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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018730 Xanthomonas hortorum pv. gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP018728 Xanthomonas hortorum pv. gardneri strain JS749-3 chromosome, complete genome 7 crisprs DinG,DEDDh,csa3,WYL,cas3 16 6 6 0
NZ_CP018729 Xanthomonas hortorum pv. gardneri strain JS749-3 plasmid pJS749-3.1, complete sequence 0 crisprs DinG,PD-DExK 0 0 0 0

Results visualization

1. NZ_CP018728
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018728_1 1346273-1346407 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018728_2 1363003-1363085 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018728_4 1635633-1635706 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018728_3 1635411-1635551 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018728_5 3098082-3098228 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018728_6 5037503-5038251 Orphan NA
15 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018728_7 5039800-5040644 Orphan NA
17 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP018728_5 5.1|3098131|49|NZ_CP018728|CRISPRCasFinder 3098131-3098179 49 NZ_CP018728.1 3271334-3271382 0 1.0
NZ_CP018728_5 5.1|3098131|49|NZ_CP018728|CRISPRCasFinder 3098131-3098179 49 NZ_CP018728.1 3271432-3271480 0 1.0
NZ_CP018728_5 5.1|3098131|49|NZ_CP018728|CRISPRCasFinder 3098131-3098179 49 NZ_CP018728.1 3271530-3271578 0 1.0
NZ_CP018728_7 7.6|5040069|19|NZ_CP018728|CRT 5040069-5040087 19 NZ_CP018728.1 5038773-5038791 0 1.0
NZ_CP018728_7 7.6|5040069|19|NZ_CP018728|CRT 5040069-5040087 19 NZ_CP018728.1 5038917-5038935 0 1.0
NZ_CP018728_6 6.3|5037628|19|NZ_CP018728|CRT 5037628-5037646 19 NZ_CP018728.1 4485255-4485273 1 0.947
NZ_CP018728_7 7.1|5039829|19|NZ_CP018728|CRT 5039829-5039847 19 NZ_CP018728.1 5039685-5039703 1 0.947
NZ_CP018728_7 7.2|5039877|19|NZ_CP018728|CRT 5039877-5039895 19 NZ_CP018728.1 5039733-5039751 1 0.947
NZ_CP018728_7 7.7|5040117|19|NZ_CP018728|CRT 5040117-5040135 19 NZ_CP018728.1 178700-178718 1 0.947
NZ_CP018728_7 7.7|5040117|19|NZ_CP018728|CRT 5040117-5040135 19 NZ_CP018728.1 1919909-1919927 1 0.947
NZ_CP018728_7 7.14|5040453|19|NZ_CP018728|CRT 5040453-5040471 19 NZ_CP018728.1 5038725-5038743 1 0.947
NZ_CP018728_7 7.14|5040453|19|NZ_CP018728|CRT 5040453-5040471 19 NZ_CP018728.1 5038869-5038887 1 0.947
NZ_CP018728_7 7.14|5040453|19|NZ_CP018728|CRT 5040453-5040471 19 NZ_CP018728.1 5039445-5039463 1 0.947
NZ_CP018728_6 6.4|5037676|19|NZ_CP018728|CRT 5037676-5037694 19 NZ_CP018728.1 2943387-2943405 2 0.895
NZ_CP018728_7 7.1|5039829|19|NZ_CP018728|CRT 5039829-5039847 19 NZ_CP018728.1 1662908-1662926 2 0.895
NZ_CP018728_7 7.1|5039829|19|NZ_CP018728|CRT 5039829-5039847 19 NZ_CP018728.1 2425355-2425373 2 0.895
NZ_CP018728_7 7.1|5039829|19|NZ_CP018728|CRT 5039829-5039847 19 NZ_CP018728.1 5038965-5038983 2 0.895
NZ_CP018728_7 7.1|5039829|19|NZ_CP018728|CRT 5039829-5039847 19 NZ_CP018728.1 5039253-5039271 2 0.895
NZ_CP018728_7 7.4|5039973|19|NZ_CP018728|CRT 5039973-5039991 19 NZ_CP018728.1 3396316-3396334 2 0.895
NZ_CP018728_7 7.5|5040021|19|NZ_CP018728|CRT 5040021-5040039 19 NZ_CP018728.1 2333951-2333969 2 0.895
NZ_CP018728_7 7.5|5040021|19|NZ_CP018728|CRT 5040021-5040039 19 NZ_CP018728.1 5039013-5039031 2 0.895
NZ_CP018728_7 7.6|5040069|19|NZ_CP018728|CRT 5040069-5040087 19 NZ_CP018728.1 893467-893485 2 0.895
NZ_CP018728_7 7.6|5040069|19|NZ_CP018728|CRT 5040069-5040087 19 NZ_CP018728.1 1490422-1490440 2 0.895
NZ_CP018728_7 7.6|5040069|19|NZ_CP018728|CRT 5040069-5040087 19 NZ_CP018728.1 1514799-1514817 2 0.895
NZ_CP018728_7 7.6|5040069|19|NZ_CP018728|CRT 5040069-5040087 19 NZ_CP018728.1 3840079-3840097 2 0.895
NZ_CP018728_7 7.6|5040069|19|NZ_CP018728|CRT 5040069-5040087 19 NZ_CP018728.1 5084142-5084160 2 0.895
NZ_CP018728_7 7.7|5040117|19|NZ_CP018728|CRT 5040117-5040135 19 NZ_CP018728.1 4142765-4142783 2 0.895
NZ_CP018728_7 7.7|5040117|19|NZ_CP018728|CRT 5040117-5040135 19 NZ_CP018728.1 1755970-1755988 2 0.895
NZ_CP018728_7 7.7|5040117|19|NZ_CP018728|CRT 5040117-5040135 19 NZ_CP018728.1 4777081-4777099 2 0.895
NZ_CP018728_7 7.7|5040117|19|NZ_CP018728|CRT 5040117-5040135 19 NZ_CP018728.1 5039685-5039703 2 0.895
NZ_CP018728_7 7.8|5040165|19|NZ_CP018728|CRT 5040165-5040183 19 NZ_CP018728.1 3172805-3172823 2 0.895
NZ_CP018728_7 7.9|5040213|19|NZ_CP018728|CRT 5040213-5040231 19 NZ_CP018728.1 3111031-3111049 2 0.895
NZ_CP018728_7 7.11|5040309|19|NZ_CP018728|CRT 5040309-5040327 19 NZ_CP018728.1 5039157-5039175 2 0.895
NZ_CP018728_7 7.11|5040309|19|NZ_CP018728|CRT 5040309-5040327 19 NZ_CP018728.1 5039445-5039463 2 0.895
NZ_CP018728_7 7.13|5040405|19|NZ_CP018728|CRT 5040405-5040423 19 NZ_CP018728.1 4306286-4306304 2 0.895
NZ_CP018728_7 7.14|5040453|19|NZ_CP018728|CRT 5040453-5040471 19 NZ_CP018728.1 1756198-1756216 2 0.895
NZ_CP018728_7 7.14|5040453|19|NZ_CP018728|CRT 5040453-5040471 19 NZ_CP018728.1 5039157-5039175 2 0.895
NZ_CP018728_7 7.15|5040501|19|NZ_CP018728|CRT 5040501-5040519 19 NZ_CP018728.1 5038773-5038791 2 0.895
NZ_CP018728_7 7.15|5040501|19|NZ_CP018728|CRT 5040501-5040519 19 NZ_CP018728.1 5038917-5038935 2 0.895
NZ_CP018728_7 7.16|5040549|19|NZ_CP018728|CRT 5040549-5040567 19 NZ_CP018728.1 1669384-1669402 2 0.895
NZ_CP018728_7 7.16|5040549|19|NZ_CP018728|CRT 5040549-5040567 19 NZ_CP018728.1 4167643-4167661 2 0.895

1. spacer 5.1|3098131|49|NZ_CP018728|CRISPRCasFinder matches to position: 3271334-3271382, mismatch: 0, identity: 1.0

gtccctgcactctcttttgaacggctaaaagtggctcactctgtggctt	CRISPR spacer
gtccctgcactctcttttgaacggctaaaagtggctcactctgtggctt	Protospacer
*************************************************

2. spacer 5.1|3098131|49|NZ_CP018728|CRISPRCasFinder matches to position: 3271432-3271480, mismatch: 0, identity: 1.0

gtccctgcactctcttttgaacggctaaaagtggctcactctgtggctt	CRISPR spacer
gtccctgcactctcttttgaacggctaaaagtggctcactctgtggctt	Protospacer
*************************************************

3. spacer 5.1|3098131|49|NZ_CP018728|CRISPRCasFinder matches to position: 3271530-3271578, mismatch: 0, identity: 1.0

gtccctgcactctcttttgaacggctaaaagtggctcactctgtggctt	CRISPR spacer
gtccctgcactctcttttgaacggctaaaagtggctcactctgtggctt	Protospacer
*************************************************

4. spacer 7.6|5040069|19|NZ_CP018728|CRT matches to position: 5038773-5038791, mismatch: 0, identity: 1.0

cgtgctgtcggcaccggcg	CRISPR spacer
cgtgctgtcggcaccggcg	Protospacer
*******************

5. spacer 7.6|5040069|19|NZ_CP018728|CRT matches to position: 5038917-5038935, mismatch: 0, identity: 1.0

cgtgctgtcggcaccggcg	CRISPR spacer
cgtgctgtcggcaccggcg	Protospacer
*******************

6. spacer 6.3|5037628|19|NZ_CP018728|CRT matches to position: 4485255-4485273, mismatch: 1, identity: 0.947

ttgtccagcgccatcaggg	CRISPR spacer
ttgtccagcgccatcacgg	Protospacer
**************** **

7. spacer 7.1|5039829|19|NZ_CP018728|CRT matches to position: 5039685-5039703, mismatch: 1, identity: 0.947

gtcgctgccgctgcgcgcg	CRISPR spacer
gtcgctgccgctgcgtgcg	Protospacer
***************.***

8. spacer 7.2|5039877|19|NZ_CP018728|CRT matches to position: 5039733-5039751, mismatch: 1, identity: 0.947

cgaactatcgccaccagag	CRISPR spacer
cgaactgtcgccaccagag	Protospacer
******.************

9. spacer 7.7|5040117|19|NZ_CP018728|CRT matches to position: 178700-178718, mismatch: 1, identity: 0.947

gtcgctgccggtgcgggcg	CRISPR spacer
gtcgctgccggcgcgggcg	Protospacer
***********.*******

10. spacer 7.7|5040117|19|NZ_CP018728|CRT matches to position: 1919909-1919927, mismatch: 1, identity: 0.947

gtcgctgccggtgcgggcg	CRISPR spacer
gtcgctgccggtgccggcg	Protospacer
************** ****

11. spacer 7.14|5040453|19|NZ_CP018728|CRT matches to position: 5038725-5038743, mismatch: 1, identity: 0.947

cgagctgtcgccgccggag	CRISPR spacer
cgagctgtcgcccccggag	Protospacer
************ ******

12. spacer 7.14|5040453|19|NZ_CP018728|CRT matches to position: 5038869-5038887, mismatch: 1, identity: 0.947

cgagctgtcgccgccggag	CRISPR spacer
cgagctgtcgcccccggag	Protospacer
************ ******

13. spacer 7.14|5040453|19|NZ_CP018728|CRT matches to position: 5039445-5039463, mismatch: 1, identity: 0.947

cgagctgtcgccgccggag	CRISPR spacer
cgagctttcgccgccggag	Protospacer
****** ************

14. spacer 6.4|5037676|19|NZ_CP018728|CRT matches to position: 2943387-2943405, mismatch: 2, identity: 0.895

tcgccaccggcggtctggc	CRISPR spacer
tcggcaccggaggtctggc	Protospacer
*** ****** ********

15. spacer 7.1|5039829|19|NZ_CP018728|CRT matches to position: 1662908-1662926, mismatch: 2, identity: 0.895

gtcgctgccgctgcgcgcg	CRISPR spacer
gtcgctgtcgctgtgcgcg	Protospacer
*******.*****.*****

16. spacer 7.1|5039829|19|NZ_CP018728|CRT matches to position: 2425355-2425373, mismatch: 2, identity: 0.895

gtcgctgccgctgcgcgcg	CRISPR spacer
gtcgctgccgatccgcgcg	Protospacer
********** * ******

17. spacer 7.1|5039829|19|NZ_CP018728|CRT matches to position: 5038965-5038983, mismatch: 2, identity: 0.895

gtcgctgccgctgcgcgcg	CRISPR spacer
gtcgctgcctttgcgcgcg	Protospacer
********* .********

18. spacer 7.1|5039829|19|NZ_CP018728|CRT matches to position: 5039253-5039271, mismatch: 2, identity: 0.895

gtcgctgccgctgcgcgcg	CRISPR spacer
gtcgctgcctttgcgcgcg	Protospacer
********* .********

19. spacer 7.4|5039973|19|NZ_CP018728|CRT matches to position: 3396316-3396334, mismatch: 2, identity: 0.895

atcgctgcctttgcgtgcg	CRISPR spacer
atcgctgcccatgcgtgcg	Protospacer
*********. ********

20. spacer 7.5|5040021|19|NZ_CP018728|CRT matches to position: 2333951-2333969, mismatch: 2, identity: 0.895

cgaactgtccccgcccgag	CRISPR spacer
cgaactgtcctcgcgcgag	Protospacer
**********.*** ****

21. spacer 7.5|5040021|19|NZ_CP018728|CRT matches to position: 5039013-5039031, mismatch: 2, identity: 0.895

cgaactgtccccgcccgag	CRISPR spacer
cgaactttccccgccggag	Protospacer
****** ******** ***

22. spacer 7.6|5040069|19|NZ_CP018728|CRT matches to position: 893467-893485, mismatch: 2, identity: 0.895

cgtgctgtcggcaccggcg	CRISPR spacer
cgtgctgccggcacccgcg	Protospacer
*******.******* ***

23. spacer 7.6|5040069|19|NZ_CP018728|CRT matches to position: 1490422-1490440, mismatch: 2, identity: 0.895

cgtgctgtcggcaccggcg	CRISPR spacer
cgtgccttcggcaccggcg	Protospacer
*****. ************

24. spacer 7.6|5040069|19|NZ_CP018728|CRT matches to position: 1514799-1514817, mismatch: 2, identity: 0.895

cgtgctgtcggcaccggcg	CRISPR spacer
cgtgcttccggcaccggcg	Protospacer
****** .***********

25. spacer 7.6|5040069|19|NZ_CP018728|CRT matches to position: 3840079-3840097, mismatch: 2, identity: 0.895

cgtgctgtcggcaccggcg	CRISPR spacer
cgtgctgtcggcgctggcg	Protospacer
************.*.****

26. spacer 7.6|5040069|19|NZ_CP018728|CRT matches to position: 5084142-5084160, mismatch: 2, identity: 0.895

cgtgctgtcggcaccggcg	CRISPR spacer
cgtgctgccggcaacggcg	Protospacer
*******.***** *****

27. spacer 7.7|5040117|19|NZ_CP018728|CRT matches to position: 4142765-4142783, mismatch: 2, identity: 0.895

gtcgctgccggtgcgggcg	CRISPR spacer
gtcgcggccggtgccggcg	Protospacer
***** ******** ****

28. spacer 7.7|5040117|19|NZ_CP018728|CRT matches to position: 1755970-1755988, mismatch: 2, identity: 0.895

gtcgctgccggtgcgggcg	CRISPR spacer
gtcgccgccggtgccggcg	Protospacer
*****.******** ****

29. spacer 7.7|5040117|19|NZ_CP018728|CRT matches to position: 4777081-4777099, mismatch: 2, identity: 0.895

gtcgctgccggtgcgggcg	CRISPR spacer
gtcggtgccggtgcaggcg	Protospacer
**** *********.****

30. spacer 7.7|5040117|19|NZ_CP018728|CRT matches to position: 5039685-5039703, mismatch: 2, identity: 0.895

gtcgctgccggtgcgggcg	CRISPR spacer
gtcgctgccgctgcgtgcg	Protospacer
********** **** ***

31. spacer 7.8|5040165|19|NZ_CP018728|CRT matches to position: 3172805-3172823, mismatch: 2, identity: 0.895

cgagctgtcgttgcccgat	CRISPR spacer
cgatctgtcgttgctcgat	Protospacer
*** **********.****

32. spacer 7.9|5040213|19|NZ_CP018728|CRT matches to position: 3111031-3111049, mismatch: 2, identity: 0.895

tgagctatcggcaccggcg	CRISPR spacer
tgcgcaatcggcaccggcg	Protospacer
** ** *************

33. spacer 7.11|5040309|19|NZ_CP018728|CRT matches to position: 5039157-5039175, mismatch: 2, identity: 0.895

cgagctttctccgcccgag	CRISPR spacer
cgagctttccccgccggag	Protospacer
*********.***** ***

34. spacer 7.11|5040309|19|NZ_CP018728|CRT matches to position: 5039445-5039463, mismatch: 2, identity: 0.895

cgagctttctccgcccgag	CRISPR spacer
cgagctttcgccgccggag	Protospacer
********* ***** ***

35. spacer 7.13|5040405|19|NZ_CP018728|CRT matches to position: 4306286-4306304, mismatch: 2, identity: 0.895

gtcgctgccgttctgtgcg	CRISPR spacer
gtcgctggcgttctgggcg	Protospacer
******* ******* ***

36. spacer 7.14|5040453|19|NZ_CP018728|CRT matches to position: 1756198-1756216, mismatch: 2, identity: 0.895

cgagctgtcgccgccggag	CRISPR spacer
cgagctgtcgcagctggag	Protospacer
*********** **.****

37. spacer 7.14|5040453|19|NZ_CP018728|CRT matches to position: 5039157-5039175, mismatch: 2, identity: 0.895

cgagctgtcgccgccggag	CRISPR spacer
cgagctttccccgccggag	Protospacer
****** ** *********

38. spacer 7.15|5040501|19|NZ_CP018728|CRT matches to position: 5038773-5038791, mismatch: 2, identity: 0.895

cgagctgtctgcaccggcg	CRISPR spacer
cgtgctgtcggcaccggcg	Protospacer
** ****** *********

39. spacer 7.15|5040501|19|NZ_CP018728|CRT matches to position: 5038917-5038935, mismatch: 2, identity: 0.895

cgagctgtctgcaccggcg	CRISPR spacer
cgtgctgtcggcaccggcg	Protospacer
** ****** *********

40. spacer 7.16|5040549|19|NZ_CP018728|CRT matches to position: 1669384-1669402, mismatch: 2, identity: 0.895

ctcgctgccctggcgcgcg	CRISPR spacer
ctggctgccatggcgcgcg	Protospacer
** ****** *********

41. spacer 7.16|5040549|19|NZ_CP018728|CRT matches to position: 4167643-4167661, mismatch: 2, identity: 0.895

ctcgctgccctggcgcgcg	CRISPR spacer
ctcgccggcctggcgcgcg	Protospacer
*****.* ***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP018728_7 7.1|5039829|19|NZ_CP018728|CRT 5039829-5039847 19 NZ_CP030772 Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence 231726-231744 0 1.0
NZ_CP018728_7 7.6|5040069|19|NZ_CP018728|CRT 5040069-5040087 19 NZ_CP014514 Frondihabitans sp. PAMC 28766 strain SR6 plasmid 1, complete sequence 121195-121213 0 1.0
NZ_CP018728_7 7.7|5040117|19|NZ_CP018728|CRT 5040117-5040135 19 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 834332-834350 0 1.0
NZ_CP018728_2 2.1|1363032|25|NZ_CP018728|CRISPRCasFinder 1363032-1363056 25 MH067971 Arthrobacter sp. strain ANT_H40 plasmid pA40H2, complete sequence 48130-48154 3 0.88
NZ_CP018728_4 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder 1635656-1635683 28 NZ_HG938356 Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence 118051-118078 5 0.821
NZ_CP018728_3 3.1|1635434|28|NZ_CP018728|CRISPRCasFinder 1635434-1635461 28 MH536819 Gordonia phage Fury, complete genome 3432-3459 6 0.786
NZ_CP018728_3 3.1|1635434|28|NZ_CP018728|CRISPRCasFinder 1635434-1635461 28 MH576960 Gordonia phage Pleakley, complete genome 3432-3459 6 0.786
NZ_CP018728_4 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder 1635656-1635683 28 NZ_CP016083 Streptomyces sp. SAT1 plasmid unnamed3, complete sequence 646239-646266 6 0.786
NZ_CP018728_4 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder 1635656-1635683 28 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 883181-883208 6 0.786
NZ_CP018728_4 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder 1635656-1635683 28 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 164043-164070 6 0.786
NZ_CP018728_3 3.1|1635434|28|NZ_CP018728|CRISPRCasFinder 1635434-1635461 28 NC_017805 Deinococcus gobiensis I-0 plasmid P1, complete sequence 410324-410351 7 0.75
NZ_CP018728_4 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder 1635656-1635683 28 NC_017958 Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence 767198-767225 7 0.75
NZ_CP018728_3 3.1|1635434|28|NZ_CP018728|CRISPRCasFinder 1635434-1635461 28 MH622939 Siphoviridae sp. isolate ctbf_3, complete genome 24863-24890 8 0.714

1. spacer 7.1|5039829|19|NZ_CP018728|CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 0, identity: 1.0

gtcgctgccgctgcgcgcg	CRISPR spacer
gtcgctgccgctgcgcgcg	Protospacer
*******************

2. spacer 7.6|5040069|19|NZ_CP018728|CRT matches to NZ_CP014514 (Frondihabitans sp. PAMC 28766 strain SR6 plasmid 1, complete sequence) position: , mismatch: 0, identity: 1.0

cgtgctgtcggcaccggcg	CRISPR spacer
cgtgctgtcggcaccggcg	Protospacer
*******************

3. spacer 7.7|5040117|19|NZ_CP018728|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 0, identity: 1.0

gtcgctgccggtgcgggcg	CRISPR spacer
gtcgctgccggtgcgggcg	Protospacer
*******************

4. spacer 2.1|1363032|25|NZ_CP018728|CRISPRCasFinder matches to MH067971 (Arthrobacter sp. strain ANT_H40 plasmid pA40H2, complete sequence) position: , mismatch: 3, identity: 0.88

caggcttctgacgcgaccctccggt	CRISPR spacer
caggtttctgacgcgtccctccggg	Protospacer
****.********** ******** 

5. spacer 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 5, identity: 0.821

tggaatggcccgcgcggcctgatcacca	CRISPR spacer
tgggtaagcccgcgcggcccgatcacca	Protospacer
***.  .************.********

6. spacer 3.1|1635434|28|NZ_CP018728|CRISPRCasFinder matches to MH536819 (Gordonia phage Fury, complete genome) position: , mismatch: 6, identity: 0.786

gccaacttcgacggtggcctgatcagcg	CRISPR spacer
ttcgatgccgacggtggcctgatcagcg	Protospacer
 .*.*. .********************

7. spacer 3.1|1635434|28|NZ_CP018728|CRISPRCasFinder matches to MH576960 (Gordonia phage Pleakley, complete genome) position: , mismatch: 6, identity: 0.786

gccaacttcgacggtggcctgatcagcg	CRISPR spacer
ttcgatgccgacggtggcctgatcagcg	Protospacer
 .*.*. .********************

8. spacer 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.786

tggaatggcccgcgcggcctgatcacca	CRISPR spacer
ccgagccgcccgcgcggccggatcacca	Protospacer
. **.. ************ ********

9. spacer 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 6, identity: 0.786

tggaatggcccgcgcggcctgatcacca	CRISPR spacer
cagactggccagcgcggcctgatcagcg	Protospacer
..** ***** ************** *.

10. spacer 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 6, identity: 0.786

tggaatggcccgcgcggcctgatcacca	CRISPR spacer
cagactggccagcgcggcctgatcagcg	Protospacer
..** ***** ************** *.

11. spacer 3.1|1635434|28|NZ_CP018728|CRISPRCasFinder matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 7, identity: 0.75

gccaacttcgacggtggcctgatcagcg	CRISPR spacer
atcaacatcgacggcggcctgatcatgt	Protospacer
..**** *******.**********   

12. spacer 4.1|1635656|28|NZ_CP018728|CRISPRCasFinder matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.75

tggaatggcccgcgcggcctgatcacca	CRISPR spacer
atcaccggcccgcgcggtctgatcaccg	Protospacer
   * .***********.*********.

13. spacer 3.1|1635434|28|NZ_CP018728|CRISPRCasFinder matches to MH622939 (Siphoviridae sp. isolate ctbf_3, complete genome) position: , mismatch: 8, identity: 0.714

gccaacttcgacggtggcctgatcagcg	CRISPR spacer
gccaacttcgagggtggcctgggtcaga	Protospacer
*********** *********. . . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1215148 : 1256983 31 Ralstonia_phage(33.33%) integrase,tRNA,transposase attL 1221085:1221099|attR 1236178:1236192
DBSCAN-SWA_2 1456966 : 1466808 10 Escherichia_phage(28.57%) NA NA
DBSCAN-SWA_3 1829150 : 1878205 40 Bacillus_phage(27.27%) integrase,protease,holin,transposase attL 1819239:1819256|attR 1886018:1886035
DBSCAN-SWA_4 3128807 : 3134781 10 Xanthomonas_phage(50.0%) NA NA
DBSCAN-SWA_5 3696740 : 3810020 97 Stenotrophomonas_phage(48.48%) terminase,capsid,tail,head,transposase,portal,tRNA,holin,plate NA
DBSCAN-SWA_6 3847612 : 3912693 50 Ralstonia_phage(16.67%) tRNA,protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage