CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018421	Acinetobacter baumannii strain XDR-BJ83 isolate male patient chromosome, complete genome	0 crisprs	cas3,DEDDh,WYL,csa3,RT	0	0	8	0
NZ_CP018422	Acinetobacter baumannii strain XDR-BJ83 isolate male patient plasmid pBJ83, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1153684 : 1168481

Acinetobacter_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001187844.1\|1153684_1154233_-	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	1.7e-97	100.0
WP_000893683.1\|1154495_1155995_+	xanthine dehydrogenase small subunit	A0A0P0IVM8	Acinetobacter_phage	6.1e-286	100.0
WP_001076817.1\|1155996_1158372_+	xanthine dehydrogenase molybdopterin binding subunit	A0A0P0I429	Acinetobacter_phage	0.0e+00	100.0
WP_001164226.1\|1158378_1159362_+	xanthine dehydrogenase accessory protein XdhC	A0A0P0IKN7	Acinetobacter_phage	2.0e-189	100.0
WP_000066126.1\|1159372_1160068_-	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	5.8e-122	100.0
WP_000608304.1\|1160077_1160884_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	7.9e-147	100.0
WP_001982145.1\|1160893_1161943_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	9.8e-190	100.0
WP_000281127.1\|1162298_1165031_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	0.0e+00	99.9
WP_000960548.1\|1165110_1167810_+	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	0.0e+00	100.0
WP_000566784.1\|1167905_1168481_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.2e-110	100.0

DBSCAN-SWA_2

1331440 : 1352284

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067858.1\|1331440_1332145_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000018326.1\|1332398_1333214_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.3e-161	98.5
WP_001067858.1\|1333326_1334031_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_014454105.1\|1335060_1335615_+	aminoglycoside N-acetyltransferase AAC(6')-Ib'	NA	NA	NA	NA
WP_002075262.1\|1335707_1336340_+	type B-3 chloramphenicol O-acetyltransferase CatB8	A0A2R8FE91	Brazilian_cedratvirus	3.5e-25	40.1
WP_001206316.1\|1336397_1337189_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000679427.1\|1337352_1337700_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|1337693_1338533_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000050481.1\|1338937_1340479_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000359986.1\|1341877_1342651_+	ArmA family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA
WP_077252464.1\|1342631_1342913_-	hypothetical protein	NA	NA	NA	NA
WP_002026779.1\|1343132_1343318_-	hypothetical protein	NA	NA	NA	NA
WP_002001451.1\|1343366_1344551_+\|transposase	IS4-like element ISEc29 family transposase	A0A0F7LAS3	uncultured_marine_virus	4.5e-50	35.4
WP_000052512.1\|1344949_1346425_+	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
WP_000155092.1\|1346480_1347365_+	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000753551.1\|1348008_1349568_-\|transposase	IS66-like element ISAba24 family transposase	S5VTD3	Leptospira_phage	4.0e-70	34.2
WP_000781558.1\|1349660_1350017_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.6e-22	45.9
WP_000555098.1\|1350019_1350304_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|1351579_1352284_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6

DBSCAN-SWA_3

2340010 : 2390763

Acinetobacter_phage(89.83%)

integrase,capsid,transposase,terminase

attL 2346874:2346890|attR 2393566:2393582

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085942227.1\|2340010_2341175_+\|transposase	IS3-like element ISAba22 family transposase	A0A0P0I4A4	Acinetobacter_phage	7.1e-165	100.0
WP_000151893.1\|2341421_2342015_-	hypothetical protein	A0A0P0HSM0	Acinetobacter_phage	5.1e-103	100.0
WP_001109862.1\|2342021_2342669_-	hypothetical protein	J7I4R4	Acinetobacter_phage	3.6e-118	100.0
WP_000999701.1\|2342679_2343360_-	hypothetical protein	A0A0P0IKS6	Acinetobacter_phage	4.6e-116	100.0
WP_001019736.1\|2343549_2344095_-	N-acetylmuramidase	A0A0N7IRF5	Acinetobacter_phage	1.8e-102	100.0
WP_000433900.1\|2344137_2344527_-	hypothetical protein	A0A0P0IYC0	Acinetobacter_phage	1.1e-66	100.0
WP_038341099.1\|2344639_2348065_-	bacteriophage protein	J7HXG3	Acinetobacter_phage	0.0e+00	93.9
2346874:2346890	attL	NA	NA	NA	NA
WP_000835160.1\|2348057_2348420_-	hypothetical protein	A0A0P0J0A2	Acinetobacter_phage	8.1e-51	79.2
WP_000368388.1\|2348416_2348923_-	DUF1833 family protein	J7HXQ5	Acinetobacter_phage	1.5e-90	97.0
WP_000277448.1\|2348922_2349321_-	hypothetical protein	J7I0X8	Acinetobacter_phage	4.1e-72	97.7
WP_000246069.1\|2349385_2349778_-	hypothetical protein	NA	NA	NA	NA
WP_000937383.1\|2349781_2350534_-	hypothetical protein	J7HXF9	Acinetobacter_phage	1.2e-32	34.4
WP_000046563.1\|2350608_2354916_-	tape measure protein	A0A0D4DC37	Acinetobacter_phage	0.0e+00	98.3
WP_000835645.1\|2354985_2355978_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	9.7e-22	46.9
WP_001103649.1\|2355974_2356130_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_000763623.1\|2356252_2356492_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_000720608.1\|2356540_2357335_-	hypothetical protein	A0A2H4J0E0	uncultured_Caudovirales_phage	1.7e-05	42.2
WP_000523922.1\|2357366_2357690_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_014466185.1\|2357698_2357875_-	hypothetical protein	A0A0R6PI25	Moraxella_phage	4.8e-09	59.6
WP_000966688.1\|2357973_2358378_-	type II toxin-antitoxin system HicB family antitoxin	A0A0D4DCG1	Acinetobacter_phage	3.9e-70	100.0
WP_000838146.1\|2358470_2358653_-	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	7.4e-29	100.0
WP_038338755.1\|2358978_2359488_-	hypothetical protein	A0A0D4DBX8	Acinetobacter_phage	6.0e-68	86.3
WP_020752401.1\|2359558_2360476_-	hypothetical protein	A0A0P0IL42	Acinetobacter_phage	1.8e-163	95.4
WP_020752400.1\|2360570_2361554_-	hypothetical protein	A0A0D4DCQ4	Acinetobacter_phage	3.8e-87	49.6
WP_020752399.1\|2361553_2361904_-	hypothetical protein	A0A0D4DCF7	Acinetobacter_phage	6.4e-53	89.7
WP_020752398.1\|2361999_2362218_-	hypothetical protein	A0A0P0I8C2	Acinetobacter_phage	5.6e-31	90.3
WP_073545229.1\|2362219_2362663_-	hypothetical protein	A0A0D4DBX3	Acinetobacter_phage	9.2e-65	81.6
WP_020752396.1\|2362619_2362988_-	hypothetical protein	A0A0D4DBN1	Acinetobacter_phage	1.8e-53	82.8
WP_020752395.1\|2362959_2363364_-	hypothetical protein	A0A0P0IKR8	Acinetobacter_phage	1.5e-66	94.0
WP_005119785.1\|2363375_2363546_-	hypothetical protein	NA	NA	NA	NA
WP_024435924.1\|2364263_2364632_-	hypothetical protein	A0A0P0I456	Acinetobacter_phage	7.2e-63	95.9
WP_020752393.1\|2364633_2365023_-	hypothetical protein	A0A0D4DC24	Acinetobacter_phage	2.5e-66	99.2
WP_020752392.1\|2365027_2365693_-	hypothetical protein	J7I4P7	Acinetobacter_phage	9.8e-103	90.0
WP_000214189.1\|2365759_2366716_-	hypothetical protein	A0A0D4DBM4	Acinetobacter_phage	2.1e-178	100.0
WP_000770052.1\|2366743_2367511_-	hypothetical protein	J7I0W4	Acinetobacter_phage	1.7e-119	99.6
WP_004736762.1\|2367625_2367940_-	hypothetical protein	X5I2L0	Pseudomonas_phage	1.2e-13	48.5
WP_020752389.1\|2368179_2368404_-	hypothetical protein	A0A0P0IY55	Acinetobacter_phage	4.7e-33	93.2
WP_020752388.1\|2368400_2369504_-\|capsid	minor capsid protein	A0A0D4DBL9	Acinetobacter_phage	2.1e-190	90.2
WP_020752387.1\|2369510_2370956_-	DUF4055 domain-containing protein	A0A0D4DCP1	Acinetobacter_phage	6.8e-274	95.6
WP_020752386.1\|2370952_2372380_-\|terminase	phage terminase large subunit	A0A0D4DCE6	Acinetobacter_phage	2.5e-257	89.7
WP_000212563.1\|2372369_2372840_-	DUF2280 domain-containing protein	A0A0D4DC15	Acinetobacter_phage	6.7e-82	99.4
WP_020752385.1\|2372898_2373540_-	hypothetical protein	J7I4N9	Acinetobacter_phage	2.2e-112	87.8
WP_020752384.1\|2373499_2373976_-	hypothetical protein	A0A0P0IRI6	Acinetobacter_phage	6.2e-59	75.5
WP_020752383.1\|2374027_2374489_-	hypothetical protein	A0A0P0HSF5	Acinetobacter_phage	3.2e-76	89.4
WP_000152665.1\|2375151_2375388_-	hypothetical protein	NA	NA	NA	NA
WP_001005050.1\|2375587_2375941_-	hypothetical protein	NA	NA	NA	NA
WP_001017703.1\|2376207_2376426_-	hypothetical protein	NA	NA	NA	NA
WP_000959662.1\|2376569_2377322_-	hypothetical protein	A0A0P0J081	Acinetobacter_phage	8.7e-140	100.0
WP_000100186.1\|2377332_2377734_-	DUF559 domain-containing protein	A0A0P0IKL1	Acinetobacter_phage	1.9e-69	100.0
WP_001288422.1\|2377733_2377958_-	hypothetical protein	A0A0P0IY41	Acinetobacter_phage	9.4e-34	100.0
WP_002018225.1\|2377950_2378313_-	hypothetical protein	A0A0N7IRE2	Acinetobacter_phage	1.0e-69	100.0
WP_000648413.1\|2378362_2378785_-	hypothetical protein	A0A0P0I8A5	Acinetobacter_phage	1.0e-76	100.0
WP_001031749.1\|2378771_2378906_-	putative phage replication protein	A0A0P0IR92	Acinetobacter_phage	1.1e-18	100.0
WP_000544506.1\|2378902_2379652_-	hypothetical protein	A0A0N7IRF0	Acinetobacter_phage	1.2e-136	98.4
WP_001110399.1\|2379644_2380595_-	YdaU family protein	A0A0P0I481	Acinetobacter_phage	1.6e-98	63.3
WP_001033653.1\|2380591_2381638_-	site-specific DNA-methyltransferase	A0A1B0VM49	Pseudomonas_phage	1.7e-109	57.9
WP_001095606.1\|2381634_2381925_-	hypothetical protein	NA	NA	NA	NA
WP_001217697.1\|2382227_2382404_-	hypothetical protein	NA	NA	NA	NA
WP_002055031.1\|2382531_2383221_+	helix-turn-helix domain-containing protein	A0A2H4JAJ5	uncultured_Caudovirales_phage	5.3e-59	73.1
WP_002055001.1\|2383293_2384184_+	hypothetical protein	NA	NA	NA	NA
WP_000054453.1\|2384184_2385051_+	hypothetical protein	NA	NA	NA	NA
WP_038338696.1\|2385253_2385703_+	hypothetical protein	A0A0N7IRF7	Acinetobacter_phage	5.5e-73	95.9
WP_000064469.1\|2385695_2386019_+	hypothetical protein	A0A0P0IVW1	Acinetobacter_phage	1.5e-43	79.4
WP_004793763.1\|2386029_2387151_+	ATP-binding protein	A0A0D4DBX7	Acinetobacter_phage	1.3e-211	99.7
WP_020752379.1\|2387147_2388224_+	hypothetical protein	A0A0D4DBR8	Acinetobacter_phage	6.0e-142	75.4
WP_000654849.1\|2388225_2388471_+	hypothetical protein	A0A0P0IVN4	Acinetobacter_phage	3.3e-40	98.8
WP_000453808.1\|2388473_2388683_+	hypothetical protein	A0A0P0IVS1	Acinetobacter_phage	6.3e-32	98.6
WP_000048750.1\|2388679_2388964_+	hypothetical protein	A0A0P0HSI5	Acinetobacter_phage	1.7e-43	94.7
WP_000015927.1\|2388967_2389225_+	hypothetical protein	A0A0P0J0B1	Acinetobacter_phage	4.7e-45	94.1
WP_000910238.1\|2389225_2389495_+	hypothetical protein	A0A0N7IRE8	Acinetobacter_phage	3.5e-43	100.0
WP_000773627.1\|2389500_2390763_-\|integrase	integrase family protein	A0A0P0IKP2	Acinetobacter_phage	1.6e-247	99.3
2393566:2393582	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2678637 : 2710672

Acinetobacter_phage(41.38%)

tail,portal,capsid,terminase,protease,head,integrase

attL 2678424:2678477|attR 2714509:2714562

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2678424:2678477	attL	NA	NA	NA	NA
WP_000115731.1\|2678637_2680002_+\|integrase	integrase family protein	A0A0R6PGY7	Moraxella_phage	2.9e-85	42.7
WP_001186629.1\|2679985_2680180_-	hypothetical protein	A0A1B1P9F8	Acinetobacter_phage	2.7e-13	54.1
WP_002018743.1\|2680274_2680445_-	hypothetical protein	NA	NA	NA	NA
WP_000265243.1\|2680413_2680782_-	hypothetical protein	NA	NA	NA	NA
WP_000095892.1\|2680781_2681291_-	lysozyme	A0A0B5L5F7	Acinetobacter_phage	3.8e-46	57.4
WP_000774828.1\|2681274_2681541_-	hypothetical protein	NA	NA	NA	NA
WP_001104854.1\|2681615_2681840_-	hypothetical protein	A0A0P0I8G9	Acinetobacter_phage	1.6e-33	95.9
WP_000078482.1\|2683930_2686765_-	hypothetical protein	A0A1B1P9G8	Acinetobacter_phage	4.9e-167	36.1
WP_001026372.1\|2686715_2687111_-	hypothetical protein	A0A1B1P9H4	Acinetobacter_phage	1.6e-28	52.8
WP_000587324.1\|2687107_2687617_-	DUF1833 family protein	NA	NA	NA	NA
WP_000882463.1\|2687619_2688081_-	hypothetical protein	NA	NA	NA	NA
WP_000246490.1\|2688096_2691690_-	transglycosylase SLT domain-containing protein	A0A0U4JEA4	Pseudomonas_phage	3.0e-44	39.9
WP_001031955.1\|2691752_2692085_-	hypothetical protein	A0A0P0IYG9	Acinetobacter_phage	1.1e-14	43.1
WP_000498808.1\|2692161_2692377_-	hypothetical protein	NA	NA	NA	NA
WP_001074127.1\|2692412_2692928_-\|tail	phage tail assembly chaperone family protein, TAC	NA	NA	NA	NA
WP_001062223.1\|2692929_2693406_-	hypothetical protein	A0A2H4JBZ0	uncultured_Caudovirales_phage	6.4e-56	66.2
WP_000598741.1\|2693477_2693852_-	DUF3168 domain-containing protein	Q9MCA6	Pseudomonas_phage	1.7e-19	44.5
WP_000235306.1\|2693851_2694337_-	HK97 gp10 family phage protein	A0A2H4JB20	uncultured_Caudovirales_phage	6.4e-27	45.3
WP_001139340.1\|2694340_2694697_-\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	1.9e-20	50.0
WP_000631202.1\|2694698_2694986_-\|head,tail	phage head-tail connector protein	A0A2H4J711	uncultured_Caudovirales_phage	2.5e-18	46.5
WP_000666093.1\|2694982_2695159_-	hypothetical protein	NA	NA	NA	NA
WP_000137059.1\|2695206_2696379_-\|capsid	phage major capsid protein	A0A2H4JD98	uncultured_Caudovirales_phage	9.2e-88	47.2
WP_000375469.1\|2696371_2697034_-\|head,protease	HK97 family phage prohead protease	A0A2H4JAI0	uncultured_Caudovirales_phage	6.2e-73	62.3
WP_000108390.1\|2697026_2698253_-\|portal	phage portal protein	A0A2H4J6S3	uncultured_Caudovirales_phage	3.9e-182	75.9
WP_000125540.1\|2698249_2699944_-\|terminase	terminase large subunit	A0A2H4J559	uncultured_Caudovirales_phage	2.2e-271	82.6
WP_001191044.1\|2700115_2700307_-	hypothetical protein	NA	NA	NA	NA
WP_001219090.1\|2700326_2700809_-\|terminase	terminase small subunit	A0A2H4J8R0	uncultured_Caudovirales_phage	5.9e-25	48.4
WP_000202128.1\|2700955_2701180_-	hypothetical protein	NA	NA	NA	NA
WP_000776297.1\|2701224_2701524_-	HNH endonuclease	A0A0R6PH58	Moraxella_phage	1.1e-21	61.2
WP_001079329.1\|2701453_2701747_-	hypothetical protein	NA	NA	NA	NA
WP_000063945.1\|2701752_2701935_-	hypothetical protein	NA	NA	NA	NA
WP_000433065.1\|2701924_2702455_-	hypothetical protein	A0A2H4JB76	uncultured_Caudovirales_phage	4.4e-37	44.0
WP_000856318.1\|2702470_2702869_-	hypothetical protein	T1S9H7	Salmonella_phage	4.8e-12	38.0
WP_000238616.1\|2702944_2703163_-	hypothetical protein	NA	NA	NA	NA
WP_000780217.1\|2703872_2704148_-	hypothetical protein	NA	NA	NA	NA
WP_001060708.1\|2704527_2705025_-	hypothetical protein	A0A0P0IY98	Acinetobacter_phage	1.4e-16	34.2
WP_001003589.1\|2705024_2705195_-	hypothetical protein	NA	NA	NA	NA
WP_000360556.1\|2705191_2705572_-	hypothetical protein	A0A0D4DBZ8	Acinetobacter_phage	3.0e-16	44.4
WP_001288609.1\|2705573_2705858_-	hypothetical protein	A0A1B1P9J7	Acinetobacter_phage	3.5e-33	63.8
WP_002018656.1\|2705850_2706213_-	hypothetical protein	A0A0N7IRE2	Acinetobacter_phage	4.3e-68	98.3
WP_000801891.1\|2706262_2706607_-	hypothetical protein	A0A068CDI0	Acinetobacter_phage	8.0e-40	75.2
WP_000180364.1\|2706878_2708291_-	replicative DNA helicase	I2GUI4	Acinetobacter_phage	6.5e-80	41.6
WP_000543838.1\|2708287_2709358_-	DUF1376 domain-containing protein	A9YWY6	Burkholderia_phage	5.4e-34	44.5
WP_001005282.1\|2709357_2709654_-	hypothetical protein	NA	NA	NA	NA
WP_000418954.1\|2710015_2710672_+	helix-turn-helix domain-containing protein	A0A0R6PJ00	Moraxella_phage	1.2e-31	36.9
2714509:2714562	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2721702 : 2750376

Acinetobacter_phage(93.55%)

capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001019739.1\|2721702_2722248_-	N-acetylmuramidase	A0A0B5L5G7	Acinetobacter_phage	4.7e-103	100.0
WP_000433907.1\|2722289_2722679_-	hypothetical protein	A0A0P0I8L9	Acinetobacter_phage	3.3e-66	99.2
WP_000598554.1\|2722746_2726172_-	hypothetical protein	A0A0P0HSH9	Acinetobacter_phage	0.0e+00	94.2
WP_000835160.1\|2726164_2726527_-	hypothetical protein	A0A0P0J0A2	Acinetobacter_phage	8.1e-51	79.2
WP_000368388.1\|2726523_2727030_-	DUF1833 family protein	J7HXQ5	Acinetobacter_phage	1.5e-90	97.0
WP_000277448.1\|2727029_2727428_-	hypothetical protein	J7I0X8	Acinetobacter_phage	4.1e-72	97.7
WP_000721057.1\|2727520_2728108_-	hypothetical protein	NA	NA	NA	NA
WP_000046573.1\|2728198_2732509_-	tape measure protein	A0A0D4DC37	Acinetobacter_phage	0.0e+00	98.3
WP_001275792.1\|2732636_2732900_-	hypothetical protein	NA	NA	NA	NA
WP_000721572.1\|2732901_2733582_-	hypothetical protein	A0A0R6PJY5	Moraxella_phage	2.5e-53	49.3
WP_000274931.1\|2733686_2734145_-	helix-turn-helix domain-containing protein	A0A0P0IRJ4	Acinetobacter_phage	1.1e-84	100.0
WP_000335868.1\|2734153_2734453_-	DUF4258 domain-containing protein	A0A0P0IE58	Acinetobacter_phage	7.4e-50	100.0
WP_001185585.1\|2734955_2735471_-	hypothetical protein	A0A0N7IRG3	Acinetobacter_phage	2.5e-77	96.6
WP_000094278.1\|2735540_2736458_-	hypothetical protein	J7HXP7	Acinetobacter_phage	2.0e-170	100.0
WP_000002408.1\|2736510_2737689_-	hypothetical protein	A0A0D4DCQ4	Acinetobacter_phage	1.2e-103	66.3
WP_000064593.1\|2737688_2738042_-	hypothetical protein	A0A0D4DCF7	Acinetobacter_phage	3.3e-57	96.6
WP_000749909.1\|2738138_2738660_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_001277696.1\|2738768_2738987_-	hypothetical protein	A0A0P0I8C2	Acinetobacter_phage	1.2e-28	94.2
WP_001984404.1\|2738988_2739432_-	hypothetical protein	A0A0D4DBX3	Acinetobacter_phage	2.0e-75	94.6
WP_000539749.1\|2739388_2739757_-	hypothetical protein	A0A0D4DBN1	Acinetobacter_phage	2.0e-52	82.8
WP_000248411.1\|2739728_2740139_-	hypothetical protein	A0A0P0IKR8	Acinetobacter_phage	7.7e-50	73.3
WP_000235282.1\|2740190_2740484_-	hypothetical protein	NA	NA	NA	NA
WP_000540685.1\|2740491_2740689_-	hypothetical protein	NA	NA	NA	NA
WP_000524257.1\|2740757_2741126_-	hypothetical protein	J7I467	Acinetobacter_phage	8.7e-61	92.6
WP_000008459.1\|2741126_2741507_-	hypothetical protein	A0A0P0IVQ3	Acinetobacter_phage	6.9e-53	84.9
WP_000524488.1\|2741510_2741846_-	hypothetical protein	A0A0N7IRE4	Acinetobacter_phage	2.7e-53	100.0
WP_000852265.1\|2741890_2742841_-	hypothetical protein	A0A0P0HSG2	Acinetobacter_phage	3.7e-172	94.9
WP_000056390.1\|2742854_2743646_-	hypothetical protein	A0A0P0J090	Acinetobacter_phage	2.3e-90	74.2
WP_000589038.1\|2743732_2744047_-	hypothetical protein	A0A0S3UFT8	Pseudomonas_phage	5.2e-14	50.5
WP_001291451.1\|2744098_2744251_-	hypothetical protein	NA	NA	NA	NA
WP_000004550.1\|2744266_2744497_-	hypothetical protein	NA	NA	NA	NA
WP_000146970.1\|2744493_2745600_-\|capsid	minor capsid protein	A0A0P0IR98	Acinetobacter_phage	2.1e-190	90.2
WP_000301495.1\|2745609_2746950_-	DUF4055 domain-containing protein	A0A0P0IDW1	Acinetobacter_phage	3.4e-235	92.2
WP_001132930.1\|2746989_2748282_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	6.4e-215	86.0
WP_000729387.1\|2748241_2748757_-	DUF2280 domain-containing protein	A0A1B1P9C2	Acinetobacter_phage	3.2e-45	61.3
WP_000435230.1\|2748815_2749457_-	hypothetical protein	A0A0D4DBV4	Acinetobacter_phage	6.3e-115	88.7
WP_000378523.1\|2749425_2749860_-	hypothetical protein	A0A0P0IVP9	Acinetobacter_phage	7.4e-67	84.7
WP_001136773.1\|2749920_2750376_-	hypothetical protein	A0A0P0HSF5	Acinetobacter_phage	2.7e-80	95.4

DBSCAN-SWA_6

2754333 : 2766681

Acinetobacter_phage(95.65%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001277128.1\|2754333_2754810_-	hypothetical protein	A0A2H4J548	uncultured_Caudovirales_phage	1.2e-25	40.3
WP_000100162.1\|2754806_2755208_-	DUF559 domain-containing protein	A0A0P0I8E8	Acinetobacter_phage	2.6e-66	96.2
WP_000462878.1\|2755207_2755600_-	hypothetical protein	J7HXM5	Acinetobacter_phage	1.2e-07	57.8
WP_000647826.1\|2755592_2755931_-	hypothetical protein	A0A0P0IKW4	Acinetobacter_phage	1.1e-30	56.3
WP_001003671.1\|2755927_2756728_-	hypothetical protein	A0A0P0IDV1	Acinetobacter_phage	2.8e-144	95.5
WP_000064627.1\|2756730_2757612_-	replication protein	A0A0P0IKQ2	Acinetobacter_phage	3.3e-138	95.2
WP_000602535.1\|2757604_2757829_-	hypothetical protein	A0A0P0I444	Acinetobacter_phage	3.2e-34	97.3
WP_001180660.1\|2757900_2758173_-	hypothetical protein	J7I0V3	Acinetobacter_phage	7.2e-36	90.0
WP_000048916.1\|2758234_2758555_-	hypothetical protein	A0A0P0HSE9	Acinetobacter_phage	1.2e-42	87.7
WP_000703023.1\|2758565_2758754_-	hypothetical protein	NA	NA	NA	NA
WP_000052252.1\|2758858_2759611_+	LexA family transcriptional regulator	J7I4M9	Acinetobacter_phage	5.5e-102	74.3
WP_000370485.1\|2759625_2759841_+	hypothetical protein	A0A0P0IKK4	Acinetobacter_phage	9.4e-31	98.6
WP_000048052.1\|2759892_2760900_+	hypothetical protein	A0A0P0IY33	Acinetobacter_phage	2.9e-183	100.0
WP_001129676.1\|2760901_2761405_+	hypothetical protein	A0A0P0I896	Acinetobacter_phage	1.1e-77	100.0
WP_000845537.1\|2761543_2761747_+	hypothetical protein	A0A0P0IKZ8	Acinetobacter_phage	1.2e-27	100.0
WP_000051960.1\|2761753_2761996_-	hypothetical protein	A0A0P0I4B0	Acinetobacter_phage	5.2e-38	100.0
WP_001101038.1\|2762189_2762633_+	hypothetical protein	A0A0N7IRF7	Acinetobacter_phage	1.7e-71	94.5
WP_000656405.1\|2762632_2762923_+	hypothetical protein	A0A0P0IDU2	Acinetobacter_phage	5.1e-48	95.8
WP_000064463.1\|2762915_2763239_+	hypothetical protein	A0A0D4DCB5	Acinetobacter_phage	4.8e-55	95.3
WP_001207474.1\|2763250_2764372_+	ATP-binding protein	A0A0N7IRE0	Acinetobacter_phage	2.8e-211	99.5
WP_000698529.1\|2764368_2765301_+	hypothetical protein	A0A0P0I438	Acinetobacter_phage	2.2e-137	80.0
WP_000654846.1\|2765302_2765554_+	hypothetical protein	A0A0P0IVN4	Acinetobacter_phage	6.4e-39	100.0
WP_000147323.1\|2765554_2765962_+	hypothetical protein	A0A0P0IRG7	Acinetobacter_phage	7.5e-13	52.2
WP_000004579.1\|2765958_2766681_+	hypothetical protein	A0A0P0HSE1	Acinetobacter_phage	1.7e-55	88.2

DBSCAN-SWA_7

2987002 : 2995099

Acinetobacter_phage(57.14%)

integrase

attL 2987847:2987861|attR 2999758:2999772

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001260065.1\|2987002_2987374_+	hypothetical protein	A0A0D4DCB5	Acinetobacter_phage	1.4e-10	40.6
WP_000643997.1\|2987544_2988225_+	DNA polymerase III subunit epsilon	NA	NA	NA	NA
2987847:2987861	attL	NA	NA	NA	NA
WP_000805204.1\|2988237_2989266_+	ead/Ea22-like family protein	A0A2I7QY11	Vibrio_phage	3.8e-13	29.0
WP_000986115.1\|2989406_2989697_+	hypothetical protein	NA	NA	NA	NA
WP_000464381.1\|2989697_2989877_+	hypothetical protein	NA	NA	NA	NA
WP_000609004.1\|2989869_2990406_+	hypothetical protein	NA	NA	NA	NA
WP_000578497.1\|2990402_2990912_+	phage protein	A0A0P0I8H3	Acinetobacter_phage	1.6e-33	87.8
WP_000028957.1\|2990908_2991118_+	hypothetical protein	A0A0P0IRG7	Acinetobacter_phage	6.3e-32	94.2
WP_001292077.1\|2991114_2991330_+	hypothetical protein	I2GUB6	Acinetobacter_phage	8.5e-32	92.9
WP_000119264.1\|2991330_2991501_+	hypothetical protein	A0A2H4JBW6	uncultured_Caudovirales_phage	2.4e-13	69.2
WP_000527288.1\|2991507_2992500_-	FRG domain-containing protein	NA	NA	NA	NA
WP_000549863.1\|2992614_2993070_-	hypothetical protein	NA	NA	NA	NA
WP_001076477.1\|2993060_2993945_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000947475.1\|2993941_2995099_-\|integrase	site-specific integrase	A0A2H4J339	uncultured_Caudovirales_phage	4.9e-134	63.0
2999758:2999772	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3660743 : 3718292

Staphylococcus_phage(15.38%)

integrase,transposase,tRNA

attL 3700149:3700208|attR 3725363:3727554

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000216739.1\|3660743_3661676_+\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_000907680.1\|3661725_3662922_-	putative lipid II flippase FtsW	NA	NA	NA	NA
WP_000908243.1\|3662946_3664293_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_000942498.1\|3664453_3664705_-	hypothetical protein	NA	NA	NA	NA
WP_001278225.1\|3664725_3666579_-	ferrous iron transporter B	NA	NA	NA	NA
WP_001991212.1\|3666575_3666839_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_000608730.1\|3666982_3667903_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	6.7e-33	30.7
WP_000011159.1\|3668049_3668865_+	DsbC family protein	NA	NA	NA	NA
WP_000805827.1\|3669109_3670411_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_000063593.1\|3670466_3671606_+	threonine synthase	NA	NA	NA	NA
WP_003384760.1\|3671712_3672759_-	D-alanyl-D-alanine endopeptidase PBP7/8	NA	NA	NA	NA
WP_000633799.1\|3672971_3673607_+	response regulator	NA	NA	NA	NA
WP_002001070.1\|3673662_3675186_+	PAS domain-containing sensor histidine kinase	A0A1V0SGX0	Hokovirus	2.3e-06	26.3
WP_000840549.1\|3675210_3676632_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_000942504.1\|3676635_3677820_-	peptidase S41	A0A0R6PIZ1	Moraxella_phage	8.3e-12	23.0
WP_000128749.1\|3677835_3679383_-	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_000881094.1\|3679508_3680579_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_000586912.1\|3680578_3681679_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_000673449.1\|3681822_3683271_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	5.5e-50	36.4
WP_073545233.1\|3683263_3683695_+	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_001988710.1\|3683708_3684347_+	hypothetical protein	NA	NA	NA	NA
WP_000354154.1\|3684477_3684696_+	hypothetical protein	NA	NA	NA	NA
WP_000493866.1\|3684755_3685415_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.5e-34	38.6
WP_001083669.1\|3685457_3686750_-	DNA adenine methylase	A0A0P0BWH0	Ostreococcus_mediterraneus_virus	2.5e-38	32.6
WP_001292506.1\|3686746_3687832_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	5.1e-48	36.6
WP_000543541.1\|3687847_3688306_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_000738520.1\|3688463_3689861_-	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	5.4e-34	31.2
WP_000780326.1\|3689918_3690257_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_000894500.1\|3690536_3690764_+	accessory factor UbiK family protein	NA	NA	NA	NA
WP_001144971.1\|3691767_3693555_+	hypothetical protein	NA	NA	NA	NA
WP_001082319.1\|3693937_3694741_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|3694740_3695577_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_000743213.1\|3695696_3695921_+	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|3696131_3697625_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000512977.1\|3697862_3698267_+	hypothetical protein	NA	NA	NA	NA
WP_000088605.1\|3698244_3698868_-	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_001089073.1\|3698949_3700167_+	tetracycline efflux MFS transporter Tet(B)	A0A2H4UVM2	Bodo_saltans_virus	3.0e-09	24.4
3700149:3700208	attL	NA	NA	NA	NA
WP_001144964.1\|3700249_3702046_+	hypothetical protein	NA	NA	NA	NA
WP_000953322.1\|3702340_3703828_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	8.3e-219	79.4
WP_000034564.1\|3703840_3704692_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	8.2e-70	45.9
WP_001095006.1\|3704759_3705059_+	hypothetical protein	NA	NA	NA	NA
WP_000529372.1\|3705131_3705503_+	hypothetical protein	NA	NA	NA	NA
WP_085940413.1\|3706193_3707283_+\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_000081835.1\|3708489_3709605_-	TniQ family protein	NA	NA	NA	NA
WP_000417085.1\|3709634_3710555_-	TniB family NTP-binding protein	NA	NA	NA	NA
WP_020752341.1\|3710559_3712470_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_020752340.1\|3712470_3713181_-\|transposase	heteromeric transposase endonuclease subunit TnsA	I6WI48	Vibriophage	4.1e-06	29.3
WP_071543477.1\|3713385_3713679_+	hypothetical protein	NA	NA	NA	NA
WP_000251875.1\|3713572_3713875_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_001043260.1\|3713961_3714777_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_085940413.1\|3714869_3715959_+\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_000573066.1\|3716381_3718292_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
3725363:3727554	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage