CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP018463	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.2, complete sequence	0 crisprs	NA	0	0
NZ_CP018466	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence	0 crisprs	NA	0	0
NZ_CP018465	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.4, complete sequence	0 crisprs	NA	0	0
NZ_CP018464	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.1, complete sequence	0 crisprs	csa3	0	2
NZ_CP018467	Xanthomonas euvesicatoria strain LMG930 chromosome, complete genome	3 crisprs	DinG,csa3,WYL,cas3,DEDDh	1	6

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

44400 : 51349

uncultured_Caudovirales_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074038341.1\|44400_44820_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.6e-42	63.7
WP_074038344.1\|44816_45557_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	7.4e-83	68.0
WP_012480201.1\|45598_45913_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_074038347.1\|45939_46431_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	5.1e-24	41.7
WP_012480203.1\|46451_47510_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_074038350.1\|47513_48500_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	8.6e-63	44.4
WP_026070021.1\|48524_49598_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	3.8e-88	58.7
WP_037553621.1\|49848_50220_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_037553611.1\|50296_51349_+	PstS family phosphate ABC transporter substrate-binding protein	A0A1B1IWY0	uncultured_Mediterranean_phage	7.1e-23	28.8

DBSCAN-SWA_2

94965 : 129450

Salmonella_phage(20.0%)

integrase,transposase

attL 91823:91839|attR 128175:128191

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
91823:91839	attL	NA	NA	NA	NA
WP_005413373.1\|94965_96237_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_074038365.1\|96261_99255_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	5.4e-76	26.3
WP_049421089.1\|99528_101274_-	DUF4209 domain-containing protein	NA	NA	NA	NA
WP_074038366.1\|101563_101980_-	hypothetical protein	NA	NA	NA	NA
WP_074038367.1\|101976_102498_-	hypothetical protein	NA	NA	NA	NA
WP_049421086.1\|102604_103525_-	DNA-binding protein	NA	NA	NA	NA
WP_074038368.1\|103632_104712_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_074038426.1\|104719_105403_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA
WP_074038369.1\|106479_108012_+	transcriptional regulator	NA	NA	NA	NA
WP_074038370.1\|108831_109356_+	hypothetical protein	NA	NA	NA	NA
WP_129111536.1\|110459_110696_+	hypothetical protein	NA	NA	NA	NA
WP_074038373.1\|110788_111802_-	ATP-binding protein	NA	NA	NA	NA
WP_129111537.1\|111809_113084_-	hypothetical protein	NA	NA	NA	NA
WP_099523784.1\|113730_114393_-	hypothetical protein	NA	NA	NA	NA
WP_087944892.1\|115979_117135_+\|transposase	IS3-like element ISXc8 family transposase	U5P429	Shigella_phage	2.7e-47	41.0
WP_074038379.1\|117393_117891_+	hypothetical protein	NA	NA	NA	NA
WP_074038380.1\|118234_118498_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_029819460.1\|118501_118990_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_081711094.1\|118982_121139_+	site-specific DNA-methyltransferase	Q1MVP0	Enterobacteria_phage	2.3e-28	27.0
WP_074038381.1\|121142_123737_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_087942069.1\|123828_124960_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_029819457.1\|125037_126450_+	hypothetical protein	NA	NA	NA	NA
WP_011347842.1\|128073_129450_-\|transposase	IS5-like element ISXca5 family transposase	K4ICS3	Acidithiobacillus_phage	4.6e-62	47.0
128175:128191	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018467

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018467_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018467_1

1796482-1796553

Orphan

Consensus_repeat	Method
GATGCGAGTCCCTCGCAACAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018467_1

>merge|NZ_CP018467|1|1796482-1796553|CRISPRCasFinder
GATGCGAGTCCCTCGCAACAGCCTGCACATCCATGTGCGGGGATTTAACGAAGCGAGTCCCTCGCAACAGCC

>NZ_CP018467|1|1|1796482-1796553|CRISPRCasFinder
GATGCGAGTCCCTCGCAACAGCC	TGCACATCCATGTGCGGGGATTTAAC
GAAGCGAGTCCCTCGCAACAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018467.1\|WP_011347703.1\|1794924_1795536_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP018467.1\|WP_008573399.1\|1792430_1793531_+\|acetylornithine-deacetylase	unknown	unknown	gnl\|CDD\|181544
NZ_CP018467.1\|WP_011347701.1\|1797902_1798163_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367663
NZ_CP018467.1\|WP_014090341.1\|1793575_1794919_+\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|235306
NZ_CP018467.1\|WP_011347694.1\|1807150_1808302_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NZ_CP018467.1\|WP_011347705.1\|1790496_1791732_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235305
NZ_CP018467.1\|WP_008573380.1\|1806951_1807062_-\|cytochrome-bd-I-oxidase-subunit-CydX	unknown	unknown	gnl\|CDD\|369733
NZ_CP018467.1\|WP_011347709.1\|1785051_1786302_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP018467.1\|WP_011347702.1\|1796607_1797906_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP018467.1\|WP_011347698.1\|1800836_1803248_-\|glycoside-hydrolase-family-95-protein	unknown	unknown	gnl\|CDD\|379625
NZ_CP018467.1\|WP_039417123.1\|1787001_1788426_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP018467.1\|WP_074038534.1\|1805466_1806732_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340897
NZ_CP018467.1\|WP_008573408.1\|1786298_1786736_-\|SufE-family-protein	unknown	unknown	gnl\|CDD\|376883
NZ_CP018467.1\|WP_011347706.1\|1789410_1790442_+\|N-acetylornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235304
NZ_CP018467.1\|WP_011347697.1\|1803572_1805486_+\|CocE/NonD-family-hydrolase	unknown	unknown	gnl\|CDD\|225487
NZ_CP018467.1\|WP_029819580.1\|1788603_1789098_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018467.1\|WP_014090334.1\|1808318_1809941_-\|cytochrome-bd-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
NZ_CP018467.1\|WP_011347700.1\|1798176_1799331_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP018467.1\|WP_011347699.1\|1799491_1800736_+\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP018467.1\|WP_011347704.1\|1791972_1792425_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228

Protein	Function_ID	Function_description	E-value
NZ_CP018467.1\|WP_011347703.1\|1794924_1795536_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	5.16119e-22
NZ_CP018467.1\|WP_008573399.1\|1792430_1793531_+\|acetylornithine-deacetylase	gnl\|CDD\|181544	PRK08737, PRK08737, acetylornithine deacetylase; Provisional.	0
NZ_CP018467.1\|WP_011347701.1\|1797902_1798163_+\|hypothetical-protein	gnl\|CDD\|367663	pfam03795, YCII, YCII-related domain. The majority of proteins in this family consist of a single copy of this domain, though it is also found as a repeat. A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. This family also now includes the family formerly known as the DGPF domain (COG3795). Although its function is unknown it is found fused to a sigma-70 factor family domain in CC_1329. Suggesting that this domain plays a role in transcription initiation (Bateman A per. obs.). This domain is named after the most conserved motif in the alignment.	1.34791e-07
NZ_CP018467.1\|WP_014090341.1\|1793575_1794919_+\|acetylglutamate-kinase	gnl\|CDD\|235306	PRK04531, PRK04531, acetylglutamate kinase; Provisional.	0
NZ_CP018467.1\|WP_011347694.1\|1807150_1808302_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	7.04992e-123
NZ_CP018467.1\|WP_011347705.1\|1790496_1791732_+\|argininosuccinate-synthase	gnl\|CDD\|235305	PRK04527, PRK04527, argininosuccinate synthase; Provisional.	0
NZ_CP018467.1\|WP_008573380.1\|1806951_1807062_-\|cytochrome-bd-I-oxidase-subunit-CydX	gnl\|CDD\|369733	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein. This family contains a set of membrane proteins, typically 33 amino acids long. The family has no known function, but the protein is found in the operon CydAB in E. coli. Members have a consensus motif (MWYFXW) which is rich in aromatic residues. The protein forms a single membrane-spanning helix. This family seems to be restricted to Proteobacteria.	3.97495e-09
NZ_CP018467.1\|WP_011347709.1\|1785051_1786302_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.058e-63
NZ_CP018467.1\|WP_011347702.1\|1796607_1797906_+\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	2.21237e-162
NZ_CP018467.1\|WP_011347698.1\|1800836_1803248_-\|glycoside-hydrolase-family-95-protein	gnl\|CDD\|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	6.40273e-41
NZ_CP018467.1\|WP_039417123.1\|1787001_1788426_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP018467.1\|WP_074038534.1\|1805466_1806732_-\|MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.82121e-111
NZ_CP018467.1\|WP_008573408.1\|1786298_1786736_-\|SufE-family-protein	gnl\|CDD\|376883	pfam02657, SufE, Fe-S metabolism associated domain. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export).	1.26168e-61
NZ_CP018467.1\|WP_011347706.1\|1789410_1790442_+\|N-acetylornithine-carbamoyltransferase	gnl\|CDD\|235304	PRK04523, PRK04523, N-acetylornithine carbamoyltransferase; Reviewed.	0
NZ_CP018467.1\|WP_011347697.1\|1803572_1805486_+\|CocE/NonD-family-hydrolase	gnl\|CDD\|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	3.32323e-150
NZ_CP018467.1\|WP_014090334.1\|1808318_1809941_-\|cytochrome-bd-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
NZ_CP018467.1\|WP_011347700.1\|1798176_1799331_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NZ_CP018467.1\|WP_011347699.1\|1799491_1800736_+\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP018467.1\|WP_011347704.1\|1791972_1792425_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.53301e-11

>NZ_CP018467.1|WP_011347703.1|1794924_1795536_+|GNAT-family-N-acetyltransferase
MSVVTLPARWREQPNMRGRHASLEPLQTAHADGLREVVGDGALSRLWYTSVPAPEQVEAYIAAALAACADGAALPYAVRDAAGDIVGCTRYYALDAAVPRLSIGYTWYAPRVQRSGVNTETKLMLLQYAFETLGCLSVVFETSWFNHTSRAAIARLGAKQDGVLRNHARHADGTPRDTVVFSIIDTEWAGVKRHLQFRLEANA
>NZ_CP018467.1|WP_014090341.1|1793575_1794919_+|acetylglutamate-kinase
MSPSAQPHKQTRQTIVRLLSSMASAKEISQYLKRFSQLDAKRFAVVKVGGAVLRDDLDALTSSLSFLQEVGLTPIVLHGAGPQLDAELAAAGIEKHTVNGLRVTSPEALAIVRKVFQASNLKLVEALQQNGARATSITGGVFEAEYLDRDTYGLVGEVKAVNLAPIEASLQAGSIPVITSLGETPSGQILNVNADFAANELVQELQPYKIIFLTGTGGLLDADGKLIDSINLSTEFDHLMQQPWINGGMRVKIEQIKDLLDRLPLESSVSITRPSDLAKELFTHKGSGTLVRRGERVLRATSWDELDLPRLKSLIESSFGRTLVPEYFETTTLLRAYVSENYRAAVILTDEGQFGAGRLTYLDKFAVLDDAQGEGLGRAVWNVMREETPQLFWRSRHNNQVNIFYYAESDGCIKQEKWKVFWYGLENFEQIQHCVAHCATRQPTLLG
>NZ_CP018467.1|WP_008573399.1|1792430_1793531_+|acetylornithine-deacetylase
MTDLLTSTLDHLQALVAFDTRNPPRAIAAQGGIFDYLRAQLPGFQVEVVDHGAGAVSLYAVRGTPKYLFNVHLDTVPDSPHWSADPHAMRRLDDRVVGLGVCDIKGAAAALVAAANAGNGDAAFLFSSDEEANDPRCIAAFLARGVPYEAVLVAEPTMGEAVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGANALDHVQSLAHARFGGLTGLRFNIGRVEGGIKANMIAPAAEVRFGFRPLPSMDVDGLLASFAGFAEPAAAHFEETFRGPSLPSGDIARAEERRLAARDVADALDLPIGNAVDFWTEASLFSAGGYTALVYGPGDIAQAHTADEFVTLAQLQGYAESVHRIINGSH
>NZ_CP018467.1|WP_011347704.1|1791972_1792425_+|GNAT-family-N-acetyltransferase
MEPMPALRISTDKQELDLPLIHRFLSEQAYWCLGIPLDTVQRAIAGSLCFGGYCAGVGQVAFARVITDGATFGYLADVFVLDAHRGRGYGKQLVAAVMAHPHLQGLRRFMLATSDAHALYAQHGFAAPARPQALMEIAYPDLYRTTTTAA
>NZ_CP018467.1|WP_011347705.1|1790496_1791732_+|argininosuccinate-synthase
MSAASTNPESRIPTPGTKDIVLAFSGGLDTSFCIPYLQERGYAVHTVFADTGGVDAEEREFIEKRAAELGAASHVTVDGGPAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRAEELGTRIIAHGCTGMGNDQVRFDLAVKALGDYQIVAPIREIQKEHTQTRAYEQKYLEARGFGVRAKQQAYTINENLLGLTMSGGEIDRWEAPGEGARGWCAPRSAWPSEALTVTLKFVEGEAVELDGKPLPGAKILAKLNTLFAQYGVGRGVYTGDTVIGLKGRIVFEAPGLISLITAHRALEDAVLTKQQNRFKPDVARKWVELVYEGFYHDPLKSDIEAFLKSSQSKVNGEVTLETRGGRVDAVAVRSPHLLNTKGATYAQSADWGVEEAEGFIKLFGMSSTLYAQVNR
>NZ_CP018467.1|WP_011347706.1|1789410_1790442_+|N-acetylornithine-carbamoyltransferase
MSLKHFLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFNLGTVMDGETEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTQDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDQRYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTNNGVFSHCLPLRRNVKATDAVMDSPNCIAIDEAENRLHVQKAIMAALASQAGIGNRD
>NZ_CP018467.1|WP_029819580.1|1788603_1789098_+|hypothetical-protein
MLLCTFAGQVIPAYAAEPDPKNRVVVIENVKLDYAQVLNVEPVYQTLRATRIEEQCEAEQAAQAAAAPAEDEGRINRMVDSVKEMFSRRPEPAAPAAVPPTSTRRNCKVVEVPREFRRPIAFDVDYVYKGTKYRSRLPEDPGNRLRIRVSVTPYIPDAIVAPPR
>NZ_CP018467.1|WP_039417123.1|1787001_1788426_-|cysteine--tRNA-ligase
MSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRRYGALRYARNITDVDDKINAAAQAQGVPISTITDRFAAIYRQDMAALGVVPPDIEPEATAHIPQIVAMIEQLIATGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVDVAPYKRDPGDFVLWKPSSDDLPGWPSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDLQFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARHPPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEAESGSDLAVSMTIPAEVESALDDDLNTPLALSVMASIASDARALRSDLMQSGQASARMIELHAARAKLLGAGMALGLLQQDPAAWFSRGTDAGDDARITALVEERSAAKKAKDFARADAIRKQLAEEGIVLEDTPQGVRWKRA
>NZ_CP018467.1|WP_008573408.1|1786298_1786736_-|SufE-family-protein
MTTSPFPLEPTATEAQAAIAEEFSFFGDWSERYQYLIDLGRKLPAFPEQWKTEEHRLHGCQSMVWIVPEGNAERLDFHAVSDSAIVSGLIYLALRVYSGRSAQEILATEPDYIAGIGLAKHLSPTRSNGVAAMLAFIRDTARAQQ
>NZ_CP018467.1|WP_011347709.1|1785051_1786302_-|MFS-transporter
MSTPAPSPADSLRTLLAHPGFGLVLLYRVAAMLSYQIVAVTVGWHIYEMTGNPLSLGLIGLAEILPFFCIAPFAGYLVDHLPRRRLGMVAVLGLVATALLLLAITQGWLPVKGVWPIYAAISLTGAARSFLSPVYNALFARALPRDAFARGASIGSVTFQAGMVIGPALGGVLVGWGGKGLAYGVAASVAMLAILALALLRVSEPVSAGPRAPIFRSIAEGAQFVLSNQIMLAAMALDMFSVLLGGAVSMLPAFIHDILHYGPEGLGILRGAPALGSIVVGVWLARHPLQRNAGRVLLLSVAGFGLCTIAFGLSRHFWLSAAILLVYGMCDGVSVVVRQTILQLATPDAMRGRVSSINGIFIGSSNELGAFYDGVMARLVGLVPAVVIGGCVTLGVVATTAWKAPRLRRLDLRDLQ
>NZ_CP018467.1|WP_011347702.1|1796607_1797906_+|argininosuccinate-lyase
MTNLLWQKPGVAVDAKIQSFLAGDDVILDREFFLYDIAASKAHAQGLQHIGILSLQELGGLSEQLDLLAADFRSGAFVLDAQYEDCHSAIEARLTERLGDAGRKIHTGRSRNDQILVATRLWLKDKLQRVATLSAEIAKVALDRAQAEAGLPVPGYTHIQRAVVSSAGMWWAGWAEAFIDNAVRADDTVRLVDSNPLGTAAGYGVNLPLDRAHTTAELGFARLLVSPIYAQLSRGKYELAALEALGSATLDLRRIAWDLSLFTSGEFAFVALPAQYTTGSSIMPNKRNPDVIELMRATHASVAAARTEIEQLLSLPSGYHRDLQSSKGAIVHGFGRGLAALELLPALLANLEWRPDKLRAAIDSGMYATDVAVEAAVAGVPFREAYKAAAQAAETAGQGRTPEGSLAARVSPGAAADLQLDVLQARWQALRA
>NZ_CP018467.1|WP_011347701.1|1797902_1798163_+|hypothetical-protein
MTTRYLVLALRKPGFPADVVQPHLDFLDALRAAGQLELTGGFSDRSGGAYVLVNVATLQEAQQIVARDPLVLRDASALTVYEWNTH
>NZ_CP018467.1|WP_011347700.1|1798176_1799331_+|glutamate-5-kinase
MSTPASTLSPFTEQALPPWRRAVLKVGSSLLAADGGGLSPRFALGLAQFVSANLAAGRELVIVSSGAVAAGRAILPKAADVGAPIAARQALAALGQAQLIALWQRFFERPVAQVLLTHDDLRNRRRYLNARATLGELLRLGALPVINENDTVSVDELKLGDNDNLAAIVAALVDADALFIATDIDGLYSADPRSNPLARPLDDVPELTPEVLAMAGGSGSNVGTGGMRTKLEAAAKAGAAGIETYLFNGRSGEVVRALAQDRLRGTRIHAARARIAARKYWLRHAPVEAGAILIDDGAAAALTGKGASLLPGGVAGAQGDFRRGDMVEIRLRDTAGDQCLARGVSQYSALDIRRIAGRHSREIENVLGYSYGENVVHRDDLVVL
>NZ_CP018467.1|WP_011347699.1|1799491_1800736_+|glutamate-5-semialdehyde-dehydrogenase
MTIKTLALQCRDAAQVVSQLSAPAKHALLDAMAAALEADAAAILAANARDLEAARAKGTGSAMLDRLALDDKRLAGIAAALREVAQLPDPVGRITREDVRPNGIRVQKVRVPLGVIAMIYEARPNVTADAAALCIKAGNGVILRGGSEAIHSNTAIARALQRALREANVPDAALTLVEDLRRETMLELLQLNDIVDLAIPRGGEGLIRFVAEHARVPVIKHYKGVCHLFVDASAEMELALRLLIDGKATRPSACNSLETLLVHAGIAERFLPLAAQALRERKVELRGDAATQAVLPDIAAASDDDYAAEFLDLILAIRVVPDLDTALAHIRQYGSDHTEVIATQDADNAERFVQSLRSAVVMVNASSRFSDGGELGLGAEIGISTTRLHSYGPMGLEALTVERFVVRGEGQVRH
>NZ_CP018467.1|WP_011347698.1|1800836_1803248_-|glycoside-hydrolase-family-95-protein
MRDIPSHACADPHRRRLLTHLGAAALLPLLGRAGSSDATTPPARPTRSPVLPPEHALRLPYAAPAADAQLLREGLPIGNGRLGALCGGAPACETLFVSEGSLWSGGSNAVLQDDGQFAYTKEEFGSFMLLAKLFVELEGHAQAQVFDYQRELDMSNGCVRVRYRIGDTRYTRTLFASHPDAAIVLRLDCEGAGSHRGRIRLIDTHAGAGRADGDAGLRFAGQLDNGLRYAAALRVHSDDGSLETGDGLLQFRDCRGLTIVLCGDTDYAADGARGWRDPTRDPLARARHRAQAAASVPAALLLDTHVADHRALFDTLQVELGQSSDAQRGLETWQRIQARAAAPALPDPELEVAYLQFGRYLTIAASRDGLPTNLQGLWLENNEPPWMSDYHSDVNLQMNYWLADPSGLGTCVDALTRYCLAQLPSWTRITQAHFNDPRNRFRNTSGKIAGWTVAISTNPFGGNGWYWHPAGNAWLCDSLWQHYEFTQNRDDLTRIYPLLKGACQFWQAPLIAMEVTDADGRTRQCLVDDHDWSPEHGPENARGIAYAQELVWTLFGQYRQASALLGRDAAYAATVATLQQRLYLPEISPLSGQLQEWMSPTDLGEAHHRHLSPLMGLFPGHRLHPDLGPPAQVEAARRLLEARGMQSFGWACAWRALCWARLGDAERAYALVLTNLKPSIGHSNGTAPNLFDIYDLSQHGDPTLGGVFQIDANFGTPAAMLEMLLYSRPGQITLLPALPKAWAAQGRVTGLGARGGFTVDMAWRNGVPTQVSVRSVGGTRTRIAWGAQAHDITIARGQVRRVL
>NZ_CP018467.1|WP_011347697.1|1803572_1805486_+|CocE/NonD-family-hydrolase
MRRLAACLLATAIAAATGSAWAQTSPMTPDITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKGARNAPIMLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVKESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAIHSYAAMEPRDQRNTLNYLVMGPWRHSQVNYDGSALGALNFEGDTARQFRSEVLRPFLDQYLVDGAPKADTPPVFIYNTGENHWDRLKAWPRSCDKGCASSSRPLYLQAGGKLSFQQPVAGQAGFEEYVSDPAKPVPFVPRPVDFADRAMWTTWLVHDQRFVDGRPDVLTFVTEPLTEPLQIAGAPEVHLQASTSGSDSDWVVKLIDVYPEEMASNPKMGGYELPVSLAIFRGRYRESFSTPKPLASNQPLAFQFGLPTANHTFQPGHRVMVQVQSSLFPLYDRNPQTYVPNIFFAKPGDYQKATQRVYVSPEQPSYISLPVR
>NZ_CP018467.1|WP_074038534.1|1805466_1806732_-|MFS-transporter
MSVVTAASSSSAQLRGRGLVLAAILLSAFNLRTAVTSLTPLLERIADEYAFGAPTMGALGMLPTAAFALTGVATPALLRRFGLLRVALLSMALATLGLVLRPLLPGTAGLLVGSLVALAGMGMGNVVLPPLVKRYFGDRVGRVSTLYITVLQVGTLLPALLAVPVADALGWRSSMVAWVLPALLATAAWALVHANHRRIRATGPAPVTPTPEAEGRVARTALGWSMAVTFGMTSLVTYSMFTWLPTLLREAGASPAFGGTMVALFAALGMVGALTMPALAVRMRNPFPIVLLCAACHLVAFAGLWWAPLAAPVLWVTLLGLGPSTFPLALVLVNQRSRTAAGSAALSGFSQGVGYAVSCLGPFLFGWLHAHSGGWTSPFVFLVICLLVQLAAAWVACRPQFLEDAWTPPARGARALNVPAD
>NZ_CP018467.1|WP_008573380.1|1806951_1807062_-|cytochrome-bd-I-oxidase-subunit-CydX
MWYFAWILGTGLAALAAVLNGMWFEAREPERGEPPQ
>NZ_CP018467.1|WP_011347694.1|1807150_1808302_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MDFVLLDYTTLRVIWWLLLGVLLSGYAVMGGFDLGVGALLPFVASNDAERRLVINTVGPVWEGNQVWLILGGGAIFAAFPPLYAVSFSGFYLAMFLILFALILRPVGFKFRGKLVSPRWRSTWDWALFVGGFIPALIMGVAVGNVLLGVPFHFDDSMRTFYTGNLLGLLTPFALLAGLLSVAMLLAHGAAMLVLKTDGPVAERAARFGGIAALCALALFAAGGAWVALGLPGYAVTSVLATDAATNPLGKTAALTAAGGWLHNYSSMPATLMAPLVGLVGLAMSAVCLRLRRGGLAFIASGSAIVGIVFTVGFALFPFLLPSSSAPSASLTVWDASSSRLTLWIMLLATAVFMPIVLAYTSWVYRVLKGKVTDDAVTANPNAY
>NZ_CP018467.1|WP_014090334.1|1808318_1809941_-|cytochrome-bd-oxidase-subunit-I
MIDSTVVELSRLQFAVTAMYHFIFPPLTMGLSFLLGIMESVYVMTGKQIWRRMTMFWGVLFGINFAMGVGTGIVMEFEFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLEATFLGLFFLGWNRLSKVQHLITTWLVALGSNFSALWILIANGWMQNPAGAVFNPDTMRMEVVDFVAVLFNPVAQAKFVHTVSAGYVLGAVFVMSISAFYLLRGKHIEMARRSFAVAAAFGLLSSLSVVVLGDESGYAASEHQKMKLAAIEAMWETEAAPADFTAFGIPNQTTHRNDYAIKIPYLMGLIATRSLDEPIPGILELVGRAEHRIRGGQIAYGALQRIRADKNDAQARKVFDAHWQDLGHGLLLKRYRDDIGNATPEQIAQAAMDTVPRVLPLFWTFRIMAAIGMYLIAFFAVAFWFACKHNFQEKRWFLSLALWTLPLPWIAIECGWFVAEYGRQPWAVEGVLPTFYAASGLDLYEIVMTLVGFTALYTTLLVIAIKLSLKTINKGPEVLFPPMPPNALPAALQDHAPSRHAPLSSGAVAGSAP

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Crispr_ID: NZ_CP018467_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018467_2

2125186-2125256

Orphan

Consensus_repeat	Method
GCAGAGATGAGCCTTGAGTTCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018467_2

>merge|NZ_CP018467|2|2125186-2125256|CRISPRCasFinder
GCAGAGATGAGCCTTGAGTTCGGCTCTTTACCTGAAACCACGGTAATTGCAGAGATGAACCTTGAGTTCGG

>NZ_CP018467|2|2|2125186-2125256|CRISPRCasFinder
GCAGAGATGAGCCTTGAGTTCGG	CTCTTTACCTGAAACCACGGTAATT
GCAGAGATGAACCTTGAGTTCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018467.1\|WP_008571949.1\|2132730_2133234_-\|type-VI-secretion-system-baseplate-subunit-TssE	unknown	unknown	gnl\|CDD\|226049
NZ_CP018467.1\|WP_039416793.1\|2133221_2134055_-\|ImpE-protein	unknown	unknown	gnl\|CDD\|226862
NZ_CP018467.1\|WP_008571946.1\|2134087_2134591_-\|type-VI-secretion-system-tube-protein-Hcp	unknown	unknown	gnl\|CDD\|377536
NZ_CP018467.1\|WP_011347354.1\|2129876_2130887_-\|type-VI-secretion-system-baseplate-subunit-TssG	unknown	unknown	gnl\|CDD\|274530
NZ_CP018467.1\|WP_039416769.1\|2134690_2136208_-\|type-VI-secretion-system-contractile-sheath-large-subunit	unknown	unknown	gnl\|CDD\|226048
NZ_CP018467.1\|WP_011347357.1\|2125904_2126453_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018467.1\|WP_039417404.1\|2124625_2124823_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018467.1\|WP_008571950.1\|2130850_2132728_-\|type-VI-secretion-system-baseplate-subunit-TssF	unknown	unknown	gnl\|CDD\|377574
NZ_CP018467.1\|WP_011347367.1\|2112787_2113441_-\|type-VI-secretion-system-associated-protein-TagF	unknown	unknown	gnl\|CDD\|132416
NZ_CP018467.1\|WP_011347364.1\|2118217_2119555_-\|type-VI-secretion-system-baseplate-subunit-TssK	unknown	unknown	gnl\|CDD\|274536
NZ_CP018467.1\|WP_011347365.1\|2116899_2118216_-\|type-VI-secretion-system-protein-TssL	unknown	unknown	gnl\|CDD\|180801
NZ_CP018467.1\|WP_011347351.1\|2136200_2136707_-\|type-VI-secretion-system-contractile-sheath-small-subunit	unknown	unknown	gnl\|CDD\|226047
NZ_CP018467.1\|WP_011347366.1\|2113437_2116896_-\|type-VI-secretion-system-membrane-subunit-TssM	unknown	unknown	gnl\|CDD\|274531
NZ_CP018467.1\|WP_039417400.1\|2121481_2123419_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP018467.1\|WP_039417406.1\|2126644_2127094_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018467.1\|WP_074038553.1\|2127105_2129844_-\|type-VI-secretion-system-ATPase-TssH	unknown	unknown	gnl\|CDD\|274528
NZ_CP018467.1\|WP_011347362.1\|2120933_2121473_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018467.1\|WP_011347359.1\|2124161_2124641_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018467.1\|WP_039417412.1\|2123595_2123982_-\|TIR-domain-containing-protein	unknown	unknown	gnl\|CDD\|379328
NZ_CP018467.1\|WP_011347363.1\|2119551_2120937_-\|type-VI-secretion-system-associated-FHA-domain-protein-TagH	unknown	unknown	gnl\|CDD\|274537

Protein	Function_ID	Function_description	E-value
NZ_CP018467.1\|WP_008571949.1\|2132730_2133234_-\|type-VI-secretion-system-baseplate-subunit-TssE	gnl\|CDD\|226049	COG3518, COG3518, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	1.43912e-26
NZ_CP018467.1\|WP_039416793.1\|2133221_2134055_-\|ImpE-protein	gnl\|CDD\|226862	COG4455, ImpE, Protein of avirulence locus involved in temperature-dependent protein secretion [General function prediction only].	4.22571e-59
NZ_CP018467.1\|WP_011347354.1\|2129876_2130887_-\|type-VI-secretion-system-baseplate-subunit-TssG	gnl\|CDD\|274530	TIGR03347, VI_chp_1, type VI secretion protein, VC_A0111 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.02976e-116
NZ_CP018467.1\|WP_039416769.1\|2134690_2136208_-\|type-VI-secretion-system-contractile-sheath-large-subunit	gnl\|CDD\|226048	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	0
NZ_CP018467.1\|WP_039417412.1\|2123595_2123982_-\|TIR-domain-containing-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	0.000451428
NZ_CP018467.1\|WP_011347367.1\|2112787_2113441_-\|type-VI-secretion-system-associated-protein-TagF	gnl\|CDD\|132416	TIGR03373, VI_minor_4, type VI secretion-associated protein, BMA_A0400 family. Members of this protein family are found exclusively, although not universally, in bacterial species that possess a type VI secretion system. Genes are found in type VI secretion-associated gene clusters. The specific function is unknown. This model represents the rather well-conserved amino-terminal domain of a protein family in which carboxy-terminal regions, when present, show little conservation. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	6.09546e-32
NZ_CP018467.1\|WP_011347364.1\|2118217_2119555_-\|type-VI-secretion-system-baseplate-subunit-TssK	gnl\|CDD\|274536	TIGR03353, VI_chp_4, type VI secretion protein, VC_A0114 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	3.41924e-180
NZ_CP018467.1\|WP_011347365.1\|2116899_2118216_-\|type-VI-secretion-system-protein-TssL	gnl\|CDD\|180801	PRK07033, PRK07033, DotU family type VI secretion system protein.	1.05452e-111
NZ_CP018467.1\|WP_011347351.1\|2136200_2136707_-\|type-VI-secretion-system-contractile-sheath-small-subunit	gnl\|CDD\|226047	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	1.1132e-70
NZ_CP018467.1\|WP_011347366.1\|2113437_2116896_-\|type-VI-secretion-system-membrane-subunit-TssM	gnl\|CDD\|274531	TIGR03348, VI_IcmF, type VI secretion protein IcmF. Members of this protein family are IcmF homologs and tend to be associated with type VI secretion systems. [Cellular processes, Pathogenesis].	0
NZ_CP018467.1\|WP_039417400.1\|2121481_2123419_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
NZ_CP018467.1\|WP_008571950.1\|2130850_2132728_-\|type-VI-secretion-system-baseplate-subunit-TssF	gnl\|CDD\|377574	pfam05947, T6SS_TssF, Type VI secretion system, TssF. This is a family of Gram-negative bacterial proteins that form part of the type VI pathogenicity secretion system (T6SS), including TssF. TssF is homologs to phage tail proteins and is required for proper assembly of the Hcp tube (the T6SS inner tube) in bacteria.	0
NZ_CP018467.1\|WP_074038553.1\|2127105_2129844_-\|type-VI-secretion-system-ATPase-TssH	gnl\|CDD\|274528	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP018467.1\|WP_008571946.1\|2134087_2134591_-\|type-VI-secretion-system-tube-protein-Hcp	gnl\|CDD\|377536	pfam05638, T6SS_HCP, Type VI secretion system effector, Hcp. HCP is a family of proteins which are expressed in up to 1000 copies in Gram-negative bacteria. Together these copies aggregate into a needle-like shaft or tube that will penetrate other bacteria via a puncturing protein attached to its head. Initially Hcp forms a hexameric structure with a central channel of 40 Angstroms. These hexamers pile up one on top of each other forming nanotubes resembling the gp19 tail phage tube.	9.43242e-31
NZ_CP018467.1\|WP_011347363.1\|2119551_2120937_-\|type-VI-secretion-system-associated-FHA-domain-protein-TagH	gnl\|CDD\|274537	TIGR03354, VI_FHA, type VI secretion system FHA domain protein. Members of this protein family are FHA (forkhead-associated) domain-containing proteins that are part of type VI secretion loci in a considerable number of bacteria, most of which are known pathogens. Species include Pseudomonas aeruginosa PAO1, Aeromonas hydrophila, Yersinia pestis, Burkholderia mallei, etc. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.58092e-106

>NZ_CP018467.1|WP_039417404.1|2124625_2124823_-|hypothetical-protein
MPFTYTHWIQQASRVLHPCSAELPALDILIDAYGRTPSENNLRCLKNAFRPWRDAQGEGDAWIDS
>NZ_CP018467.1|WP_011347359.1|2124161_2124641_-|hypothetical-protein
MDRQLAQRQEDAAVRDAEHGAVQGWRQRHKDLITRRQYDAGMAQMGLPKDFSSRYVEESGYAPSSEDGLVEEWIKPGLRAEGSVWRRHVLIRSGHSSVDALHDSTTITENDMDNAVTGAHGQAGLHWVGHVGHERVGFRDPRGVMLRSRVQDPARRVSA
>NZ_CP018467.1|WP_039417412.1|2123595_2123982_-|TIR-domain-containing-protein
MRSPTGAMPIGAMREDWNALYQAAMRQAQLMLFCYTDEFRDSQWCRQEWDQFIGQKAGRPADRQLRGLILEFTTDACTLPGSRGDGVTRIPVAKTDGGRCGLAWDKGDYILSSTDYARVLAQIQQLIR
>NZ_CP018467.1|WP_039417400.1|2121481_2123419_-|type-VI-secretion-system-tip-protein-VgrG
MAHAITLQSPLGKTLRFVRMSAHEALGRPYAFVLHGISRDVAIDLRALLGKPMAVKVTSPQGYVRHYHGIVAEAEQTGFEQIEGLRYATYAFSLVPKLWLLGQRRDCRIYKNKSVPELVRALLADVGCTDVKLRLSASYRPREYCVQYRESGLDFVSRLMEQEGIYYYFEHSASTHTLVLADSLGGHEAVAPFAQIPYCPPGQKGSRMKDAITDWSLARSAHSTRVRLDDYDYLKPKASLRVNETPAESSGPALGELEVFDYPGEHLDIAAGRRHAQVRAEALNVAQAQYQGWTDACGLQVGALFKLRDFPLAEHNQEYLVTSANTELVEVDYVSGGETVAEPFASTFRALRSRQPYRSPQTTPRPSIAGLQTAVVDGKTPEDIAVDQHGRVQVNFFWSPPGTPNAYCSCPVRVAQAWAGKRWGAQHIPRVGQEVVVSFLEGNPDRPLIIGSVYNADQMPPYALPEHRTRSGVKSRSLLGGAEDYNEIRFDDKKGNEELLLHAQRDLRHEVENDHFVTVDRNETAEVKRERSHTVGGNDRLDVGKALRIQAGSEIELVTGMARLQLKASGEIVLSGTRLTLDGRVSVGIQGGVSVDVSAMANLTLRSNASVLLQSNAVTTARANAALLLQSSGPAVLKGTPPIIA
>NZ_CP018467.1|WP_011347362.1|2120933_2121473_-|hypothetical-protein
MLQILPAARQMRLSPCAHAALAPDMAPETAVRELLARGLAQDALPLALRLLPRPYAVAWLCQCMRAQTLSGHDSEGLRLAQAWVQQPGPTQRESARAFAADDDYQSVGAWLAAAAAWSDGSLSEEDGPPVADHLTAAAAVAALLHLAGREPATFEAQLVRWSEDAARLLSGLRVRERTP
>NZ_CP018467.1|WP_011347363.1|2119551_2120937_-|type-VI-secretion-system-associated-FHA-domain-protein-TagH
MSAVSPRLTLTVRDAQAVSGSRPPQASFAAEGGRIGRDASCDWVLEGEGVSRLHASVRYLDGVYFIEDHSTNGVLHNGVPLRAGFPVPLHAGDALRIDAFEIDVAVEGAGVTAVPAATQTWNHAEPWTLSPTPPPQPSQQPPLERERDVFAELGAASTQPADTDPLALFATSFTLAGSQGDAAAFGLGHAPAMADAYRAPVAVPAAAGVVLPEHWDLTRSEFALPPAADAIAAVQRPLQPAPVSVVAAAPAPTPTPMPMPASASEVAPASTSTTVPTAAQPVVAQSPDAPELPALFAAMTAGLMDVLRARAELKNSLRLPVTLIQRTENNPLKFAATVDEAVARLLAPAGPGYLTGAAAIDEAMEDIGRHQVALLAGMRAAFEHVFTQFDPARFEADAAGHSALAAWGNRPWRRYAQHYRELLGDPDERFRRLFGEEFARAYEQQLARAKTQAQPADGDRA
>NZ_CP018467.1|WP_011347364.1|2118217_2119555_-|type-VI-secretion-system-baseplate-subunit-TssK
MTPYNKVIWSEGLFLRPQHMQQQERYLERYMELQAGALRPHAWGFSQLELEPELLAIGKLGIRRARGCFPDGTPFSIPDRDPAPPALDVPANCRDQVVSLALPLRATAQPDSAWPDGDGSRLARYRVGEAEVGDASGSIAGTVLLEVGVLASRLRLQSEPGEGLVEVPMARIVECRADRRVILDDAFIPTASRIEGAARLSTLLAELLGLLHQRGQALAERVAGSDRGGVAEIADVLMLQVINRYQPLVAHWASAPLEHPEALYCVLLGMAGELATFTRASKRSGPFPPYAHDALQASFEPVVASLRESLSAVLEQSAIAVPLQQRKYGVWVGMVPDPALLDSAAFVLAVKADLRAEDLRKRLPTESKIGPVEKIRDLVNLQLPGVAVSALAMAPRQVPYHAGCAYFELDRQSSLWKTLRTSGGVALHFGSGFPGLELELWAVRN
>NZ_CP018467.1|WP_011347365.1|2116899_2118216_-|type-VI-secretion-system-protein-TssL
MSNTVDQHDDDATVVRSATPAPRPAAATPARQATTRTVQPPDLDAAMRAAPGAMQGNAVVRAATPLLLLAVQLRHSTQTPDIATLREHCSTRLQRFEQELRQQGIDDKTGIAARYVLCTLLDEAVLAAPWGEGSGWSQRTLLVTFHGETYGGAKVFDLLDRLARDPARHLDLLELLYLALALGFGGRYRVEQGGRARLADRQAELYQLIQRQRLPAPAELSPNWQGAQAPLLRNTAATPLWIATLASLCIVLLAFVWLHARLNALTAPISAQLARIGLERVTLPIPAAATPATSAALAPLLAAEQRAGWLTVQTEGDGRSTVRLASASMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAQSVGAVLAAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILLIPET
>NZ_CP018467.1|WP_011347366.1|2113437_2116896_-|type-VI-secretion-system-membrane-subunit-TssM
MRLVLDFLRTRYVASAAVLALLAMLVWVGGPYLSVGRLQPLASVSGRLLAVAVLLLVWAGWRYLRWRRDNAKQQRMAGELVGQGASAEDASGNDSRARAAQEQVRLRARFAEAMAVLRRRRRNGPGLHVLPWYLLIGAPGSGKSTLLQSSGLEFPLKEHGNHAALEGVGGTRNCDWWFADQAVFLDSAGRYTTQDSDAIADAGAWHGFLDLLRRHRRQPLNGVIVTVSVAELLELDGDAGLSHARAVRHRLDELVDKLRARVPVYLVVTKCDLVSGFAEFFADLDAAGRAQVWGVSFPQAQAADDTDPLTPFPTELERLLERIDQRVLERLHRARDARERAAVLSFPQQLRLLQPALMEFVQTAFGRHGYAGQPWLRGVYLSSGTQQGHPIDRVISAVARHFGVAAAGLPPAISAPRSYFLPRLLNDVVFAEAGLAGSQPGSAQRRRLLQLACWAVLTATTLGVLSGMAGSYARNVQLIGQVRDALDAYPAGALPADAGEAAFYAKALQRFDALARARDVALPPGQSIPWSRRFGLHQGRALARDVQDAYLRDLNGALLPALAQSLRRKLEQASNDPQRLYPLLKGYLMLGDPARRDVLHLATLAGTVWRQIFPDDASVRAGLNRHLRALLGPVDGARALALDRQQIEQTRASLRTAELPALVYGGLKLTQPGVDAGQAPRLDRRLGLLGDVFERRSGLPLSAPLPPLFTRQAFQAQTGGGIARGVQQFLADDWVLGTAPLDPLARSQLERQVLALYQRDYIAAWDSLLADLVLRPVTQTGQASAVAAKLGGPASPLKALLVLLREHTHALGRTPPAKGGASAAAGGEATAAAEPDVAADPIERHFEPLNRLLDGGPGASALDETLAALTQMSRTLLGAAAGVAADQNDPALLIAAQQAEQLPPPLGNWMATLSGRGRALTASSAGEALRNAQRQAAGRECALLVSGRFPFVPGSRNDIPLRDFAELFGPGGRMDRFAQQSLLGKVDTSGRRWQWNPGMAAVGADDVLERAQLADEIKQAFFAGGGAQPQVAFTVSIPPQAAISRLQLEVDGQTLEVREGARASQSMTWPGPNPGLVRVAAWDASGQALPVLEYRGPWAWFRALQAGRLRRSGDLDYTASLALGSATVRMDVQPASLRHPFAASAVQRFSCP
>NZ_CP018467.1|WP_011347367.1|2112787_2113441_-|type-VI-secretion-system-associated-protein-TagF
MSAMQRPPGFYGKLPAVGDFVHRRLPESFVDPWHVAMQDVLSAAGAVSRAPEGQAPVWRFVLPTGLAGTAAWAGAMRASVDRVGRAFPLVIAAPLPAGDAGGTTAAVMPTYLHLPTWLDAADTVLCNIGAERRQDGAWLDRVCVTLAQQAHDETTMSASPPLSAGAITAGSSLWWTAMTGSAPGAWMQFAGWPAACHAHVLLGALQTANACVAEDMQ
>NZ_CP018467.1|WP_011347357.1|2125904_2126453_-|hypothetical-protein
MVNAKYITEETAAHGRVLAFPNVSSCVAVVVVLPDELVGWHVTVKTLDSIDKGMAAQGAAKFLDYARSGTPRRLLIVGHFTHHDPTALRDWVRAQLAVDLPTQSFDITRHRKAETNVAYHLFFEHNGHDIPQITFKNSTKVGVSNVTNGESGVPNGGLPVHNRSADFTVSRWHRLRRHFVDV
>NZ_CP018467.1|WP_039417406.1|2126644_2127094_-|hypothetical-protein
MVAKATVYLNGIEYGSSDAAMGGGRRGGPVNDLADHAERKAWREAWPRICREVRATADGTPFEITIEVNMTICADCQKWMIVEVRRHLGQLGRAFTFYATVGKEKPVVVARDTVWNAKVGQCRLWKADRSDLQMGRVRKHEVIYEKTRG
>NZ_CP018467.1|WP_074038553.1|2127105_2129844_-|type-VI-secretion-system-ATPase-TssH
MADISRAALFGKLNKTTYRGIESATAFCRLRGDREVDLLHWLHQLLQAQDGDLHRIVRHFSLDAARLAQDLTAALDRLPRGGGGHFDLSASVEEAVERAWVHCTLRYGRQRIRGGDLLVAILHTRSLRNGLLAMSSEFGKLRAEALADDLDAIVAGSPEDDATDIAAASAPAGPAAAGGTAALALYTVDLTAQAREGKLDPIIGRDDEIRQVVDILMRRRQNNPILVGEAGVGKTAVVEGFAQRIARGDVPPALKDVQLRTLDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPIILFVDETHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTFAEYKKYIEKDPALTRRFQAVQVDEPDEAKAVRMMRGVASMMEQHHRVQILDEALEAAVKLSHRYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRRRIESLETEHAIIERERAIGIVVEERAAACANLLQSEHSRLRELDQRWVGEKALVDELLSLRAQLRSSNSSVEGTGSALEAEADTDADAAADAAVAQSASGDTAVLDAPVQVDRDTLLARLQLVQAELAALQGESPLILPTVDYQAVAAVVADWTGIPVGRMARNEIDTVLRLPDLLAKRVIGQDHAMEMIAKRIQTSRAGLDNPDKPIGVFLLAGTSGVGKTETALALAETLYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAGTDLIASLCKDPELIPDPEAMAKAIREPLLKVFPPALLGRLVAIPYYPLSNDMLGQIVRLQLNRIKKRIEERYKIPFEYDHSVVELVVSRCTESESGGRMIDAILTNSMLPEISRQFLTRVIEGKKINHSRASAVADGFFYEF
>NZ_CP018467.1|WP_011347354.1|2129876_2130887_-|type-VI-secretion-system-baseplate-subunit-TssG
MASPSRQSADPVALLAHLEAQPQDFELFEALRRLECEHPAQPRLGQAARPLEEPVRLGQRASLEFPPRDIDSLQPGPDGLPPTLRTLALGLFGPHGALPLHLTEHAIEREGAGDPTFAAFADIFHHRMIALWYRAWADARPTVQMDRPGEDRFGARLDALTGVDQPALRGRDAMPLAARRHFAGRFVAQARNAEGLRAVLIGLFDVSVQVQEFVANWLPLPEEGRLRMGRAAARMGRDATLGASARNAQHRFRLRIGPLEIARYREFLPGGPALEVLTAAVRGYVGDEQAWDLQLVLAREDVPLPLMGQGQRIGLSLWLGHYRRPRDADQLVLAPS
>NZ_CP018467.1|WP_008571950.1|2130850_2132728_-|type-VI-secretion-system-baseplate-subunit-TssF
MDPRLLHHYNRELQHVREMGAEFAQAYPKVAGRLGMSGIECADPYVERLLEGFAFLSARVQLELEAQQPVFAQHLMDMLYPHFLSPVPSMAVVELQPEQGEGIGPAGHLVPRGSALRSLIGHGDRTACEYRTAHAVTLWPLRLTAASYLASPAALATLGVPVESRARAGLRLVFTVNAGLRLDMLALDTLPIFITGADGLAGSLYEQLHANALGFVVRARAADGQVLSRNFGPEHLQPQGFDDEQALLPRSERSFSGYRLLQEYFACPERFLFAAFDGLAQVLPRAACTEFEIVVWFDRAVERLDNAVDASNFRLHCTPAINLFPRRGDRIHLQPGICEHHVLADRTRPMDFEIHGVEQVEGFGDGNTPMQRFEPFYGAQPRSWHERRSAFYALRRQPRRLSTGQRRTGPRSSYVGSEVFLSLVDGDQAPYPHQLRQLGMQLWCSNRDLPLHMPVGKSSTDFVLDDGGPVAAIRCVAGPTRPRSGVTAGDTRWRLISHLQLNYLSLLEAGDDGATAVREMLTLYHDPHDAAARRQVEGVRRIASRPIVRRIPVPGPATYGRGLEITLTCDDAAFEGQGVYLLASVLRHVFARQASLNSFTETVLCTLERNEVVRWPAHLGNRPIL
>NZ_CP018467.1|WP_008571949.1|2132730_2133234_-|type-VI-secretion-system-baseplate-subunit-TssE
MAELTQQERLQPSLLDRLIDDRRHELAESRDARAIGPAKLRDCVMRDLTWLLNCTRHWHEDALQAYPHVATSVLNYGIPDLAGARLAGLDVVELQNRIHAAIVAFEPRLAAASLQVTAKVDTGRMDRMSLSFVIDSELWAQPLPLALYLRTDLDLETGRFSLSSGAH
>NZ_CP018467.1|WP_039416793.1|2133221_2134055_-|ImpE-protein
MSTVHPEHACARLIKADNPEASLATAKEWVRQCPADAQARIGLFQLLAVVGDWERARQQLLLAADLDQAWIGVAGAYACILDAEREREQVLAGRMMPLMPGQVPQWQHDLLQALQHDRDGEPAQAARRRALALTQADAIAGHVDGERFDWLADADPRFGPCLEVILEAGYAWLPFAQLRSLRFEVPGSLRDMLWQSVEIQWRDGTHSRGVVPCRYPGSHHSDDGAIRLGKRITWQGEDLSACGLGQRLLAGSEDDYPLLDIRHIAFDTAAVAAPWPN
>NZ_CP018467.1|WP_008571946.1|2134087_2134591_-|type-VI-secretion-system-tube-protein-Hcp
MAFDMHLKFGSGDVEIKGASNHSKHKDEVPIIAWSWGTSNTGNLHTGAGYAAGGKANVQDISVTKYVDSCSNALLNACCTGARVDSATLYVTNATGEQTDYVTIELSEGVMITSVSTGGSGGEDRLTENVTLHFGKFKYSFQPQDDKGKKQGGTKDFTFNMQEVKKS
>NZ_CP018467.1|WP_039416769.1|2134690_2136208_-|type-VI-secretion-system-contractile-sheath-large-subunit
MSNPMATQNSSATQDLADAQPLTSQSDDFAALLTREFRPRSERAGEEVRLAVRTLAEQVLERSDIISDDLAQTINAYVAEIDRKITEQLNLILHAPHFQALEGAWRGLHYLVSNTESDTQLKIRVLNVSKKELAKNLKRFKGTAWDQSPVFKKIYEAEYGQLGGEPYGCLIGDYHFDHSPQDVDTLRGISQIAAASHAPFIAAAGPGLMGMESWSELSNPRDLAKIFSTPDYAAWRSLRQSEDAKYLALAMPRTLARLPYGAKTDPVEAFDFEEDTQGADSSRYTWQNAAYAMAVNINRSFKQYGWCTRIRGVESGGAVEGLPTHTFPADDGGVDMKCPTEVAITDRRSAELDKMGLMPLVHRKNTDMAAFIGAQSLGKPEEYDDPDATANAALSARLPYMFACCRFAHYLKCIVRDKIGSFSTRQQMQSWLTDWVMNYVDGDPANSSEETKARKPLAAAEVVVEEVEGNPGYYTSKFYLRPHYQLEGLTVSLRLVSRLPSAQAA
>NZ_CP018467.1|WP_011347351.1|2136200_2136707_-|type-VI-secretion-system-contractile-sheath-small-subunit
MSVRSSSQKFIARNRAPRVQIEYDVEIYGSQKKVQVPFVMGVLSDLSGANTENLPALEARDAVEIDIDNFDSRLRAMQPRVAMSVSNTLTGSGELPVDITFDSLDDFSPTAVVKTVAPLAELLEARTQLANLGTYLDGKAGAERLIADAIKDPTLLRSLVAAPKSTDE

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Crispr_ID: NZ_CP018467_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018467_3

2942440-2942535

Orphan

Consensus_repeat	Method
CGGGACCCGGGACCCGGAACAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018467_3

>merge|NZ_CP018467|3|2942440-2942535|CRISPRCasFinder
CGCAACCCGGGGCCCGGGACCCGGGACCCGGAACAGCTGCAAGTGGGCAGGTTGGTGGTGCCGCTTTAGAGGTCGGGACCCGGGACCCGGAAAAGC

>NZ_CP018467|3|3|2942440-2942535|CRISPRCasFinder
CGCAACCCGGGGCCCGGGACCCG	GGACCCGGAACAGCTGCAAGTGGGCAGGTTGGTGGTGCCGCTTTAGAGGT
CGGGACCCGGGACCCGGAAAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018467.1\|WP_033479580.1\|2950447_2951755_+\|polyhydroxyalkanoate-depolymerase	unknown	unknown	gnl\|CDD\|130908
NZ_CP018467.1\|WP_003485378.1\|2939175_2939634_+\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP018467.1\|WP_011346885.1\|2947516_2948272_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|227044
NZ_CP018467.1\|WP_011346886.1\|2942725_2946316_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_CP018467.1\|WP_011346882.1\|2951883_2952801_-\|membrane-protein	unknown	unknown	gnl\|CDD\|379374
NZ_CP018467.1\|WP_011346884.1\|2948361_2948811_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018467.1\|WP_008578281.1\|2935403_2937770_+\|outer-membrane-protein-assembly-factor-BamA	unknown	unknown	gnl\|CDD\|274514
NZ_CP018467.1\|WP_008578271.1\|2946499_2947459_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NZ_CP018467.1\|WP_011346883.1\|2949535_2950138_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369778
NZ_CP018467.1\|WP_011346893.1\|2931926_2932754_+\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|366491
NZ_CP018467.1\|WP_011346894.1\|2931171_2931930_+\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|237831
NZ_CP018467.1\|WP_008578264.1\|2952797_2953160_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP018467.1\|WP_011346890.1\|2937846_2938038_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018467.1\|WP_008578280.1\|2938165_2939179_+\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	unknown	unknown	gnl\|CDD\|234858
NZ_CP018467.1\|WP_008578268.1\|2949015_2949462_-\|membrane-protein	unknown	unknown	gnl\|CDD\|367596
NZ_CP018467.1\|WP_008578263.1\|2953532_2955086_+\|alginate-export-family-protein	unknown	unknown	gnl\|CDD\|372583
NZ_CP018467.1\|WP_039418601.1\|2940480_2941767_+\|lipid-A-disaccharide-synthase	unknown	unknown	gnl\|CDD\|234580
NZ_CP018467.1\|WP_011346891.1\|2933973_2935320_+\|RIP-metalloprotease-RseP	unknown	unknown	gnl\|CDD\|182723
NZ_CP018467.1\|WP_011346892.1\|2932756_2933947_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|235472
NZ_CP018467.1\|WP_011346889.1\|2939659_2940451_+\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	unknown	unknown	gnl\|CDD\|235390

Protein	Function_ID	Function_description	E-value
NZ_CP018467.1\|WP_033479580.1\|2950447_2951755_+\|polyhydroxyalkanoate-depolymerase	gnl\|CDD\|130908	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some [Fatty acid and phospholipid metabolism, Degradation].	0
NZ_CP018467.1\|WP_008578271.1\|2946499_2947459_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NZ_CP018467.1\|WP_011346885.1\|2947516_2948272_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|227044	COG4700, COG4700, Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats [Function unknown].	2.68018e-60
NZ_CP018467.1\|WP_011346886.1\|2942725_2946316_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP018467.1\|WP_011346882.1\|2951883_2952801_-\|membrane-protein	gnl\|CDD\|379374	pfam13796, Sensor, Putative sensor. This family is often found at the N-terminus of proteins containing pfam07730 and pfam02518. The N-termini of proteins containing these two domains often function in stimulus sensing.	8.67053e-32
NZ_CP018467.1\|WP_008578281.1\|2935403_2937770_+\|outer-membrane-protein-assembly-factor-BamA	gnl\|CDD\|274514	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog, YtfM, that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244), followed by an outer membrane beta-barrel domain (pfam01103), while the YtfM family typically has a single pfam07244 repeat. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP018467.1\|WP_011346883.1\|2949535_2950138_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	7.62064e-07
NZ_CP018467.1\|WP_011346893.1\|2931926_2932754_+\|phosphatidate-cytidylyltransferase	gnl\|CDD\|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	6.75748e-66
NZ_CP018467.1\|WP_011346894.1\|2931171_2931930_+\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|237831	PRK14836, PRK14836, undecaprenyl pyrophosphate synthase; Provisional.	1.15908e-162
NZ_CP018467.1\|WP_003485378.1\|2939175_2939634_+\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	3.06233e-81
NZ_CP018467.1\|WP_008578264.1\|2952797_2953160_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	1.38706e-18
NZ_CP018467.1\|WP_008578280.1\|2938165_2939179_+\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	gnl\|CDD\|234858	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional.	1.42102e-173
NZ_CP018467.1\|WP_008578268.1\|2949015_2949462_-\|membrane-protein	gnl\|CDD\|367596	pfam03653, UPF0093, Uncharacterized protein family (UPF0093).	3.52541e-44
NZ_CP018467.1\|WP_008578263.1\|2953532_2955086_+\|alginate-export-family-protein	gnl\|CDD\|372583	pfam13372, Alginate_exp, Alginate export. This domain forms an 18-stranded beta-barrel pore which is likely to act as an alginate export channel.	1.29105e-31
NZ_CP018467.1\|WP_039418601.1\|2940480_2941767_+\|lipid-A-disaccharide-synthase	gnl\|CDD\|234580	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed.	0
NZ_CP018467.1\|WP_011346891.1\|2933973_2935320_+\|RIP-metalloprotease-RseP	gnl\|CDD\|182723	PRK10779, PRK10779, sigma E protease regulator RseP.	4.79365e-123
NZ_CP018467.1\|WP_011346892.1\|2932756_2933947_+\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NZ_CP018467.1\|WP_011346889.1\|2939659_2940451_+\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	gnl\|CDD\|235390	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase.	7.89975e-151

>NZ_CP018467.1|WP_039418601.1|2940480_2941767_+|lipid-A-disaccharide-synthase
MDGQRNGASVGSDPTALPIPHSPLPIPGAHARPPRIALIAGEASGDILGAGLIEQLRLRYPNAEFVGIGGDAMRGVGCQTWFDASELAVMGLTEVLRHLPRLLKLRSAFRERVLAWKPDVFIGIDAPDFNLPVERWLKQRGIKTVHYVSPSVWAWREKRAEKIGVSADLVLCLFPMEPPIYARHGVDARFVGHPMADDIAYQADRAAARATLGLSASSTVLAVLPGSRHGEISRLGDTFFQAAWLVSEHLPNLHVLVPAANPGCKQLLAEQLSRSSLPVMRSHLLDGQARTAMLAADVVLLASGTATLEAMLVKRPMVVGYKVAPLTYRIVKLLGLLKVNRYALPNILANDDLAPELMQDDCAPERLCVALLDWFKHPDKVAALQPRYLALHAQLRRDASARAADAVAGLLEGRDSEVGIWDSAGAKA
>NZ_CP018467.1|WP_011346889.1|2939659_2940451_+|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase
MRDSTPLIHPTAVIDPSATLADDVRVGAFSLIGADVQIGAGTEVGPHCSIHGPTRIGRNNRFIGHAAIGGEPQDKKYAGERTELVIGDGNVIREFVTINRGTGGGGGVTVVGNDNWMLAYTHVAHDCHVGNHCVFSNNTTLAGHVTVGDYVIISGFAGAHQFCRIGAHAFLGMGALTNGDVPPFTMVGSDSLGRPRGINSEGLKRRGFDAERITAIKRAYRTLYVAGLPLADAKLQLAEQAKSSEDVRGMLEFIEAAERPLLR
>NZ_CP018467.1|WP_003485378.1|2939175_2939634_+|3-hydroxyacyl-ACP-dehydratase-FabZ
MSHHVYELPIDVSQIQTLLPHRYPFLLVDRILELDLETKWIVAQKNVSINEPFFQGHFPNRPVMPGVLIIEALAQVGGVMTQLGLGRDALSQLFYMVKVDKARFNKQVVPGDVLIMEVQMKRLIRNVGCFYGEAKVDGEVVASAEVMCAGAR
>NZ_CP018467.1|WP_008578280.1|2938165_2939179_+|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase
MRLTASAIAEQFGLTVVGDGTTEVSGVATLAHAGAGQLSFLSNPRYRPQLADTQAAVVVLRADDADAAKGTALVAKDPYTAFAKIAALFDVAPVREPGIHASAVIDPTAQVSPGAHVGPFVSIGARSRVGDGCVIGTGSIIGEDCVVDEGSELLARVTLVTRVRLGKRVRIHPGAVIGADGFGLAMDAGHWIKVPQLGGVVIGDDCEIGANTCIDRGALEDTVLEEDVRVDNLVQIAHNCRIGAHSAIAGCTGIAGSAKIGRYCLLGGHVGVVGHLEICDKVVITGKSVVRNSIHEPGEYSSGTPLTDNRTWRKNAARFKQLDVLARRILAVGKEKE
>NZ_CP018467.1|WP_011346890.1|2937846_2938038_-|hypothetical-protein
MKTVLSIFGSVILLGAITSASADDFAQQRTSALSFWDQQVQCVDASDWGATATCLGNVWNNYF
>NZ_CP018467.1|WP_008578281.1|2935403_2937770_+|outer-membrane-protein-assembly-factor-BamA
MTRLPTRRLLALALAAGLSLPAVALAVEPFVASDIRVDGLQRIASGTVFTYLPVNRGDTVDDAKVADAIRALYRTGFFEDVQLDRQGNILVITVKERPAINKLTVTGNKDIKSEELLKGLGDIGLSEGGTFDRLSLDRVTQELTRQYNNRGKYNVEITPTVSPLDRNRVDVAIAIKEGKAAKIRHVNLIGTEKFANEDILDNWESKEHNWASWYRRDDQYSKEKMSGDLEKLNSWYLDRGYVDFSIDSTQVSISPDKRDMFISAGVTEGEQYKISEIKVTGDTVLPQADIERLVIPKAGDIFSRALLEYTSDAITNTLSNVGYAFAKVNPIPTPNREDRTVAVNLQVVPGPRVTVRRILYKGNSRTSDEVLRREMRQFENTWYSQAAIDRSKIRLQRLGYFESVDVETPAVPGSNDQVDVVYNVKETTSGSFVFGLGYSQSFGVTTSVQLSQNNFLGGGNRVAVEASRSSYQQRYAFSYTNPFFTDDGVSLGYNLSWRALDYSDFNTAQFNSKNGSAQVVFGVPITENDTVSAMVGIDSNQITTFAGTTPQAIIDYINAIGTRTFHAWRTELGWARDTRNDFFMPTRGMYQRVGLETTLPGSTVEYYKLNYQISNYWPIIPALVLNTRFELGYGDSYGKDSTRVLTNPDGSTRTVTATGLPFYENFYAGGTNSVRGFEDNTLGPRSEAINGFTRGQPLGGSFKTVGSVEMYFPKLFDSPSARVSAFVDFGNVYNGVDNFKANELRASTGVALLWRAPVGPISISYAFPLKKEDNDEIERLQFTFGGQF
>NZ_CP018467.1|WP_011346891.1|2933973_2935320_+|RIP-metalloprotease-RseP
MGDFIGSVWWMIVSLGVLVTFHEFGHFWVARRCGVKVLRFSVGFGKPLWMRRNRHGTEFVVAAIPLGGYVKMLDEREGDVHPAEQGQAFNRKTVWQRIAIVAAGPIANLLLCMAMLWAMFVVGKQDYSATIGRADGLAAEAGLGPGERIVRIDGRSVSSWSDASMQLTTAAMDRRDVRVLTASDAAGSSEHTLRLSQLPVGFDERRVAALAGIGWQFMLKPPVIAEVVKGSVADGLLKPGDRIVAIDGQPIRSAEDIIPQVQALGAHGGPGMIEVARGEDRLALEIAPRKSPQGQWMIGVRPAAAPAPEYDSRQQYGLFAAVPAAIRETGRMTADSLGMMKRMLTGQASVKNISGPVTIARAANASAERGLDWFLYFLGLLSLSLAIINLMPIPILDGGHLLYYLIELIKGSPISERAMIAGQYVGLAVLAGLMGLAFYNDILGLVPR
>NZ_CP018467.1|WP_011346892.1|2932756_2933947_+|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MAGSSLRQVAVFGATGSIGASALDVIARHPERLRASLLSAGSKVDELLALCATHRPAHAVIADAALYPALRDGLRALGLATQAHAGAEALDALASGDVCDTVVAAIVGAAGLPSTLAAARAGKRLLLANKESLVLAGELLTRTAAAAGAEIIPIDSEHSAIFQCLRSCDASRGVRRVILTASGGPFRGRDRAALAAVTPAQAVAHPKWSMGPKISVDSATMMNKGLEVIEAHHLFGLPGEQIDVLVHPQSLVHSLVEFVDGSTLAQLGLPDMRTTLAVGLAWPERVDSGVGGLDLLRQGRLDFEAPDTAAFPCLRLAWDALRAGGTAPAILNAANEVAVSAFLQGQVGFLAIPALVEHTLTTLPRHNADSLDTLLFADAQARQITERALAHHALHA
>NZ_CP018467.1|WP_011346893.1|2931926_2932754_+|phosphatidate-cytidylyltransferase
MTKTRVIAALIMAPLAICAIVLLPTQWLAALAAVLFLTGLWEWLKLSGIDDSLPRTVLLTLNLLLMVLMVWASAGSMVLFQIASLVGVAWWLLALLWLRFFTFGADHGNGQARALKLAAGTLAVLPAWAALVLLHASPDKGNLWLLTALTMVWAADSGAYFAGRAFGKHKLAPRVSPNKTIEGLLGGLLAGIAVACAFGWLAGLTLAHVPQLVLVSALAVLASVLGDLFESLLKRHAGAKDSGTLIPGHGGVLDRIDGVLAALPVFALGKEILGF
>NZ_CP018467.1|WP_011346894.1|2931171_2931930_+|di-trans,poly-cis-decaprenylcistransferase
MHPVPSAAVPRHIAIIMDGNGRWAQRRRRPRMIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRPQDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRERMAGAERSTATNSRLVLSIAASYGGRQDIAAAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGGDTRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDFAGRERRFGLTSAQIADKATESSSA
>NZ_CP018467.1|WP_011346886.1|2942725_2946316_+|DNA-polymerase-III-subunit-alpha
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDMPALAVTDLNNLFALVKFYKAAEGVGIKPIAGADVMIATPDMTPWRMTLLCRDREGYLSLSRLLTRAWMEGHRPEGGVAIHPEWLQAGHANLFALAGRDSLAGRLFNEGRADLAEQQLADWQRVFGDGLHLELTRTGREGEERFNQFALHAAGVRGLPVVASNDVRFLYASDFNAHEARVCISSGRVLDDPKRPREYSDQQYMKSSEEMAALFADIPDAIDNTHALAQRCNIEMRLGTYFLPAYPVPEDETLDSWIRSQSRQGLAARLEKNPIAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQWGKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDAGRVLGFSYGLVDSVAKLIPNILGITLKDAMGEGKDSEMASPDLIQRYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPDPLSEFCPLFAEHDEDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARAGIDPVDITAIPLDDVPTYKGVFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLYRPGPMDLIPDFNARKHGQQEIVYPDPRTEVILKDTYGIMVYQEQVMQMAQIVGDYSLGGADLLRRAMGKKVPAEMAKHREIFREGAAKGGVSAAKADEIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEAASPDTIQYGLGAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTARLNRRTLEAMINAGAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSAPAMRLDLPESKEWPLGQLLTGERETLGFYLSGHPFDPHREEVRELVGCDLGALEKILASQQRGGGGGGGDGEKRAWRPEVSAILAGQVVGVRRKGDSQVFVQLEDGRGRVECSAFSDAMAEFGHLLTRDRILIVKGGLREDEFNDGYSLRIRQCWDYEQICADHAQRLSLRLDLREKHAFSRIDALLAKHRPGKTPLRLDLLLRAPSGGVAGMLDLNGTHSVRIDQQLMDSLRADPAVRTVKIKYSPPWA
>NZ_CP018467.1|WP_008578271.1|2946499_2947459_+|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha
MNPNYLDFEQPIADLEAKIQELRKASTGPAVNVETEVRALRDKLRVRTAQIFRDLSAWQVSQLARHPQRPYTLDYIDTICDEFQELAGDRAYADDKAIVGGLGRIDGRPVVIIGHQKGRDTKTKVARNFGMPRPEGYRKALRLMKLAERFRLPLLTFIDTPGAYPGIGAEERGQSEAIARNLLEMAELKIPVICTVIGEGGSGGALAIGVGDRTLMLEYGTYSVISPEGCASILWKDAAKAKDAAEQLGLTAKRLKGLGLVDKVIREPTGGAHRNPEQMGKRLKAVLLNELDALEKIPVDALLQQRYERLRSYGAYEGH
>NZ_CP018467.1|WP_011346885.1|2947516_2948272_+|tetratricopeptide-repeat-protein
MSPLLLISLLLQAACCVHVVRSGRPLYWIFLLLAFSLLAVLVYVCVAVIPDLRNDPNARRRLKRVRSTLDPQREQRDASRRLDVADTPENRRQLAETLLARGDYAQAAEHYQGALRGLYRDDPHLMLGLAKAQFGLGQPQQTRQTLDALIAANPSFRSHDGHLLYARAVEGSGDTEAALHEYETLAQGYPGEEARVRYAQLLQRIARNDQARAVYEQVLRHAAASPKHYQREQRAWVDLARKGLRELDTSA
>NZ_CP018467.1|WP_011346884.1|2948361_2948811_+|hypothetical-protein
MQRKPEIEAVLKAEIDHLLEQSTQRFRSGALAESLALGLQAWALIPEPKANWDYYPQSLSASFVKDYADLHDQENVHRWIEVMALMYDDPDHTDHLVLMTEGEAMLQLGDEARACAAFGKIHALYGKKGFAGHQKRYLEMLLKPHPTGA
>NZ_CP018467.1|WP_008578268.1|2949015_2949462_-|membrane-protein
MTLYLWIKTFHLLFVIAWMAAVFYLPRILVNIAEAGSDTAVRARLVLMGRRLYTFGHSMLGLALLLGAVLWQGYRVIPDFPTMVAGGWLHAKLFAVALILAHYIVSGRWVKGAEQGRAVPSGRALRWFNEAPVILLVGVIWLVLAKPF
>NZ_CP018467.1|WP_011346883.1|2949535_2950138_+|class-I-SAM-dependent-methyltransferase
MQQSAPKQYDAHYFRRWYRDAGLADPARLRRKVALAVAQAEYYLERPIRSVLDVGCGEAAWRAPLLALRPKLSYLGFDSSAYAVQRYGRSRQIHPARFGDFAWLRPCAPVDLLICSDVLHYVPTREFNQGLPGLAEMCAGVAFLEAFAEEDAFEGDHDGFQARPARWYRKRFASVGFAALGSHCWLSPQLADQASALERG
>NZ_CP018467.1|WP_033479580.1|2950447_2951755_+|polyhydroxyalkanoate-depolymerase
MLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEYEKPAWALDDVEVDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFRLEDYITYIQEFIRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLATENGIEWFQNNLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQFYDEYNAVLDMPAEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRNTALLSIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRWREVVYPQVREFIARYDADPVGSRDLATVTPIRKRGKRA
>NZ_CP018467.1|WP_011346882.1|2951883_2952801_-|membrane-protein
MNTIAQAHPLPTTIGDYLLQLRQALSGADPAMIQDALYDAEEYLRSELAEQQGKSEAEVIAGVASSYGAPEEVAEIYRETEVTVARALRPPVPPQRASWIGTFFGVAADPRTYGALFYMLLSLLTGVFYFTWVVTGASLSVGMLILIIGVPLLVLFFGSVRVLSLVEGRVVETLLGVRMPRRPQHPGLQGGWLQRIGAMFTDARTWSTMLYFLLMLPLGIVYFTVFCTLLSLSLGLAASPIAALFDQVAVLTWDGLDITSAWLTLPLFAVGVLLLFVTLHLARAFGKLHGMFAKQLLVRSGEAAA
>NZ_CP018467.1|WP_008578264.1|2952797_2953160_-|PadR-family-transcriptional-regulator
MSEPDIHLRKFQKELSAGTVSLALLAVLAQADAPLYGYLIAKRLERLEGVLSGKQSALYPVLRNLEGAGLLHSHVEPSASGPPRRYYRITDSGRDCLRDWTAAWRATRDSVDSVLEGTHS
>NZ_CP018467.1|WP_008578263.1|2953532_2955086_+|alginate-export-family-protein
MQMTRLAQPAMADTSFGATRRLCLAIGLALPGLGLAQVQPAPTNAEQAVAEPAKAPVTAAPATAKGYPLEAQGWGAKQGGNMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSLSNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKGRIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNGARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNYYGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWSLSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQTTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNIDPNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018467_2	2.1\|2125209\|25\|NZ_CP018467\|CRISPRCasFinder	2125209-2125233	25	NC_014842	Pantoea sp. At-9b plasmid pPAT9B05, complete sequence	45680-45704	5	0.8

1. spacer 2.1|2125209|25|NZ_CP018467|CRISPRCasFinder matches to NC_014842 (Pantoea sp. At-9b plasmid pPAT9B05, complete sequence) position: , mismatch: 5, identity: 0.8

ctctttacctgaaaccacggtaatt	CRISPR spacer
ttctttatctgaaaccacggtacgc	Protospacer
.******.**************  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

382048 : 390093

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011348612.1\|382048_383104_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	6.8e-82	48.3
WP_011348611.1\|383159_384047_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.6e-95	58.5
WP_011348610.1\|384043_384601_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.5e-43	47.8
WP_039416342.1\|384597_385500_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.2e-25	36.3
WP_008576953.1\|385840_387007_+	nucleotide sugar dehydrogenase	M1HV26	Paramecium_bursaria_Chlorella_virus	4.7e-116	57.6
WP_011348608.1\|387296_388700_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.5e-47	29.8
WP_011348607.1\|388746_390093_-	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.3e-32	27.1

DBSCAN-SWA_2

769241 : 807381

Leptospira_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087944903.1\|769241_770397_+\|transposase	IS3-like element ISXc8 family transposase	NA	NA	NA	NA
WP_011348380.1\|770541_770937_+	H-NS histone family protein	NA	NA	NA	NA
WP_039418395.1\|771390_772224_-	hypothetical protein	NA	NA	NA	NA
WP_011348378.1\|773036_774329_-	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|775843_776976_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_039418402.1\|777340_779404_-	hypothetical protein	NA	NA	NA	NA
WP_087944903.1\|780560_781717_-\|transposase	IS3-like element ISXc8 family transposase	NA	NA	NA	NA
WP_039418204.1\|784522_786070_+	histidine kinase	NA	NA	NA	NA
WP_016848927.1\|787091_787739_+	hypothetical protein	NA	NA	NA	NA
WP_011348365.1\|787770_788907_+	type IV secretion system protein	NA	NA	NA	NA
WP_011348364.1\|789832_790363_+	hypothetical protein	NA	NA	NA	NA
WP_039418198.1\|790428_791019_+	hypothetical protein	NA	NA	NA	NA
WP_039418196.1\|791015_792362_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_074038480.1\|793084_793603_+	DUF4189 domain-containing protein	NA	NA	NA	NA
WP_080755014.1\|793640_794171_+	DUF4189 domain-containing protein	NA	NA	NA	NA
WP_109298499.1\|794754_795192_-	DNA-binding domain-containing protein	NA	NA	NA	NA
WP_087942069.1\|796080_797213_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_087944903.1\|798264_799420_+\|transposase	IS3-like element ISXc8 family transposase	NA	NA	NA	NA
WP_011348361.1\|799444_800104_+	DUF1629 domain-containing protein	NA	NA	NA	NA
WP_011348360.1\|800136_804099_+	hypothetical protein	NA	NA	NA	NA
WP_011348359.1\|804138_804792_+	hypothetical protein	NA	NA	NA	NA
WP_074038482.1\|804765_805215_-	hypothetical protein	NA	NA	NA	NA
WP_011348358.1\|805396_805723_-	hypothetical protein	NA	NA	NA	NA
WP_100101058.1\|806279_807381_+\|transposase	IS3-like element IS1404 family transposase	S5WIU1	Leptospira_phage	4.5e-44	41.9

DBSCAN-SWA_3

1865661 : 1973000

Xanthomonas_phage(33.33%)

transposase,coat,integrase

attL 1856757:1856772|attR 1960491:1960508

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1856757:1856772	attL	NA	NA	NA	NA
WP_011347656.1\|1865661_1866864_+\|integrase	site-specific integrase	G9L697	Escherichia_phage	4.2e-120	54.2
1856757:1856772	attL	NA	NA	NA	NA
WP_011347655.1\|1866953_1867199_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_162013000.1\|1867302_1868313_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_041855061.1\|1868403_1868637_+	hypothetical protein	NA	NA	NA	NA
WP_011347653.1\|1868640_1869516_+	AAA family ATPase	NA	NA	NA	NA
WP_087944892.1\|1870149_1871306_-\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
WP_011347650.1\|1871383_1872127_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.7e-67	52.5
WP_039417963.1\|1873881_1874097_+	hypothetical protein	NA	NA	NA	NA
WP_164735753.1\|1874093_1874267_+	hypothetical protein	NA	NA	NA	NA
WP_164735752.1\|1874259_1874436_+	hypothetical protein	NA	NA	NA	NA
WP_039417961.1\|1874527_1875469_+	inovirus-type Gp2 protein	A0A077JDC0	Xanthomonas_phage	7.4e-181	99.0
WP_011347644.1\|1875465_1875762_+	hypothetical protein	A0A1W6DXU2	Xanthomonas_phage	3.5e-44	90.7
WP_033482066.1\|1875765_1876017_+	hypothetical protein	NA	NA	NA	NA
WP_005918131.1\|1876044_1876173_+\|coat	Phi-Lf prophage-derived major coat protein	NA	NA	NA	NA
WP_005918124.1\|1877049_1877289_+	hypothetical protein	Q9XJ91	Xanthomonas_phage	7.4e-37	97.5
WP_005918122.1\|1877423_1877744_+	filamentous phage phiLf protein VI	Q4LAU3	Stenotrophomonas_phage	1.2e-21	46.2
WP_039417956.1\|1877745_1879068_+	filamentous phage phiLf protein I	Q4LAU4	Stenotrophomonas_phage	3.8e-130	55.5
WP_005918116.1\|1879097_1879490_+	hypothetical protein	A0A077JCA3	Xanthomonas_phage	2.3e-19	46.2
WP_029219918.1\|1879528_1879867_-	hypothetical protein	Q38057	Xanthomonas_phage	1.3e-50	84.8
WP_046934907.1\|1880420_1880681_+	hypothetical protein	NA	NA	NA	NA
WP_046934906.1\|1881087_1881927_+	adhesin	A0A1D6ZIT9	Xanthomonas_phage	3.3e-23	40.1
WP_046934905.1\|1881923_1882241_+	hypothetical protein	NA	NA	NA	NA
WP_046934904.1\|1882473_1882740_+	hypothetical protein	NA	NA	NA	NA
WP_129111544.1\|1882899_1884249_+	hypothetical protein	Q9XJ91	Xanthomonas_phage	3.0e-13	35.9
WP_046934903.1\|1884248_1884533_+	DUF2523 domain-containing protein	NA	NA	NA	NA
WP_074038539.1\|1884534_1885620_+	hypothetical protein	B1NI81	Stenotrophomonas_phage	2.4e-42	33.2
WP_074038540.1\|1885513_1885945_-	hypothetical protein	S0F314	Stenotrophomonas_phage	1.8e-20	60.4
WP_164973624.1\|1886078_1886252_+	hypothetical protein	NA	NA	NA	NA
WP_164973625.1\|1886244_1886397_+	hypothetical protein	NA	NA	NA	NA
WP_074038541.1\|1886393_1887464_+	replication protein	S0F3F7	Stenotrophomonas_phage	2.7e-62	40.9
WP_046935691.1\|1887572_1887845_+	hypothetical protein	NA	NA	NA	NA
WP_074038543.1\|1888083_1888311_+	hypothetical protein	NA	NA	NA	NA
WP_164973626.1\|1888995_1889904_+	hypothetical protein	B1NI80	Stenotrophomonas_phage	3.4e-66	59.1
WP_046935694.1\|1889911_1890196_+	DUF2523 domain-containing protein	NA	NA	NA	NA
WP_074038545.1\|1890195_1891338_+	zonular occludens toxin	B1NI81	Stenotrophomonas_phage	4.9e-126	57.3
WP_074038546.1\|1891485_1891761_+	hypothetical protein	A0A1W6DXU7	Xanthomonas_phage	1.9e-07	41.6
WP_074038787.1\|1891923_1892313_-	hypothetical protein	A0A077JDD0	Xanthomonas_phage	7.4e-42	66.2
WP_087942069.1\|1892434_1893566_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_039417975.1\|1893661_1894483_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_011347626.1\|1894594_1895620_+	alpha/beta hydrolase	A0A2P1EM31	Moumouvirus	3.2e-52	37.5
WP_033479010.1\|1896170_1896479_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011347623.1\|1896733_1897600_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_008575717.1\|1897596_1898037_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_008575716.1\|1898033_1898465_+	membrane protein	NA	NA	NA	NA
WP_008575714.1\|1898461_1898902_+	TIGR01244 family phosphatase	NA	NA	NA	NA
WP_155405766.1\|1899752_1899989_+	hypothetical protein	NA	NA	NA	NA
WP_011347621.1\|1900027_1901305_-	lytic murein transglycosylase	NA	NA	NA	NA
WP_011347620.1\|1901437_1904428_-\|transposase	Tn3-like element TnXax1 family transposase	A0A1B0V7H9	Salmonella_phage	7.6e-86	27.4
WP_011347619.1\|1904435_1905710_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_011347618.1\|1905894_1906950_+	DNA-binding protein	NA	NA	NA	NA
WP_011347617.1\|1907125_1908088_-\|transposase	IS1595-like element IS1595 family transposase	NA	NA	NA	NA
WP_046935566.1\|1909434_1910982_+	HAD hydrolase-like protein	NA	NA	NA	NA
WP_011347614.1\|1912001_1915127_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
1912743:1912758	attR	NA	NA	NA	NA
WP_011347613.1\|1915178_1916291_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
1912743:1912758	attR	NA	NA	NA	NA
WP_011347612.1\|1916414_1916984_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011347611.1\|1917278_1919105_-	hypothetical protein	NA	NA	NA	NA
WP_008575672.1\|1919118_1919718_-	NfuA family Fe-S biogenesis protein	NA	NA	NA	NA
WP_011347610.1\|1919806_1920163_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_011347609.1\|1920159_1920582_+	energy transducer TonB	NA	NA	NA	NA
WP_005921249.1\|1920846_1921665_+	zinc transporter ZupT	NA	NA	NA	NA
WP_011347608.1\|1921962_1923780_+	DUF3300 domain-containing protein	NA	NA	NA	NA
WP_011347607.1\|1923813_1924800_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_041855056.1\|1925209_1928851_+	Rne/Rng family ribonuclease	NA	NA	NA	NA
WP_003489223.1\|1929375_1930023_-	response regulator	NA	NA	NA	NA
WP_011347605.1\|1930262_1931009_-	sulfurtransferase	NA	NA	NA	NA
WP_008575660.1\|1931108_1931474_-	hypothetical protein	NA	NA	NA	NA
WP_039417968.1\|1931533_1931965_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_011347603.1\|1931975_1933238_+	TIGR03862 family flavoprotein	NA	NA	NA	NA
WP_011347602.1\|1933221_1934514_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA
WP_087944892.1\|1936141_1937298_-\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
WP_011347493.1\|1937414_1937675_+	hypothetical protein	NA	NA	NA	NA
WP_011347492.1\|1937667_1939311_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_011347491.1\|1939326_1939887_+	DUF2857 domain-containing protein	NA	NA	NA	NA
WP_011347490.1\|1939890_1941117_+	hypothetical protein	NA	NA	NA	NA
WP_011347489.1\|1941438_1942194_+	TIGR03761 family integrating conjugative element protein	NA	NA	NA	NA
WP_011347488.1\|1942190_1942724_+	DUF3158 family protein	NA	NA	NA	NA
WP_011347487.1\|1942797_1943238_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_011347486.1\|1943517_1945530_+	DNA topoisomerase III	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	5.8e-13	23.6
WP_011347485.1\|1946064_1947603_+	DNA cytosine methyltransferase	A0A1B0V7P0	Salmonella_phage	1.7e-94	40.0
WP_011347484.1\|1948075_1948288_+	hypothetical protein	NA	NA	NA	NA
WP_011347483.1\|1948309_1948702_+	hypothetical protein	NA	NA	NA	NA
WP_011347482.1\|1948942_1951069_+	hypothetical protein	NA	NA	NA	NA
WP_011347481.1\|1951068_1951995_+	hypothetical protein	NA	NA	NA	NA
WP_011347479.1\|1952308_1953385_-	hypothetical protein	NA	NA	NA	NA
WP_074038790.1\|1953518_1954049_-\|integrase	integrase	NA	NA	NA	NA
WP_011347477.1\|1954707_1956030_+	pectate lyase	NA	NA	NA	NA
WP_011345701.1\|1957464_1958532_-	cointegrate resolution protein T	NA	NA	NA	NA
WP_011347474.1\|1958725_1960000_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_011347473.1\|1960008_1963005_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.4e-84	27.8
WP_011347472.1\|1963142_1963769_-	hypothetical protein	NA	NA	NA	NA
WP_011347471.1\|1964906_1965836_+	DUF3577 domain-containing protein	NA	NA	NA	NA
WP_011347470.1\|1965897_1966578_+	DUF3275 family protein	NA	NA	NA	NA
WP_100101058.1\|1967012_1968114_+\|transposase	IS3-like element IS1404 family transposase	S5WIU1	Leptospira_phage	4.5e-44	41.9
WP_011347468.1\|1968326_1968977_+	hypothetical protein	NA	NA	NA	NA
WP_011347467.1\|1969040_1970150_+	O-methyltransferase	NA	NA	NA	NA
WP_011347466.1\|1970198_1970519_+	hypothetical protein	NA	NA	NA	NA
WP_011347465.1\|1970607_1970913_+	hypothetical protein	NA	NA	NA	NA
WP_087944903.1\|1971844_1973000_+\|transposase	IS3-like element ISXc8 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

2448819 : 2507137

Leptospira_phage(54.55%)

integrase,tRNA,protease,transposase

attL 2457877:2457936|attR 2505975:2507199

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011347182.1\|2448819_2450268_-\|tRNA	histidine--tRNA ligase	A0A2K9L6G5	Tupanvirus	5.7e-39	26.9
WP_162012999.1\|2450513_2451137_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011347180.1\|2451222_2451966_-	murein L,D-transpeptidase catalytic domain family protein	NA	NA	NA	NA
WP_011347179.1\|2452067_2453372_-	threonine synthase	NA	NA	NA	NA
WP_039419324.1\|2453533_2453848_+	EthD family reductase	NA	NA	NA	NA
WP_011347177.1\|2453922_2454936_-	homoserine kinase	NA	NA	NA	NA
WP_011347176.1\|2454932_2457440_-	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA
2457877:2457936	attL	NA	NA	NA	NA
WP_087942069.1\|2457905_2459038_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
2457877:2457936	attL	NA	NA	NA	NA
WP_039419023.1\|2463088_2463433_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_046934926.1\|2463482_2463788_-	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|2463911_2465044_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_039416277.1\|2479472_2481173_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_011347170.1\|2481954_2482878_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_039416281.1\|2483009_2483384_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
WP_039416317.1\|2484016_2484568_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_011347166.1\|2485490_2485847_-	hypothetical protein	NA	NA	NA	NA
WP_039416283.1\|2486022_2486358_+	hypothetical protein	NA	NA	NA	NA
WP_011347164.1\|2486588_2487146_-	hypothetical protein	NA	NA	NA	NA
WP_087944180.1\|2487620_2488728_+\|transposase	IS3-like element ISXca2 family transposase	S5WIU1	Leptospira_phage	5.9e-44	38.3
WP_157860891.1\|2488725_2489730_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	8.6e-42	37.5
WP_005916811.1\|2490581_2492039_+\|integrase	site-specific integrase	A0A0A0YR56	Pseudomonas_phage	3.9e-11	24.8
WP_087944180.1\|2492304_2493412_+\|transposase	IS3-like element ISXca2 family transposase	S5WIU1	Leptospira_phage	5.9e-44	38.3
WP_126952920.1\|2493471_2493903_-	hypothetical protein	NA	NA	NA	NA
WP_087944892.1\|2494090_2495247_-\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
WP_087942069.1\|2495382_2496515_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_014089904.1\|2496732_2497233_-	hypothetical protein	NA	NA	NA	NA
2495354:2496579	attR	NA	NA	NA	NA
WP_016851041.1\|2497264_2498389_-	DUF4062 domain-containing protein	NA	NA	NA	NA
2495354:2496579	attR	NA	NA	NA	NA
WP_016851042.1\|2498469_2498916_-	hypothetical protein	NA	NA	NA	NA
WP_074038566.1\|2499427_2500819_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_087944892.1\|2501072_2502228_+\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
WP_155270882.1\|2502374_2502878_-	hypothetical protein	NA	NA	NA	NA
WP_011269864.1\|2503590_2504319_-	TatD family hydrolase	NA	NA	NA	NA
WP_005916297.1\|2505597_2505888_-	hypothetical protein	NA	NA	NA	NA
WP_087944892.1\|2505980_2507137_-\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
2505975:2507199	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2584738 : 2595509

uncultured_Caudovirales_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029819220.1\|2584738_2586697_-	PAS domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-12	42.9
WP_003481884.1\|2588011_2588224_-	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	1.3e-13	76.5
WP_011347112.1\|2588363_2591012_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	4.8e-84	39.8
WP_011347111.1\|2591113_2591602_-	recombination regulator RecX	NA	NA	NA	NA
WP_008574635.1\|2591898_2592933_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.1e-113	61.0
WP_011347110.1\|2593105_2593747_-	transcriptional repressor LexA	A0A1W6JNS2	Morganella_phage	2.4e-13	40.2
WP_011347109.1\|2593832_2595509_-	2-polyprenylphenol 6-hydroxylase	G8DDN0	Micromonas_pusilla_virus	1.9e-41	29.7

DBSCAN-SWA_6

3262833 : 3397823

113

Bacillus_phage(19.23%)

integrase,protease,transposase

attL 3307854:3307913|attR 3356383:3356404

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011346659.1\|3262833_3263298_-\|transposase	transposase	NA	NA	NA	NA
WP_008578171.1\|3263546_3264410_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_011346658.1\|3264409_3265537_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_008578169.1\|3266216_3266603_-	response regulator	W8CYM9	Bacillus_phage	5.6e-10	31.8
WP_011346657.1\|3267100_3268000_-	DnaJ domain-containing protein	A0A2L0UZR4	Agrobacterium_phage	3.5e-18	27.7
WP_008571577.1\|3268413_3268890_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_008571580.1\|3269574_3270135_+	bacterioferritin	NA	NA	NA	NA
WP_161797463.1\|3270483_3272874_-	penicillin-binding protein 1C	NA	NA	NA	NA
WP_039416304.1\|3273294_3274242_-	glycerophosphodiester phosphodiesterase family protein	A0A0S2MYI4	Enterococcus_phage	1.7e-07	36.8
WP_011346651.1\|3274384_3277387_-	TonB-dependent receptor	NA	NA	NA	NA
WP_039416300.1\|3277712_3282635_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA
WP_039416298.1\|3283131_3284136_-	nucleoside hydrolase	NA	NA	NA	NA
WP_011346647.1\|3284213_3286430_-	TonB-dependent receptor	NA	NA	NA	NA
WP_011346646.1\|3286945_3288145_-	2-methylaconitate cis-trans isomerase PrpF	NA	NA	NA	NA
WP_011346645.1\|3288258_3288816_-	hypothetical protein	NA	NA	NA	NA
WP_011346644.1\|3288825_3291420_-	Fe/S-dependent 2-methylisocitrate dehydratase AcnD	NA	NA	NA	NA
WP_011346643.1\|3291572_3292727_-	2-methylcitrate synthase	NA	NA	NA	NA
WP_011346642.1\|3292801_3293698_-	methylisocitrate lyase	NA	NA	NA	NA
WP_039416325.1\|3293826_3295446_+	propionate catabolism operon regulatory protein PrpR	NA	NA	NA	NA
WP_008571594.1\|3295674_3296001_-	hypothetical protein	NA	NA	NA	NA
WP_127172276.1\|3296204_3296426_-	hypothetical protein	NA	NA	NA	NA
WP_003483889.1\|3297082_3297436_-	type IV fimbriae assembly protein	NA	NA	NA	NA
WP_011346639.1\|3297432_3298392_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
WP_039416293.1\|3298388_3299462_-	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_011346637.1\|3299522_3300878_-	aminodeoxychorismate synthase component I	NA	NA	NA	NA
WP_011346636.1\|3301045_3302281_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_002814322.1\|3302422_3302662_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	5.9e-10	44.6
WP_008571604.1\|3302866_3303610_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	6.2e-13	29.7
WP_011346635.1\|3303692_3304637_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_011346634.1\|3304925_3305366_-	MEKHLA domain-containing protein	NA	NA	NA	NA
WP_011346633.1\|3305613_3306591_-	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_003483870.1\|3306681_3306876_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_039416288.1\|3306973_3307492_-	characterized ACR protein	NA	NA	NA	NA
3307854:3307913	attL	NA	NA	NA	NA
WP_087944180.1\|3307871_3308980_-\|transposase	IS3-like element ISXca2 family transposase	S5WIU1	Leptospira_phage	5.9e-44	38.3
3307854:3307913	attL	NA	NA	NA	NA
WP_011346629.1\|3309496_3310852_-	hypothetical protein	NA	NA	NA	NA
WP_041855030.1\|3310964_3312803_-	membrane protein	NA	NA	NA	NA
WP_031421433.1\|3312840_3313794_+	MoxR family ATPase	NA	NA	NA	NA
WP_011346626.1\|3313798_3314755_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_011346625.1\|3314747_3316700_+	DUF3488 domain-containing transglutaminase family protein	NA	NA	NA	NA
WP_011346624.1\|3316696_3317230_+	Slp family lipoprotein	NA	NA	NA	NA
WP_008571618.1\|3317347_3317698_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_011346623.1\|3317798_3318392_-	recombination protein RecR	NA	NA	NA	NA
WP_011346622.1\|3318489_3318810_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_011346621.1\|3318816_3320868_-	DNA polymerase III subunit gamma/tau	E7DN81	Pneumococcus_phage	1.8e-46	41.0
WP_011346620.1\|3321182_3322700_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_011346619.1\|3322845_3323526_+	hypothetical protein	NA	NA	NA	NA
WP_011346618.1\|3323682_3324024_+	hypothetical protein	NA	NA	NA	NA
WP_011346617.1\|3324076_3325678_-	MobA/MobL family protein	NA	NA	NA	NA
WP_011346616.1\|3325942_3326197_+	hypothetical protein	NA	NA	NA	NA
WP_011346615.1\|3326345_3327209_-	excinuclease Cho	NA	NA	NA	NA
WP_087944892.1\|3328126_3329283_-\|transposase	IS3-like element ISXc8 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-39	37.5
WP_039417682.1\|3330214_3330841_-	hypothetical protein	NA	NA	NA	NA
WP_011346611.1\|3330994_3331474_-	DNA repair protein RadC	NA	NA	NA	NA
WP_087944180.1\|3331844_3332953_-\|transposase	IS3-like element ISXca2 family transposase	S5WIU1	Leptospira_phage	5.9e-44	38.3
WP_011346610.1\|3333026_3333341_+	hypothetical protein	NA	NA	NA	NA
3331827:3333027	attR	NA	NA	NA	NA
WP_046934847.1\|3333358_3333718_+	hypothetical protein	NA	NA	NA	NA
3331827:3333027	attR	NA	NA	NA	NA
WP_011346608.1\|3333930_3334830_+	site-specific DNA-methyltransferase	S4VTY0	Pandoravirus	1.6e-103	66.2
WP_157860897.1\|3334818_3335142_-	hypothetical protein	NA	NA	NA	NA
WP_074038609.1\|3335148_3335574_-	hypothetical protein	NA	NA	NA	NA
WP_039416583.1\|3336907_3337354_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
WP_008571288.1\|3337350_3337596_-	molybdopterin converting factor subunit 1	NA	NA	NA	NA
WP_011346606.1\|3337592_3338090_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
WP_011346605.1\|3338114_3338495_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_011346604.1\|3338491_3339523_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_011346603.1\|3339522_3340272_-	MBL fold metallo-hydrolase	A0A0A0RUN7	Bacillus_phage	1.9e-09	26.0
WP_011346602.1\|3340271_3341021_-	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA
WP_039416578.1\|3341041_3342091_+	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_011346600.1\|3342302_3342707_-	hypothetical protein	A0A1C9C5K8	Heterosigma_akashiwo_virus	1.1e-16	35.9
WP_074038610.1\|3343091_3343427_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011346598.1\|3343555_3344305_+	hypothetical protein	NA	NA	NA	NA
WP_074038611.1\|3344316_3344712_+	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|3345894_3347027_-\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_129111547.1\|3347265_3347811_+	hypothetical protein	NA	NA	NA	NA
WP_087942069.1\|3347844_3348976_+\|transposase	IS3-like element IS476 family transposase	S5WIU1	Leptospira_phage	3.8e-54	44.1
WP_082332074.1\|3349041_3350193_+	N-6 DNA methylase	A0A1W6JNK1	Staphylococcus_phage	8.3e-49	35.7
WP_126958835.1\|3350179_3350689_+	hypothetical protein	NA	NA	NA	NA
WP_011346595.1\|3350799_3351153_-	conjugal transfer protein TraD	NA	NA	NA	NA
WP_109298543.1\|3351399_3353379_+	MobA/MobL family protein	NA	NA	NA	NA
WP_109298542.1\|3353394_3354696_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_011346592.1\|3355252_3355957_+	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_008571573.1\|3355998_3356733_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	2.3e-36	40.9
WP_011346591.1\|3356741_3357194_-	ribonuclease HI	A0A1Q2U2R0	Vibrio_phage	2.8e-40	55.4
WP_011346590.1\|3357221_3357878_-	hypothetical protein	NA	NA	NA	NA
WP_011346589.1\|3357890_3358658_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_011346588.1\|3358654_3359833_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_011346587.1\|3360495_3362466_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_011346586.1\|3363105_3363378_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.7e-21	64.0
WP_011346585.1\|3363591_3366063_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.8e-224	52.2
WP_003483788.1\|3366207_3367494_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.3e-137	59.9
WP_002806026.1\|3367619_3368246_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.0e-56	57.4
WP_005913863.1\|3368338_3369631_-	trigger factor	NA	NA	NA	NA
WP_011346584.1\|3370165_3371434_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_008575005.1\|3372451_3373213_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_008575004.1\|3373346_3374354_-	isocitrate dehydrogenase	NA	NA	NA	NA
WP_008575003.1\|3374580_3374976_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_017158114.1\|3374972_3375281_-	glutaredoxin 3	A0A2L0UZG6	Agrobacterium_phage	2.1e-07	43.2
WP_039416586.1\|3375430_3377077_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_003483753.1\|3377259_3377949_+	phosphate regulon transcriptional regulatory protein PhoB	W8CYM9	Bacillus_phage	1.0e-33	35.7
WP_011346580.1\|3378022_3379351_+	phosphate regulon sensor histidine kinase PhoR	W8CYF6	Bacillus_phage	6.4e-29	33.3
WP_011346579.1\|3379463_3381566_+	polyphosphate kinase 1	NA	NA	NA	NA
WP_011346578.1\|3381738_3383265_+	exopolyphosphatase	NA	NA	NA	NA
WP_011346577.1\|3383488_3384625_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_011346576.1\|3384605_3385148_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_008571623.1\|3385663_3386407_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_011346574.1\|3386589_3387009_-	hypothetical protein	NA	NA	NA	NA
WP_011346573.1\|3387143_3388397_-	peptidase	NA	NA	NA	NA
WP_039416388.1\|3388967_3389813_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_008571628.1\|3389987_3391454_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.4e-85	39.9
WP_008571630.1\|3391484_3392231_-	CvpA family protein	NA	NA	NA	NA
WP_011346570.1\|3392444_3393512_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_011346569.1\|3393579_3394878_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_008571633.1\|3395207_3395852_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_011345631.1\|3396842_3397823_-\|transposase	IS5-like element IS1646 family transposase	A0A077K814	Ralstonia_phage	7.4e-99	61.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018464

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018467

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection