CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP018675	Klebsiella pneumoniae strain CAV1217 plasmid pKPC_CAV1217, complete sequence	0 crisprs	RT,csa3	2
NZ_CP018676	Klebsiella pneumoniae strain CAV1217 chromosome, complete genome	2 crisprs	DinG,DEDDh,csa3,cas3,WYL,RT	13
NZ_CP018672	Klebsiella pneumoniae strain CAV1217 plasmid pCAV1217-9294, complete sequence	0 crisprs	NA	0
NZ_CP018673	Klebsiella pneumoniae strain CAV1217 extrachromosomal	0 crisprs	NA	0
NZ_CP018674	Klebsiella pneumoniae strain CAV1217 plasmid pCAV1217-71, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

43669 : 101774

uncultured_Caudovirales_phage(29.41%)

transposase,protease,integrase

attL 35412:35426|attR 56505:56519

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
35412:35426	attL	NA	NA	NA	NA
WP_001515717.1\|43669_44410_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	58.6
WP_004099053.1\|45016_45985_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	5.1e-185	98.8
WP_004152065.1\|46619_47567_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.8e-12	30.6
WP_071527918.1\|47593_47905_-	EAL domain-containing protein	NA	NA	NA	NA
WP_011977741.1\|47924_48893_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.5e-184	98.1
WP_004197688.1\|49565_49823_-	hypothetical protein	NA	NA	NA	NA
WP_020444838.1\|50424_51879_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004152070.1\|52861_54139_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_004178088.1\|54201_56199_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
WP_085955172.1\|57238_58446_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
56505:56519	attR	NA	NA	NA	NA
WP_004178091.1\|59874_60306_-	silver-binding protein SilE	NA	NA	NA	NA
WP_003032875.1\|60556_62032_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_001572351.1\|62024_62705_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	35.6
WP_000475512.1\|62894_64280_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246153.1\|64308_64662_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_004152079.1\|64775_66068_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_004098958.1\|66078_69225_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	4.0e-61	22.5
WP_000758228.1\|69311_69752_+	hypothetical protein	NA	NA	NA	NA
WP_004098955.1\|69878_72326_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	35.8
WP_000843497.1\|72366_72564_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004118669.1\|72597_73335_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_001023257.1\|73623_74073_-	copper resistance protein	NA	NA	NA	NA
WP_000925242.1\|74306_76124_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_001242438.1\|76123_77020_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000025662.1\|77059_77440_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_004118344.1\|77444_78374_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_001188930.1\|78428_79109_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_004152084.1\|79105_80506_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
WP_004152085.1\|80722_81157_+	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
WP_004152086.1\|81388_81568_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_031944101.1\|83310_83820_+	major intrinsic protein MIP	NA	NA	NA	NA
WP_004152091.1\|83869_84367_-	N-acetyltransferase	NA	NA	NA	NA
WP_004152092.1\|84698_85025_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004152093.1\|85021_85735_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-92	77.0
WP_004182005.1\|85743_86289_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_004152095.1\|86364_86727_+	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_004152096.1\|88623_89160_+	N-acetyltransferase	NA	NA	NA	NA
WP_004152097.1\|89192_89618_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	72.9
WP_004152098.1\|89630_90920_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
WP_004152099.1\|90967_92719_-	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_004152100.1\|92736_93099_-	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_004152101.1\|93148_93499_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_004152102.1\|93856_94126_+	hypothetical protein	NA	NA	NA	NA
WP_004152103.1\|94113_94689_+	hypothetical protein	NA	NA	NA	NA
WP_004152104.1\|94719_95214_+	DNA-binding protein	NA	NA	NA	NA
WP_004152105.1\|95257_95626_+	hypothetical protein	NA	NA	NA	NA
WP_004152106.1\|95659_95863_+	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_004152107.1\|95911_96169_+	hypothetical protein	NA	NA	NA	NA
WP_004152108.1\|96244_96499_+	hypothetical protein	NA	NA	NA	NA
WP_003026799.1\|96674_96941_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_003026803.1\|96928_97411_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_020314316.1\|97622_98969_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004152113.1\|100811_101774_-\|protease	M48 family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

107261 : 165695

Escherichia_phage(50.0%)

integrase,transposase,bacteriocin

attL 116123:116182|attR 159612:160433

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004118209.1\|107261_107525_+\|transposase	transposase	NA	NA	NA	NA
WP_000019473.1\|108726_109707_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004152692.1\|110915_111785_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152693.1\|111778_112789_-	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.4e-15	25.1
WP_004152694.1\|112797_113625_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_004152695.1\|113633_114497_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004153729.1\|114493_115321_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
116123:116182	attL	NA	NA	NA	NA
WP_001067855.1\|116176_116881_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_104022016.1\|116916_122169_+	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
WP_004152303.1\|122248_122974_+	type-F conjugative transfer system pilin acetylase TraX	A0A1D6ZIU7	Xanthomonas_phage	5.5e-06	29.4
WP_004178053.1\|123132_123729_+	fertility inhibition protein FinO	NA	NA	NA	NA
WP_004152301.1\|123748_124096_+	hypothetical protein	NA	NA	NA	NA
WP_004178052.1\|124310_124856_-	hypothetical protein	NA	NA	NA	NA
WP_004178051.1\|125212_127534_+\|bacteriocin	klebicin B-related nuclease bacteriocin	NA	NA	NA	NA
WP_004152296.1\|127535_127814_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_009485932.1\|128154_128634_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	9.8e-20	35.2
WP_004199332.1\|128954_129233_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_004171457.1\|129449_129527_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_004152292.1\|129519_130377_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_072093215.1\|130427_130586_+	hypothetical protein	NA	NA	NA	NA
WP_032408758.1\|130670_130805_-	hypothetical protein	NA	NA	NA	NA
WP_004193160.1\|131044_131263_-	hypothetical protein	NA	NA	NA	NA
WP_158648848.1\|131560_131731_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_004152397.1\|132049_133369_+\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_015062847.1\|133618_134500_-	carbapenem-hydrolyzing class A beta-lactamase KPC-4	A0A1B0VBP7	Salmonella_phage	1.1e-74	52.5
WP_004152394.1\|134886_135666_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004199214.1\|135662_136688_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152392.1\|136794_139824_-\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004152391.1\|139933_141649_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_000602738.1\|143156_143909_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_104022036.1\|144330_145356_-	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA
WP_001199192.1\|145584_146361_-	aminoglycoside N-acetyltransferase AAC(3)-IV	NA	NA	NA	NA
WP_158649105.1\|146474_146894_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.3e-71	100.0
WP_001067855.1\|146905_147610_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000496058.1\|148779_149097_-	hypothetical protein	NA	NA	NA	NA
WP_001749962.1\|149146_149440_-	hypothetical protein	NA	NA	NA	NA
WP_000440698.1\|149449_149731_-	hypothetical protein	NA	NA	NA	NA
WP_001749963.1\|149739_150474_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_024129965.1\|150537_150888_+	H-NS histone family protein	NA	NA	NA	NA
WP_001749964.1\|150903_151248_+	hypothetical protein	NA	NA	NA	NA
WP_001749965.1\|151244_151559_+	KikA protein	NA	NA	NA	NA
WP_001452736.1\|151594_151906_+	hypothetical protein	NA	NA	NA	NA
WP_104022057.1\|152114_152603_+	restriction endonuclease	NA	NA	NA	NA
WP_001749967.1\|152607_152814_+	hypothetical protein	NA	NA	NA	NA
WP_104022030.1\|153195_154629_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_004098817.1\|154662_155877_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001389365.1\|156137_156902_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_000376623.1\|157408_157909_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|158036_158876_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|158869_159217_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001067855.1\|159665_160370_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_020277917.1\|160840_161614_+	SDR family oxidoreductase	NA	NA	NA	NA
159612:160433	attR	NA	NA	NA	NA
WP_020277915.1\|163075_164044_-	AAA family ATPase	NA	NA	NA	NA
WP_033488203.1\|164033_165695_-\|transposase	IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018676

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018676_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018676_1

3517824-3517909

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018676_1

>merge|NZ_CP018676|1|3517824-3517909|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP018676|1|1|3517824-3517909|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018676.1\|WP_004151368.1\|3520836_3523743_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP018676.1\|WP_004219851.1\|3530700_3530871_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018676.1\|WP_002888370.1\|3530856_3531702_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP018676.1\|WP_002888320.1\|3506794_3507274_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP018676.1\|WP_002888345.1\|3518006_3519371_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP018676.1\|WP_002888324.1\|3508762_3509584_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP018676.1\|WP_002888368.1\|3528809_3530519_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP018676.1\|WP_002888327.1\|3509580_3510570_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP018676.1\|WP_004147026.1\|3511916_3514265_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP018676.1\|WP_002888332.1\|3514508_3515336_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP018676.1\|WP_002888348.1\|3520164_3520824_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP018676.1\|WP_002888357.1\|3527296_3528799_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP018676.1\|WP_002888323.1\|3508382_3508760_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP018676.1\|WP_002888347.1\|3519550_3520090_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP018676.1\|WP_002888321.1\|3507529_3508378_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP018676.1\|WP_002888340.1\|3516056_3517682_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP018676.1\|WP_002888349.1\|3523930_3526288_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP018676.1\|WP_002888353.1\|3526463_3527159_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP018676.1\|WP_002888337.1\|3515368_3516067_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP018676.1\|WP_002888329.1\|3510575_3511862_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758

Protein	Function_ID	Function_description	E-value
NZ_CP018676.1\|WP_004151368.1\|3520836_3523743_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP018676.1\|WP_002888370.1\|3530856_3531702_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP018676.1\|WP_002888320.1\|3506794_3507274_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP018676.1\|WP_002888345.1\|3518006_3519371_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP018676.1\|WP_002888324.1\|3508762_3509584_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP018676.1\|WP_002888368.1\|3528809_3530519_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP018676.1\|WP_002888327.1\|3509580_3510570_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP018676.1\|WP_004147026.1\|3511916_3514265_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP018676.1\|WP_002888332.1\|3514508_3515336_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP018676.1\|WP_002888348.1\|3520164_3520824_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP018676.1\|WP_002888357.1\|3527296_3528799_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP018676.1\|WP_002888323.1\|3508382_3508760_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP018676.1\|WP_002888347.1\|3519550_3520090_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP018676.1\|WP_002888321.1\|3507529_3508378_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP018676.1\|WP_002888340.1\|3516056_3517682_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP018676.1\|WP_002888349.1\|3523930_3526288_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP018676.1\|WP_002888353.1\|3526463_3527159_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP018676.1\|WP_002888337.1\|3515368_3516067_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP018676.1\|WP_002888329.1\|3510575_3511862_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0

>NZ_CP018676.1|WP_002888340.1|3516056_3517682_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP018676.1|WP_002888337.1|3515368_3516067_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP018676.1|WP_002888332.1|3514508_3515336_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP018676.1|WP_004147026.1|3511916_3514265_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP018676.1|WP_002888329.1|3510575_3511862_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP018676.1|WP_002888327.1|3509580_3510570_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP018676.1|WP_002888324.1|3508762_3509584_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP018676.1|WP_002888323.1|3508382_3508760_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP018676.1|WP_002888321.1|3507529_3508378_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP018676.1|WP_002888320.1|3506794_3507274_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP018676.1|WP_002888345.1|3518006_3519371_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP018676.1|WP_002888347.1|3519550_3520090_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP018676.1|WP_002888348.1|3520164_3520824_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP018676.1|WP_004151368.1|3520836_3523743_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP018676.1|WP_002888349.1|3523930_3526288_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP018676.1|WP_002888353.1|3526463_3527159_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP018676.1|WP_002888357.1|3527296_3528799_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP018676.1|WP_002888368.1|3528809_3530519_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP018676.1|WP_004219851.1|3530700_3530871_-|hypothetical-protein
MRFGHTRGSPRRYQWHQLSIFIILSLSALSRLRRRWEFGEKPAQQAKKAPAACIPP
>NZ_CP018676.1|WP_002888370.1|3530856_3531702_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE

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Crispr_ID: NZ_CP018676_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018676_2

4286607-4286684

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018676_2

>merge|NZ_CP018676|2|4286607-4286684|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP018676|2|2|4286607-4286684|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018676.1\|WP_000427614.1\|4273260_4274265_-\|IS110-like-element-IS5075-family-transposase	unknown	unknown	gnl\|CDD\|226077
NZ_CP018676.1\|WP_002895658.1\|4296179_4297277_-\|two-component-system-sensor-histidine-kinase-PmrB	unknown	unknown	gnl\|CDD\|236751
NZ_CP018676.1\|WP_004142100.1\|4291064_4291820_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP018676.1\|WP_002895578.1\|4287383_4288673_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP018676.1\|WP_004151700.1\|4289923_4291081_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP018676.1\|WP_002895648.1\|4291812_4292535_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP018676.1\|WP_004151698.1\|4279479_4280436_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP018676.1\|WP_103857332.1\|4283050_4284577_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP018676.1\|WP_002895283.1\|4274577_4275084_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018676.1\|WP_104022033.1\|4276719_4278009_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP018676.1\|WP_004152853.1\|4292476_4293199_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP018676.1\|WP_002895575.1\|4286836_4287313_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP018676.1\|WP_002895652.1\|4293285_4293498_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018676.1\|WP_004147672.1\|4284675_4286058_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP018676.1\|WP_002895655.1\|4293909_4295931_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP018676.1\|WP_014342949.1\|4282115_4283054_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP018676.1\|WP_002895580.1\|4288886_4289927_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP018676.1\|WP_004153329.1\|4278163_4279483_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP018676.1\|WP_002895358.1\|4280497_4281223_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP018676.1\|WP_002895284.1\|4275100_4276024_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225813

Protein	Function_ID	Function_description	E-value
NZ_CP018676.1\|WP_000427614.1\|4273260_4274265_-\|IS110-like-element-IS5075-family-transposase	gnl\|CDD\|226077	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.96014e-36
NZ_CP018676.1\|WP_004142100.1\|4291064_4291820_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP018676.1\|WP_002895658.1\|4296179_4297277_-\|two-component-system-sensor-histidine-kinase-PmrB	gnl\|CDD\|236751	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB.	0
NZ_CP018676.1\|WP_004151700.1\|4289923_4291081_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP018676.1\|WP_002895648.1\|4291812_4292535_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP018676.1\|WP_004151698.1\|4279479_4280436_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
NZ_CP018676.1\|WP_103857332.1\|4283050_4284577_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP018676.1\|WP_004147672.1\|4284675_4286058_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP018676.1\|WP_104022033.1\|4276719_4278009_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP018676.1\|WP_004152853.1\|4292476_4293199_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
NZ_CP018676.1\|WP_002895575.1\|4286836_4287313_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP018676.1\|WP_002895578.1\|4287383_4288673_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP018676.1\|WP_002895655.1\|4293909_4295931_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP018676.1\|WP_014342949.1\|4282115_4283054_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP018676.1\|WP_002895580.1\|4288886_4289927_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP018676.1\|WP_004153329.1\|4278163_4279483_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP018676.1\|WP_002895358.1\|4280497_4281223_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP018676.1\|WP_002895284.1\|4275100_4276024_-\|acyltransferase-family-protein	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09

>NZ_CP018676.1|WP_004147672.1|4284675_4286058_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP018676.1|WP_103857332.1|4283050_4284577_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAVENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP018676.1|WP_014342949.1|4282115_4283054_+|urocanate-hydratase
MKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP018676.1|WP_002895358.1|4280497_4281223_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP018676.1|WP_004151698.1|4279479_4280436_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>NZ_CP018676.1|WP_004153329.1|4278163_4279483_+|imidazolonepropionase
MVFSHKKITFPCAIVDFTGVMKINVYTTHDKLSAMTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP018676.1|WP_104022033.1|4276719_4278009_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP018676.1|WP_002895284.1|4275100_4276024_-|acyltransferase-family-protein
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>NZ_CP018676.1|WP_002895283.1|4274577_4275084_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>NZ_CP018676.1|WP_000427614.1|4273260_4274265_-|IS110-like-element-IS5075-family-transposase
MENIALIGIDLGKNSFHIHCQDHRGKAVYRKKFTRPKLIEFLATCPATTIAMEACGGSHFMARKLAELGHFPKLISPQFVRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGISVPRGAAVISRLSTLLEDSSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLKRKLDEDEVGQRLLSIPCVGTLTASTISTEIGDGKQYASSRDFAAATGLVPRQYSTGGRTTLLGISKRGNKKIRTLLVQCARVFIQKLEHQSGKLADWVRELLCRKSNFVVTCALANKLARIAWALTARQQTYEA
>NZ_CP018676.1|WP_002895575.1|4286836_4287313_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP018676.1|WP_002895578.1|4287383_4288673_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP018676.1|WP_002895580.1|4288886_4289927_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP018676.1|WP_004151700.1|4289923_4291081_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP018676.1|WP_004142100.1|4291064_4291820_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP018676.1|WP_002895648.1|4291812_4292535_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP018676.1|WP_004152853.1|4292476_4293199_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP018676.1|WP_002895652.1|4293285_4293498_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP018676.1|WP_002895655.1|4293909_4295931_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP018676.1|WP_002895658.1|4296179_4297277_-|two-component-system-sensor-histidine-kinase-PmrB
MALFATETWTMRHRLLLTIGAILVVCQLISVFWLWHESKEQIQLLVASAIEGHNNQKHVEHEVREAVASLLVPSLLIVGLALYISMLAVRKITRPLSRLQSELENRTPDNLTPIVLSESVPEVTAVTTALNQLVSRLNLTLDRERLFTADVAHELRTPLAGLRLHLELLAKVHGMGVDPLIQRLDQMTTSISQLLQLARVGQSFSAGSYQQVLLLDDVVKPLQDELEAMLAQRQQRLLLTDIENEAVVSGDATLIGVILRNLVENAHRYSPEGSTIRVSVKAGLMPVMAVEDEGPGIDEAKSGELSKAFVRMDSRYGGIGLGLSIVTRIAQLHDAQFFLHNRQPGPGVRAWVLFPQRGGQNVSTH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

133470 : 142884

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|133470_134091_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_004151609.1\|134083_135349_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_004151610.1\|135360_136263_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_002210513.1\|136523_137285_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004176269.1\|137305_138166_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002904006.1\|138463_138724_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_001620097.1\|138810_139899_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004151612.1\|139929_141195_-	MFS transporter	NA	NA	NA	NA
WP_160463746.1\|141249_142884_-	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	3.1e-182	55.8

DBSCAN-SWA_2

630878 : 687145

Microcystis_virus(27.27%)

plate,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175538.1\|630878_631322_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_020806091.1\|631324_631861_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_072198475.1\|631841_632858_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_032411805.1\|632887_634651_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_032411808.1\|634784_638195_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_002910497.1\|639344_639611_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_072093174.1\|639908_640094_-	hypothetical protein	NA	NA	NA	NA
WP_072093175.1\|640354_640489_-	hypothetical protein	NA	NA	NA	NA
WP_014343198.1\|640831_641404_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	3.9e-07	33.3
WP_004164123.1\|641367_641721_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA
WP_064182053.1\|641896_642670_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	1.2e-11	28.1
WP_038435084.1\|642811_642940_-	hypothetical protein	NA	NA	NA	NA
WP_016946122.1\|642965_643859_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.7e-12	27.3
WP_032410376.1\|643880_643997_-	hypothetical protein	NA	NA	NA	NA
WP_060614315.1\|644042_644936_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	1.1e-13	30.5
WP_014343204.1\|644957_645269_-	hypothetical protein	NA	NA	NA	NA
WP_072198474.1\|645286_646315_-	hypothetical protein	NA	NA	NA	NA
WP_015958632.1\|646776_647283_-	hypothetical protein	NA	NA	NA	NA
WP_004200304.1\|647279_647789_-	hypothetical protein	NA	NA	NA	NA
WP_032425067.1\|647789_649145_-	S-type Pyocin	NA	NA	NA	NA
WP_060614320.1\|649438_649948_-	hypothetical protein	NA	NA	NA	NA
WP_002910591.1\|650184_650691_-	hypothetical protein	NA	NA	NA	NA
WP_032425068.1\|650687_651197_-	hypothetical protein	NA	NA	NA	NA
WP_072198477.1\|651273_652242_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.9e-172	91.3
WP_032425069.1\|652286_653618_-	S-type Pyocin	NA	NA	NA	NA
WP_032425070.1\|653641_656128_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_032425071.1\|656586_658284_-	OmpA family protein	NA	NA	NA	NA
WP_004184632.1\|658287_658941_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004899025.1\|658937_660278_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_032423435.1\|660515_660677_-	hypothetical protein	NA	NA	NA	NA
WP_002910650.1\|660846_661176_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_002910652.1\|661290_661830_+	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_072159826.1\|661855_662647_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	3.0e-05	27.2
WP_002910657.1\|662744_663227_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_020801945.1\|663336_664236_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004145468.1\|664210_665020_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_032425072.1\|665031_666327_-	MFS transporter	Q6JIH2	Burkholderia_virus	7.4e-62	36.8
WP_020801827.1\|666630_667557_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910717.1\|667655_668132_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004180410.1\|668181_669825_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
WP_002910720.1\|670108_671002_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004175491.1\|671007_671727_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-11	26.0
WP_032425073.1\|671723_672599_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	9.5e-05	41.5
WP_060614333.1\|672595_673882_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_004175489.1\|673891_674806_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_075995074.1\|674915_675974_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004225356.1\|676263_676410_+	hypothetical protein	NA	NA	NA	NA
WP_032425474.1\|676461_678756_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	7.4e-158	41.7
WP_032425074.1\|678784_679993_-	propionate kinase	NA	NA	NA	NA
WP_004145486.1\|680020_681352_-	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_002910762.1\|681377_682367_-	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_023286625.1\|682460_683402_-	transcriptional regulator TdcA	NA	NA	NA	NA
WP_004219597.1\|683578_683722_+	hypothetical protein	NA	NA	NA	NA
WP_004145488.1\|684019_684142_+	nitrilotriacetate monooxygenase	NA	NA	NA	NA
WP_032425076.1\|684973_685960_-	fatty acid desaturase	NA	NA	NA	NA
WP_032425077.1\|686398_687145_-\|protease	proteasome-type protease	NA	NA	NA	NA

DBSCAN-SWA_3

885403 : 897345

Escherichia_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180506.1\|885403_886819_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.4e-53	31.0
WP_038435495.1\|887898_888903_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.4e-31	29.5
WP_001741931.1\|888972_889113_+	hypothetical protein	NA	NA	NA	NA
WP_004144151.1\|889303_889426_+	small membrane protein	NA	NA	NA	NA
WP_004099053.1\|889678_890647_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	5.1e-185	98.8
WP_000704907.1\|890915_892082_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.7
WP_040230680.1\|892263_892818_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.3e-52	58.2
WP_040230682.1\|892832_893723_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	9.6e-29	34.2
WP_023278825.1\|893754_894624_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.7e-110	66.7
WP_075995067.1\|894650_895715_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.9e-104	54.7
WP_000043542.1\|895938_897345_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

DBSCAN-SWA_4

938169 : 945074

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004149058.1\|938169_939648_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3
WP_004890796.1\|939644_940367_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004144192.1\|940685_942047_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004151134.1\|942289_943186_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_024264506.1\|943426_944200_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004180551.1\|944210_945074_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_5

1350096 : 1435654

Salmonella_phage(72.55%)

portal,capsid,integrase,lysis,tRNA,transposase,plate,coat,terminase,head,tail

attL 1394791:1394837|attR 1431357:1431403

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002914079.1\|1350096_1350834_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_002914082.1\|1350965_1352297_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
WP_002914084.1\|1352342_1352726_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
WP_002914088.1\|1353039_1353729_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
WP_002914089.1\|1353786_1354872_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_002914091.1\|1355075_1355501_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
WP_002914092.1\|1355570_1356269_+	DTW domain-containing protein	NA	NA	NA	NA
WP_004188841.1\|1356303_1358955_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914094.1\|1359075_1360431_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_002914095.1\|1360472_1360796_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914097.1\|1360799_1362098_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_004150973.1\|1368063_1370637_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914109.1\|1370766_1371498_-	polyphenol oxidase	NA	NA	NA	NA
WP_002914110.1\|1371494_1372475_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_004145664.1\|1372606_1373344_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002914111.1\|1373614_1373950_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100250063.1\|1374056_1374104_+	hypothetical protein	NA	NA	NA	NA
WP_004150975.1\|1374204_1375365_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_002914112.1\|1375361_1376234_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_002914113.1\|1376296_1377418_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914114.1\|1377427_1378498_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_004174804.1\|1378840_1379350_+	YfiR family protein	NA	NA	NA	NA
WP_002914116.1\|1379342_1380566_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_002914117.1\|1380579_1381062_+	OmpA family protein	NA	NA	NA	NA
WP_002914118.1\|1381070_1382441_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914119.1\|1382497_1382956_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_004220183.1\|1382945_1383083_+	hypothetical protein	NA	NA	NA	NA
WP_002914145.1\|1383075_1383423_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914147.1\|1383462_1384230_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_004150977.1\|1384261_1384810_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914149.1\|1384828_1385077_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002914152.1\|1385336_1386701_-	signal recognition particle protein	NA	NA	NA	NA
WP_002914153.1\|1386864_1387656_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_004149392.1\|1387675_1388962_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914155.1\|1389081_1389672_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_002914158.1\|1389796_1390675_+	NAD(+) kinase	NA	NA	NA	NA
WP_002914159.1\|1390761_1392423_+	DNA repair protein RecN	NA	NA	NA	NA
WP_004145681.1\|1392448_1392589_+	hypothetical protein	NA	NA	NA	NA
WP_002914160.1\|1392570_1392912_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914161.1\|1392978_1393269_-	RnfH family protein	NA	NA	NA	NA
WP_004188817.1\|1393258_1393735_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914164.1\|1393845_1394328_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1394791:1394837	attL	NA	NA	NA	NA
WP_004150980.1\|1394931_1395309_+	hypothetical protein	NA	NA	NA	NA
WP_004150981.1\|1395336_1395555_-	positive regulator of late gene transcription	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150982.1\|1395621_1396716_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150983.1\|1396712_1397198_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_072093161.1\|1397194_1399591_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.1e-107	44.5
WP_002896220.1\|1399817_1399937_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004150985.1\|1399951_1400251_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_004150986.1\|1400303_1400819_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150987.1\|1400828_1402001_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150988.1\|1402149_1403223_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004200602.1\|1403274_1404393_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150990.1\|1404402_1406352_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
WP_004152935.1\|1406353_1407025_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150992.1\|1407017_1407926_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004150993.1\|1407912_1408275_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150994.1\|1408271_1408844_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150995.1\|1408938_1409805_+	hypothetical protein	NA	NA	NA	NA
WP_004150996.1\|1409827_1410274_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150997.1\|1410266_1410689_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_072093160.1\|1410651_1410810_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	9.0e-15	75.0
WP_004150998.1\|1410784_1411213_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_004150999.1\|1411209_1411593_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004151000.1\|1411597_1412107_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004134639.1\|1412087_1412303_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151001.1\|1412306_1412510_-\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004151002.1\|1412509_1412974_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_004134644.1\|1413069_1413723_-\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
WP_004151003.1\|1413726_1414779_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004151004.1\|1414795_1415629_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_104022053.1\|1415769_1417533_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.6
WP_004151006.1\|1417532_1418576_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_024940854.1\|1418632_1418902_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151007.1\|1419423_1420425_+	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|1420424_1421504_+	hypothetical protein	NA	NA	NA	NA
WP_004151010.1\|1422268_1422502_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151011.1\|1422513_1422702_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_004151012.1\|1422864_1425249_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
WP_004151013.1\|1425245_1426097_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_004151014.1\|1426093_1426321_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151016.1\|1426320_1426554_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004144796.1\|1426621_1426960_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151017.1\|1426923_1427124_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004151018.1\|1427131_1427641_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_001397669.1\|1427673_1427916_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151019.1\|1428038_1428668_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_004151020.1\|1428670_1429696_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.5e-190	93.8
WP_004151021.1\|1429692_1431243_+	hypothetical protein	NA	NA	NA	NA
WP_004151022.1\|1431677_1432478_-	hypothetical protein	NA	NA	NA	NA
1431357:1431403	attR	NA	NA	NA	NA
WP_002914178.1\|1432602_1433487_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002914180.1\|1433698_1434271_+	flavin oxidoreductase	NA	NA	NA	NA
WP_002914181.1\|1434281_1434644_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004099053.1\|1434685_1435654_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	5.1e-185	98.8

DBSCAN-SWA_6

2152408 : 2201251

uncultured_Caudovirales_phage(68.75%)

portal,capsid,protease,tRNA,terminase,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002918465.1\|2152408_2152903_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
WP_002918467.1\|2152906_2153545_-	stringent starvation protein A	NA	NA	NA	NA
WP_135801240.1\|2153514_2153799_-	hypothetical protein	NA	NA	NA	NA
WP_000829818.1\|2153856_2154249_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002918559.1\|2154264_2154693_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_004144945.1\|2154958_2156086_-	cell division protein ZapE	NA	NA	NA	NA
WP_002918565.1\|2156276_2156675_+	DUF1043 family protein	NA	NA	NA	NA
WP_002918566.1\|2156848_2158216_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918568.1\|2158303_2159362_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_002918570.1\|2159498_2160437_-	malate dehydrogenase	NA	NA	NA	NA
WP_002918625.1\|2160851_2161322_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918626.1\|2161697_2161961_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918627.1\|2162059_2162326_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918629.1\|2162376_2162652_-	hypothetical protein	NA	NA	NA	NA
WP_002918632.1\|2162731_2164699_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918639.1\|2164704_2165637_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918640.1\|2165644_2165848_-	AaeX family protein	NA	NA	NA	NA
WP_002918641.1\|2165979_2166909_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_002918642.1\|2166944_2168390_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_004150952.1\|2168478_2172276_-	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_002918644.1\|2172313_2173783_-	ribonuclease G	NA	NA	NA	NA
WP_002918646.1\|2173785_2174367_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918648.1\|2174374_2174863_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004149974.1\|2174862_2175855_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918653.1\|2175925_2176969_-	rod shape-determining protein MreB	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_002918686.1\|2177274_2179215_-	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002918687.1\|2179294_2179486_-	hypothetical protein	NA	NA	NA	NA
WP_002918688.1\|2179714_2180716_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_002918689.1\|2180715_2181324_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_002918732.1\|2181547_2182000_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918736.1\|2182022_2182490_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002918738.1\|2182500_2183850_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918740.1\|2183960_2184203_+	YhdT family protein	NA	NA	NA	NA
WP_002918742.1\|2184192_2185644_+	sodium/pantothenate symporter	NA	NA	NA	NA
WP_002918745.1\|2185655_2186537_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_004144972.1\|2186894_2187860_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000462905.1\|2187884_2188181_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
WP_004150954.1\|2188334_2188526_-	hypothetical protein	NA	NA	NA	NA
WP_004150955.1\|2188528_2190190_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
WP_000113647.1\|2190173_2190530_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150957.1\|2190660_2190813_-	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	2.4e-17	88.0
WP_004150959.1\|2190805_2191249_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_001547824.1\|2191248_2191548_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150961.1\|2191544_2191880_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_004150962.1\|2191876_2193118_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_001547826.1\|2193119_2193680_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_001549743.1\|2193731_2194898_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_004150963.1\|2195161_2195674_+	hypothetical protein	NA	NA	NA	NA
WP_004150964.1\|2195722_2196058_-	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|2196400_2198536_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_001549749.1\|2198535_2198901_-	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|2198897_2199266_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_004218267.1\|2199364_2199493_+	hypothetical protein	NA	NA	NA	NA
WP_001549752.1\|2199569_2199758_-	hypothetical protein	NA	NA	NA	NA
WP_157263200.1\|2199750_2199969_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	1.4e-34	94.4
WP_004150969.1\|2200471_2201251_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5

DBSCAN-SWA_7

3294184 : 3300009

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152202.1\|3294184_3294751_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
WP_004152203.1\|3294768_3295014_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152204.1\|3295010_3295748_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
WP_000556592.1\|3296308_3296575_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.0e-30	71.6
WP_072093163.1\|3296577_3297120_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
WP_004152205.1\|3297116_3297344_+	hypothetical protein	NA	NA	NA	NA
WP_004152206.1\|3297340_3297661_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_004152207.1\|3297675_3300009_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9

DBSCAN-SWA_8

3769560 : 3781214

Enterobacteria_phage(70.0%)

integrase

attL 3757694:3757708|attR 3780751:3780765

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3757694:3757708	attL	NA	NA	NA	NA
WP_002889890.1\|3769560_3771894_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
WP_002889897.1\|3771905_3772226_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_004219964.1\|3772222_3772402_-	hypothetical protein	NA	NA	NA	NA
WP_072028197.1\|3772446_3772998_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889915.1\|3773000_3773267_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_004903606.1\|3773371_3773509_+	hypothetical protein	NA	NA	NA	NA
WP_002889917.1\|3773808_3774546_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
WP_002889919.1\|3774542_3774788_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_002889930.1\|3774805_3775372_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_020802988.1\|3775444_3775594_+	hypothetical protein	NA	NA	NA	NA
WP_004152979.1\|3775940_3776366_-	hypothetical protein	NA	NA	NA	NA
WP_004152029.1\|3776365_3777316_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_002889938.1\|3777303_3778494_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_002889940.1\|3778846_3780100_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_004144574.1\|3780110_3781214_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
3780751:3780765	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3951061 : 4010956

Escherichia_phage(37.5%)

protease,integrase,transposase,tRNA

attL 3948229:3948243|attR 3973089:3973103

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3948229:3948243	attL	NA	NA	NA	NA
WP_001067858.1\|3951061_3951766_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001199192.1\|3952310_3953087_-	aminoglycoside N-acetyltransferase AAC(3)-IV	NA	NA	NA	NA
WP_001067858.1\|3953200_3953905_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_104022071.1\|3954207_3954738_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_000602738.1\|3955159_3955912_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_004152391.1\|3957419_3959135_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004152392.1\|3959244_3962274_+\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004199214.1\|3962380_3963406_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|3963402_3964182_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_015062847.1\|3964568_3965450_+	carbapenem-hydrolyzing class A beta-lactamase KPC-4	A0A1B0VBP7	Salmonella_phage	1.1e-74	52.5
WP_004152397.1\|3965699_3967019_-\|transposase	IS1182-like element ISKpn6 family transposase	NA	NA	NA	NA
WP_158648848.1\|3967337_3967508_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_002892260.1\|3967954_3968632_-	iron ABC transporter ATP-binding protein FetA	G3M9Y6	Bacillus_virus	7.8e-23	33.5
WP_002892258.1\|3968772_3969690_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_004151325.1\|3969686_3970145_+	NfeD family protein	NA	NA	NA	NA
WP_002892208.1\|3970141_3970552_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_162493474.1\|3970604_3973160_+	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	1.6e-113	38.0
3973089:3973103	attR	NA	NA	NA	NA
WP_004151327.1\|3973291_3974086_+	hypothetical protein	NA	NA	NA	NA
WP_002892205.1\|3974288_3974768_+\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_002892203.1\|3974873_3976526_-	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA
WP_002892200.1\|3976821_3978042_+	MFS transporter	NA	NA	NA	NA
WP_002892197.1\|3978042_3978156_-	hypothetical protein	NA	NA	NA	NA
WP_004217162.1\|3978176_3978299_-	hypothetical protein	NA	NA	NA	NA
WP_002892195.1\|3978267_3979944_+	Kef family K(+) transporter	NA	NA	NA	NA
WP_002892192.1\|3979979_3981284_-	inosine/guanosine kinase	NA	NA	NA	NA
WP_002892189.1\|3981347_3982310_-	ferrochelatase	NA	NA	NA	NA
WP_002892184.1\|3982438_3983083_-	adenylate kinase	NA	NA	NA	NA
WP_002892181.1\|3983305_3985180_-	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	6.4e-115	36.8
WP_002892177.1\|3985291_3985897_-	recombination protein RecR	NA	NA	NA	NA
WP_002892173.1\|3985896_3986229_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_004151328.1\|3986286_3988194_-	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	2.3e-43	38.2
WP_002892145.1\|3988286_3988838_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	3.9e-28	44.5
WP_002892144.1\|3988988_3989366_-	DUF454 family protein	NA	NA	NA	NA
WP_002892142.1\|3989435_3989963_+	primosomal replication protein N''	NA	NA	NA	NA
WP_002892136.1\|3989975_3990149_+	pleiotropic regulatory protein RsmS	NA	NA	NA	NA
WP_002892131.1\|3990216_3991116_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.1e-63	51.2
WP_004151329.1\|3991151_3994499_-	mechanosensitive channel MscK	NA	NA	NA	NA
WP_002892080.1\|3994628_3995279_-	multidrug efflux transporter transcriptional repressor AcrR	NA	NA	NA	NA
WP_085955245.1\|3995368_3996560_+\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
WP_001067858.1\|3996676_3997381_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_002892263.1\|3998032_3998887_-	co-chaperone YbbN	NA	NA	NA	NA
WP_004221682.1\|3998945_3999755_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_004196998.1\|3999744_4000368_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_004151324.1\|4000338_4001025_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-31	35.7
WP_004147400.1\|4001021_4003436_+	ABC transporter permease	NA	NA	NA	NA
WP_004219504.1\|4003412_4003526_-	hypothetical protein	NA	NA	NA	NA
WP_004142997.1\|4003617_4004763_+	porin	NA	NA	NA	NA
WP_004151323.1\|4004870_4005947_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_004143002.1\|4006058_4007126_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_004151322.1\|4007122_4007632_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_004151321.1\|4007728_4008067_-	hypothetical protein	NA	NA	NA	NA
WP_004151320.1\|4008174_4008897_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_004151319.1\|4008900_4009395_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_004143010.1\|4009570_4010956_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

DBSCAN-SWA_10

4380179 : 4417515

Salmonella_phage(85.0%)

portal,capsid,integrase,lysis,plate,terminase,head,tail

attL 4380087:4380105|attR 4417587:4417605

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4380087:4380105	attL	NA	NA	NA	NA
WP_014342959.1\|4380179_4381160_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.4e-97	57.2
WP_004178082.1\|4381647_4383135_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004150866.1\|4383233_4384178_-	hypothetical protein	NA	NA	NA	NA
WP_004152885.1\|4384189_4385068_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
WP_000188448.1\|4385213_4385435_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|4385467_4385977_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000956179.1\|4385984_4386185_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000963473.1\|4386148_4386490_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_004150864.1\|4386557_4386791_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000752622.1\|4386790_4387018_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_004150863.1\|4387014_4387872_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
WP_004150862.1\|4387868_4390283_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_001154434.1\|4390436_4390625_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_001217575.1\|4390635_4390869_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_000700647.1\|4390983_4391661_+	hypothetical protein	NA	NA	NA	NA
WP_004199124.1\|4391936_4393679_+	AIPR family protein	NA	NA	NA	NA
WP_002895959.1\|4393740_4394766_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004150858.1\|4394765_4396532_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895967.1\|4396674_4397508_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_002895972.1\|4397524_4398583_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_000059191.1\|4398586_4399237_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002896151.1\|4399332_4399797_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_002896155.1\|4399796_4400000_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896158.1\|4400003_4400219_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896161.1\|4400199_4400709_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896163.1\|4400713_4401097_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896168.1\|4401093_4401522_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896170.1\|4401508_4401655_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	6.0e-13	76.1
WP_002896172.1\|4401617_4402049_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896175.1\|4402041_4402488_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_004199112.1\|4402484_4402994_-	hypothetical protein	NA	NA	NA	NA
WP_004226282.1\|4402992_4403157_+	hypothetical protein	NA	NA	NA	NA
WP_002896177.1\|4403271_4403844_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_002896179.1\|4403840_4404203_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
WP_002896182.1\|4404189_4405098_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_004150856.1\|4405090_4405690_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_004152882.1\|4405691_4408643_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
WP_002896186.1\|4408646_4409378_+	hypothetical protein	NA	NA	NA	NA
WP_004232615.1\|4409416_4409578_+	hypothetical protein	NA	NA	NA	NA
WP_002896191.1\|4409607_4410684_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896193.1\|4410822_4411995_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896201.1\|4412004_4412520_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896204.1\|4412572_4412872_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896220.1\|4412886_4413006_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_162493475.1\|4413232_4415626_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	3.8e-104	43.2
WP_002896224.1\|4415622_4416108_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896225.1\|4416104_4417205_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_000972391.1\|4417296_4417515_+	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
4417587:4417605	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4451931 : 4461395

Dickeya_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|4451931_4453047_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|4453043_4454984_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|4455060_4455282_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|4455607_4455925_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|4455955_4458235_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|4458355_4458574_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_004141853.1\|4458927_4459647_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004150847.1\|4459673_4461395_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_12

4884988 : 4928036

Klebsiella_phage(34.04%)

integrase,transposase

attL 4883069:4883083|attR 4892009:4892023

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4883069:4883083	attL	NA	NA	NA	NA
WP_004152144.1\|4884988_4885750_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
WP_004152145.1\|4885966_4887499_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_016197745.1\|4887697_4888246_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_004152147.1\|4888442_4889624_+\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_004152148.1\|4889604_4889847_-	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004198245.1\|4889806_4889953_-	hypothetical protein	A0A1B5FPC2	Escherichia_phage	2.9e-15	70.8
WP_014343018.1\|4890025_4890259_-	hypothetical protein	NA	NA	NA	NA
WP_004218013.1\|4890501_4890615_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	4.6e-13	100.0
WP_004152151.1\|4890710_4890935_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004154298.1\|4890924_4891635_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152153.1\|4891640_4892159_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
4892009:4892023	attR	NA	NA	NA	NA
WP_004152154.1\|4892263_4893091_-	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152155.1\|4893087_4893282_-	hypothetical protein	NA	NA	NA	NA
WP_004152156.1\|4893278_4893704_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004146412.1\|4893700_4893823_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	1.3e-16	100.0
WP_004152157.1\|4893890_4894145_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004218017.1\|4894137_4894299_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	1.5e-20	96.2
WP_004152159.1\|4894672_4894861_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152160.1\|4894853_4895168_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152161.1\|4895338_4896007_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152162.1\|4896104_4896326_+	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004198228.1\|4896902_4898561_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004218023.1\|4898547_4899525_+	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198239.1\|4899521_4899998_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004152167.1\|4899994_4900777_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004152168.1\|4900843_4900999_+	hypothetical protein	NA	NA	NA	NA
WP_004218026.1\|4901036_4901165_-	hypothetical protein	NA	NA	NA	NA
WP_004146526.1\|4901182_4901431_+	hypothetical protein	NA	NA	NA	NA
WP_004152169.1\|4901433_4901964_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004153952.1\|4901960_4902350_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152170.1\|4902584_4902905_+	hypothetical protein	NA	NA	NA	NA
WP_004218030.1\|4903270_4903759_+	hypothetical protein	NA	NA	NA	NA
WP_085955245.1\|4904247_4905439_+\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
WP_004152173.1\|4906653_4908105_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152174.1\|4908160_4908709_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004199270.1\|4908760_4909963_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_000528476.1\|4909966_4910461_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_001132269.1\|4910472_4911414_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
WP_000725700.1\|4911453_4911735_+	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|4911703_4912123_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000834982.1\|4912119_4912626_+	hypothetical protein	NA	NA	NA	NA
WP_001116156.1\|4912625_4913012_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_004152176.1\|4913106_4913547_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_004152177.1\|4913550_4914696_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004199809.1\|4914706_4915147_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
WP_004152564.1\|4915150_4915576_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004152565.1\|4915611_4915764_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152566.1\|4915753_4917757_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004225238.1\|4917942_4918356_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	8.1e-31	55.9
WP_004217362.1\|4918431_4918659_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	4.6e-20	56.0
WP_004152569.1\|4918661_4919684_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004152570.1\|4919683_4920025_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004173705.1\|4920077_4920263_-	hypothetical protein	NA	NA	NA	NA
WP_004225248.1\|4920515_4920866_+	hypothetical protein	NA	NA	NA	NA
WP_004152572.1\|4920919_4921573_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152573.1\|4921574_4921928_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152574.1\|4921927_4923124_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152575.1\|4923120_4923894_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004231600.1\|4924368_4924533_+	hypothetical protein	NA	NA	NA	NA
WP_004231602.1\|4924653_4924785_+	hypothetical protein	NA	NA	NA	NA
WP_004152577.1\|4924759_4924957_+	hypothetical protein	NA	NA	NA	NA
WP_014343022.1\|4925012_4928036_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	1.6e-22	44.7

DBSCAN-SWA_13

4979843 : 5043120

Escherichia_phage(16.36%)

tail,terminase,tRNA,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002902419.1\|4979843_4980587_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.5e-16	30.5
WP_004148192.1\|4980866_4981850_+	zinc transporter ZntB	NA	NA	NA	NA
WP_004151591.1\|4982375_4983749_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.6e-53	32.3
WP_004179591.1\|4983794_4984730_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.4e-139	94.1
WP_075995094.1\|4984778_4986017_-	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	1.0e-161	67.1
WP_004179593.1\|4986017_4986230_-	DUF1233 family excisionase	A0A0U2RY08	Escherichia_phage	8.4e-24	71.8
WP_023282473.1\|4986294_4986534_-	DUF4060 family protein	M9P0E0	Enterobacteria_phage	2.7e-31	83.3
WP_075995093.1\|4986574_4987663_-	recombinase RecT	H6WRX0	Salmonella_phage	2.8e-107	56.2
WP_075995092.1\|4987675_4990777_-	exodeoxyribonuclease	H6WRX1	Salmonella_phage	1.1e-278	59.1
WP_016160782.1\|4990914_4991070_-	hypothetical protein	H6WRX3	Salmonella_phage	5.7e-14	73.1
WP_004179600.1\|4991078_4991270_-	YebW family protein	NA	NA	NA	NA
WP_048230998.1\|4991698_4992055_-	hypothetical protein	NA	NA	NA	NA
WP_071526640.1\|4992151_4992415_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_040225552.1\|4992417_4992954_+	hypothetical protein	M9NZI6	Enterobacteria_phage	4.1e-59	67.8
WP_103857350.1\|4993358_4994216_+	hypothetical protein	K7PGZ0	Enterobacteria_phage	4.7e-89	63.7
WP_064145491.1\|4994212_4994926_+	Replication protein P	A0A0M3ULE2	Salmonella_phage	9.0e-70	58.4
WP_064190507.1\|4994918_4995287_+	DUF977 family protein	H6WRX9	Salmonella_phage	3.7e-11	43.0
WP_016946301.1\|4995283_4995487_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	1.3e-26	86.4
WP_075995091.1\|4995479_4995734_+	hypothetical protein	S5MQM0	Escherichia_phage	7.0e-09	50.7
WP_075995090.1\|4995730_4995967_+	hypothetical protein	S4TVX5	Salmonella_phage	7.4e-13	48.5
WP_064190503.1\|4996828_4997698_+	hypothetical protein	A0A0H4IU61	Shigella_phage	9.4e-13	42.0
WP_064173263.1\|4998174_4999182_+	DNA adenine methylase	NA	NA	NA	NA
WP_074189154.1\|4999183_5000203_-	hypothetical protein	NA	NA	NA	NA
WP_064173262.1\|5000206_5001319_-	ParB N-terminal domain-containing protein	Q7Y4B3	Escherichia_virus	3.0e-19	24.2
WP_065781843.1\|5001650_5001884_+	DinI-like family protein	K7PM44	Enterobacteria_phage	2.2e-25	68.8
WP_004184501.1\|5001962_5002184_+	hypothetical protein	NA	NA	NA	NA
WP_103857333.1\|5002241_5002841_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	8.6e-90	79.4
WP_020804598.1\|5003049_5003346_+	DUF1364 domain-containing protein	E5AGG0	Erwinia_phage	1.7e-35	74.5
WP_103857334.1\|5003342_5003699_+	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	4.4e-41	63.2
WP_023282413.1\|5003814_5004636_+	antitermination protein	K7PKS8	Enterobacteria_phage	4.0e-98	67.1
WP_142906623.1\|5005322_5005718_+	hypothetical protein	G8C7V8	Escherichia_phage	3.8e-46	73.8
WP_012967892.1\|5005704_5005986_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.8e-32	72.0
WP_063106142.1\|5005985_5006612_+	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	7.6e-89	76.3
WP_023304957.1\|5006817_5007000_-	hypothetical protein	NA	NA	NA	NA
WP_063106143.1\|5007085_5007367_+	hypothetical protein	G8C7W3	Escherichia_phage	6.7e-29	69.9
WP_131275234.1\|5007401_5007677_-	hypothetical protein	NA	NA	NA	NA
WP_103857336.1\|5007806_5008811_+\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.3e-37	45.0
WP_103857337.1\|5008788_5010096_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	4.0e-148	58.7
WP_103857338.1\|5010095_5011496_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	7.1e-127	53.3
WP_103857339.1\|5011479_5012592_+	hypothetical protein	I6PD76	Cronobacter_phage	7.4e-111	55.4
WP_103857340.1\|5012676_5013462_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	6.0e-67	63.9
WP_103857341.1\|5013472_5014426_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	3.2e-131	73.7
WP_158280597.1\|5014434_5014707_+	hypothetical protein	NA	NA	NA	NA
WP_088678773.1\|5014747_5015143_+	protein singed	A0A0S2SYB7	Pseudomonas_phage	1.6e-12	42.5
WP_103857342.1\|5015144_5015399_+	hypothetical protein	J9Q7U0	Salmonella_phage	1.8e-20	51.2
WP_040975900.1\|5015408_5015642_+	hypothetical protein	A0A1V0E8A3	Vibrio_phage	1.3e-09	49.2
WP_103857343.1\|5015628_5016012_+	glutamate 5-kinase	A0A0S2SYG4	Pseudomonas_phage	1.2e-20	45.2
WP_103857344.1\|5016013_5016565_+	hypothetical protein	G8C7Q1	Escherichia_phage	3.9e-28	39.3
WP_004190640.1\|5016561_5016954_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_103857345.1\|5016977_5018150_+	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	9.4e-24	27.0
WP_103857346.1\|5018203_5018686_+	hypothetical protein	NA	NA	NA	NA
WP_121496572.1\|5018823_5019021_+	hypothetical protein	NA	NA	NA	NA
WP_103857347.1\|5019109_5019451_+	zinc ribbon domain-containing protein	S4TR42	Salmonella_phage	2.6e-06	43.3
WP_103857348.1\|5019552_5022891_+\|tail	phage tail protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-94	35.5
WP_015958316.1\|5022974_5023310_+	hypothetical protein	NA	NA	NA	NA
WP_004190622.1\|5023623_5024088_+	hypothetical protein	A0A286S298	Klebsiella_phage	3.0e-58	68.4
WP_073557850.1\|5024268_5024751_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	4.5e-81	93.8
WP_103857349.1\|5024760_5025141_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.4e-69	96.0
WP_131275233.1\|5025137_5028197_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	90.8
WP_104022025.1\|5028274_5030803_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	2.3e-35	59.9
WP_103857365.1\|5030812_5031088_+	hypothetical protein	NA	NA	NA	NA
WP_104022024.1\|5031178_5031937_-	hypothetical protein	NA	NA	NA	NA
WP_104022023.1\|5031939_5033691_-	GDSL family lipase	A0A286S1P0	Klebsiella_phage	1.7e-24	54.1
WP_042920289.1\|5033781_5034360_+	recombinase family protein	A0A286S1P7	Klebsiella_phage	6.1e-93	97.3
WP_040206344.1\|5034410_5034833_+	hypothetical protein	K7P834	Enterobacteria_phage	1.8e-25	44.5
WP_023332914.1\|5035838_5037326_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.1e-29	34.1
WP_004179627.1\|5037404_5037824_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	58.3
WP_075995087.1\|5037825_5039091_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	3.5e-210	83.8
WP_075995086.1\|5039150_5039765_+	hypothetical protein	NA	NA	NA	NA
WP_075995085.1\|5039788_5040460_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	9.0e-80	60.4
WP_004140161.1\|5041093_5041528_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	3.2e-30	50.7
WP_002902432.1\|5041609_5041822_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_002902433.1\|5041965_5043120_-	porin OmpK37	Q1MVN1	Enterobacteria_phage	4.8e-113	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP018674

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

16954 : 55114

Stx2-converting_phage(20.0%)

transposase,integrase

attL 23102:23118|attR 43190:43206

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015632444.1\|16954_18544_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.9e-189	66.1
WP_032414478.1\|18573_18924_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	3.1e-39	64.7
WP_015632445.1\|18920_19328_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	1.4e-14	40.2
WP_086581494.1\|19403_19544_+	hypothetical protein	NA	NA	NA	NA
WP_087893729.1\|19574_20847_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-146	81.7
WP_016162080.1\|21008_21260_+	hypothetical protein	NA	NA	NA	NA
WP_015632446.1\|21300_23229_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
23102:23118	attL	NA	NA	NA	NA
WP_016162079.1\|23231_23543_-	hypothetical protein	NA	NA	NA	NA
WP_015632448.1\|23938_24271_+	hypothetical protein	NA	NA	NA	NA
WP_015632449.1\|24541_24862_-	hypothetical protein	NA	NA	NA	NA
WP_016162076.1\|24915_25149_-	hypothetical protein	NA	NA	NA	NA
WP_015632450.1\|25840_26278_-	antirestriction protein	NA	NA	NA	NA
WP_015632451.1\|26447_27308_-	DUF4942 domain-containing protein	I6RTT5	Marinomonas_phage	2.8e-17	29.6
WP_032441934.1\|27381_27561_-	hypothetical protein	NA	NA	NA	NA
WP_016162075.1\|27704_28064_-	hypothetical protein	NA	NA	NA	NA
WP_015632453.1\|28657_29095_-	hypothetical protein	NA	NA	NA	NA
WP_015632454.1\|29222_29711_-	transcriptional regulator	NA	NA	NA	NA
WP_015632455.1\|29707_30166_-	hypothetical protein	NA	NA	NA	NA
WP_015632456.1\|30318_30747_-	partitioning protein	NA	NA	NA	NA
WP_015632457.1\|30739_31720_-	partitioning protein	A0A0A7NPX4	Enterobacteria_phage	2.3e-76	49.4
WP_015632458.1\|32080_32263_+	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	2.0e-05	48.3
WP_015632459.1\|32288_32732_+	hypothetical protein	A0A0R6PJ17	Moraxella_phage	4.6e-16	33.8
WP_016162072.1\|33073_33301_-	hypothetical protein	NA	NA	NA	NA
WP_016162071.1\|33730_33988_+	helix-turn-helix transcriptional regulator	H2DE32	Erwinia_phage	5.1e-07	56.4
WP_015632462.1\|34191_34758_-	hypothetical protein	NA	NA	NA	NA
WP_015632463.1\|34799_35144_-	hypothetical protein	NA	NA	NA	NA
WP_015632464.1\|35288_35594_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_015632465.1\|35593_35812_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_015632467.1\|36592_37024_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	7.2e-30	53.7
WP_016162068.1\|37023_38295_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	2.6e-152	63.0
WP_004098982.1\|38706_39582_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	5.6e-82	56.4
WP_006788217.1\|40951_41131_+	hypothetical protein	NA	NA	NA	NA
WP_015632375.1\|41562_42357_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.5e-52	88.7
WP_024191724.1\|43622_43934_-	hypothetical protein	NA	NA	NA	NA
43190:43206	attR	NA	NA	NA	NA
WP_040214038.1\|43967_44297_-	hypothetical protein	NA	NA	NA	NA
WP_103857363.1\|44455_44791_-	hypothetical protein	NA	NA	NA	NA
WP_064174377.1\|44856_47976_-	hypothetical protein	NA	NA	NA	NA
WP_060415434.1\|48291_48528_+	hypothetical protein	NA	NA	NA	NA
WP_060415435.1\|48524_49100_+	hypothetical protein	NA	NA	NA	NA
WP_016162063.1\|49641_50346_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.0e-139	99.6
WP_001067855.1\|51498_52203_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001326844.1\|52435_52597_+	hypothetical protein	NA	NA	NA	NA
WP_000176305.1\|52593_53205_-	DUF2913 family protein	NA	NA	NA	NA
WP_001568067.1\|53258_53540_-	hypothetical protein	NA	NA	NA	NA
WP_000227969.1\|54037_55114_-\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018675

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018676

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP018674

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection