CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018575	Bacillus altitudinis strain GLB197 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP018574	Bacillus altitudinis strain GLB197 chromosome, complete genome	0 crisprs	csa3,RT,cas3,WYL,DEDDh,DinG	0	0	10	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

215881 : 225777

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074041660.1\|215881_217420_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.0e-75	51.5
WP_008344288.1\|217435_218005_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.9e-31	39.5
WP_017366751.1\|218001_219042_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.1e-65	43.8
WP_008344290.1\|219138_220569_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.3e-51	32.9
WP_008344291.1\|220544_222776_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	2.9e-159	42.0
WP_017359821.1\|222759_223443_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003214349.1\|223439_223694_-	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	1.6e-05	34.6
WP_025206862.1\|223686_224409_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	2.4e-46	43.7
WP_017359822.1\|224481_225777_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	6.5e-18	26.9

DBSCAN-SWA_2

640095 : 669632

Tupanvirus(25.0%)

bacteriocin,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074041742.1\|640095_641529_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	1.2e-102	41.6
WP_017358723.1\|641704_641881_+	hypothetical protein	NA	NA	NA	NA
WP_060832026.1\|641933_642710_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_008343881.1\|642768_642999_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_060832025.1\|643033_644161_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_060832024.1\|644176_644737_-	hypothetical protein	NA	NA	NA	NA
WP_060832023.1\|644789_645146_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_060832022.1\|645160_645643_-	hypothetical protein	NA	NA	NA	NA
WP_003217059.1\|645768_646029_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA
WP_017366510.1\|646151_646616_-	DMT family transporter	NA	NA	NA	NA
WP_008343887.1\|646629_647058_-	DMT family transporter	NA	NA	NA	NA
WP_008343888.1\|647141_647456_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_017366508.1\|647574_648081_+	hypothetical protein	NA	NA	NA	NA
WP_008359338.1\|648441_649278_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_060832021.1\|649381_650614_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_074041743.1\|650772_650967_+	DUF255 domain-containing protein	NA	NA	NA	NA
WP_060832020.1\|651055_652807_-\|protease	trypsin-like serine protease	A0A1B1IRH0	uncultured_Mediterranean_phage	1.2e-11	33.1
WP_060832019.1\|653109_655173_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_060832018.1\|655325_656096_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_008343899.1\|656314_657649_+	glycerol-3-phosphate transporter	NA	NA	NA	NA
WP_060832017.1\|657741_658623_+	glycerophosphodiester phosphodiesterase	I6XE30	Staphylococcus_phage	4.0e-43	39.3
WP_060832016.1\|658661_660050_-	amino acid permease	NA	NA	NA	NA
WP_060832015.1\|660269_661028_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_060832014.1\|661055_661727_-	hypothetical protein	NA	NA	NA	NA
WP_046342507.1\|661755_662388_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_060832013.1\|662515_663406_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_074041745.1\|663511_664459_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_017366494.1\|664514_664814_-	hypothetical protein	NA	NA	NA	NA
WP_017358703.1\|664810_665029_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_008343909.1\|665213_665819_-	ABC-2 transporter permease	NA	NA	NA	NA
WP_074041746.1\|665802_666678_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.9e-17	28.5
WP_008343911.1\|666683_667055_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_060832010.1\|667228_668356_-	DUF418 domain-containing protein	NA	NA	NA	NA
WP_035390638.1\|668730_668880_+\|bacteriocin	aureocin A53 family class IId bacteriocin	NA	NA	NA	NA
WP_035390639.1\|668922_669072_+\|bacteriocin	aureocin A53 family class IId bacteriocin	NA	NA	NA	NA
WP_035390639.1\|669114_669264_+\|bacteriocin	aureocin A53 family class IId bacteriocin	NA	NA	NA	NA
WP_017358896.1\|669307_669457_+\|bacteriocin	aureocin A53 family class IId bacteriocin	NA	NA	NA	NA
WP_017358895.1\|669482_669632_+\|bacteriocin	aureocin A53 family class IId bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_3

851779 : 860653

Clostridium_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008342013.1\|851779_853492_-	DNA polymerase III subunit gamma/tau	D9ZNI9	Clostridium_phage	6.8e-55	34.4
WP_008342015.1\|854163_854640_-	nucleoside deaminase	NA	NA	NA	NA
WP_074041758.1\|854719_855274_+	cysteine hydrolase	NA	NA	NA	NA
WP_074041759.1\|855319_856621_+	LysM peptidoglycan-binding domain-containing protein	A0A2P1CIG4	Microbacterium_phage	1.4e-07	34.8
WP_017366700.1\|856700_857324_+	deoxynucleoside kinase	A0A1G5SAJ8	Enterococcus_phage	2.0e-12	28.8
WP_024719578.1\|857320_857980_+	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	1.1e-21	33.2
WP_008342025.1\|858449_859277_-	chemotaxis sensory transducer	A0A2H4J162	uncultured_Caudovirales_phage	7.1e-10	54.4
WP_008342028.1\|859378_860653_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.7e-95	50.1

DBSCAN-SWA_4

1129105 : 1178707

Tupanvirus(25.0%)

lysis,holin,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007497850.1\|1129105_1129786_-\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_008345527.1\|1129779_1130163_-\|holin	CidA/LrgA family holin-like protein	NA	NA	NA	NA
WP_008345526.1\|1130328_1131216_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_074041777.1\|1131233_1132058_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_047946593.1\|1132044_1132734_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_008345523.1\|1132847_1133222_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_060781543.1\|1133571_1133910_-	DUF4288 domain-containing protein	NA	NA	NA	NA
WP_017360150.1\|1134204_1135743_-	cation acetate symporter	NA	NA	NA	NA
WP_017360149.1\|1135739_1136054_-	DUF485 domain-containing protein	NA	NA	NA	NA
WP_046526772.1\|1136161_1136830_-	streptomycin biosynthesis protein StrF	NA	NA	NA	NA
WP_017368290.1\|1136822_1137512_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_008345506.1\|1137810_1137951_-	DNA-binding anti-repressor SinI	NA	NA	NA	NA
WP_008345504.1\|1138361_1138793_+	GtrA family protein	NA	NA	NA	NA
WP_008345502.1\|1138819_1139077_+	hypothetical protein	NA	NA	NA	NA
WP_035389881.1\|1139111_1139957_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_081091419.1\|1140132_1141317_+	galactokinase	NA	NA	NA	NA
WP_024719494.1\|1141316_1142309_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	3.1e-52	37.7
WP_060832747.1\|1142340_1143861_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_008345497.1\|1143868_1144951_+	M24 family metallopeptidase	NA	NA	NA	NA
WP_089374137.1\|1145465_1146422_+	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA
WP_008345496.1\|1146449_1148408_+	cytochrome aa3 quinol oxidase subunit I	NA	NA	NA	NA
WP_008359616.1\|1148407_1149025_+	cytochrome aa3 quinol oxidase subunit III	NA	NA	NA	NA
WP_007497818.1\|1149026_1149407_+	cytochrome aa3 quinol oxidase subunit IV	NA	NA	NA	NA
WP_008345491.1\|1149484_1149748_-	hypothetical protein	NA	NA	NA	NA
WP_008345489.1\|1150225_1151437_+	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
WP_060832746.1\|1151547_1152297_+	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA
WP_081091418.1\|1152354_1153356_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_017368281.1\|1153367_1153595_-	hypothetical protein	NA	NA	NA	NA
WP_050826727.1\|1153676_1156100_-	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	1.8e-21	38.6
WP_048002996.1\|1156599_1156878_+	hypothetical protein	NA	NA	NA	NA
WP_026050173.1\|1156929_1157763_+	PRD domain-containing protein	NA	NA	NA	NA
WP_050826725.1\|1158019_1159408_+	PTS sucrose transporter subunit IIBC	NA	NA	NA	NA
WP_050826724.1\|1159427_1160885_+	sucrose-6-phosphate hydrolase	NA	NA	NA	NA
WP_008359596.1\|1161072_1161327_+	hypothetical protein	NA	NA	NA	NA
WP_074041778.1\|1161481_1162558_+	peptidase	NA	NA	NA	NA
WP_008343648.1\|1162603_1163413_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_074041779.1\|1163539_1163845_-	general stress protein 17m	NA	NA	NA	NA
WP_074041780.1\|1163972_1164800_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_017360124.1\|1164796_1165483_+	uracil-DNA glycosylase	A0A0B5IW78	Pandoravirus	5.5e-48	49.3
WP_074041781.1\|1165509_1166868_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_008343634.1\|1167040_1167373_+	YwdI family protein	NA	NA	NA	NA
WP_007497786.1\|1167406_1168717_+	purine pyrimidine permease	NA	NA	NA	NA
WP_056704127.1\|1168784_1169156_+	DUF423 domain-containing protein	NA	NA	NA	NA
WP_074041782.1\|1169196_1169814_-	cupin domain-containing protein	NA	NA	NA	NA
WP_007497781.1\|1169945_1170488_-\|coat	spore coat protein GerQ	NA	NA	NA	NA
WP_007497779.1\|1170711_1171386_-	hypothetical protein	NA	NA	NA	NA
WP_017360119.1\|1171561_1172332_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_074041783.1\|1172338_1173751_+\|coat	spore coat protein	NA	NA	NA	NA
WP_074041784.1\|1173772_1174951_+	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
WP_074041785.1\|1174947_1175823_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_060832738.1\|1175824_1176952_+\|coat	spore coat protein	A0A1B1IVE2	uncultured_Mediterranean_phage	1.0e-22	29.9
WP_048001140.1\|1176941_1177682_+	glycosyltransferase family protein	NA	NA	NA	NA
WP_060832737.1\|1177678_1178707_+\|coat	spore coat protein	NA	NA	NA	NA

DBSCAN-SWA_5

1477524 : 1525243

Bacillus_phage(37.84%)

integrase

attL 1468125:1468140|attR 1525438:1525453

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1468125:1468140	attL	NA	NA	NA	NA
WP_017357905.1\|1477524_1478901_+	C40 family peptidase	A0A0A0RVE6	Bacillus_phage	1.1e-26	54.3
WP_024719880.1\|1479135_1480086_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	4.8e-87	53.1
WP_008348133.1\|1480443_1480908_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_025208027.1\|1480947_1481835_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	4.3e-05	26.3
WP_008348128.1\|1481835_1482795_+	YvcK family protein	A1IMD5	Streptococcus_phage	3.2e-62	40.4
WP_008348125.1\|1482812_1483763_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	4.3e-51	38.1
WP_008348124.1\|1483789_1484047_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_074041818.1\|1484085_1484829_+	arylamine N-acetyltransferase	NA	NA	NA	NA
WP_008348122.1\|1484881_1485370_-	ribonuclease	NA	NA	NA	NA
WP_008348120.1\|1485550_1486528_-	D-glycerate dehydrogenase	M1HTA3	Paramecium_bursaria_Chlorella_virus	6.4e-18	26.9
WP_025208023.1\|1487091_1487673_+	carbonic anhydrase	NA	NA	NA	NA
WP_035389606.1\|1487710_1489333_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	3.3e-43	27.4
WP_008347798.1\|1489563_1489905_-	hypothetical protein	NA	NA	NA	NA
WP_074041819.1\|1490041_1490620_+	TIGR00730 family Rossman fold protein	A0A1V0S9E9	Catovirus	3.1e-12	29.2
WP_007500118.1\|1490675_1491272_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	7.5e-54	54.4
WP_081375103.1\|1491784_1492771_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LA05	Escherichia_phage	2.6e-11	25.0
WP_035389600.1\|1492936_1493140_+	hypothetical protein	A0A076G778	Bacillus_phage	4.3e-09	45.2
WP_074041820.1\|1493136_1493514_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_074041821.1\|1493870_1494206_+	hypothetical protein	A0A143FNF4	Bacillus_phage	2.8e-05	32.6
WP_164071358.1\|1494354_1494528_+	hypothetical protein	NA	NA	NA	NA
WP_074041822.1\|1494524_1494752_+	hypothetical protein	NA	NA	NA	NA
WP_074041823.1\|1494748_1495024_+	hypothetical protein	NA	NA	NA	NA
WP_074041824.1\|1495023_1495254_+	hypothetical protein	NA	NA	NA	NA
WP_074041825.1\|1495266_1495629_+	hypothetical protein	NA	NA	NA	NA
WP_074041826.1\|1495630_1496440_+	hypothetical protein	A0A0N9RTN7	Paenibacillus_phage	1.9e-28	36.2
WP_074041827.1\|1496436_1496649_+	hypothetical protein	U5Q038	Bacillus_phage	3.1e-18	64.7
WP_074041828.1\|1496669_1497431_+	ATP-binding protein	A0A0N7GFF0	Paenibacillus_phage	1.1e-76	57.5
WP_074041829.1\|1497430_1497787_+	DUF2493 domain-containing protein	A0A0S2MWK3	Cellulophaga_phage	8.8e-34	58.5
WP_074041830.1\|1497803_1498454_+	hypothetical protein	NA	NA	NA	NA
WP_074041831.1\|1498450_1499827_+	DNA helicase	A0A2H4IZL9	uncultured_Caudovirales_phage	4.4e-113	49.3
WP_074041832.1\|1499938_1500940_+	DNA primase	A0A2H4J6E6	uncultured_Caudovirales_phage	1.1e-60	42.6
WP_074042143.1\|1500936_1501173_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_035389583.1\|1501594_1502782_+	hypothetical protein	A0A0U3TNF6	Bacillus_phage	1.4e-54	33.1
WP_074041834.1\|1503065_1503596_+	hypothetical protein	NA	NA	NA	NA
WP_164071359.1\|1503730_1503874_+	hypothetical protein	NA	NA	NA	NA
WP_074041835.1\|1503870_1504395_+	hypothetical protein	NA	NA	NA	NA
WP_074041836.1\|1504644_1505427_+	hypothetical protein	NA	NA	NA	NA
WP_074041837.1\|1505440_1505692_+	hypothetical protein	NA	NA	NA	NA
WP_035389574.1\|1505691_1506126_+	hypothetical protein	A0A0N9RZF9	Paenibacillus_phage	5.4e-25	45.6
WP_074041838.1\|1506126_1506837_+	hypothetical protein	A0A0N9SIQ5	Paenibacillus_phage	2.2e-12	29.5
WP_074041839.1\|1506884_1509119_+	DNA polymerase I	A0A2H4J6W7	uncultured_Caudovirales_phage	4.0e-164	47.9
WP_074041840.1\|1509119_1510169_+	hypothetical protein	A0A0N9SHN6	Paenibacillus_phage	2.5e-76	53.4
WP_074041841.1\|1510168_1510366_+	hypothetical protein	NA	NA	NA	NA
WP_074041842.1\|1510362_1510899_+	hypothetical protein	A0A0N9ST03	Paenibacillus_phage	4.9e-12	46.7
WP_074041843.1\|1510899_1511124_+	hypothetical protein	NA	NA	NA	NA
WP_074041844.1\|1511116_1511509_+	hypothetical protein	A0A1I9S6I9	Bacillus_phage	9.8e-10	37.5
WP_081375106.1\|1511511_1511952_+	hypothetical protein	NA	NA	NA	NA
WP_164071360.1\|1511948_1512119_+	hypothetical protein	NA	NA	NA	NA
WP_164071361.1\|1512115_1512280_+	hypothetical protein	NA	NA	NA	NA
WP_074041845.1\|1512276_1512633_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	1.6e-27	50.8
WP_074042145.1\|1512662_1513340_+	ribonucleotide-diphosphate reductase subunit alpha	A0A1P8CX40	Bacillus_phage	1.2e-100	80.0
WP_074041846.1\|1513435_1513963_+	HNH endonuclease	L0LCB9	Bacillus_phage	3.5e-71	71.4
WP_074041849.1\|1515824_1516796_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4JMU8	Bacillus_phage	5.4e-142	76.7
WP_074041850.1\|1517790_1518171_+	hypothetical protein	W6MWX7	Pseudomonas_phage	1.5e-31	58.1
WP_074041851.1\|1518167_1518638_+	dUTP diphosphatase	D2XR49	Bacillus_phage	1.0e-37	54.8
WP_074042146.1\|1519124_1519916_+	FAD-dependent thymidylate synthase	A0A142F1S2	Bacillus_phage	3.5e-83	63.3
WP_074041855.1\|1520717_1521575_+	hypothetical protein	A0A1P8CWY7	Bacillus_phage	1.8e-24	47.1
WP_074041856.1\|1521571_1522132_+	hypothetical protein	A0A1X9SFX7	Bacillus_phage	7.6e-24	37.4
WP_074041857.1\|1522110_1522485_-	hypothetical protein	NA	NA	NA	NA
WP_123766732.1\|1522562_1523312_+	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	2.8e-53	49.8
WP_074041858.1\|1523311_1523686_+	DUF134 domain-containing protein	A0A0N9RZI0	Paenibacillus_phage	1.2e-12	43.0
WP_074041860.1\|1523903_1524392_+	hypothetical protein	NA	NA	NA	NA
WP_074041861.1\|1524433_1525243_+	hypothetical protein	A0A0N9S810	Paenibacillus_phage	1.9e-68	55.3
1525438:1525453	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1529944 : 1552194

Bacillus_phage(31.58%)

tail,terminase,capsid,portal,integrase,holin,plate

attL 1526833:1526849|attR 1530534:1530550

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1526833:1526849	attL	NA	NA	NA	NA
WP_074041868.1\|1529944_1530490_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J6I5	uncultured_Caudovirales_phage	2.5e-27	43.6
WP_074041869.1\|1530591_1532358_+\|terminase	phage terminase large subunit	A0A142F1L6	Bacillus_phage	9.8e-134	44.6
1530534:1530550	attR	NA	NA	NA	NA
WP_035389511.1\|1532375_1532801_+	hypothetical protein	NA	NA	NA	NA
WP_035389509.1\|1532804_1534406_+\|portal	phage portal protein	A0A2H4J180	uncultured_Caudovirales_phage	5.9e-170	58.8
WP_074041870.1\|1534405_1535236_+\|capsid	minor capsid protein	A0A0N9SJR1	Paenibacillus_phage	1.2e-73	52.4
WP_074041872.1\|1536042_1537134_+	DUF5309 family protein	A0A2H4J2M3	uncultured_Caudovirales_phage	2.4e-114	59.4
WP_074041873.1\|1537189_1537411_+	hypothetical protein	NA	NA	NA	NA
WP_074041874.1\|1537426_1537813_+	hypothetical protein	NA	NA	NA	NA
WP_074041875.1\|1537813_1538152_+	hypothetical protein	A0A2H4J6J5	uncultured_Caudovirales_phage	7.1e-09	34.2
WP_035389495.1\|1538148_1538559_+	hypothetical protein	A0A0N9SJT1	Paenibacillus_phage	7.5e-29	49.6
WP_074041877.1\|1538974_1539517_+	hypothetical protein	A0A0N9SHI3	Paenibacillus_phage	3.8e-52	59.8
WP_035389491.1\|1539573_1539957_+	hypothetical protein	NA	NA	NA	NA
WP_081375108.1\|1540286_1543091_+\|tail	phage tail tape measure protein	A0A0N9SJR9	Paenibacillus_phage	5.4e-94	37.2
WP_074041878.1\|1543106_1544534_+\|tail	phage tail protein	A0A0B5CTY7	Listeria_phage	2.8e-38	35.2
WP_074041879.1\|1544545_1545937_+	endopeptidase	A6M966	Geobacillus_virus	2.2e-40	32.3
WP_074041880.1\|1545949_1547830_+	right-handed parallel beta-helix repeat-containing protein	A0A0K1Y5U2	Streptomyces_phage	1.6e-36	31.1
WP_074041881.1\|1547844_1549278_+\|plate	phage baseplate upper protein	M4ZRP1	Bacillus_phage	2.5e-50	53.2
WP_035389484.1\|1549289_1549577_+	hypothetical protein	M4ZR44	Bacillus_phage	6.5e-11	39.8
WP_074041882.1\|1549576_1549717_+	XkdX family protein	E2ELK1	Clostridium_phage	1.2e-05	54.8
WP_047204067.1\|1549749_1550061_+	hypothetical protein	NA	NA	NA	NA
WP_074041883.1\|1550086_1550926_+	N-acetylmuramoyl-L-alanine amidase	A0A218KC88	Bacillus_phage	3.6e-62	66.7
WP_074041884.1\|1550922_1551162_+\|holin	phage holin	A0A1D6Z272	Staphylococcus_phage	3.2e-11	52.3
WP_074041885.1\|1551251_1551575_+	hypothetical protein	NA	NA	NA	NA
WP_081375109.1\|1551528_1551939_-	YolD-like family protein	O64030	Bacillus_phage	2.7e-10	34.4
WP_074041886.1\|1551990_1552194_-	helix-turn-helix transcriptional regulator	A0A0A0RMC4	Bacillus_phage	3.6e-08	40.3

DBSCAN-SWA_7

1859908 : 1887386

uncultured_Caudovirales_phage(26.92%)

tail,terminase,capsid,portal,holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007500560.1\|1859908_1860286_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	1.6e-17	45.4
WP_017358976.1\|1860446_1860686_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_164071363.1\|1860704_1860857_+	hypothetical protein	A0A2H4J4L6	uncultured_Caudovirales_phage	3.0e-07	62.2
WP_008344132.1\|1860846_1861029_+	hypothetical protein	NA	NA	NA	NA
WP_017358980.1\|1861131_1861536_+	hypothetical protein	NA	NA	NA	NA
WP_008344129.1\|1861532_1861739_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	9.0e-15	68.5
WP_024719695.1\|1861863_1862382_+	sigma-70 family RNA polymerase sigma factor	A0A2H4J6J3	uncultured_Caudovirales_phage	2.0e-34	46.9
WP_008344125.1\|1862534_1863182_+\|terminase	terminase	A0A2P1JTW4	Anoxybacillus_phage	2.5e-42	43.7
WP_164071370.1\|1863190_1864492_+\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	1.0e-151	62.3
WP_041091936.1\|1864488_1865946_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	1.9e-138	53.0
WP_025207874.1\|1865980_1867072_+\|terminase	terminase	A0A1B1P7E4	Bacillus_phage	3.1e-61	40.9
WP_017358986.1\|1867094_1868018_+\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	5.2e-110	64.6
WP_007500574.1\|1868031_1868415_+	DUF3199 family protein	NA	NA	NA	NA
WP_060832590.1\|1868411_1868768_+	YqbH/XkdH family protein	NA	NA	NA	NA
WP_060832589.1\|1868764_1869262_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	3.1e-37	46.2
WP_046344349.1\|1869266_1869722_+	hypothetical protein	NA	NA	NA	NA
WP_008344108.1\|1869708_1869921_+	hypothetical protein	NA	NA	NA	NA
WP_046344348.1\|1869924_1871271_+\|portal	phage portal protein	A0A0A7S087	Clostridium_phage	2.1e-80	41.2
WP_003213309.1\|1871272_1871716_+\|tail	phage tail tube protein	A0A0A7RVP1	Clostridium_phage	7.6e-27	46.5
WP_074041930.1\|1871992_1872082_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_008344099.1\|1872232_1872673_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	1.7e-10	35.8
WP_008344097.1\|1872714_1872852_+	hypothetical protein	NA	NA	NA	NA
WP_060832588.1\|1872907_1876858_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	7.3e-44	45.3
WP_007500584.1\|1876850_1877519_+	LysM peptidoglycan-binding domain-containing protein	A0A0K2SUI2	Clostridium_phage	2.9e-22	29.6
WP_046344343.1\|1877530_1878541_+	hypothetical protein	H7BV96	unidentified_phage	2.7e-35	28.7
WP_017358996.1\|1878537_1878804_+	DUF2577 family protein	S6C459	Thermus_phage	4.7e-08	37.5
WP_024719684.1\|1878818_1879241_+	DUF2634 domain-containing protein	NA	NA	NA	NA
WP_007500587.1\|1879233_1880280_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	8.6e-69	43.5
WP_060832587.1\|1880266_1881190_+	YmfQ family protein	A0A0A7RTT8	Clostridium_phage	9.4e-11	28.5
WP_008344081.1\|1881201_1881585_+	hypothetical protein	NA	NA	NA	NA
WP_008344078.1\|1881600_1882479_+	hypothetical protein	NA	NA	NA	NA
WP_008344076.1\|1882489_1882819_+\|portal	phage portal protein	A0A2H4JCI0	uncultured_Caudovirales_phage	1.2e-08	35.6
WP_008344073.1\|1882815_1882989_+\|portal	phage portal protein	A0A2H4JAA1	uncultured_Caudovirales_phage	1.4e-08	51.0
WP_008344072.1\|1882996_1884127_+	hypothetical protein	NA	NA	NA	NA
WP_113745353.1\|1884226_1885546_+	hypothetical protein	A0A1P8CWR7	Bacillus_phage	2.7e-27	31.6
WP_019743387.1\|1885559_1885880_+	hypothetical protein	O64053	Bacillus_phage	8.8e-17	44.2
WP_017367923.1\|1885879_1886020_+	XkdX family protein	NA	NA	NA	NA
WP_017367922.1\|1886056_1886269_+	hypothetical protein	A0A290GDY2	Caldibacillus_phage	5.1e-13	53.6
WP_008361671.1\|1886281_1886545_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	5.9e-27	69.0
WP_060832586.1\|1886564_1887386_+	N-acetylmuramoyl-L-alanine amidase	Q9ZXD7	Bacillus_phage	5.2e-61	68.9

DBSCAN-SWA_8

2537242 : 2543828

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026050106.1\|2537242_2537893_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.7e-41	40.8
WP_017359786.1\|2537904_2538528_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	2.6e-57	58.6
WP_007501031.1\|2538554_2539019_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.1e-43	66.0
WP_008344455.1\|2539132_2539486_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_017359784.1\|2539711_2540236_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_008359694.1\|2540324_2540417_-	YjcZ family sporulation protein	NA	NA	NA	NA
WP_007501021.1\|2540627_2541386_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.5e-10	36.8
WP_008344462.1\|2541375_2541969_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	9.0e-15	36.0
WP_017359783.1\|2542082_2542562_+	DUF3907 family protein	NA	NA	NA	NA
WP_056704686.1\|2542676_2543828_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	1.9e-24	37.7

DBSCAN-SWA_9

2581885 : 2589593

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003215863.1\|2581885_2582164_+	non-specific DNA-binding protein Hbs	A7KV42	Bacillus_phage	5.6e-28	74.2
WP_003215789.1\|2582354_2582924_+	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	1.8e-49	57.3
WP_008344541.1\|2582947_2583178_+	trp RNA-binding attenuation protein MtrB	NA	NA	NA	NA
WP_007500958.1\|2583293_2584061_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_035391650.1\|2584064_2584769_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_007500951.1\|2584793_2585756_+	heptaprenyl diphosphate synthase component II	A0A1V0SE37	Indivirus	1.7e-07	26.0
WP_003216015.1\|2585885_2586332_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.5e-27	42.3
WP_008344547.1\|2586476_2587253_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_008344548.1\|2587329_2588502_+	chorismate synthase	A0A291AU41	Pandoravirus	7.6e-42	35.2
WP_007500945.1\|2588501_2589593_+	3-dehydroquinate synthase	E5ERI4	Ostreococcus_lucimarinus_virus	2.4e-21	27.6

DBSCAN-SWA_10

2939446 : 2945695

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008344008.1\|2939446_2940406_-	stage V sporulation protein K	G3MAX6	Bacillus_virus	3.9e-52	39.6
WP_060832344.1\|2940726_2941485_+	N-acetylmuramoyl-L-alanine amidase	A0A0N6W8I1	Bacillus_phage	1.1e-46	53.8
WP_007499431.1\|2941540_2942158_-	hypothetical protein	A0A127AYS1	Bacillus_phage	3.0e-45	45.3
WP_008344010.1\|2942242_2943223_-	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	4.2e-150	80.6
WP_017359033.1\|2943240_2945343_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	82.8
WP_017359034.1\|2945302_2945695_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	8.8e-27	56.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage