5
WP_001139678.1\|3908492_3908645_+	hypothetical protein	K7PKL2	Enterobacteria_phage	3.1e-20	96.0
WP_000079508.1\|3908996_3909407_-	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
3908771:3908786	attR	NA	NA	NA	NA
WP_001663509.1\|3909463_3909697_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
WP_000453611.1\|3910085_3910631_+	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
WP_001027268.1\|3910605_3912531_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.7
WP_000198149.1\|3912527_3912734_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_032358757.1\|3912730_3914332_+\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.1e-309	99.2
WP_048943348.1\|3914312_3915632_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.8e-231	97.9
WP_001338090.1\|3915641_3915974_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.5e-55	99.1
WP_048943349.1\|3916029_3917055_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	9.0e-188	97.4
WP_048943350.1\|3917096_3917492_+	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	2.4e-56	93.2
WP_000752996.1\|3917503_3917857_+\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	1.5e-62	99.1
WP_048943351.1\|3917868_3918447_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	97.9
WP_000683111.1\|3918443_3918839_+\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	5.0e-70	99.2
WP_048943399.1\|3918846_3919587_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	6.1e-130	98.0
WP_001357868.1\|3919602_3920025_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	8.2e-71	96.4
WP_000459457.1\|3920006_3920441_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
WP_048943353.1\|3920433_3922995_+\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	90.3
WP_000847345.1\|3922991_3923321_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.1e-58	98.2
WP_001152502.1\|3923320_3924019_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.9e-131	97.8
WP_048943354.1\|3924024_3924768_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.8e-145	95.5
WP_000090892.1\|3924704_3925337_+\|tail	tail assembly protein	C6ZCZ4	Enterobacteria_phage	2.7e-94	98.1
WP_048943357.1\|3925396_3928879_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.7
WP_032202908.1\|3928945_3929545_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	2.2e-109	98.5
WP_073546634.1\|3929609_3932960_+	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	7.3e-13	39.1
WP_048943362.1\|3932959_3933544_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.3e-103	94.8
WP_005025120.1\|3933988_3935593_-	TIR domain-containing protein	NA	NA	NA	NA
WP_048943363.1\|3935952_3936213_-	DinI-like family protein	A5LH55	Enterobacteria_phage	3.1e-36	95.1
WP_000202564.1\|3936432_3938019_+	peptide chain release factor 3	D0R0F5	Streptococcus_phage	5.3e-30	24.9
WP_001295410.1\|3938411_3939017_+	molecular chaperone OsmY	NA	NA	NA	NA
WP_000490275.1\|3939143_3939305_+	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	64.2
WP_001299187.1\|3939426_3940500_+	patatin family protein	NA	NA	NA	NA
WP_000563070.1\|3940496_3941279_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_001088381.1\|3941693_3942557_-	YjjW family glycine radical enzyme activase	NA	NA	NA	NA
WP_000107765.1\|3942528_3944079_-	YjjI family glycine radical enzyme	NA	NA	NA	NA
WP_001295412.1\|3944337_3945117_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_000477828.1\|3945283_3946606_+	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	8.8e-79	39.8
WP_000816471.1\|3946657_3947881_+	phosphopentomutase	NA	NA	NA	NA
WP_000224877.1\|3947937_3948657_+	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_073546635.1\|3948835_3950167_+	type II toxin-antitoxin system HipA family toxin YjjJ	NA	NA	NA	NA
WP_000105843.1\|3950167_3951184_-	lipoate--protein ligase LplA	NA	NA	NA	NA
WP_000124615.1\|3951211_3951856_-	YtjB family periplasmic protein	NA	NA	NA	NA
WP_001132955.1\|3951961_3952930_+	phosphoserine phosphatase	NA	NA	NA	NA
WP_001029692.1\|3952978_3954361_+	DNA repair protein RadA	NA	NA	NA	NA
WP_000093812.1\|3954381_3955614_+	multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	A0A0C5K935	Enterococcus_phage	1.6e-82	42.6
WP_000046749.1\|3955921_3957589_-	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	3.7e-42	26.4
WP_000409472.1\|3957799_3959737_+	murein transglycosylase	A0A1P8CWQ1	Bacillus_phage	5.2e-11	34.8
WP_000068679.1\|3959826_3960153_+	trp operon repressor	NA	NA	NA	NA
WP_001341279.1\|3960237_3960759_-	non-canonical purine NTP phosphatase	NA	NA	NA	NA
WP_000942344.1\|3960810_3961458_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB	NA	NA	NA	NA
WP_073546636.1\|3961454_3962324_-	MDR efflux pump AcrAB transcriptional activator RobA	NA	NA	NA	NA
WP_000875487.1\|3962534_3963008_+	protein CreA	NA	NA	NA	NA
WP_001188679.1\|3963020_3963710_+	two-component system response regulator CreB	W8CYM9	Bacillus_phage	8.8e-30	35.3
WP_001219588.1\|3963709_3965134_+	two-component system sensor histidine kinase CreC	Q8QKV7	Ectocarpus_siliculosus_virus	1.2e-09	21.7
WP_000920345.1\|3965191_3966544_+	cell envelope integrity protein CreD	NA	NA	NA	NA
WP_001194358.1\|3966602_3967319_-	two-component system response regulator ArcA	NA	NA	NA	NA
WP_001303782.1\|3967414_3967555_+	hypothetical protein	NA	NA	NA	NA
WP_001223188.1\|3967954_3968641_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_6

4222654 : 4234487

Enterobacteria_phage(77.78%)

integrase

attL 4217790:4217802|attR 4230865:4230877

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4217790:4217802	attL	NA	NA	NA	NA
WP_001285288.1\|4222654_4223758_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000893278.1\|4223769_4225023_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
WP_073546648.1\|4225376_4226543_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	8.4e-142	61.7
WP_077898783.1\|4226558_4228049_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_073546650.1\|4228679_4229243_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	3.4e-56	62.3
WP_073546651.1\|4229239_4229503_-	hypothetical protein	Q7M294	Enterobacteria_phage	8.5e-26	67.9
WP_073546652.1\|4229499_4230237_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.2e-80	65.0
WP_073546654.1\|4230786_4231053_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	7.5e-30	70.5
4230865:4230877	attR	NA	NA	NA	NA
WP_073546655.1\|4231049_4231598_+	ash family protein	Q7M2A7	Enterobacteria_phage	2.7e-29	64.9
WP_040226160.1\|4231594_4231822_+	hypothetical protein	NA	NA	NA	NA
WP_040226162.1\|4231818_4232139_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_073546656.1\|4232153_4234487_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP010232

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP010234

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP010233

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP010231

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection