CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP017242	Rhizobium etli 8C-3 plasmid pRsp8C3a, complete sequence	0 crisprs	WYL,csa3,PrimPol	1
NZ_CP017243	Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence	0 crisprs	RT	1
NZ_CP017241	Rhizobium etli 8C-3, complete genome	0 crisprs	WYL,csa3,cas3,RT,c2c10_CAS-V-U3,DEDDh	5
NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	0 crisprs	csa3,DEDDh,RT	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

368682 : 397878

Stx2-converting_phage(16.67%)

transposase,integrase

attL 391211:391226|attR 398408:398423

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155774529.1\|368682_368934_+\|transposase	transposase	NA	NA	NA	NA
WP_155774520.1\|370112_370358_+	hypothetical protein	NA	NA	NA	NA
WP_155774521.1\|370890_372435_+	hypothetical protein	NA	NA	NA	NA
WP_074063633.1\|372528_373095_+	hypothetical protein	NA	NA	NA	NA
WP_074063634.1\|373475_373904_-	hypothetical protein	NA	NA	NA	NA
WP_074063572.1\|374633_375359_+	response regulator	NA	NA	NA	NA
WP_074063635.1\|375355_375826_+	hypothetical protein	NA	NA	NA	NA
WP_155774522.1\|376187_376493_+	DUF982 domain-containing protein	NA	NA	NA	NA
WP_074063707.1\|376594_377362_+	two pore domain potassium channel family protein	NA	NA	NA	NA
WP_074062276.1\|378372_379971_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.1e-70	33.3
WP_074062277.1\|380045_380390_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_074062278.1\|380386_380773_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_074063637.1\|380966_382058_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_155774523.1\|382371_382644_-	hypothetical protein	NA	NA	NA	NA
WP_081377189.1\|383308_384268_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_074063640.1\|384264_384567_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_155774524.1\|384516_385182_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-36	40.5
WP_074063641.1\|385964_386207_-	hypothetical protein	NA	NA	NA	NA
WP_074063642.1\|386982_387396_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_074063644.1\|389408_390332_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	2.7e-50	40.0
WP_074063708.1\|390346_390772_-	MerR family DNA-binding protein	NA	NA	NA	NA
391211:391226	attL	NA	NA	NA	NA
WP_074063645.1\|391481_393923_+	DEAD/DEAH box helicase	A0A2K9R7J3	Dishui_lake_phycodnavirus	6.3e-30	28.7
WP_024318408.1\|393959_394259_-	DUF736 domain-containing protein	NA	NA	NA	NA
WP_074063709.1\|394757_395966_+\|integrase	tyrosine-type recombinase/integrase	A0A1L4BKH1	Thermus_phage	1.6e-05	28.8
WP_074063646.1\|395959_396877_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_074063647.1\|396873_397878_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VH72	Gordonia_phage	3.6e-08	28.3
398408:398423	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP017241

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1392695 : 1477178

Sinorhizobium_phage(60.42%)

terminase,integrase,head,portal,protease,tail,capsid

attL 1392643:1392685|attR 1442624:1442666

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1392643:1392685	attL	NA	NA	NA	NA
WP_074060794.1\|1392695_1393853_-\|integrase	site-specific integrase	A0A076G7B8	Sinorhizobium_phage	7.1e-48	33.8
WP_074060795.1\|1393702_1394038_-	helix-turn-helix domain-containing protein	A0A076GCY6	Sinorhizobium_phage	1.4e-09	37.9
WP_074060797.1\|1394318_1395446_-	DNA polymerase III subunit beta	R9TRR6	Rhizobium_phage	2.2e-107	56.1
WP_074060798.1\|1395432_1395852_-	DUF4326 domain-containing protein	A0A291AUQ7	Sinorhizobium_phage	1.8e-17	38.9
WP_074060799.1\|1395854_1396808_-	DUF2303 family protein	R9TSA8	Rhizobium_phage	5.2e-97	58.7
WP_074060800.1\|1396837_1397179_-	hypothetical protein	R9TQI8	Rhizobium_phage	1.0e-31	64.2
WP_074060801.1\|1397197_1397707_-	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	2.7e-52	62.0
WP_074060802.1\|1397706_1398075_-	hypothetical protein	NA	NA	NA	NA
WP_074060803.1\|1398071_1398770_-	hypothetical protein	R9TQJ1	Rhizobium_phage	4.1e-59	55.0
WP_074060804.1\|1398769_1398985_-	hypothetical protein	NA	NA	NA	NA
WP_155774417.1\|1399059_1399263_-	hypothetical protein	NA	NA	NA	NA
WP_074060807.1\|1399670_1400303_-	LexA family transcriptional regulator	NA	NA	NA	NA
WP_081377039.1\|1400468_1400672_+	hypothetical protein	NA	NA	NA	NA
WP_074060809.1\|1400985_1401495_+	hypothetical protein	R9TQJ7	Rhizobium_phage	1.6e-20	42.4
WP_074060810.1\|1401499_1401721_+	hypothetical protein	NA	NA	NA	NA
WP_081377040.1\|1401684_1402236_+	hypothetical protein	NA	NA	NA	NA
WP_074060812.1\|1402288_1402723_+	hypothetical protein	NA	NA	NA	NA
WP_074060813.1\|1402722_1403250_+	hypothetical protein	NA	NA	NA	NA
WP_081377041.1\|1403253_1403757_+	hypothetical protein	R9TQK2	Rhizobium_phage	2.4e-13	40.0
WP_074060814.1\|1403750_1403954_+	hypothetical protein	NA	NA	NA	NA
WP_074063114.1\|1403980_1405807_+	DNA methyltransferase	A0A291AUL2	Sinorhizobium_phage	1.1e-247	69.6
WP_074060815.1\|1405803_1407033_+	hypothetical protein	R9TNC4	Rhizobium_phage	6.7e-113	54.3
WP_074060816.1\|1407041_1408865_+	DNA primase	G8DGC0	Emiliania_huxleyi_virus	1.1e-58	30.1
WP_074063115.1\|1409178_1409973_+	hypothetical protein	R9TRT9	Rhizobium_phage	3.3e-49	41.4
WP_074060817.1\|1410146_1410893_+	hypothetical protein	A0A291AUL1	Sinorhizobium_phage	1.5e-107	77.8
WP_074060818.1\|1411053_1411671_+	hypothetical protein	A0A291AUL0	Sinorhizobium_phage	3.0e-53	56.4
WP_074060819.1\|1411667_1413710_+\|terminase	terminase	A0A291AUK9	Sinorhizobium_phage	0.0e+00	83.3
WP_074060820.1\|1413719_1413956_+\|tail	phage tail protein	A0A291AUL5	Sinorhizobium_phage	9.6e-21	73.1
WP_074060821.1\|1413952_1415683_+\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	1.0e-268	77.7
WP_074060822.1\|1415679_1416570_+	S49 family peptidase	A0A291AUM2	Sinorhizobium_phage	1.3e-121	77.5
WP_074060823.1\|1416594_1417167_+	hypothetical protein	A0A291AUL6	Sinorhizobium_phage	1.7e-31	66.5
WP_074060824.1\|1417169_1417526_+\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	1.7e-40	76.3
WP_074060825.1\|1417554_1418586_+\|capsid	major capsid protein	A0A291AUL7	Sinorhizobium_phage	8.2e-165	80.6
WP_074060826.1\|1418651_1419083_+	hypothetical protein	A0A291AUM1	Sinorhizobium_phage	3.1e-09	34.9
WP_074060827.1\|1419082_1419442_+	hypothetical protein	A0A291AUL9	Sinorhizobium_phage	1.2e-22	54.7
WP_074060828.1\|1419443_1419743_+	hypothetical protein	A0A291AUM3	Sinorhizobium_phage	3.7e-17	45.7
WP_074060829.1\|1419744_1420209_+	hypothetical protein	A0A291AUM4	Sinorhizobium_phage	5.7e-49	64.7
WP_074060830.1\|1420241_1420652_+\|tail	phage tail protein	A0A291AUM5	Sinorhizobium_phage	3.1e-51	75.7
WP_074060831.1\|1420665_1421067_+	hypothetical protein	A0A291AUM7	Sinorhizobium_phage	4.2e-24	44.3
WP_155774477.1\|1421093_1421306_+\|tail	phage tail assembly chaperone	A0A291AUN4	Sinorhizobium_phage	3.2e-15	57.4
WP_074060832.1\|1421309_1421615_-	hypothetical protein	NA	NA	NA	NA
WP_074060833.1\|1421678_1423595_+\|tail	tail tape measure protein	A0A291AUM6	Sinorhizobium_phage	2.7e-121	41.5
WP_074060834.1\|1423594_1424254_+	hypothetical protein	A0A291AUM9	Sinorhizobium_phage	1.9e-61	58.0
WP_074060835.1\|1424243_1424825_+	DUF2163 domain-containing protein	A0A291AUM8	Sinorhizobium_phage	1.6e-69	67.0
WP_074060836.1\|1424821_1425226_+	hypothetical protein	A0A291AUN0	Sinorhizobium_phage	1.9e-37	59.0
WP_074060837.1\|1425231_1427682_+\|tail	phage tail protein	A0A291AUN1	Sinorhizobium_phage	2.5e-260	54.9
WP_074060838.1\|1427681_1429238_+	hypothetical protein	A0A2D2W219	Sinorhizobium_phage	7.2e-64	34.3
WP_074060839.1\|1429316_1431086_+\|tail	tail fiber domain-containing protein	A0A2L2R219	Sinorhizobium_phage	4.4e-49	29.1
WP_074060840.1\|1431264_1431765_+	TIGR02594 family protein	A0A0A1IUP1	Pseudomonas_phage	1.2e-33	44.2
WP_074060841.1\|1431754_1432042_+	hypothetical protein	NA	NA	NA	NA
WP_074060842.1\|1432038_1432509_+	hypothetical protein	NA	NA	NA	NA
WP_074060843.1\|1432607_1432958_+	DUF1515 domain-containing protein	A0A291AUW4	Sinorhizobium_phage	4.3e-33	64.1
WP_074060844.1\|1433170_1434061_-	hypothetical protein	NA	NA	NA	NA
WP_155774418.1\|1434445_1435633_-	hypothetical protein	NA	NA	NA	NA
WP_155774478.1\|1435641_1436355_-	SOS response-associated peptidase	A0A291AUP1	Sinorhizobium_phage	1.5e-37	39.2
WP_074060846.1\|1437044_1437275_+	hypothetical protein	NA	NA	NA	NA
WP_074060847.1\|1437329_1438376_+	ATP-dependent DNA ligase	A0A068CDF3	Rhizobium_phage	1.4e-140	71.4
WP_074060848.1\|1438413_1438929_-	hypothetical protein	NA	NA	NA	NA
WP_074060849.1\|1438955_1439240_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_074060850.1\|1439487_1439895_+	hypothetical protein	NA	NA	NA	NA
WP_074060851.1\|1440056_1440698_-	hypothetical protein	NA	NA	NA	NA
WP_074060852.1\|1441598_1441823_+	hypothetical protein	NA	NA	NA	NA
WP_074060853.1\|1441837_1442344_-	hypothetical protein	NA	NA	NA	NA
WP_074060854.1\|1443576_1443789_+	hypothetical protein	NA	NA	NA	NA
1442624:1442666	attR	NA	NA	NA	NA
WP_074060855.1\|1444019_1444313_-	DNA-binding protein	NA	NA	NA	NA
WP_074060856.1\|1444344_1445595_-	hypothetical protein	NA	NA	NA	NA
WP_074060857.1\|1445591_1447142_-	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA
WP_074060858.1\|1447188_1448370_-	glycosyltransferase	NA	NA	NA	NA
WP_022714777.1\|1448376_1448952_-	polysaccharide export protein	NA	NA	NA	NA
WP_074060859.1\|1449146_1451282_+	chain-length determining protein	NA	NA	NA	NA
WP_074060860.1\|1451282_1452506_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_074060861.1\|1452629_1452839_-	DUF2842 domain-containing protein	NA	NA	NA	NA
WP_074063118.1\|1452950_1454054_+	heme A synthase	NA	NA	NA	NA
WP_074060862.1\|1454075_1454867_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_074060863.1\|1454888_1455821_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_074060864.1\|1455870_1456851_-	agmatinase	NA	NA	NA	NA
WP_074060865.1\|1456936_1457728_-	phenylalanine 4-monooxygenase	NA	NA	NA	NA
WP_039844539.1\|1457879_1458341_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_022714787.1\|1458417_1458885_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_022714788.1\|1458887_1459352_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_074060866.1\|1459581_1460007_-	PaaI family thioesterase	NA	NA	NA	NA
WP_074060867.1\|1460081_1460912_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_074060868.1\|1461163_1462000_-	EamA family transporter	NA	NA	NA	NA
WP_074060870.1\|1462460_1462784_-	hypothetical protein	NA	NA	NA	NA
WP_074063119.1\|1462881_1463310_+	CoA-binding protein	NA	NA	NA	NA
WP_074060871.1\|1463413_1464697_+	O-acetylhomoserine aminocarboxypropyltransferase	A0A0B5JD48	Pandoravirus	3.8e-18	26.2
WP_074060872.1\|1464824_1465088_-	hypothetical protein	NA	NA	NA	NA
WP_074060873.1\|1465417_1466200_+	DUF1194 domain-containing protein	NA	NA	NA	NA
WP_074060874.1\|1466217_1467462_-	cytochrome P450	NA	NA	NA	NA
WP_074060875.1\|1467513_1468767_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	8.8e-12	36.6
WP_074060876.1\|1469134_1469764_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	6.1e-62	58.7
WP_022714809.1\|1470066_1471344_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.7e-132	57.6
WP_074060877.1\|1471743_1474161_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	2.0e-206	50.0
WP_074063120.1\|1474366_1474642_+	HU family DNA-binding protein	A0A172Q061	Acinetobacter_phage	4.6e-06	33.0
WP_132661245.1\|1474967_1477178_+	alkaline phosphatase	M4SLV1	Cyanophage	1.9e-81	44.1

DBSCAN-SWA_2

1744035 : 1756140

uncultured_Mediterranean_phage(90.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_132552647.1\|1744035_1744848_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.3e-35	37.3
WP_074061098.1\|1744847_1745561_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	7.4e-40	47.0
WP_022715359.1\|1745748_1745940_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	2.6e-08	69.8
WP_074061099.1\|1745990_1746641_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_074061100.1\|1746637_1747465_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	8.3e-51	45.3
WP_074061101.1\|1747566_1748850_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.5e-94	44.4
WP_074061102.1\|1748854_1749622_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	6.8e-23	29.6
WP_074061103.1\|1749628_1750282_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.1e-16	35.2
WP_074061104.1\|1750454_1752047_+	peptidoglycan DD-metalloendopeptidase family protein	I3PV24	Clostridium_phage	3.9e-12	30.8
WP_074061105.1\|1752123_1752996_-	ATP-binding protein	NA	NA	NA	NA
WP_022715367.1\|1753207_1753555_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	4.1e-12	40.2
WP_074061106.1\|1753599_1756140_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.5e-58	46.2

DBSCAN-SWA_3

1912774 : 1985164

uncultured_Mediterranean_phage(50.0%)

tRNA,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074061232.1\|1912774_1913503_+\|holin	phosphatidylcholine/phosphatidylserine synthase	NA	NA	NA	NA
WP_074061233.1\|1913512_1914493_+	quinone oxidoreductase	NA	NA	NA	NA
WP_155774482.1\|1914544_1916110_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	2.9e-20	28.2
WP_074061235.1\|1916099_1917197_+	ABC transporter permease	NA	NA	NA	NA
WP_074061236.1\|1917193_1918111_+	ABC transporter permease	NA	NA	NA	NA
WP_074061237.1\|1918159_1919233_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_074061238.1\|1919378_1920341_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_074061239.1\|1920457_1921981_+	sugar ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.4e-10	26.2
WP_074061240.1\|1921977_1922994_+	ABC transporter permease	NA	NA	NA	NA
WP_074061241.1\|1922990_1923959_+	sugar ABC transporter permease YjfF	NA	NA	NA	NA
WP_074061242.1\|1923970_1924723_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_074061243.1\|1924799_1926164_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	NA	NA	NA
WP_074061244.1\|1926258_1928085_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	1.1e-108	40.7
WP_074061245.1\|1928201_1928933_+	DUF502 domain-containing protein	NA	NA	NA	NA
WP_074061246.1\|1928888_1930994_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_074063155.1\|1931085_1931403_+	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA
WP_074061247.1\|1931399_1934906_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_074063156.1\|1934912_1935584_-	DsbA family oxidoreductase	NA	NA	NA	NA
WP_074061248.1\|1935681_1937484_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_074061249.1\|1937754_1938405_+	invasion associated locus B family protein	NA	NA	NA	NA
WP_022715579.1\|1938520_1938850_-	heat shock protein HspQ	NA	NA	NA	NA
WP_022715580.1\|1938999_1940409_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_003539626.1\|1940469_1940808_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_074061250.1\|1941153_1942629_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_074061251.1\|1942637_1943444_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_074061252.1\|1943491_1946416_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	61.7
WP_074061253.1\|1946666_1947182_+	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	5.9e-47	57.9
WP_074061254.1\|1947495_1948113_+	hypothetical protein	NA	NA	NA	NA
WP_081377056.1\|1948441_1949932_-	chromate efflux transporter	A0A219VHC2	Ochrobactrum_phage	2.0e-34	74.7
WP_074061256.1\|1949861_1950674_-	sulfurtransferase	NA	NA	NA	NA
WP_074061257.1\|1950816_1951449_-	MarC family protein	NA	NA	NA	NA
WP_074061258.1\|1951674_1954461_+	DNA gyrase subunit A	A0A1B1IVS2	uncultured_Mediterranean_phage	3.0e-76	42.4
WP_132552545.1\|1954807_1954993_-	hypothetical protein	NA	NA	NA	NA
WP_074063157.1\|1955461_1955956_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	4.2e-26	37.8
WP_074061259.1\|1955983_1956550_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.8e-41	52.0
WP_074061260.1\|1956574_1957084_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.2e-44	59.4
WP_074061261.1\|1957154_1958240_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_074061262.1\|1958236_1959367_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	6.3e-102	53.2
WP_074061263.1\|1959632_1960061_-	DUF4864 domain-containing protein	NA	NA	NA	NA
WP_074061264.1\|1960342_1961554_-	MFS transporter	NA	NA	NA	NA
WP_074061265.1\|1961906_1963415_+	adenylate cyclase	NA	NA	NA	NA
WP_074061266.1\|1963976_1964393_-	GFA family protein	NA	NA	NA	NA
WP_074061267.1\|1964440_1964905_-	polyketide cyclase	NA	NA	NA	NA
WP_074061268.1\|1964907_1965222_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_074063158.1\|1965547_1966579_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_074061269.1\|1967676_1968414_+	hypothetical protein	NA	NA	NA	NA
WP_074061271.1\|1969284_1969479_+	hypothetical protein	NA	NA	NA	NA
WP_074061272.1\|1969654_1969909_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA
WP_074061273.1\|1969905_1972164_-	cadmium-translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.5e-59	28.1
WP_074061274.1\|1972160_1972988_-	DUF2189 domain-containing protein	NA	NA	NA	NA
WP_074061275.1\|1973000_1973192_-	hypothetical protein	NA	NA	NA	NA
WP_074061276.1\|1973188_1974070_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA
WP_074061277.1\|1974060_1974231_-	cbb3-type cytochrome c oxidase subunit 3	NA	NA	NA	NA
WP_074061278.1\|1974248_1975001_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA
WP_074061279.1\|1975005_1976646_-	cytochrome-c oxidase, cbb3-type subunit I	NA	NA	NA	NA
WP_074061280.1\|1978274_1979447_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_074061281.1\|1979835_1980573_+	hypothetical protein	NA	NA	NA	NA
WP_074061282.1\|1980579_1981953_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_074061283.1\|1982245_1983637_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_074061284.1\|1984045_1985164_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

2224946 : 2268383

uncultured_Caudovirales_phage(15.38%)

terminase,integrase,head,protease,tRNA,tail,capsid

attL 2241630:2241646|attR 2266595:2266611

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074061480.1\|2224946_2225648_+\|protease	TIGR02281 family clan AA aspartic protease	NA	NA	NA	NA
WP_074061481.1\|2225859_2226183_+	winged helix-turn-helix transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	2.2e-07	43.3
WP_074061482.1\|2226179_2226611_+	polyketide cyclase	NA	NA	NA	NA
WP_074061483.1\|2226653_2226860_+	hypothetical protein	NA	NA	NA	NA
WP_074063193.1\|2226865_2227333_+	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_074061484.1\|2227362_2227791_+	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_074061485.1\|2227887_2228097_+	hypothetical protein	NA	NA	NA	NA
WP_074061486.1\|2228130_2228358_+	hypothetical protein	NA	NA	NA	NA
WP_074061487.1\|2228329_2229091_-	ABC transporter permease	NA	NA	NA	NA
WP_074061488.1\|2229087_2230014_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.5e-24	33.3
WP_074061489.1\|2230118_2230940_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_074061490.1\|2231267_2231618_-	glyoxalase	NA	NA	NA	NA
WP_074061491.1\|2231823_2232159_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_074061492.1\|2232420_2232864_+	SRPBCC family protein	NA	NA	NA	NA
WP_074061493.1\|2233042_2234332_-	extensin family protein	NA	NA	NA	NA
WP_074063194.1\|2234442_2236257_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	8.3e-11	48.9
WP_074061494.1\|2236553_2236940_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_074061495.1\|2236945_2237533_+	hypothetical protein	NA	NA	NA	NA
WP_074061496.1\|2237699_2238512_-	oxidoreductase	NA	NA	NA	NA
WP_132550576.1\|2239238_2239559_-	GYD domain-containing protein	NA	NA	NA	NA
WP_074061499.1\|2240144_2241557_+	DUF1254 domain-containing protein	M1H738	Paramecium_bursaria_Chlorella_virus	1.1e-87	41.2
2241630:2241646	attL	NA	NA	NA	NA
WP_074061500.1\|2241847_2242759_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_074063195.1\|2242913_2243612_+	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
WP_074061501.1\|2244054_2246061_+	ABC transporter ATP-binding protein/permease	G3M9Y6	Bacillus_virus	2.3e-14	30.2
WP_074061502.1\|2246150_2247323_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_074061503.1\|2247332_2248856_-	DUF1800 domain-containing protein	NA	NA	NA	NA
WP_074061504.1\|2248965_2249319_-	DMT family protein	NA	NA	NA	NA
WP_074061505.1\|2249460_2249844_-	YciI family protein	NA	NA	NA	NA
WP_132660716.1\|2250288_2250663_-	hypothetical protein	NA	NA	NA	NA
WP_074063196.1\|2250821_2252072_-	MFS transporter	NA	NA	NA	NA
WP_074061507.1\|2252257_2252917_-	dihydrofolate reductase	NA	NA	NA	NA
WP_074063197.1\|2253138_2256198_+	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_132550195.1\|2256467_2257097_-	J domain-containing protein	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	2.4e-10	53.3
WP_018900054.1\|2257843_2258056_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.3e-12	57.1
WP_081377062.1\|2258121_2259084_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_074061508.1\|2259256_2260354_+\|integrase	tyrosine-type recombinase/integrase	I6NSG1	Burkholderia_phage	1.7e-104	53.2
WP_074061509.1\|2260485_2260710_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_074061510.1\|2260730_2260982_+	hypothetical protein	NA	NA	NA	NA
WP_074061511.1\|2260962_2262651_+	AAA family ATPase	B4UTY9	Rhizobium_phage	3.3e-94	53.1
WP_081377063.1\|2262799_2263258_+	hypothetical protein	A0A2I7QUD6	Vibrio_phage	1.8e-10	45.7
WP_081377064.1\|2263248_2264895_+\|terminase	terminase large subunit	Q9MCV7	Escherichia_phage	1.1e-91	40.9
WP_074061513.1\|2264908_2265121_+	hypothetical protein	NA	NA	NA	NA
WP_074061514.1\|2265893_2266325_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_074061515.1\|2266411_2267566_+\|capsid	phage major capsid protein	K7XS73	uncultured_Mediterranean_phage	1.7e-33	30.6
2266595:2266611	attR	NA	NA	NA	NA
WP_074061516.1\|2267565_2267844_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_074063201.1\|2267843_2268383_+\|head,protease	HK97 family phage prohead protease	A0A1B2APW1	Phage_Wrath	5.4e-27	42.1

DBSCAN-SWA_5

3290957 : 3329845

Ochrobactrum_phage(38.71%)

integrase,tail,transposase

attL 3287063:3287078|attR 3321984:3321999

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3287063:3287078	attL	NA	NA	NA	NA
WP_074061219.1\|3290957_3292472_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_074062312.1\|3292738_3292954_+	hypothetical protein	NA	NA	NA	NA
WP_081377108.1\|3293149_3294181_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_074062313.1\|3294983_3295481_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_074062314.1\|3295640_3295946_+	transcriptional regulator	NA	NA	NA	NA
WP_074062315.1\|3296247_3296604_+	hypothetical protein	A0A219VHC3	Ochrobactrum_phage	3.7e-24	52.2
WP_074062316.1\|3296603_3297470_+	chromosome partitioning protein ParB	A0A219VHB6	Ochrobactrum_phage	3.5e-68	54.3
WP_074062317.1\|3297459_3297921_+	hypothetical protein	A0A219VHC5	Ochrobactrum_phage	4.3e-41	53.3
WP_074062318.1\|3297917_3299996_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A219VHD4	Ochrobactrum_phage	6.7e-174	62.7
WP_074062319.1\|3300020_3301046_+	AAA family ATPase	A0A219VHC7	Ochrobactrum_phage	4.3e-97	54.5
WP_074062320.1\|3301042_3301327_+	hypothetical protein	NA	NA	NA	NA
WP_074062321.1\|3301323_3301623_+	hypothetical protein	NA	NA	NA	NA
WP_074062322.1\|3301619_3301910_+	hypothetical protein	NA	NA	NA	NA
WP_074062323.1\|3301917_3302571_+	DUF3164 family protein	A0A1B0T6L8	Pelagibaca_phage	1.8e-69	61.7
WP_155774466.1\|3302617_3303382_-	hypothetical protein	NA	NA	NA	NA
WP_074062325.1\|3303403_3304054_+	regulatory protein GemA	M4STB3	Rhodobacter_phage	2.3e-48	48.1
WP_074062326.1\|3304050_3304287_+	hypothetical protein	A0A219VHD0	Ochrobactrum_phage	6.7e-14	64.6
WP_074062327.1\|3304279_3304474_+	hypothetical protein	NA	NA	NA	NA
WP_074062328.1\|3304470_3304869_+	hypothetical protein	NA	NA	NA	NA
WP_074062329.1\|3304974_3305691_+	TIGR02594 family protein	A0A0A1IUP1	Pseudomonas_phage	2.2e-23	38.3
WP_074062330.1\|3305680_3305953_+	hypothetical protein	A0A219VHD7	Ochrobactrum_phage	6.1e-11	40.7
WP_074062331.1\|3305952_3306312_+	hypothetical protein	A0A068CE23	Rhizobium_phage	3.9e-37	74.1
WP_081377109.1\|3306325_3306526_+	hypothetical protein	A0A068C9B4	Rhizobium_phage	9.3e-17	74.2
WP_074062332.1\|3306522_3306744_+	hypothetical protein	A0A219VHE0	Ochrobactrum_phage	3.4e-12	56.9
WP_074062333.1\|3306743_3307106_+	DUF2730 family protein	NA	NA	NA	NA
WP_074062334.1\|3307102_3307402_+	hypothetical protein	M4SPS4	Rhodobacter_phage	2.7e-12	37.2
WP_074062335.1\|3307403_3307994_+	DUF3486 family protein	M4SNU5	Rhodobacter_phage	1.6e-48	56.8
WP_074062336.1\|3307990_3309604_+	hypothetical protein	M4SRU6	Rhodobacter_phage	4.5e-202	65.0
WP_081377110.1\|3309597_3311232_+	DUF935 domain-containing protein	A0A219VH73	Ochrobactrum_phage	8.8e-113	43.9
WP_074062337.1\|3311235_3312459_+	hypothetical protein	A0A219VH74	Ochrobactrum_phage	1.9e-72	38.4
WP_074062338.1\|3312647_3313274_-	hypothetical protein	NA	NA	NA	NA
WP_074062339.1\|3313278_3314325_-	DUF262 domain-containing protein	A0A0M4RT01	Citrobacter_phage	1.2e-06	26.6
WP_074062340.1\|3314376_3314808_-	hypothetical protein	R9TRP2	Rhizobium_phage	1.8e-12	34.4
WP_074062341.1\|3315053_3316073_+	hypothetical protein	M4SNT6	Rhodobacter_phage	3.4e-14	32.6
WP_074062342.1\|3316100_3316502_+	hypothetical protein	A0A0M4TU84	Ralstonia_phage	1.2e-18	44.4
WP_074062343.1\|3316529_3317426_+	hypothetical protein	M4SRT6	Rhodobacter_phage	3.0e-70	46.4
WP_074062344.1\|3317536_3317788_+	hypothetical protein	NA	NA	NA	NA
WP_074062345.1\|3317852_3318311_+	DUF1320 domain-containing protein	NA	NA	NA	NA
WP_074062346.1\|3318307_3318787_+	phage morphogenesis protein	M4MB67	Vibrio_phage	7.5e-12	34.7
WP_074062347.1\|3318783_3319413_+	hypothetical protein	NA	NA	NA	NA
WP_074062348.1\|3319405_3319945_+	hypothetical protein	A0A219VHA3	Ochrobactrum_phage	2.0e-21	37.0
WP_074062349.1\|3319954_3320164_+	hypothetical protein	NA	NA	NA	NA
WP_074062350.1\|3320183_3320579_+\|integrase	integrase	NA	NA	NA	NA
WP_081377111.1\|3320575_3321451_+	hypothetical protein	A0A219VH98	Ochrobactrum_phage	1.0e-43	41.4
WP_074062351.1\|3321450_3322575_+	hypothetical protein	K4I1F8	Acidithiobacillus_phage	4.3e-18	34.6
3321984:3321999	attR	NA	NA	NA	NA
WP_074062352.1\|3322574_3325790_+	DUF4815 domain-containing protein	K4ICQ5	Acidithiobacillus_phage	2.9e-152	34.1
WP_074062353.1\|3325799_3326735_+	hypothetical protein	S5YL43	Mycobacterium_phage	6.8e-17	58.6
WP_081377113.1\|3326662_3327298_+	DUF4376 domain-containing protein	A0A2L0V114	Agrobacterium_phage	1.3e-40	69.2
WP_074062355.1\|3327446_3328703_+\|tail	phage tail protein	R4JDM4	Burkholderia_phage	1.7e-10	24.1
WP_074062356.1\|3328713_3329259_+	hypothetical protein	NA	NA	NA	NA
WP_074062357.1\|3329353_3329845_+\|tail	phage tail assembly protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP017243

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

222730 : 268543

Stx2-converting_phage(100.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004680429.1\|222730_223957_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004680428.1\|223920_225807_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004680427.1\|225806_226310_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004680426.1\|226396_226930_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004680425.1\|227045_228533_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004680424.1\|228535_229090_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004680423.1\|229125_230118_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_074063719.1\|231853_234568_-	hypothetical protein	NA	NA	NA	NA
WP_004678823.1\|236486_237842_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_018247169.1\|237903_239070_+	FHA domain-containing protein	NA	NA	NA	NA
WP_004678820.1\|239069_240359_+	type VI secretion system protein TssL	NA	NA	NA	NA
WP_004678817.1\|240368_243974_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004678816.1\|244059_244248_+	hypothetical protein	NA	NA	NA	NA
WP_004678814.1\|244270_245887_+	hypothetical protein	NA	NA	NA	NA
WP_004678812.1\|246065_246233_+	hypothetical protein	NA	NA	NA	NA
WP_037117783.1\|247373_247583_+	hypothetical protein	NA	NA	NA	NA
WP_018247171.1\|247579_248590_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_074063735.1\|248501_249329_-	radical SAM protein	NA	NA	NA	NA
WP_010032001.1\|249653_249857_-	nif-specific regulatory protein,nifA	NA	NA	NA	NA
WP_004678802.1\|250555_251443_-	hypothetical protein	NA	NA	NA	NA
WP_074063720.1\|252842_255521_+	hypothetical protein	NA	NA	NA	NA
WP_074063721.1\|256648_259117_+	hypothetical protein	NA	NA	NA	NA
WP_026188840.1\|259799_261215_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004675971.1\|266345_266735_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_018247174.1\|266731_267085_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_004675973.1\|267154_268543_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.6e-81	38.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP017242

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP017241

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP017243

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection