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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017763 Bacillus subtilis strain 29R7-12 chromosome, complete genome 1 crisprs cas3,DinG,csa3,WYL,DEDDh 0 0 17 0
NZ_CP017764 Bacillus subtilis strain 29R7-12 plasmid unnamed1, complete sequence 1 crisprs NA 0 1 0 0
NZ_CP017765 Bacillus subtilis strain 29R7-12 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP017763
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017763_1 1365660-1365765 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 49938 : 56033 8 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_2 268471 : 294614 29 Bacillus_phage(60.0%) transposase,holin NA
DBSCAN-SWA_3 369439 : 462308 103 Bacillus_phage(55.32%) coat,transposase,tail,head,protease,holin,integrase,plate,portal,terminase,capsid attL 419851:419866|attR 463697:463712
DBSCAN-SWA_4 467008 : 473580 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_5 912640 : 958567 55 uncultured_Caudovirales_phage(30.56%) transposase,protease,holin,plate,portal,terminase NA
DBSCAN-SWA_6 995867 : 1044038 52 Bacillus_phage(55.56%) coat,transposase,tRNA NA
DBSCAN-SWA_7 1479914 : 1541704 51 uncultured_Caudovirales_phage(22.22%) coat,transposase NA
DBSCAN-SWA_8 1585436 : 1593802 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_9 2345160 : 2442903 89 Bacillus_phage(23.81%) coat,protease,transposase,holin NA
DBSCAN-SWA_10 2567043 : 2626173 55 Bacillus_phage(28.57%) coat,transposase,protease,holin,tRNA,lysis NA
DBSCAN-SWA_11 2629661 : 2685185 56 Enterobacteria_phage(20.0%) bacteriocin,coat,protease,tRNA NA
DBSCAN-SWA_12 2981039 : 3017483 48 Bacillus_phage(34.62%) tail,integrase,plate,portal,terminase attL 2980793:2980846|attR 3017622:3017675
DBSCAN-SWA_13 3091815 : 3099550 9 Organic_Lake_phycodnavirus(100.0%) holin NA
DBSCAN-SWA_14 3111566 : 3119931 18 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_15 3123615 : 3147637 28 Bacillus_phage(100.0%) tail,head,protease,holin,portal,terminase,capsid NA
DBSCAN-SWA_16 3293792 : 3326295 38 Bacillus_phage(33.33%) coat,transposase,tail,protease,integrase attL 3308544:3308558|attR 3320789:3320803
DBSCAN-SWA_17 3690805 : 3763126 60 Staphylococcus_phage(20.0%) coat,transposase,protease,tRNA,integrase attL 3720481:3720535|attR 3731881:3731935
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP017764
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017764_1 37897-38065 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP018185 Bacillus subtilis strain KH2 plasmid, complete sequence 60755-60813 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP017764 Bacillus subtilis strain 29R7-12 plasmid unnamed1, complete sequence 37952-38010 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP032868 Bacillus subtilis subsp. subtilis strain N4-2 plasmid unnamed1, complete sequence 33414-33472 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP032864 Bacillus subtilis subsp. subtilis strain N2-2 plasmid unnamed1, complete sequence 47417-47475 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP032866 Bacillus subtilis subsp. subtilis strain N3-1 plasmid unnamed1, complete sequence 31651-31709 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP021893 Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence 5175-5233 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP021893 Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence 71103-71161 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP041370 Bacillus sp. M4U3P1 plasmid unnamed1, complete sequence 57654-57712 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP020024 Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence 20251-20309 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP020024 Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence 84850-84908 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP032862 Bacillus subtilis subsp. subtilis strain N1-1 plasmid unnamed1, complete sequence 1870-1928 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NC_015148 Bacillus subtilis subsp. natto plasmid pLS20 DNA, complete sequence, strain: IFO 3335 60682-60740 0 1.0
NZ_CP017764_1 1.1|37952|59|NZ_CP017764|CRISPRCasFinder 37952-38010 59 NZ_CP014473 Bacillus subtilis subsp. natto strain CGMCC 2108 plasmid unnamed2, complete sequence 60682-60740 0 1.0

1. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP018185 (Bacillus subtilis strain KH2 plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

2. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP017764 (Bacillus subtilis strain 29R7-12 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

3. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP032868 (Bacillus subtilis subsp. subtilis strain N4-2 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

4. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP032864 (Bacillus subtilis subsp. subtilis strain N2-2 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

5. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP032866 (Bacillus subtilis subsp. subtilis strain N3-1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

6. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP021893 (Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

7. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP021893 (Bacillus subtilis subsp. subtilis strain SRCM100333 plasmid pBS333 sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

8. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP041370 (Bacillus sp. M4U3P1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

9. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP020024 (Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

10. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP020024 (Bacillus subtilis strain ATCC 21228 plasmid pLDW-15, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

11. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP032862 (Bacillus subtilis subsp. subtilis strain N1-1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

12. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NC_015148 (Bacillus subtilis subsp. natto plasmid pLS20 DNA, complete sequence, strain: IFO 3335) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

13. spacer 1.1|37952|59|NZ_CP017764|CRISPRCasFinder matches to NZ_CP014473 (Bacillus subtilis subsp. natto strain CGMCC 2108 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	CRISPR spacer
tgcgacttgtcgtgatgtggcagctgaagaaagagatcgatgccaggcatccaggagcg	Protospacer
***********************************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage