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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018463 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP018466 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP018465 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.4, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP018464 Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence 0 crisprs csa3 0 0 2 0
NZ_CP018467 Xanthomonas euvesicatoria strain LMG930 chromosome, complete genome 3 crisprs DinG,csa3,WYL,cas3,DEDDh 0 1 6 0

Results visualization

1. NZ_CP018464
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 44400 : 51349 9 uncultured_Caudovirales_phage(66.67%) NA NA
DBSCAN-SWA_2 94965 : 129450 23 Salmonella_phage(20.0%) integrase,transposase attL 91823:91839|attR 128175:128191
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP018467
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018467_1 1796482-1796553 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018467_2 2125186-2125256 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018467_3 2942440-2942535 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP018467_2 2.1|2125209|25|NZ_CP018467|CRISPRCasFinder 2125209-2125233 25 NC_014842 Pantoea sp. At-9b plasmid pPAT9B05, complete sequence 45680-45704 5 0.8

1. spacer 2.1|2125209|25|NZ_CP018467|CRISPRCasFinder matches to NC_014842 (Pantoea sp. At-9b plasmid pPAT9B05, complete sequence) position: , mismatch: 5, identity: 0.8

ctctttacctgaaaccacggtaatt	CRISPR spacer
ttctttatctgaaaccacggtacgc	Protospacer
.******.**************  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 382048 : 390093 7 Escherichia_phage(28.57%) NA NA
DBSCAN-SWA_2 769241 : 807381 24 Leptospira_phage(100.0%) transposase NA
DBSCAN-SWA_3 1865661 : 1973000 98 Xanthomonas_phage(33.33%) transposase,coat,integrase attL 1856757:1856772|attR 1960491:1960508
DBSCAN-SWA_4 2448819 : 2507137 34 Leptospira_phage(54.55%) integrase,tRNA,protease,transposase attL 2457877:2457936|attR 2505975:2507199
DBSCAN-SWA_5 2584738 : 2595509 7 uncultured_Caudovirales_phage(16.67%) tRNA NA
DBSCAN-SWA_6 3262833 : 3397823 113 Bacillus_phage(19.23%) integrase,protease,transposase attL 3307854:3307913|attR 3356383:3356404
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage