CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP018665	Klebsiella pneumoniae strain CAV1042 plasmid pCAV1042-2781, complete sequence	0 crisprs	NA	0
NZ_CP018671	Klebsiella pneumoniae strain CAV1042 chromosome, complete genome	2 crisprs	DinG,DEDDh,csa3,cas3,RT,WYL	7
NZ_CP018667	Klebsiella pneumoniae strain CAV1042 plasmid pCAV1042-5566, complete sequence	0 crisprs	NA	0
NZ_CP018669	Klebsiella pneumoniae strain CAV1042 plasmid pKPC_CAV1042-89, complete sequence	0 crisprs	NA	1
NZ_CP018666	Klebsiella pneumoniae strain CAV1042 plasmid pCAV1042-3223, complete sequence	0 crisprs	NA	0
NZ_CP018668	Klebsiella pneumoniae strain CAV1042 plasmid pKPC_CAV1042-44, complete sequence	0 crisprs	NA	0
NZ_CP018670	Klebsiella pneumoniae strain CAV1042 plasmid pCAV1042-183, complete sequence	0 crisprs	csa3	9

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

21782 : 52662

Escherichia_phage(44.44%)

transposase,protease,integrase

attL 19409:19423|attR 25804:25818

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
19409:19423	attL	NA	NA	NA	NA
WP_004187383.1\|21782_22523_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	9.5e-22	51.6
WP_020316874.1\|22541_22745_-	hypothetical protein	NA	NA	NA	NA
WP_004187390.1\|22786_23272_-	hypothetical protein	NA	NA	NA	NA
WP_004206901.1\|23268_23856_-	restriction endonuclease	NA	NA	NA	NA
WP_004187394.1\|23848_24097_-	helix-turn-helix transcriptional regulator	A0A248SLB9	Klebsiella_phage	1.6e-10	53.0
WP_004206900.1\|24083_24554_-	hypothetical protein	NA	NA	NA	NA
WP_004206899.1\|24694_25240_+	hypothetical protein	NA	NA	NA	NA
WP_004206898.1\|25392_25800_-	hypothetical protein	NA	NA	NA	NA
WP_015062853.1\|25801_26380_-	hypothetical protein	NA	NA	NA	NA
25804:25818	attR	NA	NA	NA	NA
WP_004206896.1\|26357_26714_-	hypothetical protein	NA	NA	NA	NA
WP_004206895.1\|27241_28516_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_004206894.1\|28533_28791_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004206893.1\|28791_29475_+	hypothetical protein	NA	NA	NA	NA
WP_004187411.1\|29519_29738_+	hypothetical protein	NA	NA	NA	NA
WP_004187413.1\|29740_29950_+	hypothetical protein	NA	NA	NA	NA
WP_004187425.1\|31324_31759_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.2e-29	55.3
WP_147810693.1\|31851_32217_-	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_004187429.1\|32185_32443_-	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_004206890.1\|32534_33188_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_004206889.1\|33267_33651_+	DUF1496 domain-containing protein	NA	NA	NA	NA
WP_004187436.1\|33755_34151_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_004206887.1\|34195_35458_+	hypothetical protein	NA	NA	NA	NA
WP_004206886.1\|35468_36419_+	DsbC family protein	NA	NA	NA	NA
WP_004206885.1\|36431_38519_+	conjugal transfer protein TrbC	NA	NA	NA	NA
WP_000509966.1\|39101_39707_-	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_000427623.1\|42289_43294_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_002210513.1\|44133_44895_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_020316986.1\|44915_45776_-	class A extended-spectrum beta-lactamase SHV-7	A0A077SL40	Escherichia_phage	6.4e-155	99.0
WP_000654805.1\|45896_46865_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	7.7e-181	96.9
WP_000732275.1\|46930_47206_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_000522996.1\|47233_47659_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_001067855.1\|47854_48559_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000219391.1\|48680_49586_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000004159.1\|49582_50821_+	MFS transporter	NA	NA	NA	NA
WP_001137892.1\|50820_51405_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|51897_52662_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018671

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018671_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018671_1

3310926-3311002

Orphan

Consensus_repeat	Method
GGGTTCGGAAACCGAACTCAGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018671_1

>merge|NZ_CP018671|1|3310926-3311002|CRISPRCasFinder
GGGTTCGGAAACCGAACTCAGTCATAAACGGCCAGGAATCGTCGCTAAAAAACAGGGTTCGGATACCGAACTCAGTC

>NZ_CP018671|1|1|3310926-3311002|CRISPRCasFinder
GGGTTCGGAAACCGAACTCAGTC	ATAAACGGCCAGGAATCGTCGCTAAAAAACA
GGGTTCGGATACCGAACTCAGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018671.1\|WP_009484467.1\|3299751_3300159_-\|DUF943-family-protein	unknown	unknown	gnl\|CDD\|368741
NZ_CP018671.1\|WP_004115572.1\|3309924_3310173_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018671.1\|WP_004115554.1\|3318112_3318871_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236892
NZ_CP018671.1\|WP_004115560.1\|3316839_3317082_+\|DUF4160-domain-containing-protein	unknown	unknown	gnl\|CDD\|379344
NZ_CP018671.1\|WP_004115557.1\|3317450_3318116_+\|PilL-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|163460
NZ_CP018671.1\|WP_004115565.1\|3313062_3315072_+\|DNA-topoisomerase-III	unknown	unknown	gnl\|CDD\|236078
NZ_CP018671.1\|WP_004115579.1\|3305566_3306937_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP018671.1\|WP_004115563.1\|3315707_3316178_+\|DUF3577-domain-containing-protein	unknown	unknown	gnl\|CDD\|371899
NZ_CP018671.1\|WP_004115577.1\|3306933_3308628_+\|ParB-family-protein	unknown	unknown	gnl\|CDD\|213858
NZ_CP018671.1\|WP_085955203.1\|3302771_3304135_+\|IS3-like-element-ISKpn1-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP018671.1\|WP_004115558.1\|3317065_3317314_+\|DUF2442-domain-containing-protein	unknown	unknown	gnl\|CDD\|378424
NZ_CP018671.1\|WP_004115567.1\|3312492_3313047_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018671.1\|WP_009484465.1\|3301386_3301863_-\|PAAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377514
NZ_CP018671.1\|WP_009484466.1\|3300151_3301387_-\|DUF3289-family-protein	unknown	unknown	gnl\|CDD\|371671
NZ_CP018671.1\|WP_004115569.1\|3311765_3312491_+\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|378089
NZ_CP018671.1\|WP_004115581.1\|3304698_3305574_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP018671.1\|WP_004115576.1\|3308620_3309331_+\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NZ_CP018671.1\|WP_004115574.1\|3309337_3309928_+\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP018671.1\|WP_154816772.1\|3311523_3311697_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018671.1\|WP_004115562.1\|3316238_3316775_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236362

Protein	Function_ID	Function_description	E-value
NZ_CP018671.1\|WP_009484467.1\|3299751_3300159_-\|DUF943-family-protein	gnl\|CDD\|368741	pfam06092, DUF943, Enterobacterial putative membrane protein (DUF943). This family consists of several hypothetical putative membrane proteins from Escherichia coli, Yersinia pestis and Salmonella typhi.	3.96173e-33
NZ_CP018671.1\|WP_004115554.1\|3318112_3318871_+\|hypothetical-protein	gnl\|CDD\|236892	PRK11281, PRK11281, mechanosensitive channel MscK.	0.000329068
NZ_CP018671.1\|WP_004115557.1\|3317450_3318116_+\|PilL-N-terminal-domain-containing-protein	gnl\|CDD\|163460	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family. This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions].	9.20309e-47
NZ_CP018671.1\|WP_004115565.1\|3313062_3315072_+\|DNA-topoisomerase-III	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP018671.1\|WP_004115579.1\|3305566_3306937_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP018671.1\|WP_004115577.1\|3306933_3308628_+\|ParB-family-protein	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	1.94338e-149
NZ_CP018671.1\|WP_004115563.1\|3315707_3316178_+\|DUF3577-domain-containing-protein	gnl\|CDD\|371899	pfam12101, DUF3577, Protein of unknown function (DUF3577). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 143 to 307 amino acids in length.	4.87835e-79
NZ_CP018671.1\|WP_004115558.1\|3317065_3317314_+\|DUF2442-domain-containing-protein	gnl\|CDD\|378424	pfam10387, DUF2442, Protein of unknown function (DUF2442). This family of bacterial and fungal proteins has several members annotated as being putative molybdopterin-guanine dinucleotide biosynthesis protein A; however this could not be verified. Hence the function is not known. This family also includes the DUF3532 that was found to be related and was merged into this family. Members of this family also fall into the NE0471 N-terminal domain-like superfamily, a family of proteins with a unique fold in SCOP:143880.	7.40983e-20
NZ_CP018671.1\|WP_004115560.1\|3316839_3317082_+\|DUF4160-domain-containing-protein	gnl\|CDD\|379344	pfam13711, DUF4160, Domain of unknown function (DUF4160).	7.33131e-17
NZ_CP018671.1\|WP_009484465.1\|3301386_3301863_-\|PAAR-domain-containing-protein	gnl\|CDD\|377514	pfam05488, PAAR_motif, PAAR motif. This motif is found usually in pairs in a family of bacterial membrane proteins. It is also found as a triplet of tandem repeats comprising the entire length in a another family of hypothetical proteins.	3.66485e-13
NZ_CP018671.1\|WP_004115574.1\|3309337_3309928_+\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	9.02647e-77
NZ_CP018671.1\|WP_004115569.1\|3311765_3312491_+\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|378089	pfam08900, DUF1845, Domain of unknown function (DUF1845). This family of proteins are functionally uncharacterized.	2.18363e-102
NZ_CP018671.1\|WP_004115581.1\|3304698_3305574_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	8.49471e-22
NZ_CP018671.1\|WP_004115576.1\|3308620_3309331_+\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	1.94287e-09
NZ_CP018671.1\|WP_009484466.1\|3300151_3301387_-\|DUF3289-family-protein	gnl\|CDD\|371671	pfam11692, DUF3289, Protein of unknown function (DUF3289). This family of proteins with unknown function appears to be restricted to Proteobacteria.	5.05667e-125
NZ_CP018671.1\|WP_085955203.1\|3302771_3304135_+\|IS3-like-element-ISKpn1-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.83644e-52
NZ_CP018671.1\|WP_004115562.1\|3316238_3316775_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	1.67596e-92

>NZ_CP018671.1|WP_004115572.1|3309924_3310173_+|hypothetical-protein
MKYRMVAPGLRAPHGTPPQCCQKALRQVRRFRQGARNYTRLDEKGCGYYKIDLGPFWRLLSRNEGRTWLLLSHERYNSAIRK
>NZ_CP018671.1|WP_004115574.1|3309337_3309928_+|DUF2857-domain-containing-protein
MMNSLSQAANGLLMQLVMDLRSGYLRRCESLGLNREEMQMLQGLSLEELHYLSGSEVSIISVGINHGNLVRMLQQARTEQKRLQRIDRALALGGSIELMANYFGLSSTDVAARRRIAGIDVRPGRGNALGDEENAALWRQWQKSDVEDAESADGLDVMMLAAEQMNVSLTSVWHAVRGWHKTRQPSPARTPVRKTA
>NZ_CP018671.1|WP_004115576.1|3308620_3309331_+|DUF2786-domain-containing-protein
MNNSQRQLRLLNLVRKLLKLGRSNSNAHEAGLALQRAQKLMARYGISELDAGLTSVREASSRTAPSDAEKVPEWMVTLVRGVCHAFGCRAYYSWRQTSAGYRRSVTFYGFSEKPEIAAYAFDVLTRQLKDATNSYLKTQSKRLKLATRRARAEQFRDGWVCGVREVISATDISSEEQQVMSHWLESRSMKTVTTRELKACRGADTARYQGYEAGQNARLHQGVSGRGPAAIGYRQD
>NZ_CP018671.1|WP_004115577.1|3306933_3308628_+|ParB-family-protein
MSRKSSNVGAAMLQPGRQSQAAGNISVMPAAEMPMVLTLDQLSPNPDNPRTSRNPRYDDIKASIRSRGLDTVPKVTRDPDGEPDMYIFSDGGNTRYQILSELWQETGEDRFFRVHVLFKPWPGRLQCVIGHLAENEVRGELSFIEKAQGIHKARSIYEEQMGKTVSLRQLSELLTHEGLPVHYSTVSRMEDALKYLYPWIPDLLESGLGRPQITALLALRHDAERVWDEFCLISDTGDKSFSDVFGQCCGRFNSPELWSLEMFRDELIGDLLHALPHPELDYDRWMMELDPKERNRRHHFGDPEPVSIPPANSLVTADSAGQATPAQKSVEVVQPFSSPRREISGEPVTPAPDNTPPEKLDKQHPRHEVQPDMYGAAPVISGESADVSGLVTLSDGYGEENGGEEGNGEDGLLSLLTPEPEVVLQDDAPVTNDSIWHVPAHQDDIEHLQNTAFRLAWELGEVLGCEDEILPQRDNDMSAGYVGAGEMCSEAAAFLLGLTGEAPALHPAAGVCGLPELFTGGPGEGEAPALTDEDALKLLRLLRVMRRLRELQRGLTYGEDNSDE
>NZ_CP018671.1|WP_004115579.1|3305566_3306937_+|replicative-DNA-helicase
MSEMMMPCSYEAEQAVLGGLMLDNDRWDEVILQISPEDLFSRPHRMVFRVMAELAGEGLPLDLITITERLENRGDLEQCGGFAYLAEMSKNTPSAANILAYAGVVAEKSRLRQLMTVGNSLLSDVQAPKASSAGILESAEGKLFNIAEQGAMQLNSETGVNEALDKLLTQLESMSASDGLTGTPTGFSELDAMTCGLQPGDLALLAARPSMGKTSLAMAACTAAVSAKPDDHVFVFSLEMPSEQLMMRLLAMEGRVELSRLRSGNMDDEDWARVSEATGRIIEWKNRLIIDDTSYQTPATLRARARRYVRKYGRPSLIMLDYLQLVRSPEQENRTQEIAEISRSLKALGKELGCPVLALSQLNRLVEQRADKRPNNGDLRDSGALEQDADLIMFIYRDEVYNPGTPDAGVAEIIVGKQRQGPTGTVKVKFDGRYTLFSEFQEGSYDFGYRSGRKQA
>NZ_CP018671.1|WP_004115581.1|3304698_3305574_+|ParA-family-protein
MKILPVISPKGGEGKSTFAAYLAGFLADAGLNTLLVDADYSQPTASSIFALEDESPFGLYELLMQMVSDHTQCISQTAIKNLDVIYSNDPDELLPTAMLHAADGRLRLRNILQHPFFNRYDAIIVDSKGATGVMTELSLLSSTGNVMGIVKPILPDVREFIRGSLHMLTRLKTYENYGIRLPDISILVNCIENTLLDREAMDGLAAIINEKHYDASALGNRDVYRLLDTRIEALDIFKLGHVKQQPVHRLEYKTRRKGPAAAVTMHDLACELFPEWQSHFSDVLTREVRHV
>NZ_CP018671.1|WP_085955203.1|3302771_3304135_+|IS3-like-element-ISKpn1-family-transposase
MAKPKYSPETKLAVVNHYLSGKDGEQSTADLFGIERTSVRRWVRAWQFHGAEGLTAKNNHYSDEFKLVVVRAVISDRLTMREAAARFNLSAEILVRRWLDVYNDAGAEGLLNMQCGRPGQMTKPKNIPPLTDKELEKLSPEELRAELRYLRAENAYPKKVESLGSERKKWQKALIISELRHEHALRDLLRAAGMSRSTWYYNMNALKQGDRYAGLKENIRKIYHYHKGRYGYRRITLALRKQGLRINHKTVQRLMAELSLRSVIRAKKYRAWKGRTGEAAPNILSRNFGASKANEKWVTDVTEFPVQGKKLYLSSVLDLFNREVIAYSLSERPVMEMVNTMLDGAFPKLRPGDAPLLHSDQGWHYRMRSYQERLKAHGMTQSMSRKGNCLDNAVMENFFGTLKSECFYLREFRSVSALRKAVEDYIHYYNNERISLKLKGLSPVEYRTQALRAA
>NZ_CP018671.1|WP_009484465.1|3301386_3301863_-|PAAR-domain-containing-protein
MSQQYTNELTTDVLERLRQPPFTDEFLSELEPQSRQSLVAEMESMLQRPVLHIFRGATIGSLTRHGGVIRETSGKSTLDGHYSARVGDKVVYPDGREATIICGAGKGRVMQGESMALVGSMLDNGDEIISTPQGCQMFVFREGDALPDGFLTVPGDKH
>NZ_CP018671.1|WP_009484466.1|3300151_3301387_-|DUF3289-family-protein
MALEGYFLFQGDRTVCGGKIITGAEDTEFFGRSQARESDKVTCGKHPGIYRICGGMGDMYEVGGVNRQLAGSIESYSSCPCRAKFIPQDLDNTYEYNCNAGLAAEREREASRKKLNEAKAKGPQPMPLPALIYATQRAMDDYGAKDMHHGDLSEEALKERFGLTDVSAKVNPYTLTLVPPAPASSYGVFYPGSLTGSTPVVVSREESVRLMFDEFRGLAKVFSFHGPYKNIITEMINHMQGNSGTPYSSPLLDRALKEQILNDHSSDSSLLGIKRALDDAVSYEYGFLPLGKKDDLFDGKGNFKEVNKAVLPKFDRQIDKTNGLVITVHDTWSTHITLESLEVTGDSYRAKVHYRVQDHFGLDDADILNPVFHQGRIFRIWFVLQRYVKYGYRPFITEMNATVEISGRRGE
>NZ_CP018671.1|WP_009484467.1|3299751_3300159_-|DUF943-family-protein
MNKRLIAGVVAAAVGGYLLWQYLSPVEIVAVHDGNTILVRHFPYLKSRQIAWWEANKAVIQAKYGIPHEGKDGFYHVWIVDFGDGYRTEPDENLLFSTDEVFCFNDIPTEDRCIDRKPLFDVRWSRNYGLKYESY
>NZ_CP018671.1|WP_154816772.1|3311523_3311697_-|hypothetical-protein
MNNLKPDRHRYKFAEPSSLLWRRSIAWLSTSVATGNSAHFLASTLLAKVQDFMLRCL
>NZ_CP018671.1|WP_004115569.1|3311765_3312491_+|TIGR03761-family-integrating-conjugative-element-protein
MSDGKTKGGTTASRAGALQSSVNILLHTHYAIRLWEGRKRDAPDETGVKKKRPEIISMPQAIARAGNASRDSAADNPYADMALVRLEEALQRATLKINENVSSLDAILSAVPKGVTLSEVESADPLNVSVFSRSPLGYRCVWLLVGYDQLAMKAFQAFHYGLISRSQRDAILDNGGHAVRQVYGVIQPYRTLAVTRRDIAEKTTQGLVAIERNGEPDPDVLSGKKRSSFSPPLKNTIAEEE
>NZ_CP018671.1|WP_004115567.1|3312492_3313047_+|hypothetical-protein
MIRPVFLLTSFFLLSGCATTDWAAINKQVSDTAANLKKTLGGNDSGESGGMPLMSPAGQQAMKSVDKTFSVPVDVDTAAARLKRHYKFISTQELEALRQATNDGDWKAAAEDDAHPVWDAMPGSYYKMGSDWNGRDHLDIEIEKNGSGSRLYVVYRSSSSQRLAGSGVTKLMNDVRAVAAGEKR
>NZ_CP018671.1|WP_004115565.1|3313062_3315072_+|DNA-topoisomerase-III
MQLFLCEKPSQAKDIARVLGISKREQGFISGGNIVVTWAVGHLLETASPEAYGEQYGRPWRADVLPVLPEAWKMVVKEQTKSQFTVISKLLKKASEVVIATDADREGEVIARELLEYCHYSGAVRRLWLSALDEASVKEALSSILPGEKTALLYDAGKGRSQADWLIGMNLTRLYTLKARDSGVSEVLSVGRVQTPTLAMVVNRDNEITSFVPKPWWQVHALIEKEGVRFRAGWVPVEQYCDEEKRCINPQAARAVGQLCQQQGRATVLEVTQKREKTAAPLCFDLGTLQQVCSRKFGMGANDVLAIAQSLYETHKATTYPRTDCGFLPTSMQQEIPDVLAAVAKSDPAVAPVLNQLDRKFVSRVWNDKKITAHHAIIPTRQAFDLSRLSADELKVYQLIRQHYFAQFLPLQESDVTEASFNIGGQLFRTRGKVGVVTGWKSLFQAEKDDDEEDADGDSMALPALAKGDICAVTGAEVKDMKTSPPKPFTEGTLIAAMKNAASFVSDPKLKKVLRDNAGLGTEATRAGVLETLFKRHYLEKKGKHIHSTQVARELIAALPETLTSPGMTALWEQALDDISQGKMSLAVFMQKQLQWTRHLVEKGRQDSVKITAPVTPPCPLCKGPTRKRKGKNGDFWGCIRYPDCEGIISTGKKKAAKRKKTSVKAKTE
>NZ_CP018671.1|WP_004115563.1|3315707_3316178_+|DUF3577-domain-containing-protein
MSANNTSASAKSEYFNLTIKGIGYLSNIRQVNHQNGSFLSCVINALSGPTDNPAYVRFDISVAGKEATSLIARCQKAVDEDKKVLLGFNLSNPSTDIFTLNKGDHAGEQRVSLKARLIKVDWIKIGQEMVYKTEKSDSVPPQNGSVAQQNYAENSF
>NZ_CP018671.1|WP_004115562.1|3316238_3316775_+|single-stranded-DNA-binding-protein
MSSRGVNKVILVGNLGQDPEVRYIPNGSAVATLSLATSESWRDKQSGEQKEVTEWHRVVIFGKLAEIAGEYLRKGSQVYIEGQLRTRKWTDQAGQDKYTTEVVVNIGGTMQMLGGRQSGSGQNTSSRNDWGQPQQPSGPTHSGQASGSSAGAPPMDFDDDIPFIGFGYGVPKSAIHAL
>NZ_CP018671.1|WP_004115560.1|3316839_3317082_+|DUF4160-domain-containing-protein
MPVILRINGFRFFFYSNEGNPLEPAHIHVMKAGSEAKFWLTPSVVLASNDGFNSRVLKELTGIVEDNQALFLEAWNDYFS
>NZ_CP018671.1|WP_004115558.1|3317065_3317314_+|DUF2442-domain-containing-protein
MTISAKRVSFDEATMWVELNDARTIGVPLAWFPRLLHASTEQLNSYELSPRGIHWDALDEDISIAGLLEGRGDVTHRPHKVA
>NZ_CP018671.1|WP_004115557.1|3317450_3318116_+|PilL-N-terminal-domain-containing-protein
MKRNTSHNVFSPGRLATVLPLLLLAGCVSQPQKLQQRAPADPTPGTTVTRNVQPVSPDEYARTPEVVRYDRYLLVSTDPQAAQRDPLSQIIDIRIPSSLHPTVADALRYALRQSGYSLCATGSANGVLYRQALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCHSLRDGYQLPVSQLPPPVSTWSAPAPSAVSQPAISAPQSVPVKPVSGGFLRK
>NZ_CP018671.1|WP_004115554.1|3318112_3318871_+|hypothetical-protein
MSEQQPFHTDPAPARKRFSWRPRRRLIWGAAGGVALAGILALGYTAFSLGISDLDERLTRLESQGSTAATVETVAALQSDVTTLRAGLQDSQKKLGEMQQELSAAAKQAGSDDAVRQSLRTLQDAQQGLETRLSALTEQLTALKSQPAPAPAAPVAAPVKKNAPAAKKPRPADTRRAAPSLRMARNAPFVLTGVEKRGAESWAAIAPRGYSSLSQVALVGEGETVAGWTLVSAGYGEATFRVNGRLTVLRAE

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Crispr_ID: NZ_CP018671_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018671_2

3563083-3563374

Orphan

Consensus_repeat	Method
CCGGCGCCATACCCGCCTTTGTGCCGGATGGCGGCTTCGCCTTATCCGGCCTACGG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP018671_2

>merge|NZ_CP018671|2|3563083-3563374|PILER-CR
CCGGCGCCATACCCGCCTTTGTGCCGGATGGCGCTACGCTTATCCGGCCTACGGGATCCTCCCGTAAGCTCCTATACCGTAGGCCCGGCAAGCGCAGCGCCGTCGGGCAGGACACCTCCGGCGCCATACCCGCCTTTGTGCCGGATGGCGGCTTCGCCTTATCCGGCCTACGGCATCCTCCCGTAAGCTCCTATACCCCAGGCCCGGCAAGCGTAGCGCCGCCGGGCAGGACACCTCCGGCGCCATACCCGCCTTTGTGCCGGATGGCGGCTTCGCCTTATCCGGCCTACGG

>NZ_CP018671|2|1|3563083-3563374|PILER-CR
CCGGCGCCATACCCGCCTTTGTGCCGGATGGCGCTACGCTTATCCGGCCTACGGGA	TCCTCCCGTAAGCTCCTATACCGTAGGCCCGGCAAGCGCAGCGCCGTCGGGCAGGACACCTCC
GGCGCCATACCCGCCTTTGTGCCGGATGGCGGCTTCGCCTTATCCGGCCTACGGCA	TCCTCCCGTAAGCTCCTATACCCCAGGCCCGGCAAGCGTAGCGCCGCCGGGCAGGACACCTCC
GGCGCCATACCCGCCTTTGTGCCGGATGGCGGCTTCGCCTTATCCGGCCTACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018671.1\|WP_004152193.1\|3570022_3570907_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP018671.1\|WP_004152190.1\|3563552_3564410_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP018671.1\|WP_004894670.1\|3549787_3552643_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP018671.1\|WP_016946338.1\|3571973_3573284_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP018671.1\|WP_004152275.1\|3549163_3549667_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP018671.1\|WP_047718300.1\|3557334_3558837_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP018671.1\|WP_002886955.1\|3555106_3556204_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP018671.1\|WP_009484068.1\|3575334_3576222_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP018671.1\|WP_002886956.1\|3556203_3557286_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP018671.1\|WP_002886954.1\|3553205_3554717_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP018671.1\|WP_016946339.1\|3573423_3574494_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226359
NZ_CP018671.1\|WP_004177654.1\|3561632_3562442_+\|5-deoxy-glucuronate-isomerase	unknown	unknown	gnl\|CDD\|226241
NZ_CP018671.1\|WP_004186740.1\|3568967_3569981_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP018671.1\|WP_002886970.1\|3570930_3571830_+\|myo-inosose-2-dehydratase	unknown	unknown	gnl\|CDD\|275172
NZ_CP018671.1\|WP_071557264.1\|3566980_3568921_+\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	unknown	unknown	gnl\|CDD\|275170
NZ_CP018671.1\|WP_004178392.1\|3558935_3559757_-\|TIM-barrel-protein	unknown	unknown	gnl\|CDD\|226615
NZ_CP018671.1\|WP_004146794.1\|3560108_3561614_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP018671.1\|WP_064839899.1\|3574499_3575324_-\|phosphodiesterase	unknown	unknown	gnl\|CDD\|277347
NZ_CP018671.1\|WP_071557263.1\|3564561_3566475_-\|5-dehydro-2-deoxygluconokinase	unknown	unknown	gnl\|CDD\|378281
NZ_CP018671.1\|WP_002886953.1\|3552642_3553086_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581

Protein	Function_ID	Function_description	E-value
NZ_CP018671.1\|WP_004152193.1\|3570022_3570907_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	4.59137e-43
NZ_CP018671.1\|WP_004152190.1\|3563552_3564410_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	9.80298e-76
NZ_CP018671.1\|WP_004894670.1\|3549787_3552643_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP018671.1\|WP_016946338.1\|3571973_3573284_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.52762e-112
NZ_CP018671.1\|WP_004152275.1\|3549163_3549667_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.98013e-19
NZ_CP018671.1\|WP_047718300.1\|3557334_3558837_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP018671.1\|WP_002886955.1\|3555106_3556204_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP018671.1\|WP_009484068.1\|3575334_3576222_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.36183e-67
NZ_CP018671.1\|WP_002886956.1\|3556203_3557286_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP018671.1\|WP_002886954.1\|3553205_3554717_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP018671.1\|WP_016946339.1\|3573423_3574494_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	1.25057e-154
NZ_CP018671.1\|WP_004177654.1\|3561632_3562442_+\|5-deoxy-glucuronate-isomerase	gnl\|CDD\|226241	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism].	1.10838e-154
NZ_CP018671.1\|WP_004186740.1\|3568967_3569981_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.69119e-61
NZ_CP018671.1\|WP_002886970.1\|3570930_3571830_+\|myo-inosose-2-dehydratase	gnl\|CDD\|275172	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase. Members of this family include the enzyme myo-inosose-2 dehydratase, product of the gene iolE, as found in inositol utilization cassettes in many species. [Energy metabolism, Sugars].	1.05045e-151
NZ_CP018671.1\|WP_071557264.1\|3566980_3568921_+\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	gnl\|CDD\|275170	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase. Members of this protein family, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase (iolD), represent one of eight enzymes in a pathway converting myo-inositol to acetyl-CoA. IolD hydrolyzes the cyclic molecule 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione to yield 5-deoxy-D-glucuronic acid. TPP is a cofactor. [Energy metabolism, Sugars].	0
NZ_CP018671.1\|WP_004178392.1\|3558935_3559757_-\|TIM-barrel-protein	gnl\|CDD\|226615	COG4130, COG4130, Predicted sugar epimerase [Carbohydrate transport and metabolism].	2.48003e-94
NZ_CP018671.1\|WP_004146794.1\|3560108_3561614_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP018671.1\|WP_064839899.1\|3574499_3575324_-\|phosphodiesterase	gnl\|CDD\|277347	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.87855e-90
NZ_CP018671.1\|WP_071557263.1\|3564561_3566475_-\|5-dehydro-2-deoxygluconokinase	gnl\|CDD\|378281	pfam09863, DUF2090, Uncharacterized protein conserved in bacteria (DUF2090). This domain, found in various prokaryotic carbohydrate kinases, has no known function.	0
NZ_CP018671.1\|WP_002886953.1\|3552642_3553086_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	8.31766e-69

>NZ_CP018671.1|WP_004177654.1|3561632_3562442_+|5-deoxy-glucuronate-isomerase
MSLLAKSRKEGQIQHITPQSAGWRYIGFDVWMLKKGQTVTLESGDRELCLVLVAGLASVKTQHADFPNLGKRMSPFERTPPWSVYVPPQDKVEVTADSDLELAVCSAPGKGSFPARLIRPEDVGVEHRGKGRNQRRVHNILPDSAEADCLLVVEVYTDEGATSSWPSHKHDTAQPGKETQLEETYYHRFDPPQGFAFQRVYTDDRSLDACMAPYNHDVVMVPRGYHPVAAIAGYDSYYLNVMAGPDRKWLFTWEDDHAWINTPEYPRHD
>NZ_CP018671.1|WP_004146794.1|3560108_3561614_+|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MTITGNFIGGKTVISSSNETMPVYDPATGKAVREVTVSTAQEVSEAIQVARDAFDSWSRTTPLRRARVLFNFKMLLEQHVEELAGIIVSEHGKVWSDALGELTRGMEVVEFACGIPHLIKGEYSSDVGTGVDSYSLMQPLGVVAGITPFNFPAMVPMWMFPLALACGNSFVLKPPALAPTAAVRLAELLKEAGLPDGVFNVVHCSNEDAEQLYTDPRIAAVSFVGSSGVAEYIYKTASAHGKRVQAFGAAKNHAIVMPDADLDATVNAIMGGAFGSAGERCMALPVVVAVGDETADKLIARLKPLVEALKVGPGCMRGQEENEMGPVVSDTHQKKVLGYIDKGESEGAKLVVDGRKLRVPGYDAGYYVGGTLFDHVTPEMTIWREEIFGPVLGIVRAADYDSALELVNSHEFGNGSAVFTSNGHTAREFVHDVQAGMVGVNVPVPVPMAFHSFGGWKRSVFGALNVHGPDGVRFYTRMKTATVRWPAGQQTVSEFSMPTLG
>NZ_CP018671.1|WP_004178392.1|3558935_3559757_-|TIM-barrel-protein
MAIAMQRFCINRKIAPALSIEAFFRLVNRLGLNKVELRNDLPSGKVTDDLSHQQVRELAARYHIEILTINAVYPFNRRSEEVRQLTESLLKEAQAIGAKSLVLCPLNDGSEVPASETLGALRDLAPLFAFYGIHGLVEPLGFPQSSLRSAHQAQTLIHDARVPFKLLIDTFHHHLYPQAADEFSQVEVADIGLVHLSGVDDSRPREQLTDAERIMLTPQDRLGTCEQVKALEARGYQGVYAFEPFAPELAQWSEADIEREIEQSIALIQRHCA
>NZ_CP018671.1|WP_047718300.1|3557334_3558837_-|DUF853-domain-containing-protein
MSSPLLIARTLDNALYLLPAMANRHGLITGATGTGKTVTLQKLAESFSEIGVPVFMADVKGDLTGIAAAGQSSEKLQARLEKIGVSDWEPHANPVVLWDIFGEKGHPVRATVSDLGPLLLARLLNLNEVQSGVLNIIFRIADDRGLLLLDFKDLRAITQFIGDNAKSFQNQYGNINSASIGAIQRGLLTLEQQGAEHFFGEPMLDIADWMRVDASGKGVINILSAEKLYQMPKLYAASLLWMLSELYERLPEAGDLDKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVYFVSQNPADIPDAVLGQLGNRVQHALRAFTPKDQKAVKTAAQTMRANPAFSTEQAIQELGTGEALISFLDEKGSPSVVERAMVIAPCSRMGPVSDDERNSLLNHSPLYGKYEEEVDRESAFEMLQQGVQVATRQQSAPPAKGQQSGDDDGLLGGLKDILFGSTGPRGGKRDGIVQTAAKSAVRQVTNQIVRGMLGSLLGGRKR
>NZ_CP018671.1|WP_002886956.1|3556203_3557286_+|LPS-export-ABC-transporter-permease-LptG
MQAFGVLDRYIGKTIFNTIMMTLFMLVSLSGIIKFVDQLKKSGQGSYDALGAGLYTILSVPKDIQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRLQVALAVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQQMYGGSLLSTQQGLWAKDGHNFVYIERVKGNDELGGVSIYAFNPERRLQSVRYAASAKFDSENKVWRLSQVDESDLTDPKQVTGSQMVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDPGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFIFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLMMRKA
>NZ_CP018671.1|WP_002886955.1|3555106_3556204_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPTNLVLSLLGLGIPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLIKAAMILALFTGAVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQASDGNAVMFIESVNGNRFHDVFLAQLRPKGNARPSVVVADSGELSQQKDGSQVVTLNKGTRFEGTAMLRDFRITDFNNYQAIIGHQAVSADPDDTEQMDMRTLWKTHTDRARAELHWRFTLVATVFIMALMVVPLSVVNPRQGRVLSMLPAMLLYLVFFLLQTSIKSNGGKGKMDPAIWMWAINLLYFALAVLLNLWDTVPMRRFRARFNKGAA
>NZ_CP018671.1|WP_002886954.1|3553205_3554717_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNILSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADTYSKNVITRVIGEQQMRELGMNAYLAVGNGSQNESLMSVIEYKGNPAEDARPIVLVGKGLTFDSGGISIKPAEGMDEMKYDMCGAAAVYGVMRMVAELQLPLNVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMSNHNPLAHELIGASELAGDRAWRLPLADEFQDQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLSQFLLNRAGFNGEE
>NZ_CP018671.1|WP_002886953.1|3552642_3553086_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDATVDGLSAVEQLVCDIAAERWRNGKRVLIACEDEQQAIRLDEALWSRPPESFVPHNLAGEGPRGGAPVEIAWPQKRNSSPRDILISLRLNFADFATAFTEVIDFVPYEDNLKQLARERYKAYRMAGFNLNTATWK
>NZ_CP018671.1|WP_004894670.1|3549787_3552643_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKFVVLPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGRRHQLPMINILTFDGDIRESAEVYDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDNDGNVYVGRSEDEVRQENNLSADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFKTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGITLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEDQDCGFNGGEMVLSLADRWIIAEFNHTVKAYREALDNFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGSEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKAICGITADTIMLQPFPQYDASQVDDAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSKDAERRVNDNRSFLLNLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEIGRIESKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP018671.1|WP_004152275.1|3549163_3549667_-|GNAT-family-N-acetyltransferase
MNTSVPAATLLRRITAADNAAIARVIRQVSAEYGLTADKGYTVADPNLDELYELYSQPGSAYWVVEQEGEVVGGGGVAPLACSEPDICELQKMYFMTSARGQGLAKKLALLALDYAREQGFKRCYLETTAFLTEAIGLYEHLGFEHIDGPLGCTGHVDCEVRMLKTL
>NZ_CP018671.1|WP_004152190.1|3563552_3564410_-|MurR/RpiR-family-transcriptional-regulator
MANNPTQLTILQDEIRRRYDTLSKRLKQVARYILDNSNSVAFDTVASIAQQADVPPSTLIRFANAFGFSGFNEMKQMFKQHLMEETANYTERARLFRQTTSDESSPPETPTEILNMFTMVNNQALQQLAMQTSSDDLERAVALLGEAENIYVIGLRRSFSVASYLTYALRHLDRKAFLIDGLGGMFTEQLSLVGPKDVVVAVSFSPYAREVVELVELGAQRKARQIAITDSQVSPLAAFSDVCFVVREAQVDGFRSQVASLCLAQTLAVSLALNSSQESEAKQKA
>NZ_CP018671.1|WP_071557263.1|3564561_3566475_-|5-dehydro-2-deoxygluconokinase
MNAAVKRLDVICIGRVAVDLYAQQIGSRLEDVASFAKYLGGSSGNVAFGTAIQGLKSAMLARVGDEHNGRFLRETLNRAGVDTEYLITDKSRLTALVMLGIKDQETFPLIFYRDNCADMALTPDDISEEYIASSRALAVTGTHLSHANTRAAVLKALEYARRHGLRTALDIDYRPVLWGLTSLGDGETRFIESGPVTSQLQEVLHLFDLVVGTEEEFHIAGGSTDTLTALKNVRNATKATLVCKRGPMGCVVLEGVIPDSWDQVPLQQGVRVEVLNVLGAGDAFMSGLLRGWLNDEGWEQACRYANACGALVVSRHGCAPAMPTKVELDDYLQRAESVPRPDVDARLNHLHRVTSRRQQWPELCIFAFDHRKQLADLARETGRDEACIPQLKLLLLAAAEAAAQEAGLDQRSGILADGTYGQRALNAITGKGWWIGRPIELPSSRPLRLEHGNIGSQLIDWPLEHVVKCLVFYHPDDPAALRAEQDALLLEVWQACNKSGHELLLEVILPENGPDKDERHYHTMLEHFYQLGIKPDWWKLPPLSSASWQQITALIEREDPWSRGILILGLDAPSDKLRAGFAEAAAHPMIKGFAVGRTIFGQPSRRWMQGELSDEALIEEVKRNYLTLIGYWREARR
>NZ_CP018671.1|WP_071557264.1|3566980_3568921_+|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)
MGKLRLTTAQALVKFLDNQYLEVDGVELKFVKGIFAIFGHGNVLGLGQALEQDSGDMRVYQGRNEQGMAHAATGFARQALRRQIIACTSSIGPGAANMITAAGTASANRIPLLLLPGDVFATRQPDPVLQQIEQSYDLSISTNDAFRSVSKYWDRITRPEQLMSACINAMRVLTDPAETGAVTLCLPQDVQGEAWDYPESFFARRVHRLDRRPASAAQLADAVAAIKASRKPLIVCGGGVKYSGAGEALSRFAERYGVPFAETQAGKGTVVSSHPLNVGGVGETGCLAANLLAKEADLVIGVGTRFSDFTTASKWIFQHPEVRFLNINVSNFDAWKLDGIAMLADAREAMTALDAALADSGWQAGWGAQIESVQSRQLKETQRVYQAVWQEKSFVPEIDDHLDRESVYREFRQITDSTLTQSSVLGVLNETLPAEAVIVAAAGSLPGDLQRVWRNRAENTYHVEYGYSCMGYEVNAALGVKLAQPQSEVYSLVGDGSFMMLHSELVTSLQERAKINVVLFDNMANGCINNLQMEHGMDSFGTEFRYRQPETGQLQGGLVPVDFATIAAGYGCKTWRVTTLDELRHALDAARRETVSTLIDIKVLPKTMVHKYGSWWNVGVAQTALSERIRKVAQMINEKRAQARDY
>NZ_CP018671.1|WP_004186740.1|3568967_3569981_+|Gfo/Idh/MocA-family-oxidoreductase
MSLKLGVIGAGAIGKEHIRRCTQVLQGATVVAVSDINADNARAAVALPGVQAEVYADGHDVINASDVDAILVTSWDPTHEEYTLAAIAAGKPVFCEKPLAMTAEGCRRIVDAEMKAGRRLVQVGFMRPYDEGYLALKKVIDDGDIGAPLMLRCAHRNQSVGENYTTDMAITNTLIHELDVLRWLLNDDYRSVQVRFPRSTSHTHARLKDPQIVSFETKKGTLIDVEVFVNCQYGYDIQCEVVGETGIARLPEPSAVQMRKSASLSTAILTDWKDRFIKAYDVELQAFINDVKAGQLHGPSAWDGYAASVAADACIKAQGTSEPVEVTLPECPAFYKR
>NZ_CP018671.1|WP_004152193.1|3570022_3570907_+|sugar-phosphate-isomerase/epimerase
MKIAFDVDVIKDLGITRMVHQVAEWGYKYIEQSPHPQINPFYKHPRASREIMAEYKQALRDTGLELSSFICVYRWSGPDELRRQAAVKNWKRLVEIAVEMGVQVINTEFSGDPNQPEICDEMFYRSMEELLPIFEREGIRVEIQAHPWDFCEENNETVDIVKSFRSDNVKYVYSVPHTFFYDKGVGDVASMLRYAGSDLSHVLIADTRNHTKHCRYIVNPPGVDAVVHQHVGVGEGDVDFDALFRTLREMKFAEQTFKVGGEPIVATSLFGYPEKMKYQAVETRELIERELLRR
>NZ_CP018671.1|WP_002886970.1|3570930_3571830_+|myo-inosose-2-dehydratase
MNKDNVKLAIAPIGWTNDDMPELGSENTFQQIVSEMALAGFTGSEVGSKYPRDPAVLKPMLDIRGIQICNAWFSTFFANGQREKTIDEFVNHMNFLHAMGAKVIGCSEQSGSIQGLDKPILGDAKPCFSDEEWQRVAEGYNTLGRLAAEKGMQVCLHHHMGTGIQTTAEIDKFMSLVDERVFLLFDTGHAWYSEGGEAPMLAILKKYLPRINHVHLKDVRPPVIDQVRRDGLSFLDGVKKGTFTVPGDGVIDFRPVFKLLDDFGYKGWMVVEAEQDPALANPFEYAVKARKYIRETAGI
>NZ_CP018671.1|WP_016946338.1|3571973_3573284_-|ABC-transporter-substrate-binding-protein
MFKPLTLVAVGLSLALSGAALAKEKIDFMFPAPVDGKLTMEMTRVIKQFNDSQQDVEVRGIFTGNYDTTKIKAESAQKAGQPPALVIMSANFTTDLALKDEILPMDELFKYGDQKAGDFLHKEFWPAMHKNAQVMGTTYAIPFHNSTPILYYNKTMFDRAGIKQPPQTWAELLADAKKLTDESKGQWGIMLPSTNDDYGGWIFSALVRANGGKYFNEDYPGEVYYNSPTAIGALRFWQDLIYKDKVMPSGVLNSKQISAAFFSGKLGMAMLSTGALGFMRENSKDFELGVAMLPAKEQRAVPIGGASLVSFKGISEAQKKAAYQFLTYLVSPDVNGAWSRFTGYFSPRKASYDTPEMKAYLQQDPRAAIALEQLKYAHPWYSTWETVAVRKAMENQLAAVVNDAKVTPEAAVQAAQKEADALMKPYVDKTALAEVK
>NZ_CP018671.1|WP_016946339.1|3573423_3574494_-|ABC-transporter-ATP-binding-protein
MLSLQNISKRFDGKPALSALSLDIHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWLHDENITATTPRERNFAMIFQNYALFPHLSVRDNITFGMKVRKEEKSSWQPRVDKVAQMLQLEALLDRKPAKLSGGQRQRVAMARAIVRNPRLFLMDEPLSNLDARLRSEVRDSIMALHQQLKTSTIYVTHDQTEAMSMADRIVVMNGGHVQQVGRPEYLYANPANLFVAGFIGSPAMNLLSLPCANGEVLLGEQRHPLPPRHRDQTRVWLGVRPEHITDRVEEGHLRLPATVLQRELMGADYLLHVSTPIGNLRFSRRHRGTVPEKGESLPIGFSPADVHLFHAETQHNLAPVHQA
>NZ_CP018671.1|WP_064839899.1|3574499_3575324_-|phosphodiesterase
MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGNHDDKAHFLEHLHPLCPQLGNDPQNMHYAVDDFATRLLFIDSSHAGTSKGWLTDETIGWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTIPGTVHQVPYCHEDTRPYYDLSPASCLMHRQVGEQWVSYQHSLAHYAGPWLYDENISCPTEER
>NZ_CP018671.1|WP_009484068.1|3575334_3576222_-|carbohydrate-ABC-transporter-permease
MSAEISPLLVRTPAAARPLWLRLRRSSPFTLTVLMCCMALLWVSPFIWMLATSFSATTFGDDMASLLPRLPLTLDNFRDAWQSADWLSLYANTLIFTFGTFFVQLLTITTAGYVFACHEFRGKQTLFLLFLVQLMIMPVVMMVPNMLTLKTFGLLNTLTGVMMPYFTSAFGVFLMRQAFLAIPKELEEAALMEGCRWWQVLFRVLLPMSWPSVLAFATVSITYHWNEYLWPLMMLNDPDKQVLTVGLVSFAMGAESGGQWGTIGAGTLMVCLPLMLAFILFQKQFLRSFGFSGIK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

155532 : 161961

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|155532_156153_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_004190239.1\|156145_157411_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.9e-233	99.5
WP_002903955.1\|157422_158325_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_002210513.1\|158585_159347_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|159367_160228_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_004176262.1\|160525_160786_+	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_074075326.1\|160872_161961_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	6.8e-210	99.7

DBSCAN-SWA_2

2344221 : 2422752

uncultured_Caudovirales_phage(55.0%)

portal,head,protease,terminase,tRNA,integrase,capsid,tail

attL 2388661:2388681|attR 2404798:2404818

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004188423.1\|2344221_2344716_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
WP_002918467.1\|2344719_2345358_-	stringent starvation protein A	NA	NA	NA	NA
WP_135801240.1\|2345327_2345612_-	hypothetical protein	NA	NA	NA	NA
WP_000829818.1\|2345669_2346062_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002918559.1\|2346077_2346506_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004144945.1\|2346771_2347899_-	cell division protein ZapE	NA	NA	NA	NA
WP_002918565.1\|2348089_2348488_+	DUF1043 family protein	NA	NA	NA	NA
WP_004174125.1\|2348661_2350029_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918568.1\|2350116_2351175_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_071557112.1\|2351200_2351911_-	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA
WP_023282161.1\|2351970_2353272_-	oxalacetate decarboxylase subunit beta	NA	NA	NA	NA
WP_071556492.1\|2353287_2355060_-	sodium-extruding oxaloacetate decarboxylase subunit alpha	NA	NA	NA	NA
WP_071557113.1\|2355075_2355327_-	oxaloacetate decarboxylase subunit gamma	NA	NA	NA	NA
WP_004188410.1\|2355468_2356086_-	L(+)-tartrate dehydratase subunit beta	NA	NA	NA	NA
WP_004181427.1\|2356085_2356985_-	L(+)-tartrate dehydratase subunit alpha	NA	NA	NA	NA
WP_014906861.1\|2357017_2358286_-	SLC13/DASS family transporter	Q6A201	Oenococcus_phage	1.0e-60	33.5
WP_004181429.1\|2358497_2359163_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_071557114.1\|2359149_2359779_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002918570.1\|2359909_2360848_-	malate dehydrogenase	NA	NA	NA	NA
WP_002918625.1\|2361262_2361733_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918626.1\|2362108_2362372_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918627.1\|2362470_2362737_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918629.1\|2362787_2363063_-	barstar family protein	NA	NA	NA	NA
WP_002918632.1\|2363142_2365110_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918639.1\|2365115_2366048_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918640.1\|2366055_2366259_-	AaeX family protein	NA	NA	NA	NA
WP_002918641.1\|2366390_2367320_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_004144958.1\|2367355_2368801_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_071557115.1\|2368889_2372687_-	AsmA2 domain-containing protein YhdP	NA	NA	NA	NA
WP_002918644.1\|2372724_2374194_-	ribonuclease G	NA	NA	NA	NA
WP_071557116.1\|2374196_2374778_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918648.1\|2374785_2375274_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004149974.1\|2375273_2376266_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918653.1\|2376336_2377380_-	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_009309618.1\|2377685_2379626_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_004144963.1\|2379705_2379897_-	hypothetical protein	NA	NA	NA	NA
WP_002918688.1\|2380125_2381127_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_004185869.1\|2381126_2381735_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_004174104.1\|2381958_2382411_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918736.1\|2382433_2382901_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_004174096.1\|2382911_2384261_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918740.1\|2384371_2384614_+	YhdT family protein	NA	NA	NA	NA
WP_004181435.1\|2384603_2386055_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_004144971.1\|2386066_2386948_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_004144972.1\|2387305_2388271_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|2388295_2388592_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
2388661:2388681	attL	NA	NA	NA	NA
WP_071557117.1\|2388714_2388906_-	hypothetical protein	NA	NA	NA	NA
WP_128316279.1\|2388935_2389145_-	hypothetical protein	NA	NA	NA	NA
WP_071557118.1\|2389150_2391448_-\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	5.7e-158	46.6
WP_071557119.1\|2391459_2393121_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	2.7e-311	94.0
WP_071557120.1\|2393104_2393461_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	1.6e-59	97.5
WP_004150957.1\|2393589_2393742_-	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	2.4e-17	88.0
WP_071557121.1\|2393734_2394178_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	9.5e-78	90.5
WP_025861186.1\|2394177_2394471_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.8e-43	85.6
WP_071557122.1\|2394463_2394805_-\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	4.8e-21	46.1
WP_074075397.1\|2394801_2396037_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	5.7e-229	94.6
WP_071557124.1\|2396038_2396599_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	2.0e-96	92.5
WP_071557125.1\|2396650_2397811_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	6.5e-203	93.8
WP_071557126.1\|2398047_2398308_-	hypothetical protein	NA	NA	NA	NA
WP_071557127.1\|2398588_2400388_-	DNA primase	Q7M2A8	Enterobacteria_phage	1.4e-127	49.5
WP_071557128.1\|2400384_2400753_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	5.5e-55	87.7
WP_071557129.1\|2400755_2401049_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_135726243.1\|2401064_2401265_-	hypothetical protein	NA	NA	NA	NA
WP_071557130.1\|2401257_2401467_-	hypothetical protein	NA	NA	NA	NA
WP_077271523.1\|2401459_2401660_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_071557131.1\|2402512_2402719_-	AlpA family phage regulatory protein	A0A2H4JB58	uncultured_Caudovirales_phage	4.0e-23	77.6
WP_074075398.1\|2402796_2403552_-	hypothetical protein	NA	NA	NA	NA
WP_071557133.1\|2403548_2404772_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	2.8e-212	84.0
WP_021440791.1\|2405047_2405701_-	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
2404798:2404818	attR	NA	NA	NA	NA
WP_002919101.1\|2406079_2407219_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_071557134.1\|2407231_2410342_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_002919103.1\|2410634_2410856_+	membrane protein	NA	NA	NA	NA
WP_002919123.1\|2416830_2417385_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_002919125.1\|2417360_2417618_-	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_002919126.1\|2417614_2418433_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_002919132.1\|2418436_2419009_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
WP_004145330.1\|2419013_2419556_-	topoisomerase DNA-binding C4 zinc finger domain-containing protein	NA	NA	NA	NA
WP_002919137.1\|2419582_2420056_-	DUF494 domain-containing protein	NA	NA	NA	NA
WP_032428422.1\|2420027_2421152_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_004174081.1\|2421280_2421790_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.5e-18	40.3
WP_004150007.1\|2421804_2422752_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2

DBSCAN-SWA_3

3338395 : 3383664

Acidithiobacillus_phage(16.67%)

integrase,transposase

attL 3362102:3362117|attR 3385641:3385656

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064161743.1\|3338395_3339925_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	7.5e-122	45.9
WP_020802959.1\|3339935_3340679_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	1.0e-55	45.4
WP_074075422.1\|3340746_3342270_+	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA
WP_004115509.1\|3342294_3342696_-	hypothetical protein	NA	NA	NA	NA
WP_004115504.1\|3343288_3344083_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.8e-135	93.2
WP_004115503.1\|3344082_3345255_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	1.4e-213	91.5
WP_004115496.1\|3346268_3346787_-	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_004115492.1\|3346918_3347434_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.3e-30	48.8
WP_004115487.1\|3349008_3349200_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_074075423.1\|3349287_3352455_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_172751438.1\|3352454_3353666_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004115474.1\|3353951_3357392_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_048286510.1\|3357537_3357960_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_040118089.1\|3358257_3359199_-	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA
WP_004115466.1\|3359507_3359771_-	hypothetical protein	NA	NA	NA	NA
WP_053287298.1\|3359760_3360165_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004115463.1\|3360244_3362779_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.7e-142	44.9
3362102:3362117	attL	NA	NA	NA	NA
WP_004115460.1\|3362860_3363313_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_004115457.1\|3363410_3363875_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_004115454.1\|3363885_3366384_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.0e-91	33.8
WP_004115452.1\|3366594_3367605_+	cation diffusion facilitator family transporter	A0A1V0SED0	Indivirus	9.3e-20	26.0
WP_004115449.1\|3367654_3368014_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_097432954.1\|3368282_3369402_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.1e-45	40.5
WP_004115425.1\|3369715_3370696_-\|transposase	IS5 family transposase	Q38213	Escherichia_phage	1.6e-149	79.1
WP_004115446.1\|3370922_3372362_-	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.3e-48	29.0
WP_004115442.1\|3372481_3373057_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_004115439.1\|3373299_3373509_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_110229045.1\|3374193_3374382_+	DUF1656 domain-containing protein	NA	NA	NA	NA
WP_004115436.1\|3374384_3375257_+	HlyD family secretion protein	NA	NA	NA	NA
WP_032705156.1\|3375243_3377007_+	FUSC family protein	NA	NA	NA	NA
WP_004115430.1\|3376996_3377785_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_074075424.1\|3378745_3378940_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_071882578.1\|3379077_3379338_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_004115426.1\|3379568_3380585_-	nickel/cobalt efflux transporter RcnA	NA	NA	NA	NA
WP_004115425.1\|3380676_3381657_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	1.6e-149	79.1
WP_026056053.1\|3382764_3383664_+\|integrase	integrase domain-containing protein	NA	NA	NA	NA
3385641:3385656	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4062510 : 4073458

Enterobacteria_phage(50.0%)

integrase

attL 4058014:4058034|attR 4069401:4069421

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4058014:4058034	attL	NA	NA	NA	NA
WP_004191845.1\|4062510_4064274_-	DNA primase	Q7M2A8	Enterobacteria_phage	2.5e-105	43.8
WP_071556536.1\|4064270_4064585_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_014830796.1\|4064595_4064799_-	hypothetical protein	K7PHG9	Enterobacteria_phage	1.3e-13	53.2
WP_048336901.1\|4064914_4065790_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_071531908.1\|4065782_4065971_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_023301290.1\|4066328_4066901_-	hypothetical protein	A0A1W6JPH8	Morganella_phage	1.6e-56	65.7
WP_023301291.1\|4066921_4067134_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	4.9e-08	45.6
WP_099147915.1\|4067249_4067864_-	protein kinase	NA	NA	NA	NA
WP_020686322.1\|4068154_4069369_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.7e-132	55.7
WP_023316495.1\|4069724_4070978_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
4069401:4069421	attR	NA	NA	NA	NA
WP_004144574.1\|4070988_4072092_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
WP_004144576.1\|4072405_4073458_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.4e-111	57.9

DBSCAN-SWA_5

4759787 : 4772347

Stx2-converting_phage(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023283478.1\|4759787_4761326_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.1e-271	91.4
WP_117044057.1\|4761322_4761973_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_117044058.1\|4762426_4762540_+\|transposase	transposase	NA	NA	NA	NA
WP_074075460.1\|4762558_4762702_+\|transposase	transposase	NA	NA	NA	NA
WP_023283480.1\|4762949_4763471_+	CSS-motif domain-containing protein	NA	NA	NA	NA
WP_167876298.1\|4763653_4764505_+	EAL domain-containing protein	NA	NA	NA	NA
WP_077254091.1\|4766236_4766476_+	GrpB family protein	NA	NA	NA	NA
WP_023283484.1\|4766434_4766977_-	AAA family ATPase	A0A219VHB7	Ochrobactrum_phage	1.2e-21	55.8
WP_101982579.1\|4767662_4768891_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	5.2e-166	94.4
WP_032416054.1\|4769083_4770082_+	nitrilase family protein	NA	NA	NA	NA
WP_032415961.1\|4770169_4770568_-	hypothetical protein	NA	NA	NA	NA
WP_023283488.1\|4770945_4771545_-	LysE family translocator	NA	NA	NA	NA
WP_070083046.1\|4771738_4772347_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	4.0e-26	38.0

DBSCAN-SWA_6

4845212 : 4854676

Dickeya_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071556640.1\|4845212_4846328_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_071556641.1\|4846324_4848265_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|4848341_4848563_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|4848888_4849206_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|4849236_4851516_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|4851636_4851855_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|4852208_4852910_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_023158537.1\|4852954_4854676_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_7

5092188 : 5200105

133

Enterobacteria_phage(28.21%)

portal,holin,head,protease,plate,terminase,tRNA,integrase,capsid,tail

attL 5158352:5158369|attR 5194861:5194878

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004150803.1\|5092188_5093295_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004150802.1\|5093351_5093810_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004150801.1\|5093826_5094477_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004150800.1\|5094717_5095968_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_000741346.1\|5096080_5097223_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z02	Phage_21	9.1e-173	82.2
WP_000089156.1\|5097212_5097449_-	excisionase	NA	NA	NA	NA
WP_040176407.1\|5097749_5097968_-	hypothetical protein	G8C7S3	Escherichia_phage	3.5e-09	53.4
WP_040176408.1\|5097960_5098356_-	hypothetical protein	A0A077K9V6	Edwardsiella_phage	1.0e-06	33.8
WP_004864289.1\|5098352_5098868_-	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	2.9e-70	76.4
WP_074075471.1\|5099471_5100548_-	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	8.0e-147	74.1
WP_023158881.1\|5100675_5101461_-	hypothetical protein	A4JX52	Burkholderia_virus	2.2e-61	50.6
WP_040149782.1\|5101460_5101760_-	hypothetical protein	NA	NA	NA	NA
WP_004184742.1\|5102232_5103387_-	type I restriction enzyme HsdR N-terminal domain-containing protein	A0A1S5SAB0	Streptococcus_phage	1.5e-34	28.2
WP_074075472.1\|5103558_5104035_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	1.1e-12	45.3
WP_004197463.1\|5104136_5104400_+	helix-turn-helix domain-containing protein	D0UIL8	Aggregatibacter_phage	3.7e-13	47.9
WP_004184739.1\|5104428_5104881_+	hypothetical protein	K7PJS5	Enterobacterial_phage	1.5e-67	87.8
WP_071557781.1\|5105118_5105331_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	6.4e-16	70.9
WP_074075473.1\|5105287_5106202_+	conserved phage C-terminal domain-containing protein	H2DE83	Erwinia_phage	2.4e-30	56.3
WP_074075474.1\|5106198_5107008_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	1.6e-110	69.3
WP_000779146.1\|5107017_5107395_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.3e-48	73.6
WP_074075475.1\|5107407_5108388_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	7.1e-134	66.9
WP_032447794.1\|5108401_5108980_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.3e-50	57.2
WP_074075476.1\|5109055_5109652_-	hypothetical protein	NA	NA	NA	NA
WP_017145563.1\|5109781_5110177_+\|holin	phage holin family protein	K7PHB9	Enterobacterial_phage	2.6e-63	98.5
WP_019705280.1\|5110163_5110445_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.9e-37	80.6
WP_040221211.1\|5110444_5111074_+	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	3.1e-106	90.9
WP_074075477.1\|5111081_5111357_+	hypothetical protein	G8C7W1	Escherichia_phage	1.2e-17	57.3
WP_072060439.1\|5111737_5112088_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	8.6e-50	77.6
WP_065877869.1\|5112220_5112715_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	2.3e-80	90.7
WP_064143754.1\|5112711_5114442_+\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	1.3e-292	82.0
WP_165381876.1\|5114438_5114600_+	hypothetical protein	NA	NA	NA	NA
WP_074075479.1\|5114589_5115816_+\|portal	phage portal protein	Q8SBI0	Shigella_phage	1.2e-210	85.5
WP_000999827.1\|5115808_5116408_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.0e-90	82.5
WP_004104235.1\|5116417_5117656_+\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	6.8e-158	69.2
WP_019705272.1\|5117733_5118051_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	7.4e-24	52.9
WP_019705271.1\|5118059_5118398_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.6e-39	68.8
WP_019705270.1\|5118394_5118844_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	6.7e-63	82.6
WP_016530186.1\|5118840_5119188_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.8e-32	63.7
WP_023313062.1\|5119244_5119949_+	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	5.5e-80	66.9
WP_021313622.1\|5119979_5120384_+\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	8.5e-33	57.7
WP_032409576.1\|5120395_5120692_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	2.5e-26	63.9
WP_016530182.1\|5120764_5120998_+	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
WP_074075480.1\|5121058_5124445_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	2.5e-303	57.9
WP_023301979.1\|5124465_5124939_+	hypothetical protein	A0A286S298	Klebsiella_phage	4.6e-54	60.8
WP_023301978.1\|5124925_5125411_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	4.0e-53	66.2
WP_021313617.1\|5125420_5125801_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	2.1e-57	80.2
WP_032441726.1\|5125797_5128881_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	71.7
WP_181960471.1\|5128942_5131039_+	hypothetical protein	A0A1U9ZA50	Proteus_phage	3.1e-17	36.5
WP_074075481.1\|5131050_5131305_+	hypothetical protein	NA	NA	NA	NA
WP_074075482.1\|5131367_5131556_+	hypothetical protein	NA	NA	NA	NA
WP_074075483.1\|5131760_5132606_-	hypothetical protein	NA	NA	NA	NA
WP_024623019.1\|5134233_5134605_+	hypothetical protein	K7PGV5	Enterobacterial_phage	3.5e-25	50.0
WP_004892953.1\|5134783_5134936_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_004892950.1\|5135208_5135922_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023159861.1\|5135918_5136311_-	ACT domain protein	NA	NA	NA	NA
WP_065808332.1\|5136303_5136627_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_004225560.1\|5136746_5136923_-	hypothetical protein	NA	NA	NA	NA
WP_071556683.1\|5137076_5137304_-	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_004140529.1\|5137416_5138610_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_004190907.1\|5138677_5139013_-	hypothetical protein	NA	NA	NA	NA
WP_004150795.1\|5139232_5139418_+	general stress protein	NA	NA	NA	NA
WP_071556684.1\|5139508_5140003_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004140514.1\|5140029_5140536_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004179357.1\|5140552_5141440_+	manganese catalase family protein	NA	NA	NA	NA
WP_004140511.1\|5141495_5142902_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004140509.1\|5142898_5143909_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004140506.1\|5144024_5144222_-	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|5144788_5145421_+	DNA-binding protein	NA	NA	NA	NA
WP_004140501.1\|5145460_5145640_+	hypothetical protein	NA	NA	NA	NA
WP_004150790.1\|5146037_5146724_+	EAL domain-containing protein	NA	NA	NA	NA
WP_020804938.1\|5146836_5147001_-	hypothetical protein	NA	NA	NA	NA
WP_004140497.1\|5147034_5148543_-	UbiD family decarboxylase	NA	NA	NA	NA
WP_004150788.1\|5148663_5149554_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_071556685.1\|5149560_5151345_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_071556686.1\|5151418_5152627_-	HD domain-containing protein	NA	NA	NA	NA
WP_004892909.1\|5152929_5153973_+	type II asparaginase	NA	NA	NA	NA
WP_004148038.1\|5154634_5155549_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150783.1\|5155638_5156277_+	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004140489.1\|5156407_5156671_+	DUF2534 family protein	NA	NA	NA	NA
WP_004140488.1\|5156730_5156856_-	hypothetical protein	NA	NA	NA	NA
WP_004213093.1\|5156973_5157048_-	protein YoaJ	NA	NA	NA	NA
WP_004150782.1\|5157047_5157149_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_016531463.1\|5157206_5158220_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.1e-12	33.8
5158352:5158369	attL	NA	NA	NA	NA
WP_004131512.1\|5158485_5159469_-\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	8.4e-151	80.1
WP_004213095.1\|5159584_5159884_-	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	6.5e-38	77.8
WP_004131514.1\|5160004_5160283_+	regulatory phage cox family protein	Q1JS60	Enterobacteria_phage	5.3e-42	88.8
WP_004131515.1\|5160303_5160522_+	hypothetical protein	A0A0M5M1I3	Salmonella_phage	4.7e-06	49.1
WP_032720057.1\|5160537_5160915_+	hypothetical protein	NA	NA	NA	NA
WP_071556688.1\|5160930_5161203_+	hypothetical protein	NA	NA	NA	NA
WP_071556689.1\|5161271_5161496_+	hypothetical protein	NA	NA	NA	NA
WP_004131524.1\|5161492_5162059_+	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	5.5e-14	34.1
WP_071556690.1\|5162291_5163245_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	2.4e-86	56.0
WP_071556691.1\|5163244_5163514_+	hypothetical protein	NA	NA	NA	NA
WP_176678610.1\|5163513_5163669_+	hypothetical protein	NA	NA	NA	NA
WP_071556692.1\|5163644_5164673_+	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	1.0e-98	56.6
WP_071556693.1\|5164665_5167263_+	replication endonuclease	A0A1S6L028	Salmonella_phage	2.5e-242	56.4
WP_071556694.1\|5167265_5167784_+	hypothetical protein	NA	NA	NA	NA
WP_071556695.1\|5168117_5169965_-	ATP-binding protein	E5E3R2	Burkholderia_phage	2.5e-07	22.0
WP_024359494.1\|5170603_5171665_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	2.8e-144	68.7
WP_004213105.1\|5171658_5173386_-	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	3.1e-233	68.3
WP_074075487.1\|5173542_5174382_+\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.5e-95	66.3
WP_071556697.1\|5174392_5175427_+\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	1.8e-95	49.7
WP_064380603.1\|5175476_5176343_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	4.4e-71	58.5
WP_048024509.1\|5176447_5176963_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.8e-40	50.0
WP_045854925.1\|5176962_5177163_+\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	1.6e-16	64.6
WP_004213110.1\|5177153_5177438_+	hypothetical protein	NA	NA	NA	NA
WP_048299353.1\|5177434_5177980_+	lysozyme	Q1I0Z1	Pasteurella_virus	7.4e-32	44.1
WP_165790250.1\|5178166_5178502_+	peptidase	NA	NA	NA	NA
WP_032720044.1\|5178502_5178970_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	7.0e-47	59.5
WP_071556698.1\|5178966_5179602_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	7.3e-55	50.5
WP_071556699.1\|5179598_5180186_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.4e-52	56.0
WP_071556700.1\|5180182_5180533_+	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	3.5e-27	54.8
WP_071556701.1\|5180534_5181458_+\|plate	baseplate J/gp47 family protein	A0A0A7NPY5	Enterobacteria_phage	4.9e-52	42.9
WP_074075488.1\|5181447_5184477_+\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	8.4e-24	40.7
WP_024359481.1\|5184473_5184689_+	hypothetical protein	NA	NA	NA	NA
WP_071556703.1\|5184673_5185771_+\|tail	phage tail protein	A0A1J0GW57	Streptomyces_phage	4.0e-08	67.3
WP_071556704.1\|5186208_5187192_-	hypothetical protein	NA	NA	NA	NA
WP_071004935.1\|5187522_5187990_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	5.0e-53	62.7
WP_071556705.1\|5188005_5190981_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	1.2e-219	46.2
WP_053086776.1\|5190967_5191105_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	5.8e-10	65.9
WP_071556706.1\|5191125_5191443_-\|tail	phage tail protein	B9A7B2	Serratia_phage	1.8e-17	53.8
WP_032720030.1\|5191488_5192004_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	7.4e-58	61.8
WP_048978256.1\|5192003_5193176_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	8.5e-158	70.2
WP_071556707.1\|5193330_5194470_+	phage late control D family protein	B9A7A9	Serratia_phage	6.1e-145	70.7
WP_071556708.1\|5194513_5194765_+	ogr/Delta-like zinc finger family protein	A0A2I8TV89	Erwinia_phage	3.4e-08	49.2
WP_004176548.1\|5195029_5195269_+	DUF333 domain-containing protein	NA	NA	NA	NA
5194861:5194878	attR	NA	NA	NA	NA
WP_014343000.1\|5195258_5195597_-	DUF488 family protein	NA	NA	NA	NA
WP_004176547.1\|5195601_5196111_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004140471.1\|5196256_5196949_+	CTP synthase	NA	NA	NA	NA
WP_020324105.1\|5196980_5198156_-	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_004224197.1\|5198263_5199058_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002901080.1\|5199041_5199488_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_002901088.1\|5199604_5200105_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP018670

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 5005

Ochrobactrum_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029497408.1\|766_1249_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_094645258.1\|1236_1524_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_074075300.1\|1748_2114_+	hypothetical protein	NA	NA	NA	NA
WP_008460272.1\|2157_2895_+	HupE/UreJ family protein	NA	NA	NA	NA
WP_004196322.1\|2908_3598_+	hypothetical protein	NA	NA	NA	NA
WP_004196363.1\|3628_5005_-	chromate efflux transporter	A0A219VHC2	Ochrobactrum_phage	1.6e-27	64.6

DBSCAN-SWA_2

12224 : 32323

Escherichia_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094645257.1\|12224_13594_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	3.8e-77	70.0
WP_004182064.1\|13793_14168_-	hypothetical protein	NA	NA	NA	NA
WP_004194231.1\|14223_14550_-	hypothetical protein	NA	NA	NA	NA
WP_015065618.1\|14546_15275_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_004194235.1\|15271_15703_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_020277924.1\|15747_17805_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	5.3e-22	25.4
WP_032431380.1\|17874_18123_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_063445496.1\|18171_18714_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.0e-49	76.7
WP_032431403.1\|19432_19753_-	hypothetical protein	NA	NA	NA	NA
WP_011977779.1\|19787_20042_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.0e-12	48.8
WP_001568047.1\|20228_20420_-	hypothetical protein	NA	NA	NA	NA
WP_013214014.1\|20462_20969_-	antirestriction protein ArdA	G9FHQ1	Rhodococcus_virus	1.2e-07	31.4
WP_032435770.1\|21011_21440_-	antirestriction protein	NA	NA	NA	NA
WP_013214013.1\|22119_22887_-	hypothetical protein	NA	NA	NA	NA
WP_001568043.1\|22940_23360_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001568042.1\|23369_23591_-	hypothetical protein	NA	NA	NA	NA
WP_001568041.1\|23590_24292_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2
WP_001568040.1\|24728_24959_-	hypothetical protein	NA	NA	NA	NA
WP_032435767.1\|25021_25693_-	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_064182005.1\|25695_26667_-	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
WP_001568036.1\|26900_27332_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
WP_074075301.1\|27331_28603_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.8e-152	63.7
WP_001568034.1\|28684_29659_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.5
WP_011977818.1\|29658_30864_-	AAA family ATPase	A0A077SL49	Escherichia_phage	5.3e-163	69.3
WP_042938944.1\|31567_32323_-	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	3.4e-136	95.6

DBSCAN-SWA_3

39504 : 90720

Stx2-converting_phage(47.37%)

transposase,integrase

attL 35716:35731|attR 66047:66062

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
35716:35731	attL	NA	NA	NA	NA
WP_032741643.1\|39504_40440_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	9.6e-72	53.8
WP_077274102.1\|40585_41374_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.5e-49	89.3
WP_074075305.1\|41370_42051_-	hypothetical protein	NA	NA	NA	NA
WP_124074497.1\|42093_42429_-	hypothetical protein	NA	NA	NA	NA
WP_074075320.1\|42575_43037_-	hypothetical protein	NA	NA	NA	NA
WP_001261282.1\|42993_43224_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001044770.1\|43220_43637_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_004206609.1\|43710_45273_+	AAA family ATPase	NA	NA	NA	NA
WP_000361404.1\|45257_46280_+	helicase UvrD	NA	NA	NA	NA
WP_031592169.1\|46817_47732_+	HNH endonuclease	NA	NA	NA	NA
WP_004187110.1\|47917_48268_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	6.0e-19	51.4
WP_074075306.1\|48415_48847_-	silver-binding protein SilE	NA	NA	NA	NA
WP_000555737.1\|49097_50573_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_000697969.1\|50565_51246_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	36.0
WP_023292107.1\|51435_52821_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246153.1\|52849_53203_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_004098959.1\|53316_54609_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_004098958.1\|54619_57766_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	4.0e-61	22.5
WP_000758228.1\|57852_58293_+	hypothetical protein	NA	NA	NA	NA
WP_004098955.1\|58419_60867_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	35.8
WP_000843497.1\|60907_61105_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004118669.1\|61138_61876_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_001023257.1\|62164_62614_-	copper resistance protein	NA	NA	NA	NA
WP_000925242.1\|62847_64665_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_001378118.1\|64670_65561_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000025662.1\|65600_65981_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_004118344.1\|65985_66915_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
66047:66062	attR	NA	NA	NA	NA
WP_001188930.1\|66969_67650_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_074075307.1\|67646_69047_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	5.4e-18	26.3
WP_074075308.1\|69264_69699_+	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
WP_064163798.1\|69826_71398_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.8e-170	58.9
WP_000624622.1\|71417_71765_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_001339397.1\|71764_72442_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_004118688.1\|72784_72883_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_004118349.1\|72869_73049_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_009310051.1\|73362_73626_+	hypothetical protein	NA	NA	NA	NA
WP_009310052.1\|73622_74189_+	hypothetical protein	NA	NA	NA	NA
WP_009310053.1\|74219_74714_+	hypothetical protein	NA	NA	NA	NA
WP_009310054.1\|74757_75126_+	hypothetical protein	NA	NA	NA	NA
WP_004098931.1\|75156_75360_+	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_004098928.1\|75408_75666_+	hypothetical protein	NA	NA	NA	NA
WP_004118702.1\|75741_75996_+	hypothetical protein	NA	NA	NA	NA
WP_076611902.1\|76205_77552_+\|transposase	ISNCY-like element ISLad2 family transposase	NA	NA	NA	NA
WP_032414145.1\|77610_78414_+	hypothetical protein	NA	NA	NA	NA
WP_032414142.1\|78427_79789_+	FRG domain-containing protein	NA	NA	NA	NA
WP_016239970.1\|79941_80382_+	hypothetical protein	NA	NA	NA	NA
WP_072030980.1\|80399_81206_+	SecC motif-containing protein	NA	NA	NA	NA
WP_064357852.1\|81456_82233_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_017899891.1\|82473_82797_-	hypothetical protein	NA	NA	NA	NA
WP_013023770.1\|84192_85374_+	DUF4268 domain-containing protein	NA	NA	NA	NA
WP_074075310.1\|85808_87398_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.1e-188	65.7
WP_032414478.1\|87427_87778_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	3.1e-39	64.7
WP_015632445.1\|87774_88182_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	1.4e-14	40.2
WP_023290558.1\|88385_89924_-\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.9e-280	94.3
WP_074075311.1\|89983_90319_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	1.5e-59	100.0
WP_023290559.1\|90315_90720_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.6e-68	97.8

DBSCAN-SWA_4

95584 : 98483

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064357907.1\|95584_96697_-	alcohol dehydrogenase catalytic domain-containing protein	A0A2K9L339	Tupanvirus	8.1e-09	25.6
WP_064357835.1\|97045_97510_+	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA
WP_064357833.1\|97532_98483_+	transaldolase	A0A1D8KMI9	Synechococcus_phage	4.6e-13	36.7

DBSCAN-SWA_5

104523 : 105270

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032693911.1\|104523_105270_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.1e-25	37.9

DBSCAN-SWA_6

110330 : 114326

Wolbachia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048338015.1\|110330_110810_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	3.1e-18	34.0
WP_071836379.1\|110793_113796_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	62.5
WP_003100847.1\|113768_114326_-	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2

DBSCAN-SWA_7

118036 : 129941

uncultured_Caudovirales_phage(77.78%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004118540.1\|118036_118594_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	8.4e-39	47.2
WP_004118538.1\|118725_119058_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_011977829.1\|119411_120560_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.7e-123	65.9
WP_004118534.1\|120834_121209_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	4.5e-28	56.0
WP_001549953.1\|121737_122934_+	MFS transporter	NA	NA	NA	NA
WP_004118529.1\|123005_123833_-	universal stress protein	NA	NA	NA	NA
WP_001549885.1\|123851_125330_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.6e-198	74.0
WP_001549886.1\|125813_126167_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	5.9e-22	57.1
WP_001549887.1\|126262_127546_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.9e-175	74.6
WP_001549888.1\|127595_128024_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	70.7
WP_025801347.1\|128081_128795_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	5.1e-97	73.4
WP_001549890.1\|128800_129133_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_009309887.1\|129629_129941_-	hypothetical protein	K7PKY8	Enterobacterial_phage	2.1e-15	40.0

DBSCAN-SWA_8

166813 : 171770

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019445.1\|166813_167794_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_020805752.1\|168440_168833_-	relaxosome protein TraM	NA	NA	NA	NA
WP_020316636.1\|169264_169744_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_020277941.1\|169781_170312_-	antirestriction protein	A0A1S5R3R9	Pseudomonas_phage	4.4e-05	32.6
WP_020277940.1\|170936_171770_-	N-6 DNA methylase	A0A2K9V411	Faecalibacterium_phage	3.1e-21	34.7

DBSCAN-SWA_9

176221 : 180420

uncultured_Caudovirales_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000323025.1\|176221_176509_-	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000534858.1\|176508_176748_-	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_020277922.1\|177010_177934_-	cation transporter	NA	NA	NA	NA
WP_001515348.1\|178133_178706_-	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA
WP_003030308.1\|179181_180420_-\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	2.4e-09	22.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018669

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018671

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP018670

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection