CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP018677	Acinetobacter baumannii strain LAC4 chromosome, complete genome	3 crisprs	csa3,WYL,DEDDh,cas3	11
NZ_CP018678	Acinetobacter baumannii strain LAC4 plasmid pALAC4-1, complete sequence	0 crisprs	NA	0
NZ_CP018679	Acinetobacter baumannii strain LAC4 plasmid pALAC4-2, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018677_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018677_1

1563439-1563583

Orphan

Consensus_repeat	Method
CTAAAGCTTTGGCGAAGCGCAAGATGAACATAGTTATGGTTAATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018677_1

>merge|NZ_CP018677|1|1563439-1563583|CRISPRCasFinder
CTAAAGCTTTGGCGAAGCGCAAGATGAACATAGTTATGGTTAATTTGTATTGAACTTTTTACAGGTATAAAAAAACGCCACCTGAGCAAGACAAAGCGGCTAAAGCTTTGGCGAAGCGCGAGATGAACATAGTTATGGTTAATTT

>NZ_CP018677|1|1|1563439-1563583|CRISPRCasFinder
CTAAAGCTTTGGCGAAGCGCAAGATGAACATAGTTATGGTTAATTT	GTATTGAACTTTTTACAGGTATAAAAAAACGCCACCTGAGCAAGACAAAGCGG
CTAAAGCTTTGGCGAAGCGCGAGATGAACATAGTTATGGTTAATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018677.1\|WP_000270276.1\|1568674_1568776_-\|cytochrome-bd-I-oxidase-subunit-CydX	unknown	unknown	gnl\|CDD\|369733
NZ_CP018677.1\|WP_000949688.1\|1555291_1555537_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018677.1\|WP_000575163.1\|1568789_1569935_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|129307
NZ_CP018677.1\|WP_000175351.1\|1567093_1567765_+\|DUF2057-domain-containing-protein	unknown	unknown	gnl\|CDD\|378258
NZ_CP018677.1\|WP_000838061.1\|1555796_1556216_-\|heme-binding-protein	unknown	unknown	gnl\|CDD\|225734
NZ_CP018677.1\|WP_000616034.1\|1563633_1563867_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018677.1\|WP_000954523.1\|1558907_1559810_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176162
NZ_CP018677.1\|WP_000129939.1\|1560992_1562201_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235056
NZ_CP018677.1\|WP_001187342.1\|1564976_1566083_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP018677.1\|WP_000102943.1\|1566271_1566868_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|226090
NZ_CP018677.1\|WP_000156920.1\|1562251_1562683_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341391
NZ_CP018677.1\|WP_000955081.1\|1564542_1564869_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018677.1\|WP_085916945.1\|1568374_1568674_-\|cyd-operon-YbgE-family-protein	unknown	unknown	gnl\|CDD\|370577
NZ_CP018677.1\|WP_077163451.1\|1562823_1563156_-\|DUF2750-domain-containing-protein	unknown	unknown	gnl\|CDD\|378546
NZ_CP018677.1\|WP_000138830.1\|1560423_1560765_-\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|188046
NZ_CP018677.1\|WP_001202783.1\|1558061_1558856_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP018677.1\|WP_000121851.1\|1560053_1560377_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273177
NZ_CP018677.1\|WP_000185571.1\|1564082_1564442_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018677.1\|WP_000593796.1\|1567837_1568362_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP018677.1\|WP_001186687.1\|1556407_1557709_-\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|185331

Protein	Function_ID	Function_description	E-value
NZ_CP018677.1\|WP_000270276.1\|1568674_1568776_-\|cytochrome-bd-I-oxidase-subunit-CydX	gnl\|CDD\|369733	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein. This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in E. coli. Members have a consensus motif (MWYFXW) which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to Proteobacteria.	2.3152e-06
NZ_CP018677.1\|WP_000575163.1\|1568789_1569935_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|129307	TIGR00203, ubiquinol_oxidase_subunit_2, cytochrome d oxidase, subunit II (cydB). part of a two component cytochrome D terminal complex. Terminal reaction in the aerobic respiratory chain. [Energy metabolism, Electron transport].	3.94189e-149
NZ_CP018677.1\|WP_000838061.1\|1555796_1556216_-\|heme-binding-protein	gnl\|CDD\|225734	COG3193, GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol [General function prediction only].	2.71548e-31
NZ_CP018677.1\|WP_000954523.1\|1558907_1559810_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176162	cd08473, PBP2_CrgA_like_4, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 4. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.44498e-97
NZ_CP018677.1\|WP_000129939.1\|1560992_1562201_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235056	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.	0
NZ_CP018677.1\|WP_001187342.1\|1564976_1566083_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	8.49853e-180
NZ_CP018677.1\|WP_000102943.1\|1566271_1566868_+\|nitroreductase-family-protein	gnl\|CDD\|226090	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only].	1.21707e-108
NZ_CP018677.1\|WP_000156920.1\|1562251_1562683_-\|CBS-domain-containing-protein	gnl\|CDD\|341391	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.93176e-56
NZ_CP018677.1\|WP_085916945.1\|1568374_1568674_-\|cyd-operon-YbgE-family-protein	gnl\|CDD\|370577	pfam09600, Cyd_oper_YbgE, Cyd operon protein YbgE (Cyd_oper_YbgE). This entry describes a small protein of unknown function, about 100 amino acids in length, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It appears to be an integral membrane protein. It is found so far only in the Proteobacteria.	3.65946e-19
NZ_CP018677.1\|WP_077163451.1\|1562823_1563156_-\|DUF2750-domain-containing-protein	gnl\|CDD\|378546	pfam11042, DUF2750, Protein of unknown function (DUF2750). This family is conserved in Proteobacteria. The function is not known.	1.42209e-20
NZ_CP018677.1\|WP_000138830.1\|1560423_1560765_-\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	2.75898e-66
NZ_CP018677.1\|WP_001202783.1\|1558061_1558856_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	4.40373e-150
NZ_CP018677.1\|WP_000121851.1\|1560053_1560377_+\|hypothetical-protein	gnl\|CDD\|273177	TIGR00617, Replication_protein_A_70_kDa_DNA-binding_subunit, replication factor-a protein 1 (rpa1). All proteins in this family for which functions are known are part of a multiprotein complex made up of homologs of RPA1, RPA2 and RPA3 that bind ssDNA and function in the recognition of DNA damage for nucleotide excision repairThis family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0.00742828
NZ_CP018677.1\|WP_000175351.1\|1567093_1567765_+\|DUF2057-domain-containing-protein	gnl\|CDD\|378258	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057). This domain, found in various prokaryotic proteins, has no known function.	4.46817e-29
NZ_CP018677.1\|WP_000593796.1\|1567837_1568362_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.08011e-05
NZ_CP018677.1\|WP_001186687.1\|1556407_1557709_-\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	2.27982e-171

>NZ_CP018677.1|WP_077163451.1|1562823_1563156_-|DUF2750-domain-containing-protein
MIKIYILRTMMYCGVLWGLFDEGWAIKSDQEDFIFPFWLNGVQAHRYAKTHWPNYKPRKITPKDFHESLLPTLTRLKVTPALFNSSHRKLKLSTQQMHHFFFNHPKWQVA
>NZ_CP018677.1|WP_000156920.1|1562251_1562683_-|CBS-domain-containing-protein
MTIVAQVIKNKSEQAIFTISPEATVLEAITIMAEKGIGALVVAEGEQVVGILSERDYTRKVTLMERSSYSTTVAEIMTAKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKLVGFISIGDLVKAAMEDQKVLIEQLKQYISG
>NZ_CP018677.1|WP_000129939.1|1560992_1562201_+|aspartate-aminotransferase-family-protein
MTDITLAPVQPDQPTHLMATYGRQAISFVRGRGAYLYAQDGTEYLDALTGIAVCGLGHAHPAIAEAIAEQAATLVHTSNLFEIPWQTAAAQKLAEVSGMEEIFFSNSGAESNEGAIKIARKFGTQQGISLPKIIVAEQSFHGRTLATLSATGNKKVQDGFAPLVEGFIRVPFGDIEAIQEAALQHPDIVAILIEPIQGEGGINTAPQGFSYLEEVRQNCNQHNWLMMLDEIQTGNGRTGKYFAYQHTNIIPDVLTTAKGLGNGFPVGAVMTQGKAVGLLGPGSHGSTYGGTVLGSRVVYTVIDTIQKENAVENAAVVGNYIVDQLRAQLSDKNVQVRGFGMMIGIQLPKDCAELVAIARDEYKLIINVTAGSVVRLLPPINMTQAQADILLERLVALITNYL
>NZ_CP018677.1|WP_000138830.1|1560423_1560765_-|Grx4-family-monothiol-glutaredoxin
MTEQARDTEALIRDQIAKHPVLLYMKGTPQFPQCGFSARAVEALSQIGRPFAYVNILENPDIRATLPKIANWPTFPQLWVNGELIGGSDIMLEMFQNGELKPLIEQYSAAPEA
>NZ_CP018677.1|WP_000121851.1|1560053_1560377_+|hypothetical-protein
MSYQLVELENATANIICPICKLAVIDWTQEQYVQPCEHTVFIAMDLGFEFVADRFEQVMNQNVDELHEDPNMNIFDAITTTPYKNLTILKADLGVDGLFRYVGISVC
>NZ_CP018677.1|WP_000954523.1|1558907_1559810_-|LysR-family-transcriptional-regulator
MLTDLDDFYCFALVVEHGGFSAAERVTDIPKSKLSRRVYNLEENLGVRLIQRSSRHFAVTDIGMDIYRHAQVMMNAAQAAHDLVDHLSIQPRGVVKVSVPVDIAQNQLPKILPAFLKKYPEIRLQLIVSNRRVDVINEGIDIALRVRSKLDDDPSLVLRQFALIEQSLFASQAYLNEFGNIKSPDELSDHRILSLSEEHLDQQFILHGPDNQLKKVKVSPTIMGTNIYMLAQLASQNCGIALLPDTAAEDFVKSGQLVQILPDWKAAHGIFHAVYPSRRGLLPAVRVFIDYLVEHLSEHP
>NZ_CP018677.1|WP_001202783.1|1558061_1558856_+|type-I-methionyl-aminopeptidase
MRASTVTIKTEQDLEKLRVSGRLAAQVLEMIGEYVKPGVTTEYLDNICNDYIVNTLKVIPANVGYHGFTKTICTSVNEVVCHGIPSQNKILKDGDIINIDVAIIKDGYFGDTSRMYYVGNVNPHAKKLVETTYEAMVAGIHVVKPGATLGDIGYAIQSVAHREGYSIVREYCGHGIGKVYHEQPNILHYGQRGQGLVLKKGMVFTIEPMVNAGKPQVKELNDGWTVITQDHSLSAQWEHMVAVTDTGFELLTPWPEGVGNYPEI
>NZ_CP018677.1|WP_001186687.1|1556407_1557709_-|branched-chain-amino-acid-transport-system-II-carrier-protein
MQQLRTGDIIALGFMTFALFIGAGNIIFPPIVAQQAGDHVWLAAIGFLITAVGLPVITIMALSRMQGSIEIISSPLGRIASLILTVVCYLSVGPLFATPRTATVSYEIGFSSYFGTSSSSLLIYSAIYFAFVTVVSLYPNKLLDTVGHVLAPLKIIALAILGIAAVMIPAGYVPTPINHYVNSPVSEGFVNGYLTMDTLGALVFGIVIIQAIYSRGVTDNKLVTKYAIIASLISGVGLTLVYLSLFKLGLGSHEVAPNAANGAVILHAYVQHAFGNMGSLFLTGLIFLACMVTAIGLTCACAEYFAQLTKLPYKLLVFILVGFSFIISNLGLTKLIAVSVPVLSAIYPPAIVVIMLSFFWKFWHKPSFIVGSVTSIALIFGIIDGLKVAGFGDYLPNFLQHLPLNEQNLAWLIPSLVVLVVTTLIDKVKHKSI
>NZ_CP018677.1|WP_000838061.1|1555796_1556216_-|heme-binding-protein
MKSKYYLTLADAEFLMEEAQKYAIEHNFKVSIAIVDETSSLLLMKRLDGASPLTTHLCLEKAKCSSMSGRPSKFYEELLQNGRLGFLSMPSAKGMLEGGKAIIYEGQILGAIGVSGVQSFEDAEIAQHAIDVFLKKQCS
>NZ_CP018677.1|WP_000949688.1|1555291_1555537_-|hypothetical-protein
MLSLHFNKQVFINTLNSKDSVVYGVTTLALMLTLLFQGMIKGNLKPEYFMYAMVVSFVFCVWAFVDHKMRKLAKRRLSQQK
>NZ_CP018677.1|WP_000616034.1|1563633_1563867_-|hypothetical-protein
MIQRISHHDLEHVYATAVNTIQSQMNFQDAVAQLEEVARAGHGKAALFLAELYYQGFRVERDSMKAQYWQKLATMQA
>NZ_CP018677.1|WP_000185571.1|1564082_1564442_+|hypothetical-protein
MTNTIDGFVFDNPPKEEQIIELAHYHRKLLDEAIFHQEIHLGDYCLAQRKRVFDYARQLDPNQKAWFYQVYDGELRKIADEDELHPADAEEGLSIFAMLLVLVIIAAILYFSVIRSLMG
>NZ_CP018677.1|WP_000955081.1|1564542_1564869_+|hypothetical-protein
MLTFKENFLKLKSELKADQCFNLVVIIIIGCIFMLSYLALLGPVNSEQYQRIVQLSRQATYPRTQDMAELIMAQSEIHRAEYLKLMHAYQFEHNHIKQYPALAQEDTQ
>NZ_CP018677.1|WP_001187342.1|1564976_1566083_+|signal-recognition-particle-docking-protein-FtsY
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFTDGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDPNKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFESARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLDGTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
>NZ_CP018677.1|WP_000102943.1|1566271_1566868_+|nitroreductase-family-protein
MSTFLDKIKNRRTIYAIGKNVALDRTKIEETIREAVKHSPSAFNSQSSRVVTLYGESHAKFWNLVREALRKIVPADAFAGTNAKIDSFVAGVGTVLFYEDQAVVKSLQEQFELYADNFPVWSEHSSAIAQFATWTALSELGLGASLQHYNPIVDADAAEAFDVPATWKLRAQLVFGSVEAPAGEKAFISDEDRFKTFN
>NZ_CP018677.1|WP_000175351.1|1567093_1567765_+|DUF2057-domain-containing-protein
MTLRLSVAAMGLLLSGSVFSAVTITAPEEIVILAVNGQEVNSGLFRSSKNNYKVDAGETSLSVRYQEYFEHLSGEHDIVKSGVVTIQTPALKDGQTYKLAMVDAPKQFEQAKKYAEQPTVALYNSNNELIVQQTGANNEARPWFASGLLGKVTDFTTKSSKQQPDAVYAVAKPTTTQANAPVATTMPPTGVAQTNDQRLAEIWKKSSKAERQKFMAWLAEQSN
>NZ_CP018677.1|WP_000593796.1|1567837_1568362_+|GNAT-family-N-acetyltransferase
MIKLNFRLAEFSDIPTLVELINQSYREQQGRSWTTEVEYVKGQRINKEQLKHQLELPNSVLLIGEIDSSKVVTCIGLTFQSNTVEIGTFCTDPHVQNMKIGRCVLEYAEQFALHKVPELDSAIMYVLNVRSELIAYYERRGYIKTGNHEPYPLDANVGLPLIPIKLIEMKKDLK
>NZ_CP018677.1|WP_085916945.1|1568374_1568674_-|cyd-operon-YbgE-family-protein
MMATAMTASNQRKAQAFAMAISFLLALPLAVILLVHPSLMLDANGHYNHSQLMLVMVGISGGFIYGVGFVPHFWLWKWLFSPWIAWPLMLLGYYIWFLT
>NZ_CP018677.1|WP_000270276.1|1568674_1568776_-|cytochrome-bd-I-oxidase-subunit-CydX
MWYFAWILGILMACFAGVLSALYIEHHQNLDEE
>NZ_CP018677.1|WP_000575163.1|1568789_1569935_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MIEYELLKIIWWVLVGVLLIGFALTDGFDMGSMALMPFVGKTDNERRAAINTIAPHWDGNQVWFITAGGALFAAWPMVYSVAFSGMYWALLLVLFALFLRPVGFDYRSKLENTQWRNSWDWGLCIGGAVPALVFGVAFGNLFLGIPFSLDSTLRSEYSGSFFALLNPFALVCGIVSLSMLCAHGGAWLMLRTDGALKQRSAKATQIMAAIFLVCFLVIGAWLYFGQVPGYSYAAAVDPNAALNPLAKEVVTNNNPGWMNNYSSYPITKVAPVLAILGAIIAFFTASKAKAGLSFAGTSLMIVGAILTAGFALFPFLLPSSVNPNSSLTMWDAVSSHRTLGVMTVAACIFVPIILIYTSWSYYKMWGVITNKHIESNSHSLY

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Crispr_ID: NZ_CP018677_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018677_2

1836688-1836789

Orphan

Consensus_repeat	Method
CAAACCATTGCTTTGTTTATCCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018677_2

>merge|NZ_CP018677|2|1836688-1836789|CRISPRCasFinder
CAAACCATTGCTTTGTTTATCCTCTTCCACTCGAACATAGTTCTCGTCTTCTTGCGAAGCTTTAGTCGCTTCTCAGGACAAAGCATTGCTTTGTTTATCCTC

>NZ_CP018677|2|2|1836688-1836789|CRISPRCasFinder
CAAACCATTGCTTTGTTTATCCTC	TTCCACTCGAACATAGTTCTCGTCTTCTTGCGAAGCTTTAGTCGCTTCTCAGGA
CAAAGCATTGCTTTGTTTATCCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018677.1\|WP_000771644.1\|1831614_1832223_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|234675
NZ_CP018677.1\|WP_000331400.1\|1832710_1833565_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
NZ_CP018677.1\|WP_000822394.1\|1834681_1835686_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|168683
NZ_CP018677.1\|WP_001023744.1\|1833731_1834649_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP018677.1\|WP_000925651.1\|1835795_1836587_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP018677.1\|WP_004835232.1\|1832318_1832714_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP018677.1\|WP_001289733.1\|1844947_1846483_-\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|273567
NZ_CP018677.1\|WP_001096433.1\|1839333_1840605_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP018677.1\|WP_000364551.1\|1848844_1849831_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|237261
NZ_CP018677.1\|WP_000238436.1\|1842721_1843507_-\|acetoin-reductase	unknown	unknown	gnl\|CDD\|187624
NZ_CP018677.1\|WP_032002782.1\|1840674_1841586_+\|bestrophin	unknown	unknown	gnl\|CDD\|376448
NZ_CP018677.1\|WP_000642319.1\|1841633_1842692_-\|2,3-butanediol-dehydrogenase	unknown	unknown	gnl\|CDD\|176195
NZ_CP018677.1\|WP_001186401.1\|1830181_1831531_+\|chromate-efflux-transporter	unknown	unknown	gnl\|CDD\|273350
NZ_CP018677.1\|WP_001133053.1\|1846484_1847504_-\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NZ_CP018677.1\|WP_001177517.1\|1847517_1848480_-\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|238958
NZ_CP018677.1\|WP_000465452.1\|1838446_1839142_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_CP018677.1\|WP_000080821.1\|1829196_1829940_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP018677.1\|WP_001271394.1\|1843533_1844937_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235798
NZ_CP018677.1\|WP_000448778.1\|1827434_1829168_-\|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181346
NZ_CP018677.1\|WP_000864074.1\|1827168_1827414_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|224069

Protein	Function_ID	Function_description	E-value
NZ_CP018677.1\|WP_000771644.1\|1831614_1832223_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|234675	PRK00170, PRK00170, azoreductase; Reviewed.	5.24919e-86
NZ_CP018677.1\|WP_000331400.1\|1832710_1833565_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	4.38745e-34
NZ_CP018677.1\|WP_000822394.1\|1834681_1835686_-\|hypothetical-protein	gnl\|CDD\|168683	PRK06813, PRK06813, homoserine dehydrogenase; Validated.	7.04313e-77
NZ_CP018677.1\|WP_001023744.1\|1833731_1834649_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	4.54094e-15
NZ_CP018677.1\|WP_000925651.1\|1835795_1836587_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	9.27594e-23
NZ_CP018677.1\|WP_004835232.1\|1832318_1832714_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	9.44811e-39
NZ_CP018677.1\|WP_001289733.1\|1844947_1846483_-\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|273567	TIGR01349, PDHac_trf_mito, pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score. [Energy metabolism, Pyruvate dehydrogenase].	3.67023e-121
NZ_CP018677.1\|WP_001096433.1\|1839333_1840605_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	5.80166e-122
NZ_CP018677.1\|WP_000364551.1\|1848844_1849831_+\|lipoyl-synthase	gnl\|CDD\|237261	PRK12928, PRK12928, lipoyl synthase; Provisional.	0
NZ_CP018677.1\|WP_000238436.1\|1842721_1843507_-\|acetoin-reductase	gnl\|CDD\|187624	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs. 2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.14898e-114
NZ_CP018677.1\|WP_032002782.1\|1840674_1841586_+\|bestrophin	gnl\|CDD\|376448	pfam01062, Bestrophin, Bestrophin, RFP-TM, chloride channel. Bestrophin is a 68-kDa basolateral plasma membrane protein expressed in retinal pigment epithelial cells (RPE). It is encoded by the VMD2 gene, which is mutated in Best macular dystrophy, a disease characterized by a depressed light peak in the electrooculogram. VMD2 encodes a 585-amino acid protein with an approximate mass of 68 kDa which has been designated bestrophin. Bestrophin shares homology with the Caenorhabditis elegans RFP gene family, named for the presence of a conserved arginine (R), phenylalanine (F), proline (P), amino acid sequence motif. Bestrophin is a plasma membrane protein, localized to the basolateral surface of RPE cells consistent with a role for bestrophin in the generation or regulation of the EOG light peak. Bestrophin and other RFP family members represent a new class of chloride channels, indicating a direct role for bestrophin in generating the light peak. The VMD2 gene underlying Best disease was shown to represent the first human member of the RFP-TM protein family. More than 97% of the disease-causing mutations are located in the N-terminal RFP-TM domain implying important functional properties. The bestrophins are four-pass transmembrane chloride-channel proteins, and the RFP-TM or bestrophin domain extends from the N-terminus through approximately 350 amino acids and contains all of the TM domains as well as nearly all reported disease causing mutations. Interestingly, the RFP motif is not conserved evolutionarily back beyond Metazoa, neither is it in plant members.	2.17734e-81
NZ_CP018677.1\|WP_000642319.1\|1841633_1842692_-\|2,3-butanediol-dehydrogenase	gnl\|CDD\|176195	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.	0
NZ_CP018677.1\|WP_001186401.1\|1830181_1831531_+\|chromate-efflux-transporter	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	2.57835e-60
NZ_CP018677.1\|WP_001133053.1\|1846484_1847504_-\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	3.26675e-168
NZ_CP018677.1\|WP_001177517.1\|1847517_1848480_-\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	gnl\|CDD\|238958	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).	1.46231e-132
NZ_CP018677.1\|WP_000465452.1\|1838446_1839142_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.07982e-87
NZ_CP018677.1\|WP_000080821.1\|1829196_1829940_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.17942e-74
NZ_CP018677.1\|WP_001271394.1\|1843533_1844937_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP018677.1\|WP_000448778.1\|1827434_1829168_-\|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|181346	PRK08275, PRK08275, putative oxidoreductase; Provisional.	0
NZ_CP018677.1\|WP_000864074.1\|1827168_1827414_-\|ferredoxin-family-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	8.24428e-10

>NZ_CP018677.1|WP_000925651.1|1835795_1836587_-|sulfite-exporter-TauE/SafE-family-protein
MLLLVVEGIVIGFLLGLTGAGGGILAVPALMTSQGWSVAQAAPIGLLAVALSTLIGTIEGLFKKIVRYRAAIWIALIGAPMAHIGILIANTISPIWLMLMFSLVMFTVGYRLINNRVSDFHNPPCQVNPSTGRFIWNFKTGGVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHSIVATSLMIIFLISGMSIVMHIAEGFQYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQKVFALMVFAVAIYMVIKIVNLTNI
>NZ_CP018677.1|WP_000822394.1|1834681_1835686_-|hypothetical-protein
MKRINVAICGFGRIGQQIAELLLNRSTYYKQKYQIDARLVGVCNSSSGLIDQEGLQASKWLDKTQYQAGLTEQKFLKQVQADVIIETGPSDYVTGGKGLFYLNYALTHSMNAIAVSKGALVVEGKKLINLAHQHNKKLFFSGATAAALPTVDLFEYNLAGCQILEIESVFTGTTNFILNDMLQHECAFTESLEKAQARGIAEPNSSFDVDGWDTAAKITILANTVLGVDVKIQDIPRQGISHVTTEHIRDWKKENIIPRLVGFIHIKNQQIQTGVELRLVPANHPFAHLQGSNKCIRVLTQEMGEFVVSGGASAPLATAAAALKDFELMLKTGC
>NZ_CP018677.1|WP_001023744.1|1833731_1834649_+|EamA-family-transporter
MNILLYVAVVLIWGTTWIGIAVQSHYATPVVAILWRFAISALLLWVVLLFSGKLQRIALKDHLFCMLQGLCVFGLNFICFYTAVKYVNSGLESVIFSMAVFFNAINALIFFKQKPSPNFAPAALLGLSGIVLLFWHDLINSQFNAQLLMGIGLCAIGTYGFSLGNMISVRHQKRGLNIFSTNCYAMTYGALVMLILALFTGQDLMPPMNFPFLSSVLYLAVFGTVIGFSAYFSLVGRIGAAKAAYSTLLFPLVALTVSTFFEGYEWTLNAVFGILLILLGNYLMFSKFEIGKKLFSSQKNCEKQA
>NZ_CP018677.1|WP_000331400.1|1832710_1833565_-|AraC-family-transcriptional-regulator
MAYQTLEQLQQSKAKLHETVVLDENMQLAFWSNQQDRVSVCSDHHTLSLYIQDGYESYQKTPAGWKNGGGPGRFCLLPEHQESTWDIRGGLKFVHLYYTDQHLRDVAEKIWDKEPNQIELNEVVFNDDERIRALYQFFLLDCDWQDSSNHLQMSTTASLLLNHLIRKYSSVQWQQPTIKGGLAPHKLKYIQEWIEDHLDQALTLSDLANVVNLSEYHFAHMFKQSMNMAPHQYVMQRRLTKAKGLIQSSQLSLQDIALVCGFSSASHLSHRFKQFYGMSPSQLR
>NZ_CP018677.1|WP_004835232.1|1832318_1832714_+|helix-turn-helix-transcriptional-regulator
MTVTIPHDIQSSDCQRVSQVLARVGEKWSILIVMTLASHPHRFSEIKRRINGISQRMLTLCLRGLERDGLVKRTVYPVVPSHVEYELTPLGHSLTEPVIALGQWAQQHIADIDAARAAFDAAQEKPITLDT
>NZ_CP018677.1|WP_000771644.1|1831614_1832223_-|NAD(P)H-dependent-oxidoreductase
MKLLQIDTSILGEQSVSRQLTSSVIRQLSTAYPDAEIIHHDFALEPIPHLSDAEFLAWQGVEPNNEIAQQRVARNTQYLDEFLSSDIVVIGAPMYNFSFPSQLKAWLDRLSVAGKTFRYTENGPQGLVEGKRVIIASSRGGVYSEGSPAEALDYQETYIKAFFNFIGVTDITFVRAEGIAFGPEARQTALDNAAAQIAQLAG
>NZ_CP018677.1|WP_001186401.1|1830181_1831531_+|chromate-efflux-transporter
MQQKQLNTPDDSVEQVTFWQAILFWLKLGFISFGGPAGQIAVMHQELVEQKRWISEKRFLHALNYCMLLPGPEAQQLATYIGWLMHRTTGGLVAGILFVLPSLFILIGLSWVYIKFGDVPVISGIFYGIKPAVTAIVFHATYRIGSRSLKNKFLWFVAIAAFFAIFFLKLPFPLIVLSAGIAGYLASKKYPELFSSAAGHKASQKDYGPAIIDDDTPTPEHAKFHWLRLAKLIFVAIALWLLPILALGAYFGWHHSYTQMAWFFTKAALLTFGGAYAVLPYVYQGAVNHFGWLSPTQMIDGLALGETTPGPLIMVVAFVGFLGGVNHSLLGSEHLFFAGALGAVIVTWFTFLFSFVFIFAGAPIIESTHNEIKFTAPLTAITAAVVGVILNLALFFSYHVLWPQGFSGHFDIVAALITVAAFIALFRFNINVLYVIFASALVGLAVTFF
>NZ_CP018677.1|WP_000080821.1|1829196_1829940_-|GntR-family-transcriptional-regulator
MSQLPQDPKNHKPLYDQLRELILNKIVNGEYAVLSQIPSENEFAEQFGVSRITVRQALNQLQLEGYIFKVPGKGTFVSKPKTFQNISSLQGFAEAMSSAGHEILNRVISAELKQVPMHVVPKLKLPVKANVYEIQRVRLLNRQPVSYELTYLSEHIGLKLKEKAIDLRTTDIFKALEQECDIPLGHADLSIDATVADEELAALLQVEIGTPVLRVERLTHDANGQPIDYEYLYFSGDTFQYRLRIHR
>NZ_CP018677.1|WP_000448778.1|1827434_1829168_-|fumarate-reductase/succinate-dehydrogenase-flavoprotein-subunit
METKYFEFDIVVIGGGTAGPMAAIKAKQENPNLKVLLIEKANVKRSGAISMGMDGLNNAVIPGYATPEQYTKEITIANDGVVNQTTVYAYAKHSFTTIQQLDQWGIKFEKDETGEFAVKKVHHMGAYVLPMPEGHDVKKVLYRQLKRAQVKINNRIVTTKLLKNEQGAINGVLGFDCRSGDFYVIKTKAAILCCGAAGRLGLPASGYLMGTYENPTNAGDGYAMAYHAGAELANLECFQINPLIKDYNGPACAYVTGPLGGYTANSKGERFIECDYWSGQMMWEFYQELESGNGPVYLKVDHLAEETIQTIEEILHTNERPSRGRFHEGRGINYRQDMVEMHISEIGFCSGHSASGVWVNEKAETSVKGLYSAGDMAAVPHNYMLGAFTYGWFAGVNAAQYVNAVEDSELNQSEIEAEKARIFAPLDCSEGLPPEQVEYKLRRFVNDYLQPPKTRQKMEIGLKRFEEIKQDIKRISARNPHELMRAAEVSFIRDCAEMAARASLFREESRWGLYHYRADFPQKNNSDWFCHAHLKKDEHGNMVSFKKPIEPYVVPINQDEAVSYDRLRIQKDVALAD
>NZ_CP018677.1|WP_000864074.1|1827168_1827414_-|ferredoxin-family-protein
MAFIFKEVQHRTVAPVIIDEDKCIADKGCTVCVDVCPMDLLAIDPTTQKAYMQFDECWYCMPCEKDCPTDAVKVNIPYLLK
>NZ_CP018677.1|WP_000465452.1|1838446_1839142_-|MBL-fold-metallo-hydrolase
MFFKQFFEKESSTYTYMLGCEETRVAVLIDPVASDIEIYAKELEQHQFTLIYTLDTHVHADHITAADLLRERFHCKSVLHRNSDVSCGDILITDGCMLKVGNLSIEARYTPGHTNACTSYLVGNMIFTGDALLIDGCGRTDFQQGSAGTLYDSIHKQLFSLPDETIVYPGHDYKGRLSSTIGYERLNNSRLGQNRSREDFIELMNNLNLPYPKQIDKALPANQACGSISQL
>NZ_CP018677.1|WP_001096433.1|1839333_1840605_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MAKLNFELEQDFYILFEQLKALFPNAILFLVDTSTQAIHYKFNTDDISVESMAALTQDHHNQYLEINTPKMRRRFIYQEHDIYIAEHRIIGKLHILQPVSIENDIVDGVELTEQLQDLAKVFNSCSPEMTRMFSIIQRVAITEFPVLVRGESGSGKELVAKAIHDYSQRKNKIFVAINCAALNSNILESELFGHVKGAFTGAIRDHKGVFERAAGGTLFLDEIAEIPLELQAKLLRVLETGEFTPVGGEKPIQANVRIITATHKALREEAKAGRFRHDLLYRLRVIPIFIPPLRERKVDIPIIVDQILKESSTQLYTMPRHVNQKAMQVLLNYDWPGNVRELKNTLLYALTMANGKDEIEVEDLPNELLNADDYIKLPETNAELSPENVQAALEKYNHNLNMVANIFGISRTTLWRYRQKHKL
>NZ_CP018677.1|WP_032002782.1|1840674_1841586_+|bestrophin
MIVRDKSNVFKLLFAWKGTILPKVLPALSFVVLISACVVWLSYYHWIQIPTVPAIGFTIFGVILSICTGFRNNACYDRWWEGRKLWGALIANARHIVRDSHVLSNEQREHLIHQVLIICNLLRDRLRQQTVEPTKFLEHAYLNNSSLNYLNEHINAPQFVLENIQKDLVKALKDGEISDIIYGTLTRHIVELGNIQAGCDRIAGTPLPYSYSVLLHRAVYCFCFILPFSLEAALGIWTPLIVGLIAYMFLGLDALSAQIEEPFGLQENDLPLDSIVRLIERESLSSLGQPLPPIIEAQNNNLL
>NZ_CP018677.1|WP_000642319.1|1841633_1842692_-|2,3-butanediol-dehydrogenase
MKAARFYDRGDIRIEDIPEPEVTPGTVGIKVAWCGICGTDLHEFMEGPIFIPPCGHPHPISGESAPITMGHEFSGVVYAVGEGVDDIEIGQHVVVEPYIVADDVPTGPGDNYHLSKNMNFIGLGGRGGGLSEKIAVKRRWVHPISNKIPLDQAALIEPLSVGHHAYVRSGAKAGDIALVGGAGPIGLLLSAILKAKGLKVIITELSAKRKEKAKESGVADYILDPSEVDVVSEVMKITNGDGVDVAFECSSVNKVLDTLVAAVKPTGVIVIVSIWSHPASINVHSVVMKELDVRGTIAYVNDHQETIKLVEEGKINLEPFITQRIQLDDLISQGFETLIHNNESAVKIIVHP
>NZ_CP018677.1|WP_000238436.1|1842721_1843507_-|acetoin-reductase
MVKGLKNKVALVTGAAQGIGRGIALRLAQEGAHIALVDMKQDRLNDVQQEIQALGVNASTFIADVSDREQVYAAINHAEQTLGGFDVMINNAGIAQVQAIADITPDEFQKIVDINIGGVLWGIQAAAAKFKQREHKGKIINACSIAGHDGFALLGIYSATKFAVRALTQAAAKEYASHGITVNGYCPGIVGTDMWVEIDKRFAEITGAAIGETYKKYVEGIALGRAQTPDDVAALVAFLASEDSDYITGQSILTDGGIVYR
>NZ_CP018677.1|WP_001271394.1|1843533_1844937_-|dihydrolipoyl-dehydrogenase
MSAAQFDLIVIGAGPGGYVAAIRAAQLGLKTAIVEEQHLGGICLNWGCIPTKALLAGAELATQFKHAGQFGFQVSQLDFDVQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFNGRAQLTAKEKIEVTDAQGNSQVLSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVVGSGAIGSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVITDAVVQSIQIENEQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYCKTNVAGLYAIGDVAGAPCLAHKASHEAMICIEKIAGVANVHSLDRSQIPGCIFTHPQVASIGLTENAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVTEHIQGFAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM
>NZ_CP018677.1|WP_001289733.1|1844947_1846483_-|2-oxo-acid-dehydrogenase-subunit-E2
MSEIKTLEIPKWGLSMEEGTIAQWLIKEGDSFNKGDEICEIETTKIVNVLEAPFAGTLRKILAKDGDTLPVGGLIAVCADSEVSDAEIEKFIASLGGSAAQAPEAPSEQSKAETSAPVAEKTAQPQTAAASASAPAKVAKDDYAVPESLQGYQTSNELFATPHALKLAEKHNVNLAKVTGSGREGRISVQDIQKAVQASGGQWPDVRQQTQAKVVKSTADDSQVLATPVARRLAKQWGINLNDCRVSGTRGRVCKEDVEAVYYRNNPVSVSEQPVQCAAQPQSTVTTVAMNGMRKAIASRLQAAKRNAPHFRLVVDLNVEALQKLRKQINETVPQVKLSINDMLIKAAAAALIKVPEVNVQFDEATQSILQFSQADISVAVAIPNGLITPIVKAANQKSLAQISDDMRDLATRAKTGKLQPDEFQGGSFSISNLGMLGIKQFDAIINPPQGAIMALGASESRAVVENGNVVVREIVTATLSCDHRVIDGAVGAKFLASFKQFVENPALILV
>NZ_CP018677.1|WP_001133053.1|1846484_1847504_-|alpha-ketoacid-dehydrogenase-subunit-beta
MPNKSFRNAIKEAIESEMRRDPTVFVVGEDVRGGHGGKNTEENQLEGFGGVLGVTKGLWTEFGSERVIDTPITESAIIGMAAGAAATGLRPVADLMFMDFYGVCHDMLYNQAAKFRYMFGGKAKAPMVVRGMIGAGFSAAAQHSQSPYNVFAAVPGLKVVVPSSPYDVKGLLIQAIRDDDPVVFCEHKMLYDIKGEVPDDAYTIPFGVANYTREGTDVTIIALGLMVHRANEVADKLAKDGISVEVVDPRTISPLDEEGILESVASTGRVVIVDESAARCGFGHDVAALIAQKGFHYLKAPVELVTPPHTPVPFSPVLEKEWIPSVERIEQAVRKTLEA
>NZ_CP018677.1|WP_001177517.1|1847517_1848480_-|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha
MQLTEEQLLAAYKRMRDIREFEDRLHEENTNGDIPGFIHLYSGEEAVAVGICENLTDKDYITSTHRGHGHCIAKGCDIHAMMLEIFGKDDGLCRGKGGSMHIADLDKGMLGANGIVGGGPPLAIGAALTAKTLKTGGVGLSFTGDGGSNQGLTFEAMNMAVVLKLPVIFVFENNGFGEGTGHDYAVGSKDIAGRAAGFGLPAVKVDGTDFFAVYEAAQTAIERARRGEGPSVIETITNRFYGHFEGDPGLIRSKEEVEFIKENKDPLKIFREKVKGKIDEAKLDEIDAASKANVDDAVAKARAAAYPKPEQLLTDVYVSY
>NZ_CP018677.1|WP_000364551.1|1848844_1849831_+|lipoyl-synthase
MDLKRQIETGIKLRGIDKVSRIPIKILPTEELPKKPEWIRAKITDFEEIQRIKNLLRQQKLHSVCEEAACPNLPECFAGGTATFMIMGDICTRRCPFCDVAHGRPMPLDENEPKHLAETVANLNLKYVVITSVDRDDLHDGGAAHFVKCIEEIRNRCPDTLIEILVPDFRGRLETALSTLSLSPPDVFNHNIETVPRLYKAMRPGSDYQHSLNLLKRFKKYCPDIKTKCGLMVGLGEIEAEVIALLNDLKDHDVDLVTIGQYLQPSKSHAPIHRFVNLQEFERYTQHGQRLGFKNIWSAPMVRSSYFADRQYFGESAPKPFSREDVLS

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Crispr_ID: NZ_CP018677_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018677_3

3801493-3801577

Orphan

Consensus_repeat	Method
GCTTGTCTTGCGCCAAAATTAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018677_3

>merge|NZ_CP018677|3|3801493-3801577|CRISPRCasFinder
GCTTGTCTTGCGCCAAAATTAAAAGATTATCAATCTTCTTTACTCTACGCGCAGTTTCACTGCTTGTCTTGCGCCAAAGTTAAAA

>NZ_CP018677|3|3|3801493-3801577|CRISPRCasFinder
GCTTGTCTTGCGCCAAAATTAAAA	GATTATCAATCTTCTTTACTCTACGCGCAGTTTCACT
GCTTGTCTTGCGCCAAAGTTAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018677.1\|WP_005119701.1\|3804964_3809485_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223716
NZ_CP018677.1\|WP_000101096.1\|3812353_3812716_-\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_CP018677.1\|WP_000125649.1\|3795660_3796236_+\|SdpI-family-protein	unknown	unknown	gnl\|CDD\|379303
NZ_CP018677.1\|WP_001047593.1\|3791311_3792016_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380313
NZ_CP018677.1\|WP_000505932.1\|3809631_3811710_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP018677.1\|WP_001005337.1\|3788699_3790175_-\|alanine:cation-symporter-family-protein	unknown	unknown	gnl\|CDD\|376500
NZ_CP018677.1\|WP_000077301.1\|3800928_3801432_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
NZ_CP018677.1\|WP_000729762.1\|3811756_3812293_-\|purine-binding-chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NZ_CP018677.1\|WP_000003701.1\|3792043_3793258_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP018677.1\|WP_001259501.1\|3801582_3801951_-\|YbaN-family-protein	unknown	unknown	gnl\|CDD\|377291
NZ_CP018677.1\|WP_001984826.1\|3803062_3803206_+\|entericidin-A/B-family-lipoprotein	unknown	unknown	gnl\|CDD\|227797
NZ_CP018677.1\|WP_002037080.1\|3790597_3790801_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018677.1\|WP_001198164.1\|3799066_3799852_+\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP018677.1\|WP_015451615.1\|3804503_3804932_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018677.1\|WP_001016575.1\|3803331_3804468_+\|succinyl-diaminopimelate-desuccinylase	unknown	unknown	gnl\|CDD\|237265
NZ_CP018677.1\|WP_001984830.1\|3793385_3795560_+\|TIGR01666-family-membrane-protein	unknown	unknown	gnl\|CDD\|130727
NZ_CP018677.1\|WP_001017534.1\|3802055_3802964_+\|DUF1853-family-protein	unknown	unknown	gnl\|CDD\|378094
NZ_CP018677.1\|WP_000473032.1\|3796393_3798940_+\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|99797
NZ_CP018677.1\|WP_000389061.1\|3812739_3813123_-\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_CP018677.1\|WP_000490937.1\|3790274_3790415_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP018677.1\|WP_005119701.1\|3804964_3809485_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	1.23501e-116
NZ_CP018677.1\|WP_000125649.1\|3795660_3796236_+\|SdpI-family-protein	gnl\|CDD\|379303	pfam13630, SdpI, SdpI/YfhL protein family. This family of proteins includes the SdpI and YfhL proteins from B. subtilis. The SdpI protein is a multipass integral membrane protein that protects toxin-producing cells from being killed. Killing is mediated by the exported toxic protein SdpC an extracellular protein that induces the synthesis of an immunity protein.	0.00838382
NZ_CP018677.1\|WP_001047593.1\|3791311_3792016_+\|nitroreductase	gnl\|CDD\|380313	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB. Members of this family utilize FMN as a cofactor and catalyze reduction of a variety of nitroaromatic compounds, including nitrofurans, nitrobenzens, nitrophenol, nitrobenzoate and quinones by using either NADH or NADPH as a source of reducing equivalents in an obligatory two-election transfer mechanism. The enzyme is typically a homodimer. Mycobacterium smegmatis nitroreductase NfnB plays a role in resistance to benzothiazinone.	1.03168e-34
NZ_CP018677.1\|WP_000505932.1\|3809631_3811710_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	6.1217e-71
NZ_CP018677.1\|WP_001005337.1\|3788699_3790175_-\|alanine:cation-symporter-family-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	0
NZ_CP018677.1\|WP_000077301.1\|3800928_3801432_-\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	8.56335e-26
NZ_CP018677.1\|WP_000729762.1\|3811756_3812293_-\|purine-binding-chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	2.92747e-31
NZ_CP018677.1\|WP_000003701.1\|3792043_3793258_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41627e-94
NZ_CP018677.1\|WP_001259501.1\|3801582_3801951_-\|YbaN-family-protein	gnl\|CDD\|377291	pfam04304, DUF454, Protein of unknown function (DUF454). Predicted membrane protein.	4.46882e-39
NZ_CP018677.1\|WP_001984826.1\|3803062_3803206_+\|entericidin-A/B-family-lipoprotein	gnl\|CDD\|227797	COG5510, COG5510, Predicted small secreted protein [Function unknown].	4.44613e-07
NZ_CP018677.1\|WP_001198164.1\|3799066_3799852_+\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	1.40229e-39
NZ_CP018677.1\|WP_001016575.1\|3803331_3804468_+\|succinyl-diaminopimelate-desuccinylase	gnl\|CDD\|237265	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed.	0
NZ_CP018677.1\|WP_001984830.1\|3793385_3795560_+\|TIGR01666-family-membrane-protein	gnl\|CDD\|130727	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are >700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS. [Cell envelope, Other].	0
NZ_CP018677.1\|WP_000101096.1\|3812353_3812716_-\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.79368e-36
NZ_CP018677.1\|WP_000473032.1\|3796393_3798940_+\|PepSY-domain-containing-protein	gnl\|CDD\|99797	cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues, and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule, which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	4.52302e-132
NZ_CP018677.1\|WP_000389061.1\|3812739_3813123_-\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.27194e-36
NZ_CP018677.1\|WP_001017534.1\|3802055_3802964_+\|DUF1853-family-protein	gnl\|CDD\|378094	pfam08907, DUF1853, Domain of unknown function (DUF1853). This family of proteins are functionally uncharacterized.	5.07662e-40

>NZ_CP018677.1|WP_000077301.1|3800928_3801432_-|L,D-transpeptidase
MSQFKLEDADILIDLANQTLSLPKHNKFYVVSTGKNGIGEQENTGKTPRGWHRVAKKFGMQSPKNAVFIARQPTGEVYSSELAAQFPERDWILSRILWLDGLEEGFNKGEGHDTMQRYIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDALVYLSEQSLT
>NZ_CP018677.1|WP_001198164.1|3799066_3799852_+|YdcF-family-protein
MQVSKWIRIFLAVIGSILFLDGLFLAFLNKIHVGTLVPLVLGAFFCLYALFYYHLERFFFYHYRLHTLWRFGWLCFWIWLIGLGYFFNFIKENKDASQNLPAVKAIIVLGSGVENGQPSAILAKRLDTAAPVALSQPQAKVILTGGLDFSEKEPEALVMSRYLEQHFHIAKDRMILEDKSTSTELNLKNSKPLLEQAHISINQPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLITRYNVWLREYFAYASGWLLNEY
>NZ_CP018677.1|WP_000473032.1|3796393_3798940_+|PepSY-domain-containing-protein
MFKKFLFQIHWFLGISAGLILSIMGVTGAIYSYDQQILKWVNTDSYVVQAQSSPKLTPAQLYQHFTTIQPEIKINSITIAKDPTASSVVNIEKEGERRGYNMMVNPYTAQVLPEVQGRKLLLLIQQIHRNLTAGEFGKQITGACALMLIYFVLSGLYLRWPKKHSARQWLALKPKLKGRNFIWDLHAVVGTWVIVFYLLFACTGLYWSYDWWRSGMFKVLGVEQPKMQGHSGSGRNKDQLPKIQLDNAQLITALNQTWSGFNNQIGRDYSTLTVNLPKKDDGKIELSFVDATPQHERARNQAVYNYKTANIEKMELYEDKKLNQKIMSSMLPVHRGSFFGPVYQFVAMLASLAMPLFFVTGWMLYLKRRKQKKLTQAARQSLAGHYIDQNAKPWLITYATQTGVAEQLAWSTATSLQEAHQPVQVKSVQQLTEADLQQHEQILFVISTYGTGEAPDLASNFAKKLLKTNLELQHVKYAVLALGSKEYPDTYCSFGYTVDEWLKNNGAKALFDIIEVDNANPADIQNWNQALVKATKLDLHAVNIEKVFDNWTLQQRDLLNPNSLGQPAYNIELTASHEAVWQAGDIAEIQPGNSPERINKFLQHHHILKNAVVDSLQVSIEKALWNKDLTGEIEPFANLDHLLEQLPTLPTREYSIASIPSQQVLRLVVRQQYDESGDLGLGSGWLTQHTEINQNVALRIRTNESFHLIDDNRPIICIGNGTGIAGLMSLLHTRTRHNYTENWLIFGERQRAHDFFYASTIEAWQTMGMLKRLDLAFSRDQEQRVYVQDIIRQNAAELVNWIERGAVLYVCGSIDGMASGVDQALIHILGEEQVDELRQQGRYRRDVY
>NZ_CP018677.1|WP_000125649.1|3795660_3796236_+|SdpI-family-protein
MTAKTLYAYTLQPVPYEVSEAEQRNAQLLIWRSTNKISTKIWAIMGVILALAILGLIFIKNYSTVICWVAIVCVVLYYLGRKYGLEWYVKRKMNEFPVQEIKGIRLGVQPHGIVMRQQMGLQEGVGTIGWKNIYEWYNTPDFILVNFKVKDPKGQEQQGAYILPKRMDSKNFSFNTIRKHLKESVGEPKTL
>NZ_CP018677.1|WP_001984830.1|3793385_3795560_+|TIGR01666-family-membrane-protein
MKSWFKRLKRATYNTSFMYNVRMLIAFSGTAFVPYFLGHQLATIPLTLGVVAAGLSDIDDRFSVRIMNLIYTYIGFFITAASVQLLFPYPMLFALGLIASCIGWILLGSLGRRYATISYGCLVVSVYTMLGVHLFDQWYIQPALLVAGAAWYGLIATISFLLFPVRQLQDKLAASYASLGDFLFAKSNLFDVDMTPASYQQSMIDLSLENGKLITIFNDLKTALLTRLKGDRGQKGTRRSLHYYFVAQDIHERADSAHIDYQKLAKIFQHSDILFRFQRILAIQGKACQELNECILQRKPYIHNKRFKQSFENLRLSLVKLRDDQQYDLLWVNALFALYRNLKSIDSQLLNLETEQHIQSDKVKQAENQLKDDDLKGWNDIVVRIKQNLTPESVLFRHAIRVSIVLFIGYVFIQMTHIEYGYWIMLTALFVSQPNFNATKRRLRLRIVGTLVGIIVGLSIVFLVPSVEGQLVMLILSGVLFFELRSKQYAQATAFITILALINFNLDGSAVAAAIPRFVDTLIGCALAWFGVTFIWPDWKFRRLPRSIRRSLQAQCNYLAEVVKQYHEGHNHALNYRIVRRAAHNTDAEVASLISTLATEPDFDPTRKSDIFEFLCLNHTFLSYIAALGAHREKIQDQAVLNVLDQALDDIQGALLRDEMPDLTAQNMLQTIRQRLSQNDEDDQKSLIILQQLSLMLSVLNRFSMLKQRLSHDLDNDASELASL
>NZ_CP018677.1|WP_000003701.1|3792043_3793258_-|multidrug-effflux-MFS-transporter
MSEQTAQRQYSIGWIMLLALLTALGPLSIDMYLPALPQMAHDFGVSTQMVANTLPAYFFGLAIGQLVYGPLSDRIGRKKPLYFGLALYAVASLFCVLATNEWSLIAARILQALGGCVGVVMARAAIRDRLDVQGSAQAFSSMMIVMGLAPILAPMIGAWILIWFPWQAIFIALSIVGAICWLCVHFFFKETLAVDKRLKLSLYQVATLYGAIFKDASFRLPMFAGCLTGAALFCYISSAPAVFMDQYGLNQQEFAYVFGLNAFGIMLMSSLNKHLTTRVEITKRLKAGSMVQVTGASIVLIAGLISAAPLWLVMLGLFLAISGIGLTGPNAMALAMSKQGARAGTASAIMGSMQFACGLLGGVLLNFLIWSASLNMGVMMVLFTLSGFIVVLKAIRQAKSQSLS
>NZ_CP018677.1|WP_001047593.1|3791311_3792016_+|nitroreductase
MNLEQVRLVDEAITSRHSVRAFLSTPIEPEVIKDILRVASRAPSGTNTQPWKVYVVTGHKRDEMVERVCAAQIEVSKNPELAEQYKETFAYYPEKWVSPFIDRRRENGWGLYGLLDIKKGEKEKMAAQQLRNFKLFDAPVGIFFTVNKAMGIGSKMDIAMMIQNVMVAAKARGLDTCPQAAWNHFHPLVLDILGAADDEELVCAIALGHADPEHIVNTFITPREPVENFAVFLD
>NZ_CP018677.1|WP_002037080.1|3790597_3790801_-|hypothetical-protein
MSLPLINKQFMKQGLAITIVTMKMNVTHATTEPQEIQQLGTDLNALFFNEKEKGTDSRVMTMACYSL
>NZ_CP018677.1|WP_000490937.1|3790274_3790415_-|hypothetical-protein
MFSGAMNLFYLKGAFSHVTFKGLVLGMMLLKLVTVIAIQVTLKVFP
>NZ_CP018677.1|WP_001005337.1|3788699_3790175_-|alanine:cation-symporter-family-protein
MNEQLNATLMSWVQFFNEPLWDFLVIFLLAVGIFYTVLTGAVQIRMFLQSIRVMKSSRTEGEDEHGLTPFQAFVTGLASRVGVGNIAGVAIAIAIGGPGAVFWMWVTAVLGMSSAFIESTLAQLFKVRDSNSKQFRGGPAYYITQGLRSKTFGVIFALALIFTYGFVFNSVQINAIANASSHAWGWDKANLIAHLGGVDLEISWVGLALVVMVALAIFGGIKRIAKFAEMFVPLKAGLYLSVALYIALSNYAILPDVLKLIVTEAFHFNAAAGGFFGAAVSMAMMQGIKRGLFSNEAGMGSAPNAAAASDVKHPVNQGLVQMLGVFVDTFIVCTSTAIIILVSGVYQDAGFVGVELTQRALETQVGHWGADFLAVLLFLFCYSAVLGNYAYAESNVQFINNNPKVMFIFRIFVLVMVYFGAIGSVPLVWSMADLFMGIMATINLVAILLLTPMARTLLKDYRAQLKQGIKEPVFKINKYPELKKKVDSDIW
>NZ_CP018677.1|WP_001259501.1|3801582_3801951_-|YbaN-family-protein
MRTLFWRTLVVIFITLGIIGAILPGMPTTVFLILAAWAASKGWPQMDAWLLNHPKYGPTLRDWRANGTVPRKAKWIATIMMTASGILMLFTSAPFWVKVFTDTTMLVVAIWLWLRPEPKLKD
>NZ_CP018677.1|WP_001017534.1|3802055_3802964_+|DUF1853-family-protein
MNIASIKTSYFEPWLQFSHPMVRQLAFTIASPNLLSQLPCSLTIRHSFQLHTDKNWEQHFQNYLPRLKQLDEAPEPLLQFMSRLKSTRLGLRFENLLWFWLQEDQYHPYQLLGHSIQKIDGAKTLGELDFLVLNQNTQEIEHWEVALKYYLGEGQLNLEQWSGLNRQDTLSKKLYHFTDKQFQFSEALGFKVQQRFAVLKGQLYLPLNLPQEQPIPEWVNLKRRLGTWGTEIPKSDFYRLERHEWLCPHQKASSNTAYWWTDGLYCQNINETRFYMFRHPALLSLKPSLIKNNGVLQETTSL
>NZ_CP018677.1|WP_001984826.1|3803062_3803206_+|entericidin-A/B-family-lipoprotein
MMKKVLVASVMVAFVLTGCNTFKGFGQDVSKAGDAVTNTAQKTENKM
>NZ_CP018677.1|WP_001016575.1|3803331_3804468_+|succinyl-diaminopimelate-desuccinylase
MNHSDTLSLSLELLQQPSVTPIDHTCQTIMADRLAKVGFHIEPMRFGDVDNLWARRGTEGPVFCFAGHTDVVPTGRLDAWNSDPFAPEIRDGKLYGRGSADMKTALAAMVVASERFVAKNPNHKGSIAFLITSDEEGPAVNGTVKVIETLEKRNEKITWCLVGEPSSTHKLGDIVKNGRRGSLNAVLKVQGKQGHVAYPHLARNPIHEASPALAELCQTVWDNGNEYFPATSFQISNIHAGTGATNVIPGALEVTFNFRYSTEVTAEQLKQRVHEILDKHGLQYEIVWNLSGLPFLTPVGELVNAAQTAILNVTGTETELSTSGGTSDGRFIAPTGAQVLELGVLNATIHQINEHVDVHDLDPLTDIYEQILENLLAQ
>NZ_CP018677.1|WP_015451615.1|3804503_3804932_-|hypothetical-protein
MDQQELQHLITVSTGFIDAYIIECNDQVPMLLPQNIVLSAMDVKNGVKHIEWHDVKLPVYSVHNAIDQHAVALVIEGEDISQRFALICKTMPVSTRLRISEIVDEMDEHEAEQHPAVFKYVRMQHQRYYIPNLEYIEKTLGL
>NZ_CP018677.1|WP_005119701.1|3804964_3809485_-|hybrid-sensor-histidine-kinase/response-regulator
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINKWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSAELAWAVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLVDNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLSNTLMAETVTGLELDYIEQDSLAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLRGSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQSWDAYVEQHGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEVLLDKPTLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYTPDLSNDLPQQDSTSFEPISNIEQEPEVVATVENFSDSVDWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLMRYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRAGQNSNFQPLPVVEAFDTESEIFSEQEVISEVIIDEIPVELEPALAELETHHDQVFDTAVTELATPVEMITTVTSQESEIAADEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVQAIAYQLENAFEQFALHHFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFNSEPVMTFIQGDGTEPPPMMGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKHGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRMQRQQANKPETGRIELNIQRQGTDVVVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVESIYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFESPQELFEYENKRYPLRYLSEFVGNQPIPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTQRHKQLSEAIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVASDSEVKS
>NZ_CP018677.1|WP_000505932.1|3809631_3811710_-|methyl-accepting-chemotaxis-protein
MGFKLKKKSGNRGATGKSSVNFIAKIQSKIEQFASLFGESEKSKPILYAALLCLVCALISLAYLFYNVPRHNQLIRSLGELRLLSQTISKQATEATESGSQEAITKLQQSKKDFDENLLEIENIHGKSTDEYQKVEKIWGEVSKNIDLISSHQRVLNQLYDTNISISETVPEIQAEYNLMVDQMARQGLPSSQVIIAKNQVFIAERILRSINSVLSGTDGNVSTSDFSVDIETFGTYLNAELNGNAELGVDRIADPALRESLESIKSEYDKVLKSAAATVLKNGSQIVNVRQASSQIFSKSDVMLESLGHLSDVARKNWLTLFLGAVLILSLSGLIFSVFKLITLRSVMDKKRVARLQEEYDRNQNAILRLLDEIADLADGDLRSYATVSEDFTGAIADSINFAIDQLRDLVSRIHETSQEVARYTQDTQSITNQLAEASEHQAQEIAGASTAMNEMAQSIDQVSANASESAEVAQRSVQIASNGAQVVNRSIEGMDTIREQIQETSKRIKRLGESSQEIGNIVSLINDIADQTNILALNAAIQASMAGEAGRGFAVVADEVQRLAERSASATKQIETLVKTIQTDTNEAVISMEQTTTEVVRGANLAKDAGIALDEIQKVSGDLAKLIASISDAAKLQSASASHIATTMTVVQEITSQTTTATFDTARSVSELANMAESLRESVTDFKLPD
>NZ_CP018677.1|WP_000729762.1|3811756_3812293_-|purine-binding-chemotaxis-protein-CheW
MAANGFIELLRLSKRGNKNYASVQNEAQRWSGIAFEMRGQYFVAPLGEVSEVIYPPKYTPVPNTQSWVKGLANIRGRLLSVSDLAHFISGQRSSFSSTQKVLCISHHDQYVGLVVDQVLGIQHFNKKSFFSQSSDLEENLKEYCQGYFHQHNQHWHVFLFSRLLQNPHYMNASTKFIN
>NZ_CP018677.1|WP_000101096.1|3812353_3812716_-|response-regulator
MARILIVDDSPTETFRFKEILTKHGYDVLEASNGADGVTLAKAEQPDLVLMDVVMPGVNGFQATRQITRDEDTKHIPVVIVSTKDQATDRVWGKRQGAIDYLIKPIEEKQLIDVIKQFLN
>NZ_CP018677.1|WP_000389061.1|3812739_3813123_-|response-regulator
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQNIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1438327 : 1480028

Acinetobacter_phage(35.0%)

tail,integrase,terminase,transposase

attL 1434998:1435012|attR 1475730:1475744

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1434998:1435012	attL	NA	NA	NA	NA
WP_032003042.1\|1438327_1439485_+\|integrase	site-specific integrase	A0A2H4J339	uncultured_Caudovirales_phage	1.1e-133	62.7
WP_001076477.1\|1439481_1440366_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000549863.1\|1440356_1440812_+	hypothetical protein	NA	NA	NA	NA
WP_000527288.1\|1440926_1441919_+	FRG domain-containing protein	NA	NA	NA	NA
WP_000119264.1\|1441925_1442096_-	hypothetical protein	A0A2H4JBW6	uncultured_Caudovirales_phage	2.4e-13	69.2
WP_001292077.1\|1442096_1442312_-	hypothetical protein	I2GUB6	Acinetobacter_phage	8.5e-32	92.9
WP_000028957.1\|1442308_1442518_-	hypothetical protein	A0A0P0IRG7	Acinetobacter_phage	6.3e-32	94.2
WP_000578497.1\|1442514_1443024_-	phage protein	A0A0P0I8H3	Acinetobacter_phage	1.6e-33	87.8
WP_032003041.1\|1443020_1443557_-	hypothetical protein	NA	NA	NA	NA
WP_000464381.1\|1443549_1443729_-	hypothetical protein	NA	NA	NA	NA
WP_000986115.1\|1443729_1444020_-	hypothetical protein	NA	NA	NA	NA
WP_032003040.1\|1444160_1445189_-	ead/Ea22-like family protein	A0A2I7QY11	Vibrio_phage	3.8e-13	29.0
WP_023060560.1\|1445201_1445882_-	DNA polymerase III subunit epsilon	NA	NA	NA	NA
WP_032003039.1\|1446052_1446424_-	hypothetical protein	A0A0D4DCB5	Acinetobacter_phage	1.1e-10	40.0
WP_032003037.1\|1446420_1446750_-	hypothetical protein	NA	NA	NA	NA
WP_032003036.1\|1446830_1447163_-	hypothetical protein	A0A0P0ZGH3	Escherichia_phage	1.5e-14	41.6
WP_000440996.1\|1447374_1447662_-	hypothetical protein	NA	NA	NA	NA
WP_000660939.1\|1447672_1448371_-	LexA family transcriptional regulator	A0A0P0IYD9	Acinetobacter_phage	7.8e-26	35.8
WP_000335916.1\|1448507_1448741_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000818521.1\|1448773_1449148_+	hypothetical protein	NA	NA	NA	NA
WP_000290738.1\|1449181_1449382_+	hypothetical protein	NA	NA	NA	NA
WP_000200037.1\|1449378_1449564_+	hypothetical protein	NA	NA	NA	NA
WP_032003035.1\|1449560_1450016_+	hypothetical protein	NA	NA	NA	NA
WP_001205618.1\|1450012_1450651_+	hypothetical protein	Q1MVG0	Enterobacteria_phage	1.1e-47	46.2
WP_001092750.1\|1450656_1452327_+	DNA cytosine methyltransferase	Q5QF27	Pseudomonas_virus	2.4e-153	46.2
WP_001033655.1\|1452323_1453394_+	site-specific DNA-methyltransferase	A0A1B0VM49	Pseudomonas_phage	2.3e-109	59.3
WP_031944289.1\|1453470_1454514_+	hypothetical protein	A0A2H4J580	uncultured_Caudovirales_phage	4.3e-28	52.8
WP_000994861.1\|1454510_1455275_+	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	1.0e-63	48.8
WP_000991088.1\|1455271_1455805_+	hypothetical protein	NA	NA	NA	NA
WP_000836736.1\|1455801_1456533_+	hypothetical protein	NA	NA	NA	NA
WP_032003033.1\|1456529_1456901_+	hypothetical protein	NA	NA	NA	NA
WP_021511152.1\|1456897_1457305_+	hypothetical protein	NA	NA	NA	NA
WP_032003032.1\|1457301_1457586_+	hypothetical protein	NA	NA	NA	NA
WP_000172116.1\|1457664_1458444_+	hypothetical protein	A0A0P0J0C5	Acinetobacter_phage	3.8e-29	32.4
WP_021511154.1\|1458492_1458708_+	hypothetical protein	NA	NA	NA	NA
WP_000592660.1\|1458967_1459666_+	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA
WP_001085641.1\|1459666_1460353_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000101391.1\|1460366_1461209_+	hypothetical protein	NA	NA	NA	NA
WP_000142836.1\|1461352_1461616_+	hypothetical protein	NA	NA	NA	NA
WP_023187832.1\|1461697_1463941_+\|tail	lambda family phage tail tape measure protein	Q4L1H3	Burkholderia_phage	5.6e-09	36.8
WP_000175172.1\|1463948_1464770_+	hypothetical protein	NA	NA	NA	NA
WP_000551741.1\|1465170_1465581_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_000904390.1\|1466204_1466945_+	hypothetical protein	NA	NA	NA	NA
WP_001043692.1\|1467083_1468016_-\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_000842716.1\|1468083_1469028_+	Abi family protein	NA	NA	NA	NA
WP_000535151.1\|1469265_1470207_+	hypothetical protein	NA	NA	NA	NA
WP_001166851.1\|1470406_1470763_+	hypothetical protein	NA	NA	NA	NA
WP_000633139.1\|1470762_1471101_+	hypothetical protein	NA	NA	NA	NA
WP_032003161.1\|1471081_1472527_+	hypothetical protein	NA	NA	NA	NA
WP_000371258.1\|1472514_1473129_+	hypothetical protein	NA	NA	NA	NA
WP_001183519.1\|1473207_1473666_+	hypothetical protein	A0A143FJ28	Bacillus_phage	1.8e-10	38.5
WP_001237356.1\|1473677_1473905_+	hypothetical protein	NA	NA	NA	NA
WP_004886737.1\|1473977_1474883_+	hypothetical protein	NA	NA	NA	NA
WP_004886741.1\|1474885_1475689_+	hypothetical protein	NA	NA	NA	NA
WP_000130707.1\|1475681_1475882_+	TraR/DksA C4-type zinc finger protein	G3EN77	Psychrobacter_phage	1.7e-05	42.4
1475730:1475744	attR	NA	NA	NA	NA
WP_000014220.1\|1475893_1476406_+	hypothetical protein	NA	NA	NA	NA
WP_032003159.1\|1476425_1478417_+\|terminase	terminase	A0A077SK57	Escherichia_phage	3.6e-07	54.9
WP_000996675.1\|1478489_1480028_+\|tail	phage tail protein	NA	NA	NA	NA

DBSCAN-SWA_2

1491938 : 1530750

uncultured_virus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000343018.1\|1491938_1493147_+\|transposase	IS256-like element ISAba26 family transposase	A0A218MNI5	uncultured_virus	3.1e-46	46.5
WP_032002730.1\|1501734_1502172_+	hypothetical protein	NA	NA	NA	NA
WP_032002731.1\|1502171_1502930_+	hypothetical protein	NA	NA	NA	NA
WP_032002733.1\|1502972_1503170_-	hypothetical protein	NA	NA	NA	NA
WP_032002734.1\|1503328_1504864_+	hypothetical protein	A0A222YXQ7	Escherichia_phage	1.2e-31	26.2
WP_010326927.1\|1505255_1506281_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_032002737.1\|1506631_1507003_-	hypothetical protein	NA	NA	NA	NA
WP_044099071.1\|1507131_1509084_+	hypothetical protein	NA	NA	NA	NA
WP_032002740.1\|1509083_1510529_+	hypothetical protein	A0A222YY44	Escherichia_phage	5.5e-82	42.6
WP_032002741.1\|1510685_1511315_+	hypothetical protein	NA	NA	NA	NA
WP_148307302.1\|1511311_1512391_+	ImmA/IrrE family metallo-endopeptidase	A0A0U4JD08	Gordonia_phage	2.4e-34	31.0
WP_032002743.1\|1512612_1513326_+	hypothetical protein	NA	NA	NA	NA
WP_032002746.1\|1513538_1514303_+	hypothetical protein	NA	NA	NA	NA
WP_000030336.1\|1514378_1515191_+	hypothetical protein	NA	NA	NA	NA
WP_000627452.1\|1515190_1515886_+	hypothetical protein	NA	NA	NA	NA
WP_000894311.1\|1515878_1516097_+	hypothetical protein	NA	NA	NA	NA
WP_001279705.1\|1516218_1516497_+	hypothetical protein	NA	NA	NA	NA
WP_032002747.1\|1516493_1517264_+	TIGR02594 family protein	A0A0B5L5G5	Acinetobacter_phage	7.8e-144	92.6
WP_000343018.1\|1517463_1518672_+\|transposase	IS256-like element ISAba26 family transposase	A0A218MNI5	uncultured_virus	3.1e-46	46.5
WP_032002748.1\|1518716_1519358_-	hypothetical protein	NA	NA	NA	NA
WP_032002750.1\|1519354_1520197_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_050437491.1\|1520358_1521066_+	hypothetical protein	NA	NA	NA	NA
WP_001043692.1\|1521073_1522006_+\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_032002754.1\|1522045_1522867_+	hypothetical protein	NA	NA	NA	NA
WP_050437492.1\|1522956_1524039_-	DUF4935 domain-containing protein	NA	NA	NA	NA
WP_032002756.1\|1524080_1525379_-	Y-family DNA polymerase	A0A2H4JBL5	uncultured_Caudovirales_phage	1.9e-158	61.4
WP_032002757.1\|1525382_1525877_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	5.9e-44	57.7
WP_001043692.1\|1527227_1528160_+\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_001055585.1\|1528376_1528760_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000618091.1\|1528756_1529092_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_005080579.1\|1529166_1530750_+\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	7.2e-144	54.0

DBSCAN-SWA_3

2444481 : 2522463

Faecalibacterium_phage(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094190431.1\|2444481_2445571_+\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_000769552.1\|2445776_2447462_+	arylsulfatase	NA	NA	NA	NA
WP_080746777.1\|2447487_2448441_+	formylglycine-generating enzyme family protein	NA	NA	NA	NA
WP_000680441.1\|2448453_2449641_+	outer membrane porin, OprD family	NA	NA	NA	NA
WP_000470077.1\|2449873_2450950_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_000351364.1\|2450962_2451907_+	oxidoreductase	NA	NA	NA	NA
WP_086225923.1\|2451950_2452643_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000252463.1\|2452749_2453208_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000411710.1\|2453278_2454511_-	3-(3-hydroxy-phenyl)propionate transporter MhpT	NA	NA	NA	NA
WP_170628398.1\|2454758_2455598_+	p-hydroxycinnamoyl CoA hydratase/lyase	NA	NA	NA	NA
WP_001181819.1\|2455635_2457087_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_170628401.1\|2457170_2459057_+	AMP-binding protein	NA	NA	NA	NA
WP_001119798.1\|2459130_2460270_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_020752951.1\|2460381_2461602_+	OprD family porin	NA	NA	NA	NA
WP_000758288.1\|2461658_2462195_+	DUF3237 domain-containing protein	NA	NA	NA	NA
WP_000372406.1\|2462235_2462625_+	PaaI family thioesterase	NA	NA	NA	NA
WP_001110014.1\|2462657_2464409_+	tannase/feruloyl esterase family alpha/beta hydrolase	NA	NA	NA	NA
WP_000092890.1\|2464473_2465187_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_000042108.1\|2465430_2467017_-	aldehyde dehydrogenase (NADP(+))	NA	NA	NA	NA
WP_000339251.1\|2467047_2467959_-	5-dehydro-4-deoxyglucarate dehydratase	NA	NA	NA	NA
WP_000235918.1\|2468121_2469456_-	glucarate dehydratase	NA	NA	NA	NA
WP_000369465.1\|2469740_2471099_+	MFS transporter	NA	NA	NA	NA
WP_001181021.1\|2472842_2473739_+	DMT family transporter	NA	NA	NA	NA
WP_001125645.1\|2473754_2474825_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_000442405.1\|2474954_2476415_+	coniferyl aldehyde dehydrogenase	NA	NA	NA	NA
WP_025469910.1\|2476589_2476928_-	hypothetical protein	NA	NA	NA	NA
WP_001048417.1\|2477107_2477428_-	hypothetical protein	NA	NA	NA	NA
WP_001043692.1\|2477720_2478653_+\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_000138943.1\|2478761_2480168_-	amino acid permease	NA	NA	NA	NA
WP_000972691.1\|2480623_2481718_-	arginine N-succinyltransferase	NA	NA	NA	NA
WP_005120336.1\|2481714_2482950_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	2.2e-23	28.6
WP_002001056.1\|2483085_2483508_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_001140777.1\|2483826_2485257_+	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
WP_001041177.1\|2485285_2486056_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_001277428.1\|2486115_2486835_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000191923.1\|2486900_2487608_+	hypothetical protein	NA	NA	NA	NA
WP_000428073.1\|2487803_2489135_+	APC family permease	NA	NA	NA	NA
WP_000691957.1\|2489154_2490600_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_079344381.1\|2490746_2492105_+	amino acid permease	NA	NA	NA	NA
WP_005080579.1\|2492288_2493872_-\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	7.2e-144	54.0
WP_000618091.1\|2493946_2494282_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001055585.1\|2494278_2494662_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000416092.1\|2494985_2495345_+	hypothetical protein	NA	NA	NA	NA
WP_000368995.1\|2495462_2498699_-	ATP-binding protein	NA	NA	NA	NA
WP_000773510.1\|2498890_2499331_-	hypothetical protein	NA	NA	NA	NA
WP_010326927.1\|2499725_2500751_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_001224549.1\|2501169_2501610_-	hypothetical protein	NA	NA	NA	NA
WP_010326927.1\|2506139_2507165_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_000732875.1\|2509136_2510012_-	hypothetical protein	NA	NA	NA	NA
WP_032002822.1\|2510856_2511945_+	DUF898 domain-containing protein	NA	NA	NA	NA
WP_086222338.1\|2512004_2513057_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_000622036.1\|2513565_2514651_-	macro domain-containing protein	B0FIJ9	Escherichia_phage	8.4e-19	41.5
WP_000233088.1\|2514650_2515307_-	DUF4433 domain-containing protein	NA	NA	NA	NA
WP_000653917.1\|2515629_2520360_-	AAA family ATPase	NA	NA	NA	NA
WP_000443163.1\|2520423_2522463_-\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA

DBSCAN-SWA_4

2552575 : 2614869

Acinetobacter_phage(38.89%)

integrase,transposase

attL 2598887:2598946|attR 2616071:2616133

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043692.1\|2552575_2553508_+\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_000261481.1\|2553818_2555042_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_001101792.1\|2555038_2556067_+	hypothetical protein	NA	NA	NA	NA
WP_000570798.1\|2556063_2556330_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001165438.1\|2556683_2556947_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_000824257.1\|2556930_2557194_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_001055585.1\|2557562_2557946_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000618091.1\|2557942_2558278_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_005080579.1\|2558352_2559936_+\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	7.2e-144	54.0
WP_002036368.1\|2560008_2561196_-	DUF4268 domain-containing protein	NA	NA	NA	NA
WP_025466770.1\|2561295_2562504_-\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.2e-61	37.5
WP_000205099.1\|2562847_2564878_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_001986427.1\|2565143_2566502_+	argininosuccinate synthase	A0A140XAJ5	Dickeya_phage	2.0e-54	81.0
WP_000013369.1\|2566560_2567823_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_001084867.1\|2567972_2569007_+	dihydroorotase	NA	NA	NA	NA
WP_001982681.1\|2568991_2569654_+	ribonuclease T	L0N5X9	Acaryochloris_phage	2.0e-07	35.4
WP_000364479.1\|2569931_2572046_+	TonB-dependent receptor	NA	NA	NA	NA
WP_000077961.1\|2572104_2573349_-	NADH:flavin oxidoreductase/NADH oxidase family protein	NA	NA	NA	NA
WP_000550799.1\|2573534_2575124_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.2e-19	31.7
WP_000008511.1\|2575101_2576112_-	ABC transporter permease	NA	NA	NA	NA
WP_000536102.1\|2576111_2577164_-	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_086225925.1\|2577193_2578906_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000277812.1\|2579044_2582260_-	LysM peptidoglycan-binding domain-containing protein	A0A0A7NU10	Lactobacillus_phage	3.4e-15	37.8
WP_002036374.1\|2582492_2583872_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	7.9e-38	39.6
WP_001289238.1\|2584004_2585648_+	hypothetical protein	NA	NA	NA	NA
WP_001292948.1\|2585647_2586391_+	NAD(+) diphosphatase	NA	NA	NA	NA
WP_001048903.1\|2586413_2587277_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000919365.1\|2587280_2587988_-	BON domain-containing protein	NA	NA	NA	NA
WP_000959396.1\|2588068_2588470_-	YraN family protein	NA	NA	NA	NA
WP_001275992.1\|2588663_2589500_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	5.3e-45	39.9
WP_000147963.1\|2589592_2589979_+	hemin receptor	NA	NA	NA	NA
WP_000887355.1\|2589981_2590872_-	LysR family transcriptional regulator ArgP	NA	NA	NA	NA
WP_005120377.1\|2590978_2591581_+	amino acid transporter	NA	NA	NA	NA
WP_000896583.1\|2591638_2592280_-	cation transporter	NA	NA	NA	NA
WP_000058917.1\|2592345_2592747_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_000129799.1\|2592801_2593053_-	hypothetical protein	NA	NA	NA	NA
WP_000005667.1\|2593262_2594495_-	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_001187369.1\|2594491_2595700_-	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA
WP_000775473.1\|2595731_2597054_-	Xaa-Pro aminopeptidase	NA	NA	NA	NA
WP_001150153.1\|2597121_2597754_-	UPF0149 family protein	NA	NA	NA	NA
WP_000893185.1\|2597818_2598379_+	hypothetical protein	NA	NA	NA	NA
WP_000003719.1\|2598375_2598660_+	cell division protein ZapA	NA	NA	NA	NA
2598887:2598946	attL	NA	NA	NA	NA
WP_002067557.1\|2599088_2600441_+\|integrase	integrase family protein	A0A0R6PGY7	Moraxella_phage	1.6e-75	39.5
WP_000343018.1\|2600793_2602002_+\|transposase	IS256-like element ISAba26 family transposase	A0A218MNI5	uncultured_virus	3.1e-46	46.5
WP_005120384.1\|2602184_2603831_-	phosphoethanolamine--lipid A transferase	NA	NA	NA	NA
WP_000803003.1\|2604112_2606431_-	TonB-dependent receptor	NA	NA	NA	NA
WP_001019745.1\|2606920_2607466_-	N-acetylmuramidase	A0A0B5L5G7	Acinetobacter_phage	2.1e-95	92.3
WP_001076396.1\|2607564_2607747_-	hypothetical protein	NA	NA	NA	NA
WP_001138125.1\|2608110_2608389_-	hypothetical protein	J7I481	Acinetobacter_phage	9.9e-49	100.0
WP_032002826.1\|2608408_2608924_-	hypothetical protein	A0A0D4DBX8	Acinetobacter_phage	1.1e-74	93.2
WP_000729387.1\|2609352_2609868_-	DUF2280 domain-containing protein	A0A1B1P9C2	Acinetobacter_phage	3.2e-45	61.3
WP_000435241.1\|2609926_2610568_-	hypothetical protein	A0A0D4DBV4	Acinetobacter_phage	1.1e-122	96.2
WP_000378525.1\|2610536_2610971_-	hypothetical protein	A0A0P0IVP9	Acinetobacter_phage	6.0e-69	88.2
WP_001136775.1\|2611030_2611486_-	hypothetical protein	A0A0P0HSF5	Acinetobacter_phage	3.5e-83	98.7
WP_000152665.1\|2612147_2612384_-	hypothetical protein	NA	NA	NA	NA
WP_001039309.1\|2612592_2612937_-	hypothetical protein	NA	NA	NA	NA
WP_000861102.1\|2613399_2613654_-	hypothetical protein	NA	NA	NA	NA
WP_085940648.1\|2613779_2614869_+\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
2616071:2616133	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2667442 : 2733905

Faecalibacterium_phage(15.38%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195944.1\|2667442_2668252_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_001245168.1\|2668253_2670713_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_001136091.1\|2670716_2671409_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-31	37.0
WP_002036590.1\|2671453_2672077_+	arylesterase	NA	NA	NA	NA
WP_001987747.1\|2672109_2672748_-	carbonic anhydrase	NA	NA	NA	NA
WP_000197530.1\|2673008_2674034_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000107250.1\|2674060_2675068_+	hypothetical protein	NA	NA	NA	NA
WP_000044175.1\|2675090_2677355_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_000102721.1\|2677524_2678163_-	Fe-S biogenesis protein NfuA	NA	NA	NA	NA
WP_000902942.1\|2678320_2678938_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_000875356.1\|2679108_2680785_+	arylsulfatase	NA	NA	NA	NA
WP_086225841.1\|2680889_2681789_+	formylglycine-generating enzyme family protein	NA	NA	NA	NA
WP_000854552.1\|2681898_2682063_+	hypothetical protein	NA	NA	NA	NA
WP_000098361.1\|2682601_2684149_+	hypothetical protein	NA	NA	NA	NA
WP_000859892.1\|2684192_2685527_-	D-serine ammonia-lyase	NA	NA	NA	NA
WP_115423553.1\|2685689_2687219_-	inorganic phosphate transporter	NA	NA	NA	NA
WP_000105327.1\|2687783_2691470_+	methionine synthase	A0A140XBC7	Dickeya_phage	3.3e-14	60.0
WP_010326927.1\|2691665_2692691_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_000422634.1\|2693080_2693860_-	APH(3')-VI family aminoglycoside O-phosphotransferase	E4ZFP6	Streptococcus_phage	5.8e-30	34.3
WP_010326927.1\|2693960_2694986_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_000350749.1\|2695023_2696409_-	SIR2 family protein	Q38324	Lactococcus_phage	3.0e-29	27.1
WP_001016325.1\|2696994_2697441_-	hypothetical protein	NA	NA	NA	NA
WP_000731762.1\|2697632_2698778_+	galactose mutarotase	NA	NA	NA	NA
WP_001043692.1\|2699465_2700398_-\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_032002835.1\|2701220_2702009_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000856719.1\|2702003_2703299_-	glutaminase	NA	NA	NA	NA
WP_000117817.1\|2703477_2703960_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.9e-19	44.4
WP_000371873.1\|2704194_2705493_+	MFS transporter	NA	NA	NA	NA
WP_086225840.1\|2705555_2706731_-	hypothetical protein	NA	NA	NA	NA
WP_032002836.1\|2706907_2708548_-	thiamine pyrophosphate-binding protein	E5EQ70	Micromonas_sp._RCC1109_virus	7.0e-25	23.9
WP_001040550.1\|2708586_2710053_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_000735779.1\|2710066_2710858_-	aspartate dehydrogenase	NA	NA	NA	NA
WP_000009973.1\|2710873_2711668_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.6e-13	28.6
WP_000988617.1\|2711683_2712508_-	alpha/beta hydrolase	A0A249XPN5	Mycobacterium_phage	6.2e-14	31.7
WP_000211626.1\|2712544_2713066_-	cupin domain-containing protein	NA	NA	NA	NA
WP_000064049.1\|2713089_2714313_-	MFS transporter	NA	NA	NA	NA
WP_000411885.1\|2714355_2715567_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000627772.1\|2715596_2716526_-	VOC family protein	NA	NA	NA	NA
WP_000991785.1\|2717294_2718362_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_000847099.1\|2718378_2718678_-	hypothetical protein	NA	NA	NA	NA
WP_000118514.1\|2718705_2719011_-	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA
WP_000051057.1\|2719284_2720097_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_000927114.1\|2720143_2720443_-	hypothetical protein	NA	NA	NA	NA
WP_000074694.1\|2720457_2721039_-	nicotinamide mononucleotide transporter	A0A2H4YHF9	Raoultella_phage	8.0e-08	29.1
WP_000070467.1\|2721285_2722074_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_002000370.1\|2722175_2722580_-	poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA	NA	NA	NA
WP_000151613.1\|2722676_2723936_-	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA
WP_000632828.1\|2723949_2725944_-	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA	NA	NA	NA
WP_000627259.1\|2726180_2726522_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_001185269.1\|2726608_2727139_-	YaeQ family protein	NA	NA	NA	NA
WP_000267730.1\|2727327_2728590_+	C4-dicarboxylate transporter DctA	NA	NA	NA	NA
WP_032002838.1\|2728627_2729626_-	GTP-binding protein	NA	NA	NA	NA
WP_000761577.1\|2730124_2730325_+	hypothetical protein	NA	NA	NA	NA
WP_001142469.1\|2730435_2730951_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_000254582.1\|2731212_2731827_-	MarC family protein	NA	NA	NA	NA
WP_000179784.1\|2731838_2733905_-\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	2.0e-16	25.1

DBSCAN-SWA_6

2768246 : 2829802

Escherichia_phage(22.22%)

tail,integrase,terminase,transposase

attL 2759059:2759075|attR 2790089:2790105

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2759059:2759075	attL	NA	NA	NA	NA
WP_000831314.1\|2768246_2769473_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAT5	uncultured_Caudovirales_phage	7.2e-75	40.2
WP_001050367.1\|2769847_2770513_-	hypothetical protein	NA	NA	NA	NA
WP_000332614.1\|2770661_2771297_+	SOS response-associated peptidase family protein	A0A218MNF5	uncultured_virus	3.0e-69	57.4
WP_000022554.1\|2771438_2771939_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	6.3e-46	57.8
WP_001215499.1\|2771935_2773234_+	DNA polymerase V subunit UmuC	A0A2H4JBL5	uncultured_Caudovirales_phage	2.3e-156	62.4
WP_001072150.1\|2773387_2774086_+	hypothetical protein	NA	NA	NA	NA
WP_000602528.1\|2774469_2774829_+	hypothetical protein	NA	NA	NA	NA
WP_000766533.1\|2774954_2775725_-	TIGR02594 family protein	A0A0B5L5G5	Acinetobacter_phage	1.7e-151	98.4
WP_001279704.1\|2775721_2776009_-	hypothetical protein	NA	NA	NA	NA
WP_000894311.1\|2776130_2776349_-	hypothetical protein	NA	NA	NA	NA
WP_004743501.1\|2776341_2777037_-	hypothetical protein	NA	NA	NA	NA
WP_004743499.1\|2777036_2777849_-	hypothetical protein	NA	NA	NA	NA
WP_004743497.1\|2777923_2778373_-	hypothetical protein	NA	NA	NA	NA
WP_032002839.1\|2778498_2782329_-	DEAD/DEAH box helicase family protein	A0A1Y0T2N3	Pseudomonas_phage	5.9e-200	43.3
WP_000209679.1\|2782404_2783916_-	hypothetical protein	A0A222YY44	Escherichia_phage	3.0e-83	43.1
WP_023060547.1\|2783915_2785868_-	hypothetical protein	NA	NA	NA	NA
WP_000863709.1\|2785941_2786595_-	hypothetical protein	NA	NA	NA	NA
WP_000098517.1\|2786594_2788130_-	hypothetical protein	A0A222YXQ7	Escherichia_phage	3.6e-31	26.2
WP_000852568.1\|2788288_2788483_+	hypothetical protein	NA	NA	NA	NA
WP_000852828.1\|2788510_2789281_-	hypothetical protein	G4WT79	Acinetobacter_phage	3.8e-82	80.0
WP_000190166.1\|2789280_2789679_-	hypothetical protein	G4WT78	Acinetobacter_phage	7.8e-47	69.7
WP_005080579.1\|2796031_2797615_-\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	7.2e-144	54.0
2790089:2790105	attR	NA	NA	NA	NA
WP_000618091.1\|2797689_2798025_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001055585.1\|2798021_2798405_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_023060549.1\|2802543_2803437_-	hypothetical protein	NA	NA	NA	NA
WP_001240940.1\|2803436_2803886_-	hypothetical protein	NA	NA	NA	NA
WP_001187722.1\|2803885_2804533_-	hypothetical protein	NA	NA	NA	NA
WP_001098598.1\|2804649_2804928_-	hypothetical protein	NA	NA	NA	NA
WP_001067778.1\|2804989_2805757_-	hypothetical protein	NA	NA	NA	NA
WP_001022847.1\|2805778_2807074_-	hypothetical protein	NA	NA	NA	NA
WP_000151778.1\|2807192_2807480_-	hypothetical protein	NA	NA	NA	NA
WP_000718477.1\|2807484_2808111_-	hypothetical protein	NA	NA	NA	NA
WP_000217480.1\|2808174_2809953_-	hypothetical protein	NA	NA	NA	NA
WP_000120881.1\|2810107_2810410_-	hypothetical protein	NA	NA	NA	NA
WP_000934750.1\|2810406_2810955_-	hypothetical protein	NA	NA	NA	NA
WP_001272161.1\|2810944_2812075_-	hypothetical protein	A0A222YXT1	Escherichia_phage	1.3e-22	35.2
WP_001243269.1\|2812076_2812355_-	hypothetical protein	NA	NA	NA	NA
WP_000996675.1\|2812369_2813908_-\|tail	phage tail protein	NA	NA	NA	NA
WP_032003159.1\|2813980_2815972_-\|terminase	terminase	A0A077SK57	Escherichia_phage	3.6e-07	54.9
WP_000014220.1\|2815991_2816504_-	hypothetical protein	NA	NA	NA	NA
WP_000130707.1\|2816515_2816716_-	TraR/DksA C4-type zinc finger protein	G3EN77	Psychrobacter_phage	1.7e-05	42.4
WP_004886741.1\|2816708_2817512_-	hypothetical protein	NA	NA	NA	NA
WP_004886737.1\|2817514_2818420_-	hypothetical protein	NA	NA	NA	NA
WP_001237356.1\|2818492_2818720_-	hypothetical protein	NA	NA	NA	NA
WP_001183519.1\|2818731_2819190_-	hypothetical protein	A0A143FJ28	Bacillus_phage	1.8e-10	38.5
WP_000371258.1\|2819268_2819883_-	hypothetical protein	NA	NA	NA	NA
WP_032003161.1\|2819870_2821316_-	hypothetical protein	NA	NA	NA	NA
WP_044099005.1\|2821296_2821635_-	hypothetical protein	NA	NA	NA	NA
WP_032003019.1\|2821634_2821991_-	hypothetical protein	NA	NA	NA	NA
WP_032003021.1\|2822137_2822851_-	recombinase	A0A0R6PHM5	Moraxella_phage	1.1e-40	42.1
WP_032003017.1\|2823725_2824142_+	hypothetical protein	NA	NA	NA	NA
WP_032003016.1\|2824294_2824501_+	hypothetical protein	NA	NA	NA	NA
WP_001043692.1\|2824523_2825456_-\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_032003013.1\|2827155_2827554_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_032003012.1\|2827546_2829802_-\|tail	tail tape measure protein	I6NLI9	Burkholderia_phage	1.6e-27	49.6

DBSCAN-SWA_7

2896076 : 2959431

Acinetobacter_phage(76.6%)

holin,protease,terminase,capsid,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032002999.1\|2896076_2896706_+	SOS response-associated peptidase family protein	A0A218MNF5	uncultured_virus	1.4e-66	56.7
WP_032002998.1\|2897526_2898021_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	2.0e-44	59.6
WP_032002997.1\|2898024_2899323_+	Y-family DNA polymerase	A0A2H4JBL5	uncultured_Caudovirales_phage	1.3e-159	61.4
WP_032002995.1\|2899400_2900348_+	restriction endonuclease	Q858R6	Enterobacteria_phage	1.2e-37	34.6
WP_001043692.1\|2900741_2901674_-\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_032002994.1\|2901715_2902159_+	hypothetical protein	NA	NA	NA	NA
WP_032002993.1\|2902174_2902375_-	hypothetical protein	NA	NA	NA	NA
WP_031993495.1\|2902322_2902691_-	hypothetical protein	NA	NA	NA	NA
WP_031993494.1\|2902691_2903006_-	hypothetical protein	E5KY21	Escherichia_phage	6.0e-26	58.9
WP_032002992.1\|2903006_2903552_-	N-acetylmuramidase	J7I0Y1	Acinetobacter_phage	1.5e-96	95.0
WP_000433918.1\|2903595_2903985_-	hypothetical protein	J7I481	Acinetobacter_phage	2.5e-66	100.0
WP_032002990.1\|2904053_2907479_-	bacteriophage protein	A0A0P0HSH9	Acinetobacter_phage	0.0e+00	92.8
WP_000835161.1\|2907471_2907834_-	hypothetical protein	A0A0P0J0A2	Acinetobacter_phage	6.2e-51	79.2
WP_000368369.1\|2907830_2908337_-	DUF1833 family protein	J7HXQ5	Acinetobacter_phage	2.5e-90	97.6
WP_032002989.1\|2908336_2908735_-	hypothetical protein	J7I0X8	Acinetobacter_phage	7.0e-72	97.7
WP_032002988.1\|2908795_2909272_-	hypothetical protein	NA	NA	NA	NA
WP_032002987.1\|2909307_2909895_-	hypothetical protein	NA	NA	NA	NA
WP_079344403.1\|2909985_2912319_-	hypothetical protein	A0A0D4DC37	Acinetobacter_phage	0.0e+00	93.0
WP_001277696.1\|2912656_2912875_-	hypothetical protein	A0A0P0I8C2	Acinetobacter_phage	1.2e-28	94.2
WP_032002983.1\|2912876_2913275_-	hypothetical protein	A0A0P0IRA6	Acinetobacter_phage	2.2e-70	96.2
WP_000539743.1\|2913276_2913645_-	hypothetical protein	A0A0P0IDX0	Acinetobacter_phage	1.1e-55	98.1
WP_170825905.1\|2913616_2914054_-	hypothetical protein	J7I0W8	Acinetobacter_phage	4.7e-69	91.0
WP_000524217.1\|2914032_2914401_-	glutamate 5-kinase	A0A0P0I456	Acinetobacter_phage	2.6e-65	100.0
WP_000008494.1\|2914402_2914792_-	hypothetical protein	A0A0D4DC24	Acinetobacter_phage	6.6e-67	100.0
WP_000692546.1\|2914796_2915462_-	stress-responsive nuclear envelope protein	A0A0D4DBW4	Acinetobacter_phage	1.9e-114	100.0
WP_000214189.1\|2915528_2916485_-	hypothetical protein	A0A0D4DBM4	Acinetobacter_phage	2.1e-178	100.0
WP_002062129.1\|2916512_2917280_-	hypothetical protein	J7I0W4	Acinetobacter_phage	2.3e-119	92.5
WP_001139861.1\|2917393_2917585_-	hypothetical protein	A0A0P0IKM2	Acinetobacter_phage	1.7e-28	100.0
WP_000004367.1\|2917808_2918045_-	hypothetical protein	A0A0D4DC19	Acinetobacter_phage	1.1e-35	93.6
WP_002154920.1\|2918143_2918572_-	hypothetical protein	A0A0D4DBV9	Acinetobacter_phage	1.7e-71	98.6
WP_032002981.1\|2918580_2919684_-\|capsid	minor capsid protein	A0A0D4DBL9	Acinetobacter_phage	1.5e-204	98.9
WP_032002980.1\|2919685_2921137_-	DUF4055 domain-containing protein	A0A0D4DCP1	Acinetobacter_phage	7.2e-284	99.0
WP_032002979.1\|2921133_2922561_-\|terminase	phage terminase large subunit	J7I460	Acinetobacter_phage	8.2e-264	96.2
WP_032002978.1\|2922550_2923021_-	DUF2280 domain-containing protein	A0A0D4DC15	Acinetobacter_phage	3.0e-82	99.4
WP_032002977.1\|2923079_2923721_-	hypothetical protein	J7I4N9	Acinetobacter_phage	2.6e-124	97.7
WP_032002976.1\|2923689_2924124_-	hypothetical protein	A0A0P0IVP9	Acinetobacter_phage	1.5e-75	95.1
WP_000134358.1\|2924136_2924328_-	hypothetical protein	J7I0V8	Acinetobacter_phage	2.6e-24	85.7
WP_000527469.1\|2924405_2924618_-	hypothetical protein	NA	NA	NA	NA
WP_002053026.1\|2924790_2925543_-	hypothetical protein	A0A0P0J081	Acinetobacter_phage	8.7e-132	94.8
WP_002120863.1\|2925553_2925955_-	DUF559 domain-containing protein	A0A0P0IKL1	Acinetobacter_phage	1.8e-67	96.2
WP_000378367.1\|2925954_2926278_-	hypothetical protein	NA	NA	NA	NA
WP_001039748.1\|2926267_2926447_-	hypothetical protein	NA	NA	NA	NA
WP_024436719.1\|2926443_2926842_-	HNH endonuclease	K7P7B7	Enterobacteria_phage	2.0e-26	48.5
WP_000017854.1\|2926838_2927246_-	hypothetical protein	NA	NA	NA	NA
WP_000137332.1\|2927242_2928043_-	hypothetical protein	A0A0P0IDV1	Acinetobacter_phage	7.6e-142	93.6
WP_032002975.1\|2928045_2928927_-	replication protein	A0A0P0IKQ2	Acinetobacter_phage	8.9e-136	93.9
WP_079344408.1\|2928919_2929144_-	hypothetical protein	A0A0P0I444	Acinetobacter_phage	1.9e-34	97.3
WP_024435837.1\|2929215_2929491_-	hypothetical protein	A0A0P0IVP2	Acinetobacter_phage	3.2e-39	95.6
WP_032002972.1\|2929546_2929903_-	hypothetical protein	J7I452	Acinetobacter_phage	1.5e-57	97.5
WP_001102751.1\|2929911_2930100_-	hypothetical protein	NA	NA	NA	NA
WP_032002970.1\|2930205_2930892_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_032002968.1\|2931002_2931380_+	AAA family ATPase	NA	NA	NA	NA
WP_001043692.1\|2931402_2932335_-\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_153564233.1\|2932347_2933769_+	AAA family ATPase	NA	NA	NA	NA
WP_032002966.1\|2933799_2934660_+	DNA adenine methylase	A0A0P0YLW3	Yellowstone_lake_mimivirus	2.9e-14	25.3
WP_032002964.1\|2934964_2935405_+	hypothetical protein	A0A0N7IRE9	Acinetobacter_phage	4.4e-75	97.9
WP_032002963.1\|2935407_2935731_+	hypothetical protein	A0A0P0IRC4	Acinetobacter_phage	7.4e-56	98.1
WP_032002961.1\|2935742_2936846_+	ATP-binding protein	A0A1B1P9H8	Acinetobacter_phage	4.1e-53	55.9
WP_001043692.1\|2938115_2939048_+\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_000037347.1\|2939539_2940403_-	iron-containing redox enzyme family protein	NA	NA	NA	NA
WP_000043926.1\|2940726_2941299_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000075452.1\|2941910_2943251_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_000509752.1\|2943668_2945087_+	glutamate synthase	NA	NA	NA	NA
WP_000474098.1\|2945297_2946353_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_086225912.1\|2946409_2946913_+	hypothetical protein	NA	NA	NA	NA
WP_001290023.1\|2946973_2948002_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001127143.1\|2948001_2949132_-	YdcF family protein	NA	NA	NA	NA
WP_005119988.1\|2949136_2950171_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_000388070.1\|2950190_2950694_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_086225914.1\|2950994_2952233_-	lactonase family protein	NA	NA	NA	NA
WP_032002959.1\|2952464_2953622_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_000165805.1\|2953621_2954056_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_000632984.1\|2954104_2956333_-\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_032002958.1\|2956656_2958693_-	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	1.7e-41	31.6
WP_000739695.1\|2958816_2959431_-\|protease	metalloprotease secretion chaperone CpaB	NA	NA	NA	NA

DBSCAN-SWA_8

2982501 : 3036237

Enterobacteria_phage(28.57%)

tRNA,coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043692.1\|2982501_2983434_+\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_000720299.1\|2983490_2983922_-	hypothetical protein	NA	NA	NA	NA
WP_001043692.1\|2984009_2984942_+\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	9.7e-56	39.6
WP_000161254.1\|2985400_2985532_-	hypothetical protein	NA	NA	NA	NA
WP_001989301.1\|2985711_2986824_-	OmpW family protein	NA	NA	NA	NA
WP_005119979.1\|2987131_2989288_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_001019944.1\|2989481_2989988_+	N-acetyltransferase	NA	NA	NA	NA
WP_000825554.1\|2990020_2990404_-	hypothetical protein	NA	NA	NA	NA
WP_005080579.1\|2990550_2992134_-\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	7.2e-144	54.0
WP_000618091.1\|2992208_2992544_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001055585.1\|2992540_2992924_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000650375.1\|2993077_2993359_-	hypothetical protein	NA	NA	NA	NA
WP_001123841.1\|2993547_2994018_-	hypothetical protein	A0A0P0HSF5	Acinetobacter_phage	1.4e-31	45.4
WP_000179474.1\|2994430_2994682_-	hypothetical protein	NA	NA	NA	NA
WP_000345332.1\|2994980_2996216_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_000527031.1\|2996665_2998903_+	TonB-dependent receptor	NA	NA	NA	NA
WP_001133114.1\|2998965_2999520_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001243511.1\|3000459_3000798_-	hypothetical protein	NA	NA	NA	NA
WP_000262548.1\|3001393_3001891_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000920706.1\|3002553_3003237_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_001279982.1\|3004016_3004703_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_000055764.1\|3004929_3005949_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_000873967.1\|3005939_3008399_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_029777014.1\|3008408_3009101_-	molecular chaperone	NA	NA	NA	NA
WP_001017238.1\|3010265_3012872_-	aminopeptidase N	NA	NA	NA	NA
WP_000420541.1\|3013190_3013448_+	hypothetical protein	NA	NA	NA	NA
WP_160948611.1\|3013665_3014757_+	hypothetical protein	NA	NA	NA	NA
WP_000204873.1\|3014790_3015618_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_086378869.1\|3015739_3016105_-	5-carboxymethyl-2-hydroxymuconate Delta-isomerase	NA	NA	NA	NA
WP_000808302.1\|3016142_3017855_-	AAA family ATPase	A0A172Q090	Acinetobacter_phage	1.3e-77	40.0
WP_000874704.1\|3018085_3019258_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_001097900.1\|3019453_3020422_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000494374.1\|3020418_3021609_-	transcriptional regulator	NA	NA	NA	NA
WP_001269055.1\|3021752_3023264_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_001075435.1\|3023485_3024922_+	ethanolamine permease	NA	NA	NA	NA
WP_000122150.1\|3024938_3026324_+	ethanolamine ammonia-lyase subunit EutB	NA	NA	NA	NA
WP_000774014.1\|3026334_3027150_+	ethanolamine ammonia-lyase subunit EutC	NA	NA	NA	NA
WP_001098471.1\|3027314_3028037_+	glutamine amidotransferase	NA	NA	NA	NA
WP_000803936.1\|3028494_3030222_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	1.5e-187	57.2
WP_000009660.1\|3030390_3030900_+	peptidyl-prolyl cis-trans isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	9.4e-13	34.0
WP_000221682.1\|3030915_3031635_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_000462397.1\|3031642_3031873_-	hypothetical protein	NA	NA	NA	NA
WP_000365042.1\|3032012_3032666_+	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA
WP_094190431.1\|3033007_3034098_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_000854009.1\|3034231_3035062_-	OXA-134 family carbapenem-hydrolyzing class D beta-lactamase OXA-235	NA	NA	NA	NA
WP_094190431.1\|3035147_3036237_+\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA

DBSCAN-SWA_9

3271016 : 3283528

Acinetobacter_phage(40.0%)

tail,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032002913.1\|3271016_3271577_-	hypothetical protein	A0A1B1IRI7	uncultured_Mediterranean_phage	2.0e-24	36.8
WP_032002912.1\|3271637_3272165_-	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	4.1e-35	47.9
WP_032002910.1\|3272240_3273140_-	hypothetical protein	NA	NA	NA	NA
WP_032002909.1\|3273151_3273775_-	hypothetical protein	NA	NA	NA	NA
WP_032002907.1\|3273767_3274253_-	hypothetical protein	NA	NA	NA	NA
WP_032002905.1\|3274249_3275893_-\|head,tail	head-tail connector protein	A0A2H4J3N6	uncultured_Caudovirales_phage	1.5e-123	45.0
WP_032002903.1\|3275894_3276125_-	hypothetical protein	NA	NA	NA	NA
WP_032002902.1\|3276124_3276448_-	hypothetical protein	NA	NA	NA	NA
WP_032002901.1\|3276514_3276694_-	hypothetical protein	NA	NA	NA	NA
WP_032002899.1\|3276788_3277013_-	hypothetical protein	NA	NA	NA	NA
WP_032002898.1\|3277009_3277327_-	hypothetical protein	A0A068CBJ8	Acinetobacter_phage	3.3e-08	45.6
WP_032002897.1\|3277328_3277631_-	hypothetical protein	A0A1B1P9J7	Acinetobacter_phage	3.9e-14	59.3
WP_032002895.1\|3277623_3277839_-	hypothetical protein	NA	NA	NA	NA
WP_032002893.1\|3277831_3278149_-	hypothetical protein	A0A1J0MGQ3	Acinetobacter_phage	4.9e-52	96.2
WP_001261846.1\|3278145_3278550_-	hypothetical protein	NA	NA	NA	NA
WP_032002892.1\|3278567_3278987_-	hypothetical protein	H2DE79	Erwinia_phage	4.2e-27	51.6
WP_001106885.1\|3278983_3279136_-	hypothetical protein	NA	NA	NA	NA
WP_017724812.1\|3279132_3279321_-	hypothetical protein	NA	NA	NA	NA
WP_032002891.1\|3279317_3280052_-	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	4.4e-64	52.4
WP_000128669.1\|3281013_3281949_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.3e-23	30.0
WP_001010537.1\|3281945_3282719_+	ABC transporter permease	NA	NA	NA	NA
WP_000110166.1\|3282715_3283528_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A126HHM5	Vibrio_phage	5.0e-40	37.2

DBSCAN-SWA_10

3328286 : 3343084

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000566785.1\|3328286_3328862_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	A0A0P0IKJ1	Acinetobacter_phage	1.2e-109	99.5
WP_000281148.1\|3331737_3334470_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	0.0e+00	98.2
WP_001982145.1\|3334825_3335875_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	9.8e-190	100.0
WP_000608310.1\|3335884_3336691_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	3.9e-146	99.3
WP_000066126.1\|3336700_3337396_+	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	5.8e-122	100.0
WP_001164242.1\|3337406_3338390_-	xanthine dehydrogenase accessory protein XdhC	A0A0P0IKN7	Acinetobacter_phage	2.9e-183	96.3
WP_001076827.1\|3338396_3340772_-	xanthine dehydrogenase molybdopterin binding subunit	A0A0P0I429	Acinetobacter_phage	0.0e+00	97.9
WP_000893694.1\|3340773_3342273_-	xanthine dehydrogenase small subunit	A0A0P0IVM8	Acinetobacter_phage	2.1e-278	97.0
WP_001187844.1\|3342535_3343084_+	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	1.7e-97	100.0

DBSCAN-SWA_11

3663126 : 3721320

uncultured_virus(25.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000722324.1\|3663126_3663843_+\|protease	metalloprotease	NA	NA	NA	NA
WP_000231479.1\|3665560_3666868_-	hypothetical protein	NA	NA	NA	NA
WP_010326927.1\|3667870_3668896_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_000526261.1\|3668966_3670469_-	cation:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	2.6e-18	32.2
WP_001267349.1\|3670706_3671606_-	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_000146247.1\|3671635_3672559_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_000072945.1\|3672766_3673780_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_094190431.1\|3673868_3674958_+\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_000114637.1\|3675383_3676274_-	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	2.9e-17	31.6
WP_001048573.1\|3676288_3677455_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_000082610.1\|3677602_3679036_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	9.4e-42	26.7
WP_000179879.1\|3679098_3680295_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
WP_000529161.1\|3680294_3683147_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_001986360.1\|3683137_3683272_+	hypothetical protein	NA	NA	NA	NA
WP_000086385.1\|3683705_3684416_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_000500957.1\|3684430_3686266_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA
WP_000833672.1\|3686278_3686644_-	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA
WP_001984863.1\|3686643_3687045_-	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA
WP_001287579.1\|3687999_3689274_+	citrate (Si)-synthase	NA	NA	NA	NA
WP_001981983.1\|3689343_3689829_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_000994655.1\|3689940_3690873_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_001274941.1\|3690996_3691521_-	YecA family protein	NA	NA	NA	NA
WP_000099358.1\|3691596_3691803_-	hypothetical protein	NA	NA	NA	NA
WP_001281941.1\|3692161_3694048_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.3e-38	33.3
WP_000887099.1\|3694145_3694433_+	DUF493 domain-containing protein	NA	NA	NA	NA
WP_000050856.1\|3694616_3695270_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_000626048.1\|3695350_3695884_+	hypothetical protein	NA	NA	NA	NA
WP_001118410.1\|3695885_3697070_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_000183443.1\|3697335_3698721_+	APC family permease	NA	NA	NA	NA
WP_000071875.1\|3698761_3699322_-	flavodoxin family protein	NA	NA	NA	NA
WP_001002019.1\|3699439_3699820_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000582212.1\|3699869_3700343_-\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_000350911.1\|3700419_3701793_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_000566834.1\|3701860_3703132_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.0e-96	54.9
WP_001177773.1\|3703250_3704039_-	DUF3298 domain-containing protein	NA	NA	NA	NA
WP_088766618.1\|3704166_3704814_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_000201632.1\|3705102_3705360_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_000271409.1\|3705378_3705690_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_000667118.1\|3705786_3706086_+	hypothetical protein	NA	NA	NA	NA
WP_000234081.1\|3706133_3707111_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_000547887.1\|3707125_3709186_+	site-specific recombinase	NA	NA	NA	NA
WP_001055585.1\|3709389_3709773_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000618091.1\|3709769_3710105_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_005080579.1\|3710179_3711763_+\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	7.2e-144	54.0
WP_094190431.1\|3712118_3713209_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_000986589.1\|3713709_3714960_+	multidrug efflux RND transporter periplasmic adaptor subunit AdeI	NA	NA	NA	NA
WP_000046678.1\|3714972_3718149_+	multidrug efflux RND transporter permease subunit AdeJ	NA	NA	NA	NA
WP_001174793.1\|3718148_3719603_+	multidrug efflux RND transporter outer membrane channel subunit AdeK	NA	NA	NA	NA
WP_005080579.1\|3719736_3721320_-\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	7.2e-144	54.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018677

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection