CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018759	Pseudomonas psychrotolerans strain PRS08-11306 plasmid pPRS08-11306, complete sequence	0 crisprs	NA	0	0	6	0
NZ_CP018758	Pseudomonas psychrotolerans strain PRS08-11306 chromosome, complete genome	9 crisprs	DEDDh,csa3,cas3,WYL,RT,DinG	0	4	6	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 20091

Pseudomonas_phage(22.22%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157772855.1\|1031_1238_-	hypothetical protein	NA	NA	NA	NA
WP_074529896.1\|1441_1648_+	hypothetical protein	NA	NA	NA	NA
WP_074529897.1\|2086_2290_+	hypothetical protein	NA	NA	NA	NA
WP_074529898.1\|2538_2769_+	hypothetical protein	A0A0U1VYM8	Pseudomonas_phage	9.4e-13	62.7
WP_157772856.1\|3766_4165_+	hypothetical protein	NA	NA	NA	NA
WP_074529900.1\|4161_4428_+	hypothetical protein	NA	NA	NA	NA
WP_074529901.1\|4424_4799_+	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	2.7e-33	50.4
WP_081375648.1\|4821_5142_+	DUF2786 domain-containing protein	A0A2H4JCP9	uncultured_Caudovirales_phage	1.6e-05	44.6
WP_157772857.1\|5117_5585_+	hypothetical protein	NA	NA	NA	NA
WP_074529902.1\|5581_6055_+	hypothetical protein	NA	NA	NA	NA
WP_074529903.1\|6044_6512_+	hypothetical protein	H2BD44	Pseudomonas_phage	9.2e-15	37.4
WP_157772858.1\|6555_6843_+	hypothetical protein	NA	NA	NA	NA
WP_074529905.1\|6839_7238_+	hypothetical protein	NA	NA	NA	NA
WP_074529906.1\|7347_7584_+	hypothetical protein	NA	NA	NA	NA
WP_157772859.1\|7605_7770_+	hypothetical protein	NA	NA	NA	NA
WP_074529907.1\|7766_8264_+	hypothetical protein	NA	NA	NA	NA
WP_081375650.1\|8291_9317_+	thymidylate synthase	A0A142IIU2	Enterobacteria_phage	6.2e-56	38.0
WP_074529908.1\|9412_9766_+	hypothetical protein	NA	NA	NA	NA
WP_074529909.1\|9758_10031_+	hypothetical protein	NA	NA	NA	NA
WP_074529910.1\|10036_10768_+	hypothetical protein	NA	NA	NA	NA
WP_157772860.1\|10764_11199_+	hypothetical protein	A0A097PAL3	Delftia_phage	2.2e-23	71.2
WP_074529911.1\|11158_11434_+	hypothetical protein	NA	NA	NA	NA
WP_074529912.1\|11535_11853_+	hypothetical protein	NA	NA	NA	NA
WP_074529913.1\|11862_12432_+	hypothetical protein	NA	NA	NA	NA
WP_157772861.1\|12462_13410_+	hypothetical protein	K7PKM7	Enterobacterial_phage	1.8e-12	24.3
WP_074529915.1\|13488_13695_+	hypothetical protein	NA	NA	NA	NA
WP_157772862.1\|13835_13973_+	hypothetical protein	NA	NA	NA	NA
WP_074529916.1\|13965_15516_+	hypothetical protein	Q71T61	Escherichia_phage	2.4e-67	33.4
WP_074529917.1\|15578_15800_+	hypothetical protein	NA	NA	NA	NA
WP_074529918.1\|15796_16210_+	hypothetical protein	NA	NA	NA	NA
WP_074529919.1\|16243_16540_+	hypothetical protein	NA	NA	NA	NA
WP_074529920.1\|16539_17559_+	hypothetical protein	NA	NA	NA	NA
WP_074529921.1\|17632_17908_+	hypothetical protein	NA	NA	NA	NA
WP_074529922.1\|17910_18393_+	hypothetical protein	NA	NA	NA	NA
WP_157772863.1\|18471_20091_+	hypothetical protein	A0A222YXQ7	Escherichia_phage	7.6e-40	28.0

DBSCAN-SWA_2

25921 : 32336

Pseudomonas_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074529929.1\|25921_27259_+	SGNH/GDSL hydrolase family protein	A0A059VA35	Pseudomonas_phage	6.1e-19	26.0
WP_157772865.1\|27361_29620_+	hypothetical protein	Q7Y5J1	Xanthomonas_virus	9.3e-28	33.6
WP_074529931.1\|29633_30530_+	hypothetical protein	A0A1L2BYA7	Clostridium_phage	4.7e-15	26.7
WP_074529932.1\|31127_31814_+	hypothetical protein	A0A2H4P873	Pseudomonas_phage	1.4e-06	31.7
WP_074529933.1\|31817_32336_+	hypothetical protein	A0A077K8R9	Ralstonia_phage	3.9e-30	46.5

DBSCAN-SWA_3

36102 : 47950

Pseudomonas_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074529939.1\|36102_37179_+	hypothetical protein	A0A0S0N716	Pseudomonas_phage	2.7e-62	40.2
WP_157772866.1\|37175_37352_+	hypothetical protein	NA	NA	NA	NA
WP_074529940.1\|37355_37628_+	hypothetical protein	NA	NA	NA	NA
WP_157772867.1\|37689_39507_+	hypothetical protein	M4M9L8	Vibrio_phage	1.7e-35	49.0
WP_074529942.1\|39792_42333_+	hypothetical protein	V5UQK6	Shigella_phage	1.2e-20	29.1
WP_074529943.1\|42325_44188_+	hypothetical protein	G9BWI3	Planktothrix_phage	1.0e-08	33.3
WP_074529944.1\|44184_44511_+	hypothetical protein	NA	NA	NA	NA
WP_074529945.1\|44503_47950_+	methyltransferase domain-containing protein	A8HNV9	Thalassomonas_phage	1.5e-53	39.0

DBSCAN-SWA_4

57981 : 59075

Bordetella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074529958.1\|57981_58296_+	hypothetical protein	A0A291LAU3	Bordetella_phage	3.0e-09	47.8
WP_157772869.1\|58292_59075_+	lytic murein transglycosylase	A0A291LA05	Bordetella_phage	2.3e-71	63.3

DBSCAN-SWA_5

66389 : 82163

Vibrio_phage(27.27%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074529976.1\|66389_67028_-	hypothetical protein	A0A2H4JC30	uncultured_Caudovirales_phage	3.3e-79	69.1
WP_074529977.1\|67082_67472_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_074529978.1\|67468_67705_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_074529979.1\|67942_68593_+	AAA family ATPase	D3JZ99	Mycobacterium_phage	4.4e-07	36.8
WP_074529980.1\|68589_68952_+	hypothetical protein	NA	NA	NA	NA
WP_074529981.1\|68961_69267_-	hypothetical protein	NA	NA	NA	NA
WP_074529982.1\|69269_69635_-	hypothetical protein	NA	NA	NA	NA
WP_074529983.1\|69631_70465_-	hypothetical protein	A0A059VJU4	Pseudomonas_phage	6.9e-05	39.1
WP_074529984.1\|70519_70729_-	hypothetical protein	NA	NA	NA	NA
WP_074529985.1\|70725_71973_-	recombination-associated protein RdgC	L7TP07	Pseudomonas_virus	2.7e-101	62.1
WP_074529986.1\|71962_72451_-	hypothetical protein	NA	NA	NA	NA
WP_074529987.1\|72462_73035_-	single-stranded DNA-binding protein	W6MWX5	Pseudomonas_phage	4.9e-50	79.2
WP_074529988.1\|73104_73950_-	hypothetical protein	NA	NA	NA	NA
WP_157772871.1\|73977_74610_-	hypothetical protein	A0A2K9V3J9	Faecalibacterium_phage	1.0e-16	34.3
WP_074529990.1\|74606_75617_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	4.4e-70	58.5
WP_074529992.1\|76989_77973_+	hypothetical protein	A0A1C9LVZ5	Vibrio_phage	1.4e-12	45.9
WP_157772872.1\|77923_78697_+	hypothetical protein	NA	NA	NA	NA
WP_074530027.1\|78720_79068_+	DUF968 domain-containing protein	NA	NA	NA	NA
WP_074529994.1\|79162_79459_+	hypothetical protein	NA	NA	NA	NA
WP_074530028.1\|79530_79932_+	dUTP diphosphatase	A0A2I7QLE0	Vibrio_phage	2.4e-27	49.6
WP_074529995.1\|79931_80954_+	hypothetical protein	NA	NA	NA	NA
WP_074530029.1\|81076_81418_+	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	3.1e-28	60.2
WP_074529996.1\|81414_81669_+	hypothetical protein	NA	NA	NA	NA
WP_074529997.1\|81692_82163_+	DUF1367 family protein	A0A2I7RQ46	Vibrio_phage	4.4e-17	36.5

DBSCAN-SWA_6

85862 : 109758

Pseudomonas_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074530002.1\|85862_86804_+	hypothetical protein	I6NV32	Burkholderia_virus	7.8e-29	36.8
WP_074530003.1\|86870_87122_+	hypothetical protein	A0A1W6JTA9	Pseudomonas_phage	5.3e-09	55.2
WP_074530004.1\|87231_87606_+	hypothetical protein	A0A0U1UNQ6	Pseudomonas_phage	2.5e-23	52.1
WP_074530005.1\|87602_88616_+	hypothetical protein	NA	NA	NA	NA
WP_074530006.1\|88612_89011_+	hypothetical protein	NA	NA	NA	NA
WP_074530007.1\|89003_89780_+	hypothetical protein	A0A0U4JEF1	Pseudomonas_phage	4.6e-11	47.4
WP_074530008.1\|89776_90139_+	hypothetical protein	NA	NA	NA	NA
WP_157772875.1\|90135_90441_+	hypothetical protein	A0A291LA57	Bordetella_phage	2.2e-17	53.8
WP_074530010.1\|90604_91303_+	hypothetical protein	H2BD37	Pseudomonas_phage	9.9e-21	52.9
WP_074530030.1\|91642_91873_+	hypothetical protein	Q9ZXM0	Pseudomonas_virus	2.6e-15	69.6
WP_074530012.1\|92084_92360_+	hypothetical protein	NA	NA	NA	NA
WP_074530031.1\|92422_92845_+	hypothetical protein	NA	NA	NA	NA
WP_074530013.1\|92841_93354_+	hypothetical protein	NA	NA	NA	NA
WP_074530014.1\|93350_95192_+	DEAD/DEAH box helicase	A0A2K8IBK8	Pseudomonas_phage	2.5e-220	65.4
WP_081375653.1\|95294_95972_+	hypothetical protein	I6WMX7	Pseudomonas_phage	2.2e-33	43.8
WP_074530015.1\|96024_96240_+	hypothetical protein	NA	NA	NA	NA
WP_074530016.1\|96326_96782_+	hypothetical protein	A0A223LH76	Erwinia_phage	1.7e-13	47.3
WP_074529898.1\|96778_97009_+	hypothetical protein	A0A0U1VYM8	Pseudomonas_phage	9.4e-13	62.7
WP_074530017.1\|97060_97597_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	J9Q7H7	Salmonella_phage	3.5e-26	48.0
WP_074530018.1\|97593_97983_+	DUF2493 domain-containing protein	A0A291L9X7	Bordetella_phage	1.8e-24	50.4
WP_157772856.1\|98008_98407_+	hypothetical protein	NA	NA	NA	NA
WP_074529900.1\|98403_98670_+	hypothetical protein	NA	NA	NA	NA
WP_074530019.1\|98666_99044_+	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	2.7e-33	52.0
WP_074530020.1\|99062_99827_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	3.1e-12	30.7
WP_074529902.1\|99823_100297_+	hypothetical protein	NA	NA	NA	NA
WP_074529903.1\|100286_100754_+	hypothetical protein	H2BD44	Pseudomonas_phage	9.2e-15	37.4
WP_157772858.1\|100797_101085_+	hypothetical protein	NA	NA	NA	NA
WP_074529905.1\|101081_101480_+	hypothetical protein	NA	NA	NA	NA
WP_074529906.1\|101589_101826_+	hypothetical protein	NA	NA	NA	NA
WP_157772859.1\|101847_102012_+	hypothetical protein	NA	NA	NA	NA
WP_074529907.1\|102008_102506_+	hypothetical protein	NA	NA	NA	NA
WP_081375650.1\|102533_103559_+	thymidylate synthase	A0A142IIU2	Enterobacteria_phage	6.2e-56	38.0
WP_074529908.1\|103654_104008_+	hypothetical protein	NA	NA	NA	NA
WP_074529909.1\|104000_104273_+	hypothetical protein	NA	NA	NA	NA
WP_074529910.1\|104278_105010_+	hypothetical protein	NA	NA	NA	NA
WP_157772860.1\|105006_105441_+	hypothetical protein	A0A097PAL3	Delftia_phage	2.2e-23	71.2
WP_074529911.1\|105400_105676_+	hypothetical protein	NA	NA	NA	NA
WP_074529912.1\|105777_106095_+	hypothetical protein	NA	NA	NA	NA
WP_074529913.1\|106104_106674_+	hypothetical protein	NA	NA	NA	NA
WP_157772861.1\|106704_107652_+	hypothetical protein	K7PKM7	Enterobacterial_phage	1.8e-12	24.3
WP_074529915.1\|107730_107937_+	hypothetical protein	NA	NA	NA	NA
WP_157772862.1\|108077_108215_+	hypothetical protein	NA	NA	NA	NA
WP_074529916.1\|108207_109758_+	hypothetical protein	Q71T61	Escherichia_phage	2.4e-67	33.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018758

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018758_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_1

1266177-1266345

Orphan

Consensus_repeat	Method
ACCTGAGTTCGGAATCCGAACTCAG	CRT
GAGTTCGGATTCCGAACTCAGTG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP018758_1

>merge|NZ_CP018758|1|1266177-1266345|CRT,CRISPRCasFinder
ACCTGAGTTCGGAATCCGAACTCAGGGCATGCACGCCCAGGAAAACCTGAGTTCGGATTCCGAACTCAGTGAAACAACCCTCCTTTCCTGTCCTTCGGACCAGAGTTCGGAATCCGAACTCAGTGGAAATCAGGAGGCGCCTGCCTTAGTTCGGAATCCGAACTCATAT

>NZ_CP018758|1|1|1266177-1266343|CRT
ACCTGAGTTCGGAATCCGAACTCAG	GGCATGCACGCCCAGGAAA
ACCTGAGTTCGGATTCCGAACTCAG	TGAAACAACCCTCCTTTCCTGTCCTTCGG
ACCAGAGTTCGGAATCCGAACTCAG	TGGAAATCAGGAGGCGCCT
GCCTTAGTTCGGAATCCGAACTCAT

>NZ_CP018758|1|1|1266181-1266345|CRISPRCasFinder
GAGTTCGGAATCCGAACTCAGGG	CATGCACGCCCAGGAAAACCT
GAGTTCGGATTCCGAACTCAGTG	AAACAACCCTCCTTTCCTGTCCTTCGGACCA
GAGTTCGGAATCCGAACTCAGTG	GAAATCAGGAGGCGCCTGCCT
TAGTTCGGAATCCGAACTCATAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_074528150.1\|1261275_1261701_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528157.1\|1266755_1267649_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528151.1\|1261697_1262444_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224808
NZ_CP018758.1\|WP_074528163.1\|1271596_1273567_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350677
NZ_CP018758.1\|WP_081375561.1\|1264783_1265512_+\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP018758.1\|WP_074528158.1\|1267767_1268568_+\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274771
NZ_CP018758.1\|WP_074528149.1\|1260950_1261274_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214499
NZ_CP018758.1\|WP_081375562.1\|1269144_1270041_+\|Rha-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378235
NZ_CP018758.1\|WP_074528153.1\|1262685_1262967_+\|Arc-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|367702
NZ_CP018758.1\|WP_074528162.1\|1271093_1271423_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528148.1\|1259389_1260769_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP018758.1\|WP_074528164.1\|1273670_1273904_+\|DUF3606-domain-containing-protein	unknown	unknown	gnl\|CDD\|371985
NZ_CP018758.1\|WP_074528154.1\|1262963_1264739_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|213858
NZ_CP018758.1\|WP_074528165.1\|1274006_1275182_+\|pilus-assembly-protein-PilL	unknown	unknown	gnl\|CDD\|163460
NZ_CP018758.1\|WP_074528147.1\|1258694_1259393_+\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NZ_CP018758.1\|WP_074528160.1\|1270098_1270557_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|169261
NZ_CP018758.1\|WP_074528159.1\|1268572_1269148_+\|DUF3158-family-protein	unknown	unknown	gnl\|CDD\|314329
NZ_CP018758.1\|WP_074528145.1\|1257068_1257929_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP018758.1\|WP_074528161.1\|1270804_1271011_+\|CrpP-family-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528152.1\|1262440_1262689_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_074528151.1\|1261697_1262444_+\|hypothetical-protein	gnl\|CDD\|224808	COG1896, COG1896, Predicted hydrolases of HD superfamily [General function prediction only].	0.00226526
NZ_CP018758.1\|WP_081375561.1\|1264783_1265512_+\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	3.71807e-40
NZ_CP018758.1\|WP_074528158.1\|1267767_1268568_+\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|274771	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	4.75915e-98
NZ_CP018758.1\|WP_074528149.1\|1260950_1261274_+\|hypothetical-protein	gnl\|CDD\|214499	smart00064, FYVE, Protein present in Fab1, YOTB, Vac1, and EEA1. The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the PHD finger and the RING finger. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. The FYVE finger functions in the membrane recruitment of cytosolic proteins by binding to phosphatidylinositol 3-phosphate (PI3P), which is prominent on endosomes. The R+HHC+XCG motif is critical for PI3P binding.	0.00897484
NZ_CP018758.1\|WP_081375562.1\|1269144_1270041_+\|Rha-family-transcriptional-regulator	gnl\|CDD\|378235	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha). Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that Rha is a phage regulatory protein.	9.23894e-37
NZ_CP018758.1\|WP_074528153.1\|1262685_1262967_+\|Arc-family-DNA-binding-protein	gnl\|CDD\|367702	pfam03869, Arc, Arc-like DNA binding domain. Arc repressor act by he cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognize bases in the major groove.	0.000273644
NZ_CP018758.1\|WP_074528163.1\|1271596_1273567_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|350677	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.58859e-39
NZ_CP018758.1\|WP_074528148.1\|1259389_1260769_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP018758.1\|WP_074528164.1\|1273670_1273904_+\|DUF3606-domain-containing-protein	gnl\|CDD\|371985	pfam12244, DUF3606, Protein of unknown function (DUF3606). This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.	7.90943e-15
NZ_CP018758.1\|WP_074528154.1\|1262963_1264739_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	2.61546e-132
NZ_CP018758.1\|WP_074528147.1\|1258694_1259393_+\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	2.13181e-07
NZ_CP018758.1\|WP_074528160.1\|1270098_1270557_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|169261	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional.	1.65368e-62
NZ_CP018758.1\|WP_074528159.1\|1268572_1269148_+\|DUF3158-family-protein	gnl\|CDD\|314329	pfam11358, DUF3158, Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	4.15207e-65
NZ_CP018758.1\|WP_074528145.1\|1257068_1257929_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	9.7265e-35
NZ_CP018758.1\|WP_074528165.1\|1274006_1275182_+\|pilus-assembly-protein-PilL	gnl\|CDD\|163460	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family. This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions].	2.83453e-52

>NZ_CP018758.1|WP_081375561.1|1264783_1265512_+|DUF2857-domain-containing-protein
MSSKYSPMNQALLDQILHQMRHGQVARCLDLGLDVEVLNQMNQPHAYSILKNAPVRWCRVEVDVEMIKQLLENCERDEREQRLIHRALRLGATNGMIRTFFGLSPSEISLLRQLFDAPGRSGRMAGVDDTDQIWYRFNDLMKQHDVEHTDALSVLDICMLITEELNGPQEEVDNKVTVAFIWNLVQTWINEGIYPPKAARAPLFLISDASRQRHRPGNTPSLTPALEGQQSQDLDHAEGDHL
>NZ_CP018758.1|WP_074528154.1|1262963_1264739_+|ParB-N-terminal-domain-containing-protein
MSKPTNEAVANRLLAGGFAPPSNQLARLADPIKETPMLLTLDQLSPYDNNPRKTRNPSYDDIKASILARGLDQPPPVTRRPGEDKYIISSGGNTRLAILTELWLETREERFFRINCLFRPWSDRGEIVALTGHLAENDMRGNLMFIERAVSIDQARQLYVEQLGKDISQRELARLLKEDGYSISNSHISRMQETLRTLVPAIPALLYSGLGKPQVEKLLTLRSSALNAWIKFKGTEDDFEWLYQEVLNGFDGPTENFVYESVEDALIGRIGKVLQVDYEHVLKAVLDHQKSSRRAQLVGMPIEDGRAPEIPPSTVTLPGTTKPTPPDVDPAPSSRQRTSGQQEKPATDAPPHQLPQTPQQTGTVAIDPTQPKSGSEPPVLLTPPDPESLTQVELAARLDGHIVTPDGIGPKVREVQRQIAAESGEILRDFNSDALRAIPVQAGGLHPVSDLWYIERVLDNPEDLRRALQALAFEVAELSDVPGDLLYPSELALGCTLKSPQAPLSERGQCAWQLLQALYGMYGYVKSRDPNLDLTDANATLALALGRLLIGDPLFDNRPASTEGRMTDAALVKLFRMIRLARRLIELEAGQ
>NZ_CP018758.1|WP_074528153.1|1262685_1262967_+|Arc-family-DNA-binding-protein
MKAVPKRKPRQKRTDTETQSFQLRLPMGMRARIDAAAKDAHRSMNSEIVDRLERTFQLQTELRRLYQVIDHLLAATDQPSQRPLLQAVGERRA
>NZ_CP018758.1|WP_074528152.1|1262440_1262689_+|hypothetical-protein
MSTSTPSLSPRDIGKKHLRALVAFALGEGWVVTRTQGGHLRFTKTGYAPIFTSSTPSDHRAGRNARAQLRRAQSSNEVDQTL
>NZ_CP018758.1|WP_074528151.1|1261697_1262444_+|hypothetical-protein
MSWILTATGQRLDLTGSTANDIDPLDLARGLSRACRFVGQTTDFYSVAQHSVLASYHVPPEDALPALLHDAAEAYLGDLTGPLKRLLVSYHEALLTSAAEVAGMERARFIELLSLRLPMNWTAPHTSLCMGVHADRPFYHQLEQHLFGLIAERFGISATLPDSVKVVDTRLMFTERLILMPGDDEPWYGQEGIEPLPILIDPWSAEVAEQQFLQRLADLTEPPPGAGSLMRQPIQDVGRMVAGQEDCA
>NZ_CP018758.1|WP_074528150.1|1261275_1261701_+|hypothetical-protein
MLPFQSSEIEAPFVDQTTRARDREMLERALADFEAKGGKVQIVDTTKRSTSAPAFVISARREEALQADQQPASADAAATDSPAEQLSDESLVRLLRARALAGDTLRTAARRLQEPLERCRALARAHRLPFKAGYVKGGSRS
>NZ_CP018758.1|WP_074528149.1|1260950_1261274_+|hypothetical-protein
MNPHTQLSRVTHQCRQCGHHLCRPQAIAGEVLVCSVCHSQDIEPLQAEGEPESGTYHDTTVVFRVSGSREQADGFFSTLDTLFRDDGLAEIVAIEAGNKLQLQAGGQ
>NZ_CP018758.1|WP_074528148.1|1259389_1260769_+|replicative-DNA-helicase
MNQPLVLPDIELVAGSLVPAHSQEAEQAVLGGLMLDNSTWDLIADVLQEEDFFYRPHQLIFRRIALLASQSSPFDVVTLAEVLPEVQEVGGIAYLATLAKDTPSVANIVAYAEIVAERAHLRRLTLFGFGCSREASTPGAKAAEIQDQAEHQLFALGQDRKASQFCDVPATLGKLIDTIDYRFNNPTPVTGVPSGLTDLDTLTSGWQDTDLIIVGARPGMGKTSFMLNCIDAALQHDLQKTVQLFSLEMPADQLLLRNLAILGKLDAQKLKLGQLEDEDWTKLTYAVDRLNKYGDRLVIDDTAGLTPTQLRARSRRAAKRYGPPALIMVDYLQLMQCAGKENRANEIGAITGALKGLAKEMRCPVIALSQLNRELERRPNKRPINADLRDGGSIEQDADVIVFLYRDEYYHPETEHKGIAEVIISKHRQGPLGTVYAAFIASQTRFENLGAQAWREMQS
>NZ_CP018758.1|WP_074528147.1|1258694_1259393_+|DUF2786-domain-containing-protein
MNANKQKILERVAKCFALARDAGAAPNEAETALRQARKLMQQHHLLEADIHAVLACEASVATGTRRSPAHWLHQLAQVCSEAFDCDHLAYFDQRLGWAFKFVGVGVAAELASYAYSALHQQLLAARKAFVQSQSRCKLATKRRRGQIFAEGWIAAVRVKVQAFAQGKPDETQQAISAYLALTHPNLKTFELEYIEAKGHDTRSRLQGFQQGKTAQLHRGVNRQGGLALGDRV
>NZ_CP018758.1|WP_074528145.1|1257068_1257929_+|ParA-family-protein
MKTTSKTSTKGGTGKTTSVANLGAFCADSGLRTLMIDLDPVQPSLSSYYDLVEPAPCGVFELIANNETRLEHIVSRTSIKNLSLIYSNDPHNHLINLLLQAPDGRLRLAHLKDIFQDDFDLVLIDTQGARTVLLEMVMLASDLAVSPLPPEMLSAREFNRGTLQMLDGLRPYARLGLPVPPIKAVVNGLDLTADARQLNSTIRETFRGHADIQVLDTVIPDAVVYRESATLGIPAHRLEYKQPSNRQAPAALQVIRNLAIELFPEWADRFTAMTESVVHALVKGGK
>NZ_CP018758.1|WP_074528157.1|1266755_1267649_-|hypothetical-protein
MLGRVASGITQAEMLGSVASGNTQVGVLGSVGSGNTQVGVLGSVGSGNTQVGVLGRVASGNTQVGVLGSVASGNTQAGMLGSDASGITQAEMLGSVASGNTQVGVLGSDASSKTQVRVLGRVASGITQAGMLGSVASGNTQVGVLGRVASGNTQAGMLGSNASGITQAEMLGSVASGNTHVGVLGSVASGNTQVGVLGSVASGNTQVGVLGSVASGNTQAGVLGSVASGNTQAGMQGSDATGITQAGMLGRVATGNALAEVLGSDFPGITQCECLDHCLVPPRPISDLMLFSAIRPV
>NZ_CP018758.1|WP_074528158.1|1267767_1268568_+|TIGR03761-family-integrating-conjugative-element-protein
MADTFQLNLGSLRSSIDLTLHTHHASRLWFGRQRVDNKPGMIGLSGFANIINRITASAAKDDPYADLYLIMIEEKIEESEQEMTAIDQRLDQIMAMLPKQLDVGTNLSIQPLKVPLYLNSPLAFRGVYLLTQYDELVRRILLAAHIGLIDTRSKELWLDEGAAVLRRLYGVGQRYKGYSGASRDDMAANNARAINAKEMYAFLEMPKDVLEGTRRSKFAPAIQRPGDAPTTTQCDDDDFGDGDSAEEDEHPGEPSGLQSANALSEA
>NZ_CP018758.1|WP_074528159.1|1268572_1269148_+|DUF3158-family-protein
MALQQSTQGSNAAELQQTAFQPLQQTVFASLQHAPFYKGLLKPFKGKGELDQLAEQCRSLAADLNALAQERVLAQAQRYPFTLLPIRLTHQVTSAGTVFLRWQKVGTRQMGVQLWEELCQDTKTPESMLADLHALEQQRIALNMQISLVHSIGRQAAECAEKMAQADAVITKRLAQTASTPATSPTQGASS
>NZ_CP018758.1|WP_081375562.1|1269144_1270041_+|Rha-family-transcriptional-regulator
MTQTKSSLSNALDAAQAQMTAGAGSSTGPVSVQVIAGQPMTTSLDVAEHFGKQHKDVLKRIASLDCSPEFHQRNFAPMSIKVSVGNGAQREDPAYRMTRDGFTFLCMGFTGAKAARWKEAYIGAFNQMEQALREPTPQALPDLNRRAQLTFAIRTLDMMRDGLPGQAPKPPTDQVVRQFLDVPSLEQASEEQIRLALSFVQGQIIGESSAGRVLPGVAGTSVGKRLLYELLESAHDAESLFASMYDAGVEKLASQDFRDHLAGKLSDTSRSARDLLGYVSSFASRDPYQVKRPRQGTH
>NZ_CP018758.1|WP_074528160.1|1270098_1270557_+|single-stranded-DNA-binding-protein
MGTEVVWEGNIGSDPEYRKIQKGNNEPRHLLRLNVYFDRSIRLADGSREDRGGFWANVEWWHRDAESYSNLFQKGMRVLVDGVAVMDRWKDTNGLEQAALKLEASRVGILPHRLLSVELGQSSGNGQARQSAAPQQAPAPQAAGDFDDEIPY
>NZ_CP018758.1|WP_074528161.1|1270804_1271011_+|CrpP-family-protein
MAKRTAAKAKPKPHDRRSGALAHAAAAKAGAEAAIAKAGLHACPYDHPPFRASWLKGYWGAAQQTFDF
>NZ_CP018758.1|WP_074528162.1|1271093_1271423_+|hypothetical-protein
MSFHTELWILLEGGRAADVEGIRSHLTDYLDRNGLHHQVYNDLFTAFSSGNSILNLDGWSVRALLAEVSKQLPKLEFAARGVGEEIRDIWVREFAGGEQGFEAGPWSEG
>NZ_CP018758.1|WP_074528163.1|1271596_1273567_+|DEAD/DEAH-box-helicase
MSRPSLRNAAGNSQLLQRAVFDGYDFGLKMPYLEGANRLLTSRGGFFIRRGEHPLSRYWRVPKGRLLEDLDVLYHLLVELADGRFADQWTAFSEKIAQAQGDPRRDLFVWGMRLRIAPLSGGGVVLSGDYHPGCIAMAKRMGGAFLSVSRAWRVPTSAELLRSNLILELGLLEEQFEMIDVLQELLSDGSISAARDVTAISIGGPPQERSAPLGEEDSAAEVYLAAVPDIAKTSWTVEAIGEALKPYSLMPHQPAGVRHLLQRTSALLADDMGLGKSRQAVIAAGIQSAGERILVVVLASLVINWEREIQAVYPDARIARQRYQAHAQWVIVNYERLGDFVAIADQFAVMIIDEAHRLKEPTAAWTRNGFDIAAKVPNRYLLTGTPVLNRESELHTLLRLSGHPIGQLPLTEFCERFAGSPEFRQALRAEISDWMLRRRKDVLPDLKGKQLQTVPVVLDELQQREYDAIRSADRPVFARLGQLRQLLERVKVPVVMELLAELDPQDKAILFCEYKESVATLQALCEAAGLGCVTLVGTDSVTKRQKAIDRFQQDADCRIFIGTTSAAGTGNNLTAANYVFFLGLPWTPGLQDQAEDRAYRKGQQRLVVVKIPLVEDSIDLQLWQMLKDKRRIASDLIEPDTAAEQARSELASALVA
>NZ_CP018758.1|WP_074528164.1|1273670_1273904_+|DUF3606-domain-containing-protein
MTDNIGIRGPQDPKTVNLHQEWEVRHWCKEFACTEDELREAVELAGSNALEAVRVAVGAVKRAKANKRFNSGPSLKL
>NZ_CP018758.1|WP_074528165.1|1274006_1275182_+|pilus-assembly-protein-PilL
MTWKLSTLPPLALGAALAGCATPDIAPPAAAPDSSRNPELLQPDLYPKGAVSEPQVRYGRYTLVNTAPETEQRDLMAQIIDVSIPASMKPSVRDAMQYVVNRSGYSLCGPEQGHVNILYTRPLPAAQYKLGPMSLRNTLQVLAGPAWQVKVDEVMRSVCFVLSPGYQLPEAPRLAVLPARTPAPAPTTTLAAETATSSAAAPTLPLQVQGAPASGTKAASVTGLGTTARPTPEHHRATLAKDGPSTSPTTARTAAQAAATPHPAPSVHPAPTPLPAKPSAVADSTASGPTTYGQPSFRLSEPASAMSESWDAPVGSTLRQSVEAWAKRAGWQVIWDADDLDYPIEAALHFRGTFAEAIAQVFPLYDSARRSFIVDGNSSQRIVHVSERKKS

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Crispr_ID: NZ_CP018758_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_2

1559471-1559553

Orphan

Consensus_repeat	Method
GGGAGAGGGCTAGGGTGAGGGCCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018758_2

>merge|NZ_CP018758|2|1559471-1559553|CRISPRCasFinder
GGGAGAGGGCTAGGGTGAGGGCCACCCCACACCCAAAGCTCCAGATCCCCTCTCCCCCGGGAGAGGGCTAGGGCGAGGGCCAC

>NZ_CP018758|2|2|1559471-1559553|CRISPRCasFinder
GGGAGAGGGCTAGGGTGAGGGCCAC	CCCACACCCAAAGCTCCAGATCCCCTCTCCCCC
GGGAGAGGGCTAGGGCGAGGGCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_074528296.1\|1560897_1562697_+\|NACHT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227922
NZ_CP018758.1\|WP_074528294.1\|1556506_1559422_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|235966
NZ_CP018758.1\|WP_157772811.1\|1568034_1568934_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_081375577.1\|1564803_1565244_+\|Bro-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|376797
NZ_CP018758.1\|WP_074528297.1\|1562876_1563920_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528300.1\|1569195_1569939_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP018758.1\|WP_081375576.1\|1555129_1555870_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225524
NZ_CP018758.1\|WP_058761547.1\|1550299_1551517_+\|beta-ketoacyl-ACP-synthase-I	unknown	unknown	gnl\|CDD\|181184
NZ_CP018758.1\|WP_058761546.1\|1551771_1552986_+\|sugar-MFS-transporter	unknown	unknown	gnl\|CDD\|340952
NZ_CP018758.1\|WP_074528299.1\|1566733_1567207_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP018758.1\|WP_058761552.1\|1547153_1547591_-\|hotdog-fold-thioesterase	unknown	unknown	gnl\|CDD\|182360
NZ_CP018758.1\|WP_058783874.1\|1548383_1549406_-\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234629
NZ_CP018758.1\|WP_058761545.1\|1553395_1554742_-\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|234968
NZ_CP018758.1\|WP_074528295.1\|1559594_1560845_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|235968
NZ_CP018758.1\|WP_058768530.1\|1565544_1566678_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP018758.1\|WP_058768528.1\|1564204_1564630_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|237361
NZ_CP018758.1\|WP_157772810.1\|1567294_1567711_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_058761548.1\|1549772_1550288_+\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	unknown	unknown	gnl\|CDD\|179953
NZ_CP018758.1\|WP_058761550.1\|1548064_1548352_-\|DUF4389-domain-containing-protein	unknown	unknown	gnl\|CDD\|379561
NZ_CP018758.1\|WP_058765903.1\|1547612_1548068_-\|phosphohistidine-phosphatase-SixA	unknown	unknown	gnl\|CDD\|224973

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_074528296.1\|1560897_1562697_+\|NACHT-domain-containing-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	2.84756e-22
NZ_CP018758.1\|WP_074528294.1\|1556506_1559422_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|235966	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP018758.1\|WP_081375577.1\|1564803_1565244_+\|Bro-N-domain-containing-protein	gnl\|CDD\|376797	pfam02498, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	3.06359e-12
NZ_CP018758.1\|WP_074528300.1\|1569195_1569939_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.71169e-14
NZ_CP018758.1\|WP_081375576.1\|1555129_1555870_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225524	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism].	1.9872e-62
NZ_CP018758.1\|WP_058761547.1\|1550299_1551517_+\|beta-ketoacyl-ACP-synthase-I	gnl\|CDD\|181184	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I.	0
NZ_CP018758.1\|WP_058761546.1\|1551771_1552986_+\|sugar-MFS-transporter	gnl\|CDD\|340952	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of L-fucose permease (also called L-fucose-proton symporter) and similar proteins such as glucose/galactose transporter and N-acetyl glucosamine transporter NagP. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. Glucose/galactose transporter functions in the uptake of of glucose and galactose. The FucP-like subfamily belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.69214e-147
NZ_CP018758.1\|WP_074528299.1\|1566733_1567207_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.02065e-11
NZ_CP018758.1\|WP_058761552.1\|1547153_1547591_-\|hotdog-fold-thioesterase	gnl\|CDD\|182360	PRK10293, PRK10293, 1,4-dihydroxy-2-naphthoyl-CoA hydrolase.	4.24816e-40
NZ_CP018758.1\|WP_058783874.1\|1548383_1549406_-\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	8.43471e-163
NZ_CP018758.1\|WP_058761545.1\|1553395_1554742_-\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	0
NZ_CP018758.1\|WP_074528295.1\|1559594_1560845_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|235968	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated.	0
NZ_CP018758.1\|WP_058768530.1\|1565544_1566678_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.86757e-53
NZ_CP018758.1\|WP_058768528.1\|1564204_1564630_-\|transcriptional-regulator	gnl\|CDD\|237361	PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional.	3.30452e-06
NZ_CP018758.1\|WP_058761548.1\|1549772_1550288_+\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	gnl\|CDD\|179953	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase.	2.1122e-131
NZ_CP018758.1\|WP_058761550.1\|1548064_1548352_-\|DUF4389-domain-containing-protein	gnl\|CDD\|379561	pfam14333, DUF4389, Domain of unknown function (DUF4389). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 104 and 223 amino acids in length. There is a single completely conserved residue R that may be functionally important.	3.65004e-22
NZ_CP018758.1\|WP_058765903.1\|1547612_1548068_-\|phosphohistidine-phosphatase-SixA	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	2.359e-26

>NZ_CP018758.1|WP_074528294.1|1556506_1559422_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MHTDLTREQAQQGRPAQDDSQDLGATAPGQLRVIKRNGTVVPYTDDKITVAISKAFLAVEGGTAAASSRIHTTVKQLTDQVSSTFKRRMPSGGTIHIEEIQDQVELALMRAGEQKVARSYVIYREARSQERKQGAASDIAEPHPSIRVTKADGTTQPLDMGRLNTIISEACEGLEEVNGELIQKETLKNLYDGVAEKDVNTALVMTARTLVEREPNYSYVTARLLLDSLRAEGLSFLGVAESATHHEMADLYAKALPAYVAKGVELELLDPKLATFDLAKLGAAIDHERDQQFTYLGLQTLYDRYFLHSHGTRFELPQLFFMRVAMGLAHMEKDKEARAIEFYNLLASFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYGAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGNWTLFSPADVPDLHDLYGKAFEERYEYYEALTEYGKLKLHKTIKAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSVNLVNHIVDGKLDTAKVARTVKTAVRMLDNVIDINYYSVPQAENSNLKHRPVGMGIMGFQDALYLQHIAYGSDAAVQFADTSMEVISYYAIQASCDLAEERGSYSSFQGSLWSQGILPIDSEKRLIEERGAKYIEVDLSETLDWAPLRERAKKSIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARGLWDSVMVNDLKYYDGSVQQIERIPQDLKDLYATAFEVETKWIVEAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWFRGLKTTYYLRALAATSTEKSTINTGKLNAVSADPITGVQASAAPAPAQKVEAAPAPAPAPVPKACSLDDPECEACQ
>NZ_CP018758.1|WP_081375576.1|1555129_1555870_+|4'-phosphopantetheinyl-transferase-superfamily-protein
MRSLSVNDLPSCCSAPSELPPLNPELAALEILCCRFDPTQVNLERDALRLGIEPPDNIRRAVAKRQAEYLAGRLCAREALRRLSGIDAVPGHTSEHRGPVWPSGHVGAITHSHGWAAAVAGRQQDYLGLGLDVESLLEPTKALRLAEQILTPTELERLDPLDETEQAFAITLAFSAKESLFKALYPQVRQMFFFQDAEILSHRPTGSFGIRLLLDLSPRWQAGTQLEGYFRLDEENRLLTLLAPKA
>NZ_CP018758.1|WP_058761545.1|1553395_1554742_-|dicarboxylate/amino-acid:cation-symporter
MTATVDTTTTTAPAPKRNVKQPLYKSLYFQVIVAIVLGVLLGHFYPQTGAAMKPLGDGFIKLIKMVIAPIIFCTVVTGIAGMQNMKAVGKTGGMALLYFEIFSTIALLIGLVVVNIVQPGAGMNVDVSTLDTKGIAAYAAAGEKQSTIDFLLNIIPSTVVNAFATGEILQVLFFAVLFGYALHRLGETGQLVFNFIDRISHVFFNIINVIMKLAPIGAFGAMAFTIGKYGVGTLVQLGYLMACFYITCLLFVLVVLGAVCRMHGFSILKFIKYIREELLIVLGTSSSESALPRMLTKMQKLGAEKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNTQMDITHQITLLLVLLISSKGAAGVTGSGFIVLAATLSAVGHVPVAGLALILGIDRFMSEARALTNLVGNGVASIVVAKWCGQLDEQTLKTELARGPNAVEIEEARQTA
>NZ_CP018758.1|WP_058761546.1|1551771_1552986_+|sugar-MFS-transporter
MHNQNQSYRGPLIVLTMLFFMWGLITSLNDILIPHLKAVFTLSYLQASLIQFCFFTAYFIVSFPAGRLVESLGYKKGIIVGLLTAGVGCVLFYPAAGAHSYGFFLTALFVLAAGITVLQVAANPYVTILGKPETAASRLNLTQAFNSLGTTVGPLVGAVTILALVGEDSAAHSVQLPYLILAGMLVALAVIIGLFRLPQIKDTEQDNATDENALTANSVWAYRHLLLGVVGIFMYVGAEVSIGSYLVSLMESPDVAGLDAATAAKYLSLYWGGAMVGRFIGGVIMTKVRPNLVLTFNAIAIGVLLAVAVLQGGKIAMWALLAIGFFNSIMFPTIFSLALKGLGKFTSKGSGLLCMGIVGGALVPAIQGYFADTIGLLPSFVIPLICYVYILFYGVMGYRPTLRR
>NZ_CP018758.1|WP_058761547.1|1550299_1551517_+|beta-ketoacyl-ACP-synthase-I
MRRVVITGLGIVSCLGNDKDTVSANLRAGRAGIRHNPEYAEMGLRSQVSGSIDLNLEELIDRKVKRFVGDAAAYAYLAMEQAIKDSGLSEEQVSNPRTGLIAGSGGASTFNQMEALDILREKGVKRVGPYRVTRTMSSTVSACLATPFKIKGLNYSVASACATSAHCIGLAMEQIQLGKQDVVFAGGGEEEHWTQSMLFDAMGALSSDYNETPEKASRAYDSKRDGFVIAGGGGMVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAIRCMQQALSTVDGEIDYLNTHGTSTPVGDVAEIKGVRAVFGDKAPTISSTKSLSGHSLGAAGVHEAIYCMLMMEGNFIAASANIDELDPEVADMPILRETKEGAKLDLVMSNSFGFGGTNATLVLKRWQG
>NZ_CP018758.1|WP_058761548.1|1549772_1550288_+|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA
MTKQHAFTYEDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISEVGGKYGKGELVAELDIRPDLWFFGCHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLILAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
>NZ_CP018758.1|WP_058783874.1|1548383_1549406_-|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MTVQSPIAVLGGGSFGTALANLVAENGLPVRLWMRDPQQAETIRRERENPRYLKGIKVHAAVEATSDLPAAIADCELVLVALPSSALRQALAPIASQLEGRFLVSTTKGIEAHSFMLMSEILAEIVPRARIGIISGPNLAREIAEHQLTATVVASEDEAVCRQVQAALHGRTFRVYASADRLGVELAGALKNVYAIIAGMAAALEMGENTRSMLITRALAEMTRFAVQRGANPITYLGLAGVGDLIVTCSSEKSRNYRVGHALGRGLSLEEAVAQIGETAEGVNTLKVLKEKADELGVYMPLVNGLHAILFQGRSLGQVIEALMGGEPKTDVDVADATFI
>NZ_CP018758.1|WP_058761550.1|1548064_1548352_-|DUF4389-domain-containing-protein
MSEPTHSRELLGLRLIWMLLFLFVWLGAQYVLAVVVLLQLVVRLVKGEANPGLTDFGAALATYLAQIVRFGTFASEAKPWPFADWPAEGRSATAP
>NZ_CP018758.1|WP_058765903.1|1547612_1548068_-|phosphohistidine-phosphatase-SixA
MKLWLLRHGEAEARAPSDELRELTVAGRAAVLRSAAQLQDADLQLILASPYVRARQTAALVQQHLAWAGELHTAAWATPDGEPERALAELERQGVERLLLVTHNPFVGDLAGWLLHGHRQAPVPMGTACLLCLEAPLPLAGGFDLVRRFDA
>NZ_CP018758.1|WP_058761552.1|1547153_1547591_-|hotdog-fold-thioesterase
MSIWQTPPDPAALTGLLDDTLGQHLDMRIEAWDDDSLTASMVVDRRTHQPMGLLHGGASVALAETVGSVASMLCVDRARYYCVGQEINANHLRGVRSGRVTAVARPLHLGRSSHVWDIRLSDDEGRLTCVSRLTVAVVPLQRDAS
>NZ_CP018758.1|WP_074528295.1|1559594_1560845_+|ribonucleotide-diphosphate-reductase-subunit-beta
MLNWDEFDKDDDTTTAKPAQAAGQQAPAQTERLDSEGDALAHDARAVDATDSAAVARAKAALNELDIQEGLDDLEGSSARVHVGDKQMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADIATWKSADGLTEDERRIVKRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPEFKTGTPETDRQFLKNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLNFGIDMINQIKIENPHLWDAQMKDDATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGATNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD
>NZ_CP018758.1|WP_074528296.1|1560897_1562697_+|NACHT-domain-containing-protein
MDEQKLLEIAVSSFVKEITKDIKSFCKGISDEAKNLLETGIDNYIQLQYERFKQVKTILRGNTPNYFYDVYYPLNIKNPKHLAVTSSISNTFEKSNYVTVIGDAGSGKSTLVKHLFLRALSEKNIIPIFIELRNLPNEKGSIEAHVKEKIIDSNISDNHRILDRMLANGKFLFFLDGYDEVTGDSKKTIVESLNNFVEKHSKNKYLLTTRPYSDIDLLPLFHNYKIEQLEKDDIDKFIEKQLREEPELADKIKKSIKEAKARYINSFLKNPLLLSLYILTYQSNASIPTKKYVFYRRVINALFSEHDSKSKLGFERETRCKLQQEEFERILKSFCFVSYFEESFTFQHDQLVSKLELIKAKNSALKFSSTDFIIDMKTAVSLWTEDGGVISFAHRSLQEYFAALFIKDLNDSNKEKVYEKIRDYSESMTVTTEIENFLSLCEEMDEIHFNQHYALPTLEELKKQISGRLQLNKFLDFFTTGMSIMVGTAKDIYPSVNKNIYKSVYFHLPYTIRLHQMLTKIPLNSLHPEIPTNLSTDKFHVYYFKKTKGLKKKVIDHIKLSGGDRLASKFSAHVNKEIERRTALVESQTKSNNDLVDMI
>NZ_CP018758.1|WP_074528297.1|1562876_1563920_+|hypothetical-protein
MPRWTDQPATDTDAVFDFILEFSGTALRRHASLLAKVLPPTLGFGMFLAYFARNHFYPSFDLFQFSSLLLAAACLGFLTIGAFVAALFLPGAWVYYRFINTPAIKEDITYALPYRTEGRFRKIMLLMTLVFFVPYLLAGFSDAAILFVDPELFVSVALLAPIPITLLAGMAVQGLFDLRRFSFLKFVWEAYLSTMVVGLFIVWMLAQAYPLVSEWQPLFKWGALAIAPFIISFVVTMTSMIFIAGWNAALMFSLFFALLLAGYSGVLTTLPETMVKTLGLGNYQAKAIVLDASYCAKEQAKLLPTNEQCVLQDVQVVWSLGEAFVLRLADGSTARLPASAIRALVKP
>NZ_CP018758.1|WP_058768528.1|1564204_1564630_-|transcriptional-regulator
MNDKADFAQRLRNAMLAAGYPDRPAVLEREFNSRYWGRSVTFQAVSRWLRGKSIPAQDKLQVLAQWLQIEPQVLRFGEQAQTAIRETRGNWETPELYPEREAIEAFLKLPAEQRKVVRDVILAFVKAGPSQPVAKGGKGKA
>NZ_CP018758.1|WP_081375577.1|1564803_1565244_+|Bro-N-domain-containing-protein
MPTSHLMHFAGRPLRIYQFFDGQLWFDCRDVAKVLGYPDALKAMRAHCNRNGIHLGSGDRPTMLIDLPNMMRLLIGSSSEHAERFEEWLRHDCLNRFFCRLLLPSEGQVTVDAQPLIRLCWRDQYWVKLSDVAEALGPRLRLGRPS
>NZ_CP018758.1|WP_058768530.1|1565544_1566678_+|GGDEF-domain-containing-protein
MALDAPTMLTLTIALAAAAAGYLAVEWRAVRESALLYWSTGFALISVGSTLALLRSQGQVLVGIWFANGLLIFVHGLFLLGVARFTGRRLSLGWWAFALIWLGLLLLPSQPWWSKVMLVVQSLMVGVLAVRASLLLRRRHAGERQLRLVLLAHGLFYFAKTIPPLTPGTLINLESYRGAIIQISLVEGVMAVMLIALSMTGTVRYRRERRIEQLAGSDPLTGLYNRRALEAEAPSLFGQATPECPGALLLIDLDNFKLANDLHGHAAGDELLIATSDLLRTTLPQHALAARLGGDEFVVMLAETSEAEVMRLAETLRTAFNPLAAQRCDTPEPITLSIGAVLFDQPPESLATLLERGDGALYEAKRGGRDSLRISAG
>NZ_CP018758.1|WP_074528299.1|1566733_1567207_+|GNAT-family-N-acetyltransferase
MPIALESPDQPEVIALIAELDAYQDGLYPPESRYALDLGSLLQPNVLFLVARDESGCALGCGAMVLHDGYGEIKRMYVRPAGRGRGLGGRLLAELEREAVTRGSELARLETGPYQPEALGLYAAAGYQRRGPFGAYRDDPLSVFMEKRLPIATYRAK
>NZ_CP018758.1|WP_157772810.1|1567294_1567711_+|hypothetical-protein
MTRNVLIYLLTLMISQAAYSSSQNLSDIPNKFFDLLKQGKTTEAFSFIGEETRKSEKTPSDLILKLVEGNGGYKFHELIKQVEYGKNYVSQAYIIGLQTRPALMILKLYYNGEKWSVKYFNFTSNLDDIQTQKIAEEL
>NZ_CP018758.1|WP_157772811.1|1568034_1568934_-|hypothetical-protein
MLSMVVLYLVTPALMAVVIRYKDSRGHKGIGLFRFLYLCLSRGDITDRFPVLIFIVLYLLFVSQSYVLDGGPGGWLVKAFGMILLLLLCCVSLFLASVVYNFSDFRKNNSFLVGVLGTASVSVTVALSAVWADGYISDATTVSGTEFATGMAWLGIVLSPLSWTFGLSIFALIIYAYALTKLTFTDNQVNAYVGVGLTVSKKINKSKKRFSSLVHSSCVVSLAITAVAPLQLISYLLSNDHAVRFLNGALFFSSFHIKAEVCGKEYLKGKVKLLDDDVAVLGVPNEKQGYLFSRINCKR
>NZ_CP018758.1|WP_074528300.1|1569195_1569939_-|class-I-SAM-dependent-methyltransferase
MSATALYTDLSAYYDLLCADIDYGAQSQAVLRLQRLFGNGGTRHLDLACGTGPHVRHFLDAGFQSSGLDLNPPMLAQAALRCPEAQFSCQDMCAFELEQPVDLITCFLYSLHYSGSLARLQACLARVHAALTPGGLFCFNAVDKRRIDNGSSVGHSVERADGHFNFASAWHYPGEGERQQLRLRIERRNAGQQQTWQDEHPMVAVDFPELLALLEPRFEVQVLEHDYQRIEPWDGETGNALFVCVKR

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Crispr_ID: NZ_CP018758_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_3

1787484-1787566

Orphan

Consensus_repeat	Method
GCGGTCCGCTGATGCGGCCGCTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018758_3

>merge|NZ_CP018758|3|1787484-1787566|CRISPRCasFinder
GCGGTCCGCTGATGCGGCCGCTCCTGAGCTGTACCTGTTTCGTCTTATCGCGGCCATGGCGGTCCGCCGATGCGGCCGCTCCT

>NZ_CP018758|3|3|1787484-1787566|CRISPRCasFinder
GCGGTCCGCTGATGCGGCCGCTCCT	GAGCTGTACCTGTTTCGTCTTATCGCGGCCATG
GCGGTCCGCCGATGCGGCCGCTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_058760012.1\|1778283_1779564_+\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|366370
NZ_CP018758.1\|WP_074528398.1\|1791944_1793432_-\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|234628
NZ_CP018758.1\|WP_074528401.1\|1795304_1796612_-\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586
NZ_CP018758.1\|WP_074528396.1\|1789492_1790284_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|143599
NZ_CP018758.1\|WP_058769101.1\|1780549_1780981_-\|DUF4174-domain-containing-protein	unknown	unknown	gnl\|CDD\|379363
NZ_CP018758.1\|WP_074528391.1\|1776096_1776918_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP018758.1\|WP_058769104.1\|1777220_1777775_-\|DUF488-domain-containing-protein	unknown	unknown	gnl\|CDD\|377317
NZ_CP018758.1\|WP_058760006.1\|1787748_1788210_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP018758.1\|WP_058759998.1\|1796636_1797749_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|234737
NZ_CP018758.1\|WP_074528392.1\|1777781_1778171_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528394.1\|1783160_1786472_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|182070
NZ_CP018758.1\|WP_074528397.1\|1790271_1791420_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181642
NZ_CP018758.1\|WP_074528400.1\|1794651_1795293_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|370767
NZ_CP018758.1\|WP_058760015.1\|1777017_1777224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528402.1\|1797776_1798769_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224343
NZ_CP018758.1\|WP_058769102.1\|1779591_1780260_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|198298
NZ_CP018758.1\|WP_074528393.1\|1781343_1783014_+\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|235154
NZ_CP018758.1\|WP_058782671.1\|1786526_1787477_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381307
NZ_CP018758.1\|WP_074528399.1\|1793509_1794652_-\|outer-membrane-protein-assembly-factor-BamB	unknown	unknown	gnl\|CDD\|274511
NZ_CP018758.1\|WP_074528395.1\|1788343_1789492_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|184450

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_058760012.1\|1778283_1779564_+\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	9.36917e-27
NZ_CP018758.1\|WP_058760006.1\|1787748_1788210_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	9.20068e-47
NZ_CP018758.1\|WP_074528398.1\|1791944_1793432_-\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
NZ_CP018758.1\|WP_058769101.1\|1780549_1780981_-\|DUF4174-domain-containing-protein	gnl\|CDD\|379363	pfam13778, DUF4174, Domain of unknown function (DUF4174). This domain of unknown function is found in a putative tumor suppressor gene and in a ligand for the the urokinase-type plasminogen activator receptor, which plays a role in cellular migration and adhesion.	8.27951e-29
NZ_CP018758.1\|WP_074528396.1\|1789492_1790284_-\|amidohydrolase	gnl\|CDD\|143599	cd07575, Xc-1258_like, Xanthomonas campestris XC1258 and related proteins, members of the nitrilase superfamily (putative class 13 nitrilases). Uncharacterized subgroup belonging to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup either represents a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. XC1258 is a homotetramer.	3.68167e-158
NZ_CP018758.1\|WP_058769104.1\|1777220_1777775_-\|DUF488-domain-containing-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	2.87296e-24
NZ_CP018758.1\|WP_074528391.1\|1776096_1776918_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	4.88211e-41
NZ_CP018758.1\|WP_058759998.1\|1796636_1797749_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0
NZ_CP018758.1\|WP_074528393.1\|1781343_1783014_+\|2-isopropylmalate-synthase	gnl\|CDD\|235154	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated.	0
NZ_CP018758.1\|WP_074528394.1\|1783160_1786472_+\|EAL-domain-containing-protein	gnl\|CDD\|182070	PRK09776, PRK09776, putative diguanylate cyclase; Provisional.	0
NZ_CP018758.1\|WP_074528397.1\|1790271_1791420_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181642	PRK09082, PRK09082, methionine aminotransferase; Validated.	0
NZ_CP018758.1\|WP_074528400.1\|1794651_1795293_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|370767	pfam09976, TPR_21, Tetratricopeptide repeat-like domain. This family resembles a single unit of a TPR repeat.	1.07301e-63
NZ_CP018758.1\|WP_074528395.1\|1788343_1789492_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NZ_CP018758.1\|WP_074528402.1\|1797776_1798769_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224343	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown].	2.55915e-51
NZ_CP018758.1\|WP_058769102.1\|1779591_1780260_+\|glutathione-S-transferase	gnl\|CDD\|198298	cd03189, GST_C_GTT1_like, C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.	1.7754e-52
NZ_CP018758.1\|WP_058782671.1\|1786526_1787477_+\|aldo/keto-reductase	gnl\|CDD\|381307	cd19081, AKR_AKR9C1, AKR9C family of aldo-keto reductase (AKR). Haloferax volcanii aldo-keto reductase is a founding member of aldo-keto reductase family 9 member C1 (AKR9C1).	8.33116e-173
NZ_CP018758.1\|WP_074528399.1\|1793509_1794652_-\|outer-membrane-protein-assembly-factor-BamB	gnl\|CDD\|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	1.42174e-162
NZ_CP018758.1\|WP_074528401.1\|1795304_1796612_-\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	0

>NZ_CP018758.1|WP_058782671.1|1786526_1787477_+|aldo/keto-reductase
MQKRPLGHSELQVPPLCFGGNVFGWTLDEAQSFRMLDALLDAGLDFIDTADVYSRWAPGNQGGESETLLGKWFAKSGKRDRVILATKLGMDMGEGRKGLKASYVQQAVEASLKRLQTDRIDLYQAHCDDEHTPLEETLGAFAKLVEQGKVRVIGASNYGGQRLREAAQVAERLGVPTYQSLQPHYNLHARKDYETDLEPVVQELGLGVISYFSLASGFLTGKYRTKDDLKGSRAEMAKRYMDERGMAILAGLDEIAEKHDATPGQVALAWLIARPSITAPIVSATSQAQLDDLVAATRLQLPADDITLLDQVSAYH
>NZ_CP018758.1|WP_074528394.1|1783160_1786472_+|EAL-domain-containing-protein
MTSTLSRNTTPLRDAIGLFLLFLLSSVLCILLTRQASSSIATLWLPNGLAIAWMLRSSKTRWPSHLLVIWLAGILAELPFSGDWHIGALYSLPNLAEILFGAWLLHGRIVHPERNVAAMGRLLLYGVLTTPLAGAALGTLIAAYQNSPDLLLVVLHWYLGDALGLLIVMPLAFVRLPLQWEQFSRKGAQEFLFLALINPLLVLALLIYVHYPFVYVSTLLLLMTLRLTALGTGVVGGLNVLIFAYLVAHGDLLTAQGDSLLKGALTYIPVALMQIPPLLLAAAVQQSRHHTQRLARNEARFRHTLSAAPYGMALVTIQGRLSQVNPALEAMLGYPRHALDGRLLKELIADPEEQLTLQEGEQTRRLLHYGGQALWIQLALSPDHDDQDLLTGYLLQARDIDAQRRAEETNARLRERLQLAVRASNLGIWEWDTRTPGFQADARLRDLYGIDPRNQSRDMDFWLTFIHPDDKARSLEVFDKVASESMFYTFNFRITRGGPGGEVRHIRSELISEVEADGNVRLVGSNRDVTEHHQLTTALYEEKERLQVTLASIADAVLTTDVEGRILFLNPVAEQLTGWTLADAQGRPHEEVFRIHDSQSDAKLPSPVTRCLQEQTITSLDEGAVLLSRQGERHEVQDSAAPVRTVDGRIIGAVLVFQNVTHARNLQRELSYNASHDALTGLYNRLKFEQELEDAWQQVQAGTTQHALCFIDLDRFKVVNDSAGHAAGDLLLRELGTLLRDSLRGSDAVARIGGDEFALLLRDCDLVQAEAVAEKLIASIGAVRFNWQDRVYDVGASAGIVAITAETLSPAELMSQADVACYTAKHAGRNRAALYRAGSEDVERQHREILMASGLREALEQHRFELHAQPIVATRDSGSDEQHVELLLRLRDVQGQLISPATFIPAAERFGLMSSIDRWVVRQVLVELVPWLQERPQLRVGINLSGNSLSDPEFLPELLELIAASPLDPQRLLFELTETAVINKLSVASQLISQVRERGCRIALDDFGAGLSSFTYLKNFRVDYVKIDGSFVRNLDQDPLDRAIVESINQVAHHLGAETIAEFVESRATFELLGSIGVDYAQGYALGKPIPLKDWQGMPHREP
>NZ_CP018758.1|WP_074528393.1|1781343_1783014_+|2-isopropylmalate-synthase
MTMLKDPSQKYRPFTPVALPDRTWPDKIIDKAPIWLSTDLRDGNQSLIEPMDAEKKMAFFKCLVAVGLKEIEVGFPSASQTDFDFVRELIEGGHIPDDVTIQVLTQARDDLIERTFESLKGAKRAIVHYYNACAPSFRRIVFNQDKAGVKAIAVAAGQTIVRLAAERPETQWGFEYSPEVFSSTETDFAVEVCNAVIEVLAPTPANKLILNLPATIECATPNNYADQIEWFGRHIDRRDSVLISVHTHNDRGTGVAASELAVMAGADRVEGCLFGNGERTGNVCLVTLALNLYTQGVDPELDFSDIDAVRKTVEECNQLPVHPRHPYVGDLVHTAFSGSHQDAIRKGFAQQKPDALWEVPYLPIDPADIGRDYEAVIRVNSQSGKGGITFLLEQEYGISLPRRMQIEFSQVVQRETDRLGLEMTAAQIHGLLEQEYLQAKSPYALLSHKLREEDGTSTVDIQVAVDGRTEHWHGTGKGPLEALVASLPEAVEIMDYHEHSIGAGTNAKAASYIEIRLEGQRPLHGIGIDENITTASFRALLSALNRAVTQAQAKAA
>NZ_CP018758.1|WP_058769101.1|1780549_1780981_-|DUF4174-domain-containing-protein
MKILSLVGVATTLLAGLAATAQAADNPLDAERWKTRPLILVASTADDPQVTQLRAELAQPANREAFVEREMVLYTVAGDAGSRNDEPLRPEQTRALLKALDARAGQPATLYLVGKDGGVKVREEQGWSLKALFGTIDRMPMRR
>NZ_CP018758.1|WP_058769102.1|1779591_1780260_+|glutathione-S-transferase
MIIVHHLNNSRSQRVLWLLEELGLDYRVQRYERAAGGLFAPPELRKVHPLGKSPVIVDGDLTLAESGAIVDYLARRYGQQLLPAQDSPEFVRYTYWLHYAEGSAMTPLLLKLVFDRIATSPMPFFAKPIAKGIAAKATASFIQPQLDLHLDYLESQLGASGWFVGDSFTAADIQLSFPLEAANARAGLDNGKRPKLVDFLQRIHARPAYQRALQQGGPYVYA
>NZ_CP018758.1|WP_058760012.1|1778283_1779564_+|mechanosensitive-ion-channel-family-protein
MPTALTNLIAELDTHPQLTTLLACLGLLLGAWLLNWIVKRILVRGFYRLLRSTSFGQDQELHHHRVIGRLANIVPALVLAGGVGLIPGLPKALVTVVQNVCSAFIVLTIALALGSALNVINVLYSRRPSARLKPIKGYVQVSKIVIYAIAVILMIATLIDRSPLILLSGLGAMAAVLLLIFQDTLLSLVASVQISSNDIIRVGDWIEMPQLNADGDVIDIALHTVKVQNFDKTITTIPTKRFITDSFRNYRGMQEAGGRRIKRSLNIDQNSVHFLSDAEREHLHRFNLLDDYLTAKEEELADWNLKLEKRGQEPVNTRRVTNLGTFRAYVERYLRAHPGVRQDMTLLVRQMPLSAEGLPIEVYCFTNTTVWGQYEGIQGDIFDHLLAILPEFGLHVFQHPSGHDFRGRLDARDAMTSLGEQGNPAP
>NZ_CP018758.1|WP_074528392.1|1777781_1778171_-|hypothetical-protein
MRVLATWLLLAAAVLVAGCAARPFGPATLDDRLAELGYRQGAPVDTILGFDLSGWSYLDSRHLALGTGLGRAYLVDFAVPCGNLAAGNRLGYRSRAAGLRPGDFLVSTDVRGSRLDCPIGGLYRLDPLR
>NZ_CP018758.1|WP_058769104.1|1777220_1777775_-|DUF488-domain-containing-protein
MILTLGHSNHPLARYVELLQAQDVTAVADVRSQPYSRHVPQFCREALREGLAAAGIAYVFLGAELGARSPDPAHYQDGRLRYDRLAASELFQQGLMRLEQGQARWRIALLCAERDPLTCHRGLLVAPCLVRRGLAVMHIHPDGRLESQAELEDRLLAESGLADGDLFSSREERLGRAYARHGWG
>NZ_CP018758.1|WP_058760015.1|1777017_1777224_+|hypothetical-protein
MTPKPRLGSALGSILLVAAACYLLVGFSQGFVLSAWSWRTWVVYAVLVTVYPVGLFAGWWKKREPVER
>NZ_CP018758.1|WP_074528391.1|1776096_1776918_+|M23-family-metallopeptidase
MSRLFALLSCLLLTLPAHAGTYLQRLLDKPVPGGVAVVPVPGDQAPRVSYQGKPVLVVKDGNGWVAIVGIPLGTATGRQQLQVAGAAPLAFNVGSRHYAEQRITLKNQRQVTPNPEDLKRFERELAEQQAAYRLFSPNQPSNLLLDKPVDGPLSSPFGLRRFFNGQERNPHSGLDFAVPAGTPVKAPAAGKVVLVGDYFFNGKTVFVDHGQGFISMFCHLSRIDVQVGQQVPRGGVVGRVGSTGRATGPHLHWNVSLNDVRVDPSIFIGAFKP
>NZ_CP018758.1|WP_058760006.1|1787748_1788210_-|Lrp/AsnC-family-transcriptional-regulator
MDRFDRAILDLLQQDSTQPVADIAERIGLGTTACWRRIQKLEEQGVIRARVALLDPRQLNVGVTVFVSVRTNQHALDWLQRFHAAVAAIPEVVELYRMAGNTDYLMRIVVPDIAAYDGVYKRLIQVPGLLDVSSSFAMEQIKYSTALPLDYVR
>NZ_CP018758.1|WP_074528395.1|1788343_1789492_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MDALPLYFDYAATTPVDDAVIEAMLGCLGRQSVFGNPASRGHAFGNDAQRAVDKARQEVAELVGAQPEQLIWTSGATESNNLALLGVARRRGKGHLITSCLEHRAILDTAAQLEAEGFAVTYLTPNAQGLITADAVAQAWRDDTFLVSLMRVNNELGTLTDIAEIGTLVRARGALFHVDAAQATGKVAIDLARLDVDLMSFSAHKTYGPKGIGALYVGPHAEGALQAQIHGGGHERGLRSGTLATHQIVGMGTAFVLAGQAMVRENVRLTALRDRFLAGVQGLPGTRLNGCAQQRIPHTLNLTFATALDTVALQRQLAFSTTSACSSAKAAPSHVLLGLGLDADQAARSYRFSLGRYTTEQDVDQAIALIQTHTAQPKPFWA
>NZ_CP018758.1|WP_074528396.1|1789492_1790284_-|amidohydrolase
MRDLSPTQDLHLALLQSDLAWHDPAANRAHFERQLAEVGAVDLIILPEMFTTGFSMDSATLAEPTDGPTSAWMRAQAQRSGAVVTGSLIVQDEHGQYRNRLLWATPDGELLHYDKRHLFRMAGEHQHYAPGAERRLVTLKGWRIRPLVCYDLRFPVWSRAQDDTDLLLYVANWPAPRRGHWNRLLPARAIENLCYVAAVNRIGSDGNGHPYAGDSQVLDFQGESLVEAGAAAGIFRATLSATELAAYRQRFPAQRDADAFSLS
>NZ_CP018758.1|WP_074528397.1|1790271_1791420_-|pyridoxal-phosphate-dependent-aminotransferase
MIQSKLPDLAVTIFTRMSQLAAETGALNLSQGFPDFDGPAELLAAVGRHVAAGHNQYAPMTGLPALRQQVAAKVAAFYGREVSADTEVTIVPGATQGLFCAIQTLVRPGDEVIVFDPCYDSYEPSVQLAGGRCVHVPLALPGFGIDWTALEAALSPRTRAIVLNTPHNPSGALIGAAELERLADLIRGRDLYLVSDEVYEHLVYDGQRHASVIAHDELYARAFVVSSFGKTYHVTGWKTGYVVAPPALTAELRKVHQYVSFCGVTPIQCALADFMAAQPEHLSELPAFYQAKRDLFCDLLGNSRFTFQRAAGTYFQVVDYSAIRPDLDDVAMAEWLTREHGVAAIPLSVFYQQPPAELRLVRFCFAKREETLRQAAERLCAI
>NZ_CP018758.1|WP_074528398.1|1791944_1793432_-|ribosome-biogenesis-GTPase-Der
MVPVIALVGRPNVGKSTLFNRLTKTRDAIVADFAGLTRDRKYGEAKWQGRTYIVVDTGGISGDEEGIDLKMAEQSLQAIEESDAVLFLVDSRDGLTVADQMIAEHLRKRNKRTFLVANKVDTVDPDIARAEFSPLAIGDAYPIAAAHGRGVNNLLEAALGVFPKDEAPVEEFTEDEVRAAAEEGGDVFRRVQGIDETTGIKIAVIGRPNVGKSTLVNRMLGEERVIVYDQAGTTRDSIYIPFERNEERYTLIDTAGVRRRGKIFEAVEKFSVVKTLQAIQDANVVIFVMDAREGVVEHDLNLLGFVLETGRALVIALNKWDGMEAGERDYVKTELERRLLFVDFADIHFISALHGTGVGHLYKSVQQSFASATTRWPTSRLTQILEDAVQEHQPPMISGRRIKLRYAHLGGANPPLIVIHGNQTDAVPKSYTRYLEKTFRRVLKLVGTPIRIEYRGGENPFEGKKNTLTERQVNKKRRLMSHHKKAEKKRKDKRR
>NZ_CP018758.1|WP_074528399.1|1793509_1794652_-|outer-membrane-protein-assembly-factor-BamB
MLRWKPIAVLGLALAVVGCSSTGKKELPPAELKDIKAEVRLDEVWSRSIGDGQGKEYNRLVPAVEGQTIFAADADGRVMAMNRETGAVLWKKDLDLPVSGGVGVGAGLVVVGTLRGQVVALDASDGSEKWRAQVSSEVLSAPVVHNDVVVVQSQDAKLYAFEAGSGSRRWVYEDSLPVLSLRGTGAPLVTDQVAMAGFANGKVVAVDVQRGLPLWEQQIAVPKGRSELERIVDVDGGLSLSGDTLYVVSYNGRVAALNPANGQILWQRDASSYDGVTEGFGNVYLSLDNGTVEAVEESSTSTLWSNADLARRQLSGPVVWSSNVVVGDYAGYIHLLSQVDGRFVGRTKVDGDGIRVRPLVVGDMLYVYGNGGTLAAYRLR
>NZ_CP018758.1|WP_074528400.1|1794651_1795293_-|tetratricopeptide-repeat-protein
MSSIDDDNLVVAKAWWQRNGKPLVAGGVIALVAVLGWQGWQRYQNNQAQGASVLYQQLVEAALAPGGKVDTARVTDTFGKLKQDYSGTAYAQYGSLFVAKVAADSNRLDDAANELKTVLAKPYDEELGELARERLARVLAAQGKVEEGLKLLDGQAPKAYVANREELRGDLLVALKKPVEARLAYEKARAALPNDAAEGVLQMKLDDLAKGDA
>NZ_CP018758.1|WP_074528401.1|1795304_1796612_-|histidine--tRNA-ligase
MSKSLQAIRGMNDILPEQTPAWRYLERTFATLLDGYGYHEIRLPIMEFTELFARGIGEGTDVVDKEMYTFLDRNEESLTLRPEGTAGCVRAVLEHGLTGGGQVQKLWYAGPMFRYEKPQKGRYRQFHQIGVEVFNLPGPDIDAELIVLTARLWQRLGLTDAVTLQLNSLGSSADRGRYREALVAYLQERFAQLDEDSQRRLTTNPLRILDSKNAQTQALLQEAPTLADYLDDESRAHFDGLKARLDAAGIRYEINPKLVRGLDYYGRTVFEWVTDKLGAQGTVCAGGRYDGLITQFGGKPTPGVGFAMGVERLVLLLETLERLPSDLMRPADLYLCAFGEAAELAGLSLAEKLRDARPDLRLLVNAGGGSFKSQFKKADKSGALWAMILGEDELAAQQVALKPLRGDAPQEKVDFAALAARLDEILPPAAAGRGN
>NZ_CP018758.1|WP_058759998.1|1796636_1797749_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MHSESPIKRRLSRKIWVGSVPVGGDAPIAVQSMTNTETCDVDATVAQIQRLQDAGADIVRVSVPDMDAAEAFGRIKQRVSLPLVADIHFDYKIALRVAELGVDCLRINPGNIGREDRVKAVVDAARERGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESAMRHVDHLEKLDYPDFKVSVKASDVFMAVAAYRQLATRIEQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEIKVGFDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHVGLTGGTPNNLVYIDGKPASKLNNDNLVDELEGLIRRKAAEKAEADAALIARS
>NZ_CP018758.1|WP_074528402.1|1797776_1798769_-|helix-turn-helix-domain-containing-protein
MTAVQSEAVHAGRGNPGEILRQKRLELGWSQAQVAQSLNLSARIIDQLEAGNYQQMPGHTFTRGYIKAYGKLLGLDQVELVRAFDSYTGTDAKGSTVHSLGRLDEPVRLSRNILRFVSFILVVLIIAMGLFWWQERSRQASVGSAVSMEHVEVEGADGKTEIHPIDEPEEQQPPAAAQSPAASLPSPVGTPVPDANTVANMPAPAATPAPPAAASVTGAPSTAAPAAATTAAPTATPSAPAAPAATGADNLAIRFSANCWVQVSDGTGKILFSGLKKGGESLDYASIKAPVNIRLGYARGAQITYNGQIVDLAPFTKGETARIKLGQAGQ

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Crispr_ID: NZ_CP018758_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_4

2207450-2207536

Orphan

Consensus_repeat	Method
TCAGCTTGGCACCGATCTCGGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018758_4

>merge|NZ_CP018758|4|2207450-2207536|CRISPRCasFinder
TCAGCTTGGCACCGATCTCGGTGGAGCCGGTGAAGGAGATCTTGCGCACGATGGGGCTTTCGGTCAGCTCGGCACCGATCTCGGTGG

>NZ_CP018758|4|4|2207450-2207536|CRISPRCasFinder
TCAGCTTGGCACCGATCTCGGTGG	AGCCGGTGAAGGAGATCTTGCGCACGATGGGGCTTTCGG
TCAGCTCGGCACCGATCTCGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_058764891.1\|2195601_2196579_-\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP018758.1\|WP_058764866.1\|2211394_2211712_+\|quaternary-ammonium-compound-efflux-SMR-transporter-SugE	unknown	unknown	gnl\|CDD\|171110
NZ_CP018758.1\|WP_074528551.1\|2211724_2212210_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_058764853.1\|2217749_2218004_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528546.1\|2198395_2199397_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529
NZ_CP018758.1\|WP_058776751.1\|2215943_2217584_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP018758.1\|WP_058764880.1\|2200325_2201192_+\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
NZ_CP018758.1\|WP_074528548.1\|2203893_2205099_-\|response-regulator	unknown	unknown	gnl\|CDD\|370050
NZ_CP018758.1\|WP_074528547.1\|2202312_2203863_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP018758.1\|WP_058793483.1\|2201198_2202167_+\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
NZ_CP018758.1\|WP_074528552.1\|2212318_2213401_+\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP018758.1\|WP_058764882.1\|2199502_2200315_+\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
NZ_CP018758.1\|WP_058764851.1\|2218251_2219145_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180413
NZ_CP018758.1\|WP_074528550.1\|2209751_2210687_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|224629
NZ_CP018758.1\|WP_058764888.1\|2196693_2197881_-\|aminotransferase	unknown	unknown	gnl\|CDD\|224316
NZ_CP018758.1\|WP_058767369.1\|2198132_2198318_+\|sulfur-starvation-response-protein-OscA	unknown	unknown	gnl\|CDD\|378371
NZ_CP018758.1\|WP_074528553.1\|2214881_2215823_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP018758.1\|WP_058772386.1\|2213741_2214815_+\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224662
NZ_CP018758.1\|WP_058764872.1\|2205213_2206494_-\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236149
NZ_CP018758.1\|WP_058788194.1\|2210851_2211238_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_058764891.1\|2195601_2196579_-\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	3.03497e-60
NZ_CP018758.1\|WP_058764866.1\|2211394_2211712_+\|quaternary-ammonium-compound-efflux-SMR-transporter-SugE	gnl\|CDD\|171110	PRK11431, PRK11431, quaternary ammonium compound efflux SMR transporter SugE.	6.81643e-31
NZ_CP018758.1\|WP_074528546.1\|2198395_2199397_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
NZ_CP018758.1\|WP_058776751.1\|2215943_2217584_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.99896e-69
NZ_CP018758.1\|WP_058764880.1\|2200325_2201192_+\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	1.07345e-139
NZ_CP018758.1\|WP_074528548.1\|2203893_2205099_-\|response-regulator	gnl\|CDD\|370050	pfam08668, HDOD, HDOD domain.	1.9039e-32
NZ_CP018758.1\|WP_074528547.1\|2202312_2203863_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	9.09828e-53
NZ_CP018758.1\|WP_058793483.1\|2201198_2202167_+\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.58459e-167
NZ_CP018758.1\|WP_074528552.1\|2212318_2213401_+\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	1.02836e-150
NZ_CP018758.1\|WP_058764882.1\|2199502_2200315_+\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	5.70856e-134
NZ_CP018758.1\|WP_058764851.1\|2218251_2219145_+\|SDR-family-oxidoreductase	gnl\|CDD\|180413	PRK06128, PRK06128, SDR family oxidoreductase.	0
NZ_CP018758.1\|WP_074528550.1\|2209751_2210687_+\|restriction-endonuclease	gnl\|CDD\|224629	COG1715, Mrr, Restriction endonuclease [Defense mechanisms].	1.08882e-115
NZ_CP018758.1\|WP_058764888.1\|2196693_2197881_-\|aminotransferase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	6.58775e-105
NZ_CP018758.1\|WP_058767369.1\|2198132_2198318_+\|sulfur-starvation-response-protein-OscA	gnl\|CDD\|378371	pfam10055, DUF2292, Uncharacterized small protein (DUF2292). Members of this family of hypothetical bacterial proteins have no known function.	5.17e-13
NZ_CP018758.1\|WP_074528553.1\|2214881_2215823_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.7508e-33
NZ_CP018758.1\|WP_058764872.1\|2205213_2206494_-\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236149	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP018758.1\|WP_058772386.1\|2213741_2214815_+\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	1.67548e-89

>NZ_CP018758.1|WP_058764872.1|2205213_2206494_-|4-aminobutyrate--2-oxoglutarate-transaminase
MSHTNDSLMHRRSAAVARGVGQTHPIFVARAENAKVWDVEGNEFLDFAGGIAVLNTGHLHPRVVAAVQEQLTKVSHTCFQVLAYEPYVEVCEKLNELVPGNFPKKTALFNSGSEAVENAVKIARAATQRAGVIAFSSAYHGRTMMTLSLTGKVAPYSAGMGLMPGGVYRALYPCELHGISVDDAIASVERIFKNDAAPGDVAAIILEPVQGEGGFYAAPKDFMQRLRKLCDTHGILLIADEVQSGAGRTGTFFAMEQMGVDADLVTFAKSIAGGFPLSGVTGRATVMDAVAPGGLGGTYAGSPIACAAALAVIETFKEENLLDRSKAVGERLTAGLRELAAKHRQICDVRGLGAMIAMELGKGGDVEQPDAELTSQIVVRARQKGLILLSCGSYGNVLRILVPLTASDEELDRGLAIIGECFAELT
>NZ_CP018758.1|WP_074528548.1|2203893_2205099_-|response-regulator
MPPLILIVDANPWTRDLLKSLILAVRADALVHEYGHGYQALAELDRRKRCALVIVESPADCDGLDLLRRIRQRGVQPLQPVILLSDQADAAYVRAALRLAPTAYLVKPYAAEEVLRRLRSLLPPADDDLQAGQAELLGTLDDYLQRLAAEIDAVPLFADLPSIIQRCRDSASCSLGELETEFGQDPLVTATLIAAANSASQRVGQSCQTLSQALPRLGVGFTLNLVLGLSLRRATRLGHPLLAERAEVYLHFAQRAADCARLLALRYVREDAERCYTGGLLHRLGELAVLQGLQRWSDGGGMVDEAAVERALARYSLEFSTELQRHWRLPLELRELVAAVHSLQGVLPKPSLILHLAAHAASLTADEELETLVEHKAGRMLGLEAPVWKLAVSQLKLSSAV
>NZ_CP018758.1|WP_074528547.1|2202312_2203863_+|methyl-accepting-chemotaxis-protein
MPKRWLAVLSLHLVTLAGALLLWQAFALPMVEGAGLTLLAALWPWLLMRPNAPPPEPAQAGDELTRDLSRSTARNAVAIAGVAYAAQQLAAKVQSQASAAAQISTSAASLTHTEQDSASSARQALDVVQQVHERSEAGQVALSSAIRAIQALGDHARESRELIAGLSARTDKIQQVTEVIQAIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAARTSQATGEVGLIVADISQQTGAVVSQIQQLANALEDGVRQVEQTGEGLQEIARLAQTAERQAEDIAQGTSANLAQLESLAQAVDQVHSDLADSERQTSRLSNAADELVDMAEASSERLAEVGLDSYHQRIFELARQGADAIGRRFEEDLAAGRITHDALFDRQYQPVPGSQPPKYRTRFDSYTDGVLPAIQEPLLEQHPGLVFVIACTPEGYVPTHNRAFSHALTGDLAVDTARSRSKRIFGDRTGKRCGSHQRRLLLQTYMRDTGEVMHDLSVPIMVNGRHWGGLRLGYRPDTTR
>NZ_CP018758.1|WP_058793483.1|2201198_2202167_+|sulfate-ABC-transporter-ATP-binding-protein
MSIEIQGINKRFGAFQALKDINLHIESGELVALLGPSGCGKTTLLRIIAGLESPDTGNIGFYGEDVSRRDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPRRERPSEAQIASKVHELLSMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLARLHDEIHLTSVFVTHDQEEAMEVADRIVVMNKGQIEQVGSPGEVYEQPASDFVYHFLGDSNRLALGEQEVLFRPHEVELEREARPGYHAAEVRDIRPLGAITRVTLRVPEQAEMIEVELVKDHPALIGLQRGTPLHFLPRTP
>NZ_CP018758.1|WP_058764880.1|2200325_2201192_+|sulfate-ABC-transporter-permease-subunit-CysW
MSLTSSTKADARARVQRTPVAIALIASAWLIFLLILVLPLYMVLTQGLAEGLGVFWDAISEPDAISALKLTLLATAISVPLNLVFGLAAAWCVTKFEFTGKSLLITLIDLPFSVSPVIAGLIYVLLFGAQGLLGPYLQSVNVQIVFAVPGIVLATIFVTFPYVARELIPLMQEQGTQEEEAARLLGASGWQLFWHVTLPNVKWALIYGVVLCTARAMGEFGAVSVVSGHIRGLTNTLPLHIEILYNEYNIVAAFSVAILLLMMALVILLLRQWSESHLSRELQHRDEE
>NZ_CP018758.1|WP_058764882.1|2199502_2200315_+|sulfate-ABC-transporter-permease-subunit-CysT
MSRRLSPVIPGFGLTLGFTLSYLALIVLIPLGAMFLHASQLTLGQFWSLITGRQVLAALQLSFGTALLAAFINGILGTLLAWVLVRYEFPGRKLIDAMVDLPFALPTAVAGIALTALYAPNGLIGSLFPFKIAYTPIGITLALIFVTLPFVVRTLQPVLADIPKEIEEAATCLGARPWQVFRYVLVPTLLPAWLTGFALAFARGVGEYGSVVFIAGNIPFKTEILPLLIVSKLDQYDYTGATGIGVFMLLVSFVMLLLINLLQRRIQPNI
>NZ_CP018758.1|WP_074528546.1|2198395_2199397_+|sulfate-ABC-transporter-substrate-binding-protein
MSIRRFALAALAGALFASSAHAVELLNVSYDPTRELYQQYNAAFIKHWKAETGEDLTINTSHGGSGKQARAVIDGLQADVVTLALSGDIDALNTHGQLIDPNWQQRLPDNSTPYTSTIVFLVRKGNPKHIKDWDDLVKKGVEVITPNPKTSGGARWNFLAAWAYAKTRYGSDAEALKFVTELYRHAPVLDTGARGATISFVQRQLGDVLIAWENEAYLALKEEGGDQLEIVTPSLSILAEPPVAWVDKVVERKGTLKQAKAYLEYLYSPEGQRIAAQNFYRPRDPKVAAEFKDQFRPVKLVTIEQEFGGWKSAQPKYFADGGVFDNIFTEINQ
>NZ_CP018758.1|WP_058767369.1|2198132_2198318_+|sulfur-starvation-response-protein-OscA
MSSVPFRSLENQDETALLRDIQQALRGLRFGAIEITVHNGQVVQIERKEKFRPQTGHSNKH
>NZ_CP018758.1|WP_058764888.1|2196693_2197881_-|aminotransferase
MSYNGLLDLTVWQLVVVTLVLTHLTIVSVTVYLHRYSAHRSLELHPALKHAFRFWLWLTTAMNTREWTAIHRKHHAKCETEDDPHSPVHKGLSTVMRKGAELYKAEASNAETLRIYGKNCPDDWVERNLYSRHRNLGVGLMLLIDLALFGALGLTVWAVQMIWIPFWAAGVVNGLGHALGYRNFECRDAATNLVPWGILIGGEELHNNHHTYPNSAKLSVKRWEFDMGWAWIKLFTWLRLAKVNRIAPIAHRVEGKGQLDMDTAMAILNNRFQIMAQYRKQVIGPLLRQERVSAAPSQRPLFRRARSLLARETSLLKTRHKVRIDELLEHSQALKLIYEKRLALQQIWARTSANGHDMLAATRQWIGEAEASGIHSLREFAEQLKTYSLRPAGTA
>NZ_CP018758.1|WP_058764891.1|2195601_2196579_-|sensor-domain-containing-diguanylate-cyclase
MDEQPSLSALPTPEENLLALLHSRAEADRLRDREQLFSALLESVNAVLWALDWRTRQIIYVSPAYAQIFGRSQSLVLSDYSTWLNNIYPDDLEYAQRTLEQVIEQGAVESREYRIIRADGEIRWLSDKCFVSQRSEAGMPLLVVGIAEDITDKKRMEEELQRLATTDVLTRSSNRRHFFESAQRAFEFAQSEGEPLAFLLLDIDDFKKINDRFGHQMGDQVLQRVAECGVQTTRRGDLFGRIGGEEFALLLPGCDADLALQIGSRLQRAVRQLAVPTTDGPLKVTISQGLAVLREGDVSLDTLYVRADEAMYQAKRQGKDQIVHG
>NZ_CP018758.1|WP_074528550.1|2209751_2210687_+|restriction-endonuclease
MSVPTYDQFIEPILRFLAAHPEGATAGEAHEAAAQALGLSEEQRQETIASGQPTYKNRSGWAHDRLKRAGYSSSAKRGYWQLTDSGRVFAQANPTPLSHEQVEHLALNFISVQLKPAPDATSLDEGNDTPAPLVQADLATSSPQERLNQAILELRTSVAGDLLDSLLQASPMRFEHIVLDVLHRLGYGANRQALQQVGGSGDGGIDGVISLDALGLEKVYVQAKRWQGTVGRPDLQAFYGALAGQKAKRGVFITTSGFTAQAVDFARSVEGLVLVDGKRLVDLMLDHEVGVTSQLYKVPRLDSDYFDESLS
>NZ_CP018758.1|WP_058788194.1|2210851_2211238_+|hypothetical-protein
MKSLIPLLLLPLALGACTKEQGRPDDLSLPSCDLAQQRALPGELGGSITDPLQAHISMRANVLQADVSTARIARRISQQQANQFSERIAQVRQRSDDFVKQQGFLSAAERVSFDRAFDEIAEQICRRP
>NZ_CP018758.1|WP_058764866.1|2211394_2211712_+|quaternary-ammonium-compound-efflux-SMR-transporter-SugE
MAWIYLVCAGLLEVVWAFSMKQSAGFSRLTPTVITLVAMVASVALLSISMRSLPLGTAYTIWTGIGAVGAFVVGILVLGEAASPLRILAAALIVSGLVLMKLSSS
>NZ_CP018758.1|WP_074528551.1|2211724_2212210_-|hypothetical-protein
MSKPLWRALLRPRTLLAFAAALLLASAWGSLVQTQYNLAALQGLGLPIDAATRWQTSLQDLLGFGPVYAAIVLAAWLPAFAAAFWLGRRKGAYRACLLPLAASVSLIAAIRLIDAFAPMPVLIYATRTLDGLLAMAVGGLVGGLLFIWLTRPAADRAGVLR
>NZ_CP018758.1|WP_074528552.1|2212318_2213401_+|PQQ-dependent-sugar-dehydrogenase
MIVLGVPLATAAPAYRIETVATGLARPWSLAFLPDGRALVTEGVGRLRVLVPDDQGRLSLQAEAVSGLPALYSEGQAGLFEVLPDPDFANNQLLYLSYASGTREANHLQVVRARLDGRRLQDVQTLFTSQPAKPFGQHFGARMALLGDGTLAITLGDGNVERTDAQRLDTHLGKIVRITRDGGVPADNPFADRPGALPEIYSLGHRNPQGLVWVAEHQALYQHEHGSKGGDELNLIRAGANYGWPLTTGGVDYTGARISPFRELPGITPPLLEWTPSIAPAGMTWYDGTGFPAWRGSLFVAALREKSVRRIPLLDGKPGQQELLFQELDQRLRDVRSGPDGTLWLLTDGEEGQVLRVVPG
>NZ_CP018758.1|WP_058772386.1|2213741_2214815_+|NAD(P)-binding-domain-containing-protein
MKVTLLGAGHIGYTISQLLHASGDYQVTVADRDERALAAIAALGVRTRTLDTADAAALTAALDDQDVVLNALPYHLAIPVAQAAKATNTHYFDLTEDVKATKTIRQLAEGASNAFMPQCGLAPGFIGIAAHSLAKRFDSVREVKMRVGALPEFPTNALKYNLTWSVDGLVNEYCHPCEAVRNGELQLVQPLEGLEHFSLDGVEYEAFNTSGGLGTLCETLQGQVETLDYKTVRYPGHRDLMKFLLEDLRLAGDQEQLKGILRGAVPTTMQDVVLVFVTVSGMRDGKLVQDVFSRKIFAAERDGRLTSAIQITTAAGICTALDLFREGKLPQRGFIAQEQVDMDAFLANRFGKAYQPA
>NZ_CP018758.1|WP_074528553.1|2214881_2215823_+|Gfo/Idh/MocA-family-oxidoreductase
MLSVAIVGCEQIHAQDYLETSLADPRIRVVAVASERDPARAQRLAAPHGLPVLDDFGRLPEVDLAFVTTAIDDHEAAVTALLPRARHLFVEKPLAVSAERATALAERIAGRSFFSGFYLRTDPALQQLRQLARDGAIGTLTHLSLTAGHPGLLEGWLSEWPAHLDEARMGYGAFGDLAVHLLDFSAWLTDQPLTVEHCRLERDPRWPLDHGGEALLHAGALPIHLRASAILRGPRLAIRLDGSSGTLELSAGQLLLHDAHGNRQLLSEGVDPGVPQGAQAVFDQLLGQERPELATLDAALAANHLLDYLYGRR
>NZ_CP018758.1|WP_058776751.1|2215943_2217584_+|methyl-accepting-chemotaxis-protein
MVWFNNLALAKKLAIAFGLCTLITLGIGAAGMSGLHSLNALLDSVLNNNLRSITQLNDSKSNVIGHNRDLFRLVSMAYANAPQADQERILDSLRANQAEAEKPFADYRATPLEADEKAAGDDFERDWKAYLAGVDSVLARLAAKDPSAAYQLLNDQVQPLYRKTMASFKIMVNSNKRQGSESGALAVTAYHQALWTLGGGIVLAVVCALVLGIVITRLIVTPIRQAVTSAERVAQGDLTQTIQSTRRDEAGQLLQALGGMQRSLKDTVQQMASAASQLAAAAEELHAVTEETSRGQVRQHDEVQQAATAVNQMTAAVEEVARNAASTSTASQETSREAQLGREQVQQAAQAMAVMTTEITDSTHKVQTLEGQVREIGQVLEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQGSTGEIERMMSAVRGSAEEAVSAMHKSQTLADDTQQRANRAGEALERITAGVARIEERNLVIASAAEEQAQVAREVDRNLVNIQDLSTQTATGAQQTAASSQELSRLATSFQGLVAQFRY
>NZ_CP018758.1|WP_058764853.1|2217749_2218004_+|hypothetical-protein
MRFTYDARRSYRLIGLDDGRLAGQLLGGQLYIMVAGDGTQPTSYAQLEDDQLRTSEGDLIGCREADILTLQRTGIALRLEPLDP
>NZ_CP018758.1|WP_058764851.1|2218251_2219145_+|SDR-family-oxidoreductase
MSRDNQYAMQNPLTQYPQPEFPKQSQEAPGLAQVMQPRPDHGETSYQGFGRLAGRKALITGADSGIGRATAIAYAREGADLVLNYLPEEEADAQEVVKLVEAEGRQAFCLPGDLKDEAFCNQLVSKAKDALGGLDILVNVAGKQTAVPDIAELTTEQFDATFKTNVYALFWLCKAALPHLPAGATIINTTSIQATQPSEFLLDYAATKAAITNFTKALAKQVAAKGIRVNAVAPGPFWTPLQPSGGQPQEKIPSFGGETVFKRPGQPAELAPLYVLLASQESSYVTGEVYGATGGMG

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Crispr_ID: NZ_CP018758_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_5

2322560-2322652

Orphan

Consensus_repeat	Method
TGAGGCAGCTCCATCGCCGAAGCCCAACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018758_5

>merge|NZ_CP018758|5|2322560-2322652|CRISPRCasFinder
TGAGGCAGCTCCATCGCCGAAGCCCAACAGCACCCCGCCCCACCAAGCGCCGTAGGTTGGCGCTGAGGCAGCTCCACCGCCGAAGCCCAACAG

>NZ_CP018758|5|5|2322560-2322652|CRISPRCasFinder
TGAGGCAGCTCCATCGCCGAAGCCCAACAG	CACCCCGCCCCACCAAGCGCCGTAGGTTGGCGC
TGAGGCAGCTCCACCGCCGAAGCCCAACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_074528603.1\|2320307_2320613_+\|urease-subunit-beta	unknown	unknown	gnl\|CDD\|237303
NZ_CP018758.1\|WP_074528606.1\|2323406_2324813_-\|L-cystine-transporter	unknown	unknown	gnl\|CDD\|224736
NZ_CP018758.1\|WP_074528598.1\|2312406_2313222_-\|ethanolamine-ammonia-lyase-subunit-EutC	unknown	unknown	gnl\|CDD\|235482
NZ_CP018758.1\|WP_074528605.1\|2322721_2323249_+\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP018758.1\|WP_074528609.1\|2330437_2331094_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380064
NZ_CP018758.1\|WP_058760480.1\|2331164_2333066_-\|TIM-barrel-protein	unknown	unknown	gnl\|CDD\|225726
NZ_CP018758.1\|WP_007162996.1\|2319488_2319791_+\|urease-subunit-gamma	unknown	unknown	gnl\|CDD\|183913
NZ_CP018758.1\|WP_058760473.1\|2325446_2325995_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|182585
NZ_CP018758.1\|WP_074528607.1\|2327638_2328226_+\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|129813
NZ_CP018758.1\|WP_074528602.1\|2319801_2320311_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP018758.1\|WP_074528600.1\|2316457_2317498_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP018758.1\|WP_058768975.1\|2314753_2316118_-\|ethanolamine-permease	unknown	unknown	gnl\|CDD\|129986
NZ_CP018758.1\|WP_058760474.1\|2326855_2327305_-\|azurin	unknown	unknown	gnl\|CDD\|259989
NZ_CP018758.1\|WP_074528601.1\|2318566_2319406_+\|urease-accessory-protein-UreD	unknown	unknown	gnl\|CDD\|223899
NZ_CP018758.1\|WP_074528608.1\|2329220_2330078_+\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|187613
NZ_CP018758.1\|WP_074528597.1\|2311935_2312370_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP018758.1\|WP_074528604.1\|2320779_2322480_+\|urease-subunit-alpha	unknown	unknown	gnl\|CDD\|237305
NZ_CP018758.1\|WP_058773443.1\|2328314_2329172_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187613
NZ_CP018758.1\|WP_058760472.1\|2325034_2325364_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528599.1\|2313338_2314730_-\|ethanolamine-ammonia-lyase-subunit-EutB	unknown	unknown	gnl\|CDD\|237897

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_074528603.1\|2320307_2320613_+\|urease-subunit-beta	gnl\|CDD\|237303	PRK13203, ureB, urease subunit beta; Reviewed.	1.44627e-72
NZ_CP018758.1\|WP_074528606.1\|2323406_2324813_-\|L-cystine-transporter	gnl\|CDD\|224736	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only].	0
NZ_CP018758.1\|WP_074528598.1\|2312406_2313222_-\|ethanolamine-ammonia-lyase-subunit-EutC	gnl\|CDD\|235482	PRK05465, PRK05465, ethanolamine ammonia-lyase subunit EutC.	1.13437e-136
NZ_CP018758.1\|WP_074528605.1\|2322721_2323249_+\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	7.78518e-25
NZ_CP018758.1\|WP_074528609.1\|2330437_2331094_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380064	pfam17938, TetR_C_29, Tetracyclin repressor-like, C-terminal domain. This domain is found in the C-terminal region of putative TetR-family regulatory proteins.	5.52738e-54
NZ_CP018758.1\|WP_058760480.1\|2331164_2333066_-\|TIM-barrel-protein	gnl\|CDD\|225726	COG3185, COG3185, 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only].	8.39548e-141
NZ_CP018758.1\|WP_007162996.1\|2319488_2319791_+\|urease-subunit-gamma	gnl\|CDD\|183913	PRK13241, ureA, urease subunit gamma; Provisional.	6.40898e-71
NZ_CP018758.1\|WP_058760473.1\|2325446_2325995_+\|glutathione-peroxidase	gnl\|CDD\|182585	PRK10606, btuE, putative glutathione peroxidase; Provisional.	4.00915e-86
NZ_CP018758.1\|WP_074528607.1\|2327638_2328226_+\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	7.07551e-61
NZ_CP018758.1\|WP_074528602.1\|2319801_2320311_+\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	1.48989e-76
NZ_CP018758.1\|WP_074528600.1\|2316457_2317498_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	1.73483e-43
NZ_CP018758.1\|WP_058768975.1\|2314753_2316118_-\|ethanolamine-permease	gnl\|CDD\|129986	TIGR00908, putative_ethanolamine_permease, ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines].	1.13583e-170
NZ_CP018758.1\|WP_058760474.1\|2326855_2327305_-\|azurin	gnl\|CDD\|259989	cd13922, Azurin, Azurin is a redox partner for enzymes such as nitrite reductase or arsenite oxidase. Azurin is a bacterial blue copper-binding protein. It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The copper of Azurin is tetrahedrally coordinated by a cysteine, 2 histidines, and a methionine residue. The electron transfer reactions are carried out with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. Azurin can function as a tumor suppressor; it forms a complex with p53 that triggers apoptosis in various human cancer cells.	2.6319e-75
NZ_CP018758.1\|WP_074528601.1\|2318566_2319406_+\|urease-accessory-protein-UreD	gnl\|CDD\|223899	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones].	1.07806e-81
NZ_CP018758.1\|WP_074528608.1\|2329220_2330078_+\|glucose-1-dehydrogenase	gnl\|CDD\|187613	cd05355, SDR_c1, classical (c) SDR, subgroup 1. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	7.08431e-144
NZ_CP018758.1\|WP_074528597.1\|2311935_2312370_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.63676e-10
NZ_CP018758.1\|WP_074528604.1\|2320779_2322480_+\|urease-subunit-alpha	gnl\|CDD\|237305	PRK13207, ureC, urease subunit alpha; Reviewed.	0
NZ_CP018758.1\|WP_058773443.1\|2328314_2329172_+\|SDR-family-oxidoreductase	gnl\|CDD\|187613	cd05355, SDR_c1, classical (c) SDR, subgroup 1. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.54078e-149
NZ_CP018758.1\|WP_074528599.1\|2313338_2314730_-\|ethanolamine-ammonia-lyase-subunit-EutB	gnl\|CDD\|237897	PRK15067, PRK15067, ethanolamine ammonia-lyase subunit EutB.	0

>NZ_CP018758.1|WP_074528604.1|2320779_2322480_+|urease-subunit-alpha
MKISRQAYADMFGPTTGDRVRLADTELWIEVEEDHTVYGEEVKFGGGKVIRDGMGQSQLPAAEVVDTVITNALILDHWGIVKADVGLKQGRIHAIGKAGNPDIQPGVSVPIGAATEVIAGEGMILTAGGIDSHIHFICPQQIEEALMSGTTTMIGGGTGPATGTYATTVTPGPWHMAQMLKAADAFPMNIGFTGKGNASLPEPLEEQVRAGAIGLKLHEDWGTTPAAIDNCLAVADRFDIQVAIHTDTLNESGFVETTLGAFKGRTIHTYHTEGAGGGHAPDIIKACGFPNVLPSSTNPTRPFTKNTIDEHLDMLMVCHHLDPSIAEDVAFAESRIRRETIAAEDILHDLGAFAMISSDSQAMGRVGEVITRTWQTADKMKKQRGPLPEDGAGNDNFRVKRYIAKYTINPAITHGISHEVGSIEVGKFADLVLWRPAFFGVKPTLILKGGAIAASLMGDANASIPTPQPVHYRPMFGSYAGMLHDTSLTFISQAAFEAGVPEQLGLKKRIGVVKGCRTAQKSDLIHNGYLPTIEVDPQNYQVKADGQLLWCEPAEVLPMAQRYFLF
>NZ_CP018758.1|WP_074528603.1|2320307_2320613_+|urease-subunit-beta
MIPGEYQIQDGEIELNAGRRTLNLTVANSGDRPIQVGSHYHFHETNDALVFDRALARGMRLNIAAGTAVRFEPGQSREVELVELAGARTVYGFAGRVMGKL
>NZ_CP018758.1|WP_074528602.1|2319801_2320311_+|N-acetyltransferase
MSLIVRDATPADLPAVLAIYNDAVANTTAIWNDNLVDLANRQAWFDLRAEQGYPILVAENASGEVVGYSSFGDWRPFDGFRHTVEHSVYVRNDQRGQGIGPRLMTMLIERARACDKHVMVAAIESGNLASIRLHERLGFLTTGQMPQVGTKFGRWLDLTFMQLMLEQRP
>NZ_CP018758.1|WP_007162996.1|2319488_2319791_+|urease-subunit-gamma
MDLTPREKDKLLIFTAGLVAERRLARGVKLNYPEAMALISAALLEGARDGRTVAELMHYGTTLLTRDQVMEGVPEMIPEIQVEATFPDGTKLVTVHQPIA
>NZ_CP018758.1|WP_074528601.1|2318566_2319406_+|urease-accessory-protein-UreD
MTSALPPAIFTPAWPARLELAYARQGDWTRPTTRRHLGPLRVQKHLHAEGPEVCQHILVHPPGGIAGGDRLDIEVNVGETAWAQLTSPGAAKWYRADSAAYQQIDLRVAAGATLEWLPQETIVFSGAQAHLATRIELEGDARLCYWDIVALGRPASAERFAEGLFQAHLDVRRDSIPLWHERQRLIGADRLLDSPIGLAGQPVFATLLITGTLDADTLERCRELSLPVRGDLTQLPGLVVARCLAAETLQARAWLIEVWRLLRPALLGRAAVPPRIWST
>NZ_CP018758.1|WP_074528600.1|2316457_2317498_+|AraC-family-transcriptional-regulator
MSLAASGFAALTSPSRNLGVLSAAASGLDAVIASHGGDVDRIFGTAGIDPEQLQHPTLSLGLGNYCRVLEEAAAQSGCDNFGLHYGQQFKPQMLGLLGYVGLCSPTAEAALQNFAAAFPFHQHSTLIQLVDAGDCWRFDYQVRHGAIVARRQDAELTLGMVLNLLRHVLGPTWAPRAVQFEHPRPEGWHEHRRLFDAPVSFGHPCNAMLVPKADLRGRAMPDHDPLLLLVVQDAIRQLGQRLPQVELLEEVRASVRLALPLGEPSLETIAQRLDLSSSQLQRRLRDQGASFSALVEGVRRDLAQHYLRQRLPVTDLAPLLGYSETSAFSRAFRRWFQVSPRQWRQA
>NZ_CP018758.1|WP_058768975.1|2314753_2316118_-|ethanolamine-permease
MSNEKLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGVAGTLGFLITTLLVAVMYTCFIFSFTELTTAIPHAGGPFAYSRRAFGPVGGTIAGIATLIEFVFAPPAIAMAIGAYLNVQFPTLDPKLCAVAAYFIFMTLNIVGVSIAATFELVVTVLAVIELLIFMGVVAPGFSLVNFTSGGWAGQDQFSLAAVGGMFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPKAYIAGILTLVTLAIGVMIFAGGVGDWRALSNINDPLPQAMKGVVGNSSMWLHLLVGIGLFGLVASFHGIILGYSRQFFALARAGFLPHGLAKLSRFQTPHRAVLAGGVVGIAAIFSDGVVSLQGMTLTAAMITMSVFGAIVMYIMSMLSLFKLRRSEPHLERTFRAPGYPLVPAIALVLAVVCLIAMVWYNTVIACVFVVLMVIGALVCGLSRRQGNIAPDAAFGEA
>NZ_CP018758.1|WP_074528599.1|2313338_2314730_-|ethanolamine-ammonia-lyase-subunit-EutB
MSGFQHSVGGQTWRFADLKELLAKATPARSGDVLAGVAAGSDVERVAAQMALAEVPLKHFLSEAVIPYETDEVTRLILDSHDAQAFAPVAHLTVGGFRDWLLGPAADEVSLATLAPGLTPEMVAAVSKIMRIQDLILVAQKVRVVTRFRNTIGLRGRLSTRLQPNHPTDDPAGIAASVLDGLLYGNGDAVIGINPATDSTSGICELLKMLDAVIQRYEIPTQSCVLTHVTTSIAAIERGAPVDLVFQSIAGSQGANESFGISLALLQEGYEAGLSQGRGTLGDNLMYFETGQGSALSAGTHHGVDQQTCEVRAYAVARKFKPLLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGVPMGCDICYTNHAEADQDDMDMLLTLLGAAGINFIMGIPGSDDVMLNYQTTSFHDALYARQVLGLQPAPEFAAWLDRLGILRLEDGRFRLGEGLPAPFQRVLAQI
>NZ_CP018758.1|WP_074528598.1|2312406_2313222_-|ethanolamine-ammonia-lyase-subunit-EutC
MKDSDTARPDPWAELRRLTPARIALGRAGTSLPTAAQLDFQAAHAQARDAVHLAFDHEALREGLAAQGRETLVLKSAAPDRHTYLQRPDLGRKLSEESARELQAYAAEHPEGFDVAVVIADGLSALAVHRHALPFLERLADQAGADGWRWAPVTLVEQGRVAVGDEIGGLLKARLLVMLIGERPGLSSPDSLGLYFTYGPRPGLNDAYRNCISNVRLEGLAYGLAAHKLLYLMREADRRKLSGVQLKDEAEVPLLEGDEENARIGNFLTDH
>NZ_CP018758.1|WP_074528597.1|2311935_2312370_+|GNAT-family-N-acetyltransferase
MSPAHLEYRLTDEPREDLRDAIAAPLRQYNEDQVGPSGYRALVVTLTRAGIPLGGLWGYTSYGWLYVQLLAVDEGVRGQGAGRELLLRAEAEAISRGCHGAWLDTHEFQARGFYERLGYELFGELADYPPGFARYFLRKALTPA
>NZ_CP018758.1|WP_074528605.1|2322721_2323249_+|transposase
MHYRRSRAAGGIFFFTVNLNDRSSNLLVDHIGPLRGAIRQVKARHPFDILAMVVLPDHLHALWRLPEDDRDYPLRWNLIKADFSRQLPPLETVNLSRRLKRERGVWQRRYWEHQIRDEQDLQRHLDYIHCNPVKHGHARSAVEWPYSSIHRYVRAGVLPADWAGQGDEEWAVGER
>NZ_CP018758.1|WP_074528606.1|2323406_2324813_-|L-cystine-transporter
MNLPLVLNLVAFVVLLGLLARTRNTGWSLAVRVFLGLVLGVAFGLVLQLLYGHDAPVLKTSIGWFNLVGNGYVQLLQMSIMPLVFASILAAVARLREASSMGRISLLTLGTLLFTTAIAALVGVLVTWLFGLSAEGLVQGAQETARLTALQNSYVGKVADLSVPQLLLSFIPKNPFADLSGANPTSIISVVIFAAFLGVAALRLQRDDPVRGEKVLAGIDVLQAWVMKLVRLLLQLTPYGVLALMTKMVATASPQDVLKLGTFLIASYLGLAILFGVHALLLTLSGLSPARFFPKVWPVLSFAFTSRSSAATIPLNIEAQTERLGVPPAIASFAASFGATIGQNGCAGLYPAMLAVMVAPTLGINPFDPLWIATLVGIVTLSSAGVAGVGGGATFAALIVLPALGLPVTLVALLVSIEPLIDMGRTALNVNGAMTAGTLTARWMGQLDKAAYDRDDRAEAPAAPVGRG
>NZ_CP018758.1|WP_058760472.1|2325034_2325364_+|hypothetical-protein
MQRFAKLAASFALAAAVAGCTGTAMKTQNLDPSQYTVVGHGEGKATGLMILGFIPVQQNDRFVRAQNAAIKSRGGDALINTQVQENWFWAYVLSGFTTTVSGDVVKLKR
>NZ_CP018758.1|WP_058760473.1|2325446_2325995_+|glutathione-peroxidase
MTATLMKLPLQSIDGETLTLERYLGKVLLVVNVASKCGLTSQYEGLERLYEAQRERGLEVLGFPANDFKQQEPGSDAEIKEFCTLTYGVQFPLFAKLSVVGEDKHPLYDELTRAQPDATGDGPFRERMLSRGGSPNPKPEVLWNFEKFLIGRNGEVVGRFAPDVTADDPRLVEAIEVELAKG
>NZ_CP018758.1|WP_058760474.1|2326855_2327305_-|azurin
MKSKLFAAALFALGSTGAWAADVCSTQIEAGDQMTYSRASIQVPASCKTFTVELIHTGSLPKNVMGHNWVLTRSTDAAAVDAAGMNAGEAKGYLPEGDERIIAHTKMLGGGEKDSVTFDTSALEAGKEYTFFCSFPGHFGSMRGVLQRG
>NZ_CP018758.1|WP_074528607.1|2327638_2328226_+|TIGR00730-family-Rossman-fold-protein
MSLKAVCVFCGAKSGASPVFQEAAAQLGRTLAKRGLTLVYGGGKVGLMGVVADAALAAGGEVIGIIPQSLKTAELGHTGCTRLEVVDGMHARKARMAELADAFIALPGGLGTLEELFEVWTWGQLGYHAKPMGLLEVDGFYAQLEGFLDHLVAQGFVAGPHRAMLQVEDSPNALLDALVAWQPTVPPRWAEPAPR
>NZ_CP018758.1|WP_058773443.1|2328314_2329172_+|SDR-family-oxidoreductase
MTDFPKAPMPEQQQEVPGLQSRMNPLPDCGEQSYKGSGRLTGKKALITGGDSGIGRAVAIAFAREGADVAISYLDEHEDAEDTARLVREAGREALLLPGCLSKREQCLAVVDKTVAAFGRLDVLVNNAAFQMTHETLDEIPDDEWLYTFDVNITAMFRITQAAVKHMGKGGSIINTTSVNSDMPRPTLLAYATTKGAIANFTAGLAQLLGEKGIRANSVAPGPIWTPLIPSTMPPEQVKEFGGNTPLGRPGQPVELAPVYVMLASDESSYTSGARIAVTGGKPIL
>NZ_CP018758.1|WP_074528608.1|2329220_2330078_+|glucose-1-dehydrogenase
MTDHPKPPLKPQPQTFPGSEAHMDPRPDSGAETYRGSGRLKGKAALITGADSGIGRAVAIAFAREGADVAIAYLDEHEDAQETARLVTEAGRKAVLLPGDLAQRQTCLDVVQKSVEAFGRIDVLVNNAAFQQVRDSLDEISDEEWVHTFNVNIHAMFRITQAAVKHMPRGGSIINTASINADIAPPTLLAYSATKGAIANFTAGLAQLLGDQGIRANSVAPGPIWTPLIVSTMKPDEPEQFGGSTPLGRPGQPVELAPAYVLLASDEASYISGAMLPVTGGMPVL
>NZ_CP018758.1|WP_074528609.1|2330437_2331094_-|TetR/AcrR-family-transcriptional-regulator
MQDTPALAPTLRTPRKNNPEKTRQTILAAAVAEFADQGLSGARVDAIAERTHTSKRMIYYYFGSKEGLYLAVLEKLYSDVRATEAQLPLDSLAPLEAIRRLTEFTFEHHRSHDDFIRLVSIENIHRGHHLASSATINSLNLSALESIRRILERGEACGEVRAGLDAVDVHLLISAFCFFRVSNRHTFGLIHRVDLDDEDSVRRHKAMIGDAVVGYLKP
>NZ_CP018758.1|WP_058760480.1|2331164_2333066_-|TIM-barrel-protein
MLRSIATVSISGTLTEKLEAIAAAGFDGVEIFENDLLYSGASPREIRQRTQDLGLAITLFQPFRDFEGGRRERLQRNLDRAERKFDLMQELGTDLILVCSNTAADSLGDERLIADDLQLLAERAALRDLRIGYEALAWGRHVNTWQQVWRLVKEVDHPNLGVLLDSFHTLSIGGDPAGIAEIPGDKIFFVQMADAPLLQMDVLEWSRHFRCFPGQGEFDLGGFLAPILQTGYQGPLSLEIFNDGFRAAQTRATAADGLRSLLYLEEQTAARLQREETPAAAPLFAPPQAPRLEGTEFLEFAVDDAHGAELARWLGKLGFAQAGRHRSKNVKLLRQGEINLVLNAEPYSFGHNFFEAHGPSLCAMALRVPDSHAALERAQQYRAQPYRGLVGPNEREIPAVRAPDGSLIYLADRGADGRSLYDTDFDVSAGASGGLGLTHVDHVAIALPADALDSWVLFYKSLFDFSADDEVVVPDPYGLVKSRALKNREGNVRLALNISESRNTAIARALSSYRGSGVHHIAFACQDIFQAVEQAKAAGVPLLEIPMNYYDDLGARFDFDDDFLSRLAYYNVLYDRDAQGGELFHVYTESFADRFFFEILQRKDYSGYGAANSPVRLAAMLQARQGRPAPAEF

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Crispr_ID: NZ_CP018758_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_6

2881228-2881318

Orphan

Consensus_repeat	Method
CCCCCTCTCTCCCTGGGAGAGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018758_6

>merge|NZ_CP018758|6|2881228-2881318|CRISPRCasFinder
CCCCCTCTCTCCCTGGGAGAGGGCTGGAGTGAGGGGAAACCCTGCCGCCCACTCGTGCCCCGCTCTGCCCCCTCTCCCCCTGGGAGAGGGC

>NZ_CP018758|6|6|2881228-2881318|CRISPRCasFinder
CCCCCTCTCTCCCTGGGAGAGGGC	TGGAGTGAGGGGAAACCCTGCCGCCCACTCGTGCCCCGCTCTG
CCCCCTCTCCCCCTGGGAGAGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_074528853.1\|2871176_2871728_+\|damage-inducible-protein-DinB	unknown	unknown	gnl\|CDD\|225200
NZ_CP018758.1\|WP_074528857.1\|2878337_2879888_+\|phospholipase-D-family-protein	unknown	unknown	gnl\|CDD\|197212
NZ_CP018758.1\|WP_058761640.1\|2889660_2889975_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP018758.1\|WP_058761638.1\|2888527_2889100_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181705
NZ_CP018758.1\|WP_058779762.1\|2884796_2885909_+\|curlin	unknown	unknown	gnl\|CDD\|182242
NZ_CP018758.1\|WP_058761632.1\|2882539_2883265_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|273783
NZ_CP018758.1\|WP_058767216.1\|2877060_2878341_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP018758.1\|WP_058761630.1\|2880163_2881213_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP018758.1\|WP_058761626.1\|2875655_2876144_+\|AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183009
NZ_CP018758.1\|WP_058761639.1\|2889103_2889508_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|223799
NZ_CP018758.1\|WP_058761624.1\|2873868_2874225_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100007
NZ_CP018758.1\|WP_074528858.1\|2881356_2882532_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP018758.1\|WP_058779761.1\|2884048_2884720_+\|dethiobiotin-synthase	unknown	unknown	gnl\|CDD\|234625
NZ_CP018758.1\|WP_058761622.1\|2872005_2872560_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|182158
NZ_CP018758.1\|WP_074528860.1\|2883245_2884043_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|273953
NZ_CP018758.1\|WP_058767215.1\|2876215_2877025_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP018758.1\|WP_058761625.1\|2874199_2875498_-\|D-amino-acid-dehydrogenase	unknown	unknown	gnl\|CDD\|234819
NZ_CP018758.1\|WP_074528862.1\|2886310_2888359_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP018758.1\|WP_058761636.1\|2885998_2886265_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074528855.1\|2872707_2873778_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|143500

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_074528853.1\|2871176_2871728_+\|damage-inducible-protein-DinB	gnl\|CDD\|225200	COG2318, DinB, Uncharacterized protein conserved in bacteria [Function unknown].	1.79261e-27
NZ_CP018758.1\|WP_074528857.1\|2878337_2879888_+\|phospholipase-D-family-protein	gnl\|CDD\|197212	cd09113, PLDc_ymdC_like_2, Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins. Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins. In Escherichia coli, there are two genes, f413 (ybhO) and o493 (ymdC), which are homologous to gene cls that encodes the Escherichia coli cardiolipin (CL) synthase. The prototype of this subfamily is an uncharacterized protein ymdC specified by the o493 (ymdC) gene. Although the functional characterization of ymdC and similar proteins remains unknown, members of this subfamily show high sequence homology to bacterial CL synthases, which catalyze the reversible phosphatidyl group transfer between two phosphatidylglycerol molecules to form CL and glycerol. Moreover, ymdC and its similar proteins contain two HKD motifs (H-x-K-x(4)-D, where x represents any amino acid residue) that characteriszes the phospholipase D (PLD) superfamily. The two motifs may be part of the active site and may be involved in phosphatidyl group transfer.	5.60898e-83
NZ_CP018758.1\|WP_058761640.1\|2889660_2889975_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	2.37973e-05
NZ_CP018758.1\|WP_058779762.1\|2884796_2885909_+\|curlin	gnl\|CDD\|182242	PRK10101, csgB, curlin minor subunit CsgB; Provisional.	0.000293052
NZ_CP018758.1\|WP_058761632.1\|2882539_2883265_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|273783	TIGR01738, Pimeloyl-_methyl_ester_esterase, pimelyl-[acyl-carrier protein] methyl ester esterase. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam00561). Members of this family are restricted to the Proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin].	9.93609e-34
NZ_CP018758.1\|WP_058767216.1\|2877060_2878341_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	2.4761e-72
NZ_CP018758.1\|WP_058761630.1\|2880163_2881213_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP018758.1\|WP_058761626.1\|2875655_2876144_+\|AsnC-family-transcriptional-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	1.78176e-69
NZ_CP018758.1\|WP_058761639.1\|2889103_2889508_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	1.08516e-06
NZ_CP018758.1\|WP_058761624.1\|2873868_2874225_-\|RidA-family-protein	gnl\|CDD\|100007	cd06150, YjgF_YER057c_UK114_like_2, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	1.39323e-51
NZ_CP018758.1\|WP_074528858.1\|2881356_2882532_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP018758.1\|WP_058779761.1\|2884048_2884720_+\|dethiobiotin-synthase	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	1.59795e-86
NZ_CP018758.1\|WP_058761622.1\|2872005_2872560_-\|cupin-domain-containing-protein	gnl\|CDD\|182158	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR.	1.44126e-59
NZ_CP018758.1\|WP_074528860.1\|2883245_2884043_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|273953	TIGR02072, Malonyl-_O-methyltransferase, malonyl-acyl carrier protein O-methyltransferase BioC. This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, carries out an enzymatic step prior to the formation of pimeloyl-CoA, namely O-methylation of the malonyl group preferentially while on acyl carrier protein. The enzyme is recognizable as a methyltransferase by homology. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin].	1.44706e-87
NZ_CP018758.1\|WP_058767215.1\|2876215_2877025_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.68677e-13
NZ_CP018758.1\|WP_058761625.1\|2874199_2875498_-\|D-amino-acid-dehydrogenase	gnl\|CDD\|234819	PRK00711, PRK00711, D-amino acid dehydrogenase.	0
NZ_CP018758.1\|WP_074528862.1\|2886310_2888359_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.10668e-62
NZ_CP018758.1\|WP_058761638.1\|2888527_2889100_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|181705	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated.	8.34807e-121
NZ_CP018758.1\|WP_074528855.1\|2872707_2873778_-\|alanine-racemase	gnl\|CDD\|143500	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases. This subfamily is composed mainly of proteobacterial alanine racemases (EC 5.1.1.1), fold type III PLP-dependent enzymes that catalyze the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. hese proteins are similar to other bacterial ARs and are fold type III PLP-dependent enzymes containing contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	0

>NZ_CP018758.1|WP_058761630.1|2880163_2881213_+|biotin-synthase-BioB
MSATALRHDWTLAEVRALFQQPFNDLLFQAQSVHRQHFDPNRVQVSTLLSIKTGACPEDCKYCPQSGHYNTGLEKEKLMEVQKVLEAAAEAKAIGSTRFCMGAAWKHPSAKDMPYVLQMVQGVKALGLETCMTLGRLDQEQTRALADAGLDYYNHNLDTSPEFYGNIITTRTYGERLQTLAYVREAGMKICSGGILGMGESVDDRAGLLIQLANLPEHPESVPINMLVKVQGTPLAEEKDVDPFDFIRTLAVARILMPKSHVRLSAGREQMNEQMQSLAFLAGANSIFYGEKLLTTGNPQADKDMQLFARLGIQPEAREEHADEVHQAAIEQALVEQRNSELFYDAATA
>NZ_CP018758.1|WP_074528857.1|2878337_2879888_+|phospholipase-D-family-protein
MIRLLVPLLLALLAGCATPIPRTASQVLPATGTALDTEVRAAGASHPGLSGLRLLETSTDAFTARAELIRKAQRSLDIQYYIVHDGLTTRLLVNELLKAADRGVRIRFLIDDTSSDGNDYQIAVLAAHPNVQIRVFNPLHLGRSTGPTRALGRLMDLNQQHRRMHNKLWLADDSVAIVGGRNLGDEYFDARPEMNFTDLDLLAAGPVARQLGTSFDQYWNSPLSQPARRLRWFKPSAGALVRLRARLHDYLDSERTHNLALYNRLRRYATAPQLDNWLRGLTWAPAQAFWDAPRKVLAEDEPDWQLLLTHQLQPVMDGAQHELLLMSSYFVPMDQGVSYLGGLAARGVDVRVLTNALEATDVPAVHAGYAPYRTALLAEGVKLYELRARPDQQRSALPYRFGESESSLHSKALAIDGHWSFIGSFNFDPRSVLWNTEVGILVDSPALTGRLRQLMLQGMDPSVSYTVKRVEDRGQAHLEWVTERDGQPRVLHHEPGSAWRRFNAWVVKAVGLERLL
>NZ_CP018758.1|WP_058767216.1|2877060_2878341_+|FAD-binding-oxidoreductase
MQPHAPSYYAATANQTLSFPLLEGEVQADVCVVGGGFSGLNTALELAERGARVVLLEARRIGWGASGRNGGQLIRGVGHDVEQFEPVVGAEGVRELKRLGFEAVDLVRQRIARHGIQCDLTWGFADLANKPRHWQHLQEEHASLQALGYPHALRLVPKTQLAEVIGSERYQGALVDEGSGHLHPLNLALGEAAAAHALGVQIFEDSQVTRLEYGPKVRVHTARGRVSADTLVLCCNAYLDDLQPELSAQILPAGSYVIATEPLSAERAARLLPGNRAVCDQNVAVDYFRLSADRRLLFGGACHYSGRDPQDIAGYMRPKMLAVFPELADVRVDYAWGGMIGIGANRLPQIGRLREHPNVFHAQAYAGHGVNATHLAGHLLAEAILAQSAGFDLFAQVPHARFPGGRHLRSPLLALGMLWYRLKDLL
>NZ_CP018758.1|WP_058767215.1|2876215_2877025_+|class-I-SAM-dependent-methyltransferase
MDPHERQRITAANRQAWELSAPLHAQGEEWADLLRHARQPGFSVLDDCLTRTLTELDIRGLSCAQVGCNNARELLSLAALGGQPALGIDQSTAFLAQGQQLAAAAGLAPALVAADIYALPDGLGQHDLVLITIGVLGWMPDLPAFFAAVHDLLAPGGRLVIYETHPFLEIFEPQADQPLLPHYSYFRREPLVLNDLIAYDGQDHGQGASSYWHIHTLGAIVSGCLQAGLVLRRLEEHPHSNREVDYDLYENQVAQLPMSFTLVAQRPTA
>NZ_CP018758.1|WP_058761626.1|2875655_2876144_+|AsnC-family-transcriptional-regulator
MRTHHQARRELDKIDRNILRILQEDGRISFTELGERVGLSTTPCTERVRRLEREGIIQGYNARLNPQHLRAGLLVFVELSLDYKSGDTFEEFRRAVLKLPQVLECHLVSGEFDYLVKARISEMASYRKLLGDILLKLPHVRESKSYIVMEEIKETLSLPVPD
>NZ_CP018758.1|WP_058761625.1|2874199_2875498_-|D-amino-acid-dehydrogenase
MRVLVLGSGVIGTTSAYYLARQGFEVVVVDRQAGPALETSHANAGQVSPGYASPWAAPGVPLKALKWLFQKHAPLAIRLTGDANQYLWMAQMLRNCTAARYAVNKERMVRLSEYSRDCLDELRQDTGIAYEGRQLGTTQLFRTQQQVEAAAKDIAVLERSGVPFELLDRDGVARVEPALAAVKHKLAGGLRLPNDQTGDCFLFTNRLAEEARRLGVEFRFGAQIEQLSASGDRIDGVKVDGELLTADHYVLALGSYSPQLLAPLGIRAPVYPLKGYSLTVPIVDASMAPTSTILDETYKVAITRFDDRIRVGGMAEICGFDLSLDPRRRATLEMITGDLYPRGGDLARATFWTGLRPTTPDGTPIVGATRYRNLFLNTGHGTLGWTMACGSGRLLADLIGRKRPQISAEGLDISRYSATQESPRNARTASAH
>NZ_CP018758.1|WP_058761624.1|2873868_2874225_-|RidA-family-protein
MPVQRLHTDRRLSEINIHNGTVYLAGQLADDFSGDIYQQTRETLANVDKFLAEAGSDKQHILVVTIFLRDIALHFEGMNRAWDEWVAQGATPGRTTVEAKLAKPDILVEMNVIAAVKA
>NZ_CP018758.1|WP_074528855.1|2872707_2873778_-|alanine-racemase
MRPARALIDLAALRHNYRLARELSDARALAVIKADAYGHGAVAVASALAGEADGFAVACIEEALELRAAGIRAPILLLEGFFTADELPLIVEHDLWTVIHADWQLEALERTALARPLQVWLKLDSGMHRVGFFPQDYAAAYRRLLASGKVSGIVKLTHFARADEPDSPATAAQIATFRAATEGLPGPTSLRNSPATLGWPQAAGDWVRPGLMLYGVSPFTAPQAAAERLQPVMTLTSRVIAVRELPAGEPVGYGARFVTERPTRVGVVALGYADGYPRHAPNDTPVAIDGRPGRLIGRVSMDMLTVDLSDHPQAGVGSEVEFWGRQVSVAALAERCGTIPYQLLCNLKRVPRHYQG
>NZ_CP018758.1|WP_058761622.1|2872005_2872560_-|cupin-domain-containing-protein
MDVGARLQTIRTLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLKKVLAGIPMSLVEFFSLDLEQDAPTQVVYRANELIDIASGAHTVRMRLVGRAHPSRALAFLDETYPPGADTGEEMYAHEGEEAGLVVEGRLELTVGGEVHILEPGDSYYFESSRPHRFRNPFDAPARLISATTPANF
>NZ_CP018758.1|WP_074528853.1|2871176_2871728_+|damage-inducible-protein-DinB
MTTALLLAQACNNRWSNHRLLTACATLTPEALQASQPAAFFGSLWALLGHLLDVDLFYLDALHDQPRPYRDHPWPDLATLMEAQAASDRRLITLCRALEPAQLTQLITLPRATGPVREQVERTLQHLFVHQLHHRGQAHALLLASGVAPPQLDEFFLAQDEPLRRAELELLGIDEEELWGTAL
>NZ_CP018758.1|WP_074528858.1|2881356_2882532_+|8-amino-7-oxononanoate-synthase
MAFDLAARLAQRHAAHLYRRRPLLDAPQGPAVVVDGETLLAFCSNDYLGLANHPALIAALRAGAERWGVGGGASHLVIGHSSPHHQVEEALAELTGRPRALLFSTGYMANLAAVTALVGRGDTVLEDRLNHASLLDAGLLSGARFARYLHNDPASLATRLAKAEGDTLVVTDGVFSMDGDLADLPDLCAVAQRHGAWTLVDDAHGIGTLGATGGGIVEHFGLDQSQVPVLVGTLGKACGTAGAFVAGSEELIETLIQFARPYIYTTSQPPAVACATLAALQLVREEGWRRELLHTLIQRFRRGATALGLDLMLSATPIQPILVGDSARALALSAALRRRGILVTAIRPPTVPAGSARLRVTLTAAHREAHVDLLLDALAQAMAELPPDADK
>NZ_CP018758.1|WP_058761632.1|2882539_2883265_+|alpha/beta-fold-hydrolase
MRDTLILLPGWGLGSAPLEPLRDELAEQAPFLDVLIEPLPALADTQDWFTDLEARIADGVWLAGWSLGGMLASEFTLRRPEGVHGLVTLASNACFVARAGWQTAMARSVFTDFFEACSLDADQTLRRFTLLVAQGARDSRTLARQLQVTLPEVDPEVVLAGLELLARLDTRAALQAFSGPQLHLFGAHDALVPATAAQALRDELPSAQVEVLEHASHGLPLERPDEVATRIREFIYAGRDG
>NZ_CP018758.1|WP_074528860.1|2883245_2884043_+|malonyl-ACP-O-methyltransferase-BioC
MQDEMADVLPDKRQVALSFSRAATQYDGAALLQRRVADGLLAWLPTLAPQRWLDLGSGTGYCSRALAQRHPHSEGLALDLATGMLRHARQQGAGAQHYLAADAEHLPLRDDSCDLILSSLALQWCADLPAVLAEARRSLRPGGVLAFSSLVVGTLDELRQSWAQVDDRVHVNRFRSQATYAEAAAASGLQVLTLEVAPERLHFPDLRALTQHLKAIGAHNLNQGRPQGLTGRQRLAAFTQAYEGLRQPAGLPATYQVIYVLLRKE
>NZ_CP018758.1|WP_058779761.1|2884048_2884720_+|dethiobiotin-synthase
MPAYFVTGTDTEIGKTTIAAGLLHRARQQGLATAGVKPVASGCERTAEGLRNGDALALLGETSLPLAYADINPIALEPAIAPHLAAREAGIDLSVASLAAPVRRILALGADFTLVEGAGGWRVPLAGRESLSDLARELGLPVILVVGVRLGCINHALLSAEAILADGLPLAGWVANLIAPATLRLDDNLATLHERLPAPCLGTVPNLAVATPAAVAAHLRLPG
>NZ_CP018758.1|WP_058779762.1|2884796_2885909_+|curlin
MPTAKFLTCLGLLGLTSTAWALDNQTLVDQRGDQLGAFLVQDADTRQGRLEVVQTGRASQAYLTQSASLGDRTRVEQGGLGNFANVTQAAGGAREVAIDQREANQSHAYVYQGHGQRNQVEIVQDGLLNEALVRQGGDDQRMLIEQAGARNGIELFQDGRDSGSRSRLKQVGDDHRQDVLSLGVRNEVDLLQGGAANQARVEQRGDDNYAGARQGARQQELRLIQTGDRNDARVQQNGLGDRPQRLSTVQRGDDNTAELLVTGAGNTLDLQQQGNRNTAGVLIGGDDARLTLVSTGNDNAFRANGDGDDIELSVTQLGDGHAFSASLLSAAQVEASQQGFGQRAVISQLSEGNSLSLRQSGQGNQATIQQ
>NZ_CP018758.1|WP_058761636.1|2885998_2886265_+|hypothetical-protein
MNVTSSNPLYAGMQAFQNGSRAVDKAGTALASQTARNQEQSLDATTNSQAKMASELVNLDVGKYQALAGSKVMQTAQETLGSLIDTKA
>NZ_CP018758.1|WP_074528862.1|2886310_2888359_-|methyl-accepting-chemotaxis-protein
MGALLTLGIGLLGRFSFARKFQLLFVLFLVPMGISLWLLGLDFKAKLDIVAGERAGVHVLQKLDAVETEVMARRNLAARWKAWAATNPTAAEQALAAMEARQAPREKAMAILSQRLAEEMPGREREQLLAQLKTALAGLDSASLRGLDAQQTYDRFTAALGAAQALREKVATDSGLILDPWLETYLLMQLGTDKAVDLSERLGRLESFGEPSVVAGNLSLQNRLELRDLRTRIGDSLVSMTKSGNLLQSQLPPEMVAWAQDYRKVQATLESSLKTLDAGVFGERITLSPADFESTLDGALGAMATFRSQVLAQLDSRLDYYGNQTVRNFTLVLVLFASLLLLTCYMLLCMQVSIRRGAAGITTLADSLRDGDLTQASEVAGRDELATISRSLNTAVVQLRQSLQGVDRETQQLGVASQQLGVQSGDALVAVEDQQQQITQIVTAANELAATAQGVAQSCEQAAGRAEQMRDISARSQQDSRQTTASIQQLNTRLSETATAMGQVSDQAGQIRQVVDVIRGIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRSLSQRTQASTAQIAGTVGSLSETVTQAVTLMREACGQAENDALAVTGLGRKLEEITQAVEGVSDTLTQIATAAEEQAVTADQVSGNIQQVDVAANRLLGNARQVQQAAEGLGRGSKTLAATTARFRLG
>NZ_CP018758.1|WP_058761638.1|2888527_2889100_+|xanthine-phosphoribosyltransferase
MELLKAKIRTEGQVLSEQVLKVDAFLNHQIDPLLMQAIGREFAQRFAAAGITKIVTIEASGIAPAVLTGLELGVPVIFARKHQSLTLTDHLLTASVYSFTKQTESTIAVSTTHLSADDRVLIIDDFLANGKAAKALISIINQAGAQVVGLGIVIEKAFQAGRAELDALGYRVESLARVASLADGQVTFAE
>NZ_CP018758.1|WP_058761639.1|2889103_2889508_+|YkgJ-family-cysteine-cluster-protein
MAQILRILGADLDRTETWIRYDKAMCLDCVSSCCTLPVEARLSDLIRMGVVDEFEKGEPLKDIAKRLKKDGIVERLNAKTGLFTLVRLSNNDCLYLHPKTRLCTIYDQRPETCRNHPRVGPRPGYCAYKPQKLR
>NZ_CP018758.1|WP_058761640.1|2889660_2889975_-|YkgJ-family-cysteine-cluster-protein
MSDIPLHDLTTPNVTCDSCQAWCCRQEVLLFDDPGVPARFIEEDWTGTRMKRLDDGWCAALDREQMNCSIYEVRPWVCRIFDMAGPECLEERADMARAMESGEF

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Crispr_ID: NZ_CP018758_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_7

3292353-3292474

Orphan

Consensus_repeat	Method
GGGCGGCCCTCACCCTAGCCCTCTCCCAGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018758_7

>merge|NZ_CP018758|7|3292353-3292474|CRISPRCasFinder
GGGCGGCCCTCACCCTAGCCCTCTCCCAGAGGGAGAGGGGACGATTGGGTGTGCTGGGGAATGTTTGTAGTCAGCCGATGGGTGCGGAGCTGGGCGGCCCTCACCCTCGCCCTCTCCCAGAG

>NZ_CP018758|7|7|3292353-3292474|CRISPRCasFinder
GGGCGGCCCTCACCCTAGCCCTCTCCCAGAG	GGAGAGGGGACGATTGGGTGTGCTGGGGAATGTTTGTAGTCAGCCGATGGGTGCGGAGCT
GGGCGGCCCTCACCCTCGCCCTCTCCCAGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_074529045.1\|3298432_3311722_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377410
NZ_CP018758.1\|WP_058763102.1\|3288253_3289717_-\|YdgA-family-protein	unknown	unknown	gnl\|CDD\|377603
NZ_CP018758.1\|WP_074529051.1\|3316991_3317306_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379124
NZ_CP018758.1\|WP_074529043.1\|3292561_3295258_-\|magnesium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|236705
NZ_CP018758.1\|WP_058763094.1\|3284783_3284993_+\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|227744
NZ_CP018758.1\|WP_058785386.1\|3295901_3296396_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP018758.1\|WP_058763096.1\|3285066_3285387_+\|DUF2388-domain-containing-protein	unknown	unknown	gnl\|CDD\|274137
NZ_CP018758.1\|WP_058763100.1\|3285823_3286144_+\|DUF2388-domain-containing-protein	unknown	unknown	gnl\|CDD\|274137
NZ_CP018758.1\|WP_074529047.1\|3313137_3313440_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074529044.1\|3296682_3298392_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP018758.1\|WP_058763098.1\|3285489_3285789_+\|DUF2388-domain-containing-protein	unknown	unknown	gnl\|CDD\|274137
NZ_CP018758.1\|WP_081323610.1\|3286140_3288102_+\|DUF4105-domain-containing-protein	unknown	unknown	gnl\|CDD\|379156
NZ_CP018758.1\|WP_058773760.1\|3291518_3292277_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP018758.1\|WP_074529840.1\|3290935_3291469_-\|DUF924-domain-containing-protein	unknown	unknown	gnl\|CDD\|377592
NZ_CP018758.1\|WP_157772830.1\|3312088_3313141_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372865
NZ_CP018758.1\|WP_157772831.1\|3315778_3316486_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377410
NZ_CP018758.1\|WP_074529041.1\|3283570_3284524_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|237004
NZ_CP018758.1\|WP_074529042.1\|3289984_3290650_+\|nucleoside/nucleotide-kinase-family-protein	unknown	unknown	gnl\|CDD\|236442
NZ_CP018758.1\|WP_081375605.1\|3316427_3316802_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_081375642.1\|3295469_3295985_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|198286

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_074529045.1\|3298432_3311722_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|377410	pfam04830, DUF637, Possible hemagglutinin (DUF637). This family represents a conserved region found in a bacterial protein which may be a hemagglutinin or hemolysin.	8.10338e-34
NZ_CP018758.1\|WP_058763102.1\|3288253_3289717_-\|YdgA-family-protein	gnl\|CDD\|377603	pfam06097, DUF945, Bacterial protein of unknown function (DUF945). This family consists of several hypothetical bacterial proteins of unknown function.	3.40775e-88
NZ_CP018758.1\|WP_074529051.1\|3316991_3317306_+\|hypothetical-protein	gnl\|CDD\|379124	pfam13332, Fil_haemagg_2, Haemagluttinin repeat.	1.44653e-05
NZ_CP018758.1\|WP_074529043.1\|3292561_3295258_-\|magnesium-translocating-P-type-ATPase	gnl\|CDD\|236705	PRK10517, PRK10517, magnesium-transporting P-type ATPase MgtA.	0
NZ_CP018758.1\|WP_058763094.1\|3284783_3284993_+\|DUF1127-domain-containing-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	1.81262e-07
NZ_CP018758.1\|WP_058785386.1\|3295901_3296396_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	9.03024e-12
NZ_CP018758.1\|WP_058763096.1\|3285066_3285387_+\|DUF2388-domain-containing-protein	gnl\|CDD\|274137	TIGR02448, conserved_hypothetical_protein, conserverd hypothetical protein. This family consists of small hypothetical proteins, about 100 amino acids in length. The family includes five members (three in tandem) in Pseudomonas aeruginosa PAO1, and also in Pseudomonas putida KT2440, four in Pseudomonas syringae DC3000, and single members in several other Proteobacteria. The function is unknown.	2.96091e-22
NZ_CP018758.1\|WP_058763100.1\|3285823_3286144_+\|DUF2388-domain-containing-protein	gnl\|CDD\|274137	TIGR02448, conserved_hypothetical_protein, conserverd hypothetical protein. This family consists of small hypothetical proteins, about 100 amino acids in length. The family includes five members (three in tandem) in Pseudomonas aeruginosa PAO1, and also in Pseudomonas putida KT2440, four in Pseudomonas syringae DC3000, and single members in several other Proteobacteria. The function is unknown.	6.84565e-24
NZ_CP018758.1\|WP_074529044.1\|3296682_3298392_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	3.20749e-143
NZ_CP018758.1\|WP_058763098.1\|3285489_3285789_+\|DUF2388-domain-containing-protein	gnl\|CDD\|274137	TIGR02448, conserved_hypothetical_protein, conserverd hypothetical protein. This family consists of small hypothetical proteins, about 100 amino acids in length. The family includes five members (three in tandem) in Pseudomonas aeruginosa PAO1, and also in Pseudomonas putida KT2440, four in Pseudomonas syringae DC3000, and single members in several other Proteobacteria. The function is unknown.	2.87512e-27
NZ_CP018758.1\|WP_081323610.1\|3286140_3288102_+\|DUF4105-domain-containing-protein	gnl\|CDD\|379156	pfam13387, DUF4105, Domain of unknown function (DUF4105). This is a family of uncharacterized bacterial proteins. There is a highly conserved histidine residue and a well-conserved NCT motif.	1.62015e-23
NZ_CP018758.1\|WP_058773760.1\|3291518_3292277_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.3112e-61
NZ_CP018758.1\|WP_074529840.1\|3290935_3291469_-\|DUF924-domain-containing-protein	gnl\|CDD\|377592	pfam06041, DUF924, Bacterial protein of unknown function (DUF924). This family consists of several hypothetical bacterial proteins of unknown function. Structurally, this family resembles TPR-like repeats.	2.61892e-75
NZ_CP018758.1\|WP_157772830.1\|3312088_3313141_+\|hypothetical-protein	gnl\|CDD\|372865	pfam13988, DUF4225, Protein of unknown function (DUF4225). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 182 and 282 amino acids in length.	0.000846234
NZ_CP018758.1\|WP_157772831.1\|3315778_3316486_+\|hypothetical-protein	gnl\|CDD\|377410	pfam04830, DUF637, Possible hemagglutinin (DUF637). This family represents a conserved region found in a bacterial protein which may be a hemagglutinin or hemolysin.	1.1921e-10
NZ_CP018758.1\|WP_074529041.1\|3283570_3284524_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|237004	PRK11863, PRK11863, N-acetyl-gamma-glutamyl-phosphate reductase; Provisional.	0
NZ_CP018758.1\|WP_074529042.1\|3289984_3290650_+\|nucleoside/nucleotide-kinase-family-protein	gnl\|CDD\|236442	PRK09270, PRK09270, nucleoside triphosphate hydrolase domain-containing protein; Reviewed.	1.95405e-89
NZ_CP018758.1\|WP_081375642.1\|3295469_3295985_-\|hypothetical-protein	gnl\|CDD\|198286	cd00299, GST_C_family, C-terminal, alpha helical domain of the Glutathione S-transferase family. Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Based on sequence similarity, different classes of GSTs have been identified, which display varying tissue distribution, substrate specificities and additional specific activities. In humans, GSTs display polymorphisms which may influence individual susceptibility to diseases such as cancer, arthritis, allergy and sclerosis. Some GST family members with non-GST functions include glutaredoxin 2, the CLIC subfamily of anion channels, prion protein Ure2p, crystallins, metaxins, stringent starvation protein A, and aminoacyl-tRNA synthetases.	2.11393e-09

>NZ_CP018758.1|WP_058773760.1|3291518_3292277_-|SDR-family-oxidoreductase
MTTARPIALVTGASQGIGRAVALGLLQDGFRVVLAARRLEPLEALVEEARQQGGEALAIPCDVTDAASVAALFDHIRATYGRLDLLFNNAGVGAPAVPIDELELDAWHRAVNTNLTGVFLCSRAAFALMREQSPRGGRIINNGSISAHTPRPFSAPYTATKHAVAGLTKALALDGRAFDIACGQIDIGNAATEMTERMANGVLQADGSTAVEPRMDVKHVADAVRYMASLPLDANVQTLTVMATKMPYVGRG
>NZ_CP018758.1|WP_074529840.1|3290935_3291469_-|DUF924-domain-containing-protein
MTPAAIVSFWQAAGRRQWFNGGPAFDTECRERFEAAHFAASRREFDSWADNAEGALALCLLLDQIPRNIFRHSGHAFATDALARHYAQQAIAAGLDLQIEPELRAFLYLPFEHSEALADQHRSLELFEALGIEHYRSYAQAHLDVIVRFGRFPHRNRALGRINTAEEQTWLDAGGGF
>NZ_CP018758.1|WP_074529042.1|3289984_3290650_+|nucleoside/nucleotide-kinase-family-protein
MSSQRPVEGLQLPAELLVRAEALLARGGRRLLGIAGTPGAGKSTVAELLAAALGERAVVVPMDGYHLANRELARLGRAQRKGAPDTFDARGYRALLQRLKDPVAGETVYAPLFNREIEEPIANAIPVHADTQLVISEGNYLLLTQAPWSDVAEVFDECWYVRVDPEERRERLVARHMHFGRSREAAEAWVASTDEPNARLIDGDRARADLVVEWRDGAGNG
>NZ_CP018758.1|WP_058763102.1|3288253_3289717_-|YdgA-family-protein
MKKPLLTTLAGLALVAVGIGVGGAWYTGGRLEAELRQAASQAQAVLQAERPEYHPQIQLVEFHRGLFSSTALFSLSMQPEDHAPMEVLRVTDEIQHGPFPLTRLKSLQLAPVMAVNRLTLVRTPLVDALFTLTKGAEPVRLDATLRYDRAVDGQLIVAPLQMDQPQGAIAFSGLNAGFRTDLEAQQFRLEGSVGHFSFNVRTPDGWTKMELQGLSLTGDNRRNADGFWLGPGALRLTGLVLAMPGQPEVQLQDLQLKSDTQQQGQQLSGTLDASLGRLAVAGQTLGKATLSAHYSHLDSPALAQLNALLQHLPLDTDEGLDPTTQATLQQRLSDVLAARPQLVVDDFRFDTPGGSNHLRFDLTLDKPTTYDLPPEQLGAQVLSQLNARLSVARSSLVDGVLFQAGAQREQPAVQQQAQATAEALANIGLNSGLLKAEGKDLVATLNYATGRLTLNGQEVPPEQLLALLQPPYTPAPPAKPQNKAPKR
>NZ_CP018758.1|WP_081323610.1|3286140_3288102_+|DUF4105-domain-containing-protein
MNGRAGRLWVWLAGLAAGLALGGAQAALRLELDTQGLTPAQVQATQHLLDEAQALLPPTFKTALDERIQVHWSDELLQEAYGEADRHTLQLNRRLLPSLVDGSDTRIQTGRPHGTQHRELLATVLHELTHFYDREQVWTPAQRQLILYCGGLDLTSDKLPLKCQGQAGRSYTLSDDPRLLDLAGWQVKTRKYGNRESKNLFVARSPDLYELTNPKEFVAVNMEYFLLDPSYACRRPGLQQYFAEHFGWSPPHDACPGRYPYLNAGNDFGEAPLGWLDPERVYAVDYLLAEGNEKVMSRWGHSMLRLVVCAPGRPRGPDCRLDLQYHLVLSFRAFVNDVQLSSWRGLTGSYPSRLFVLPLAQVVDEYTKVELRGLQSVPLKLTRPEIADFLERTAQVHWSYDGQYYFITNNCAVETFKLLHDGVPRLAAAQLDVITPTGLMDALRIKGLVDTSVLDDPREALRLGYRFDSFRERFQAMFKVAKERLNLPQPDVEAWLALTPEQRRAYFARADLRGSAALLLLEQAAYRRALLQAQTELKDRYLGEDAVDKARFGKAGNALEQILKDSGYLSRPAELLGTAGYGLPQPGEWQQLTAESQKRQAHLRSLRDTLNNEVRQLLSPEARDGLDLTEANLDLLGKHLRELNKASGGLELK
>NZ_CP018758.1|WP_058763100.1|3285823_3286144_+|DUF2388-domain-containing-protein
MRRSLLIAAALTLGVSSLAQAQTLVATSNIVVRALQRSIDFTSDTTTSIRDAKMIQAARGDAASFVASNGDIRGVQLEEAFRSLRDQLPAAREANDLQLAQAILAL
>NZ_CP018758.1|WP_058763098.1|3285489_3285789_+|DUF2388-domain-containing-protein
MFFRRFAGLLLGLSLAAPAFAFDSTTESLVKTIYGTSQLTTAPFQNKLVLAARDDAATFVATDGVVRGAQLEETLRALRAADPGLHASDRELAQAILSQ
>NZ_CP018758.1|WP_058763096.1|3285066_3285387_+|DUF2388-domain-containing-protein
MKTLHLGAAAALFCLSSAASASSFYVTTDIIVNAIDATSDATSAITGSFKNDKLVLAARDDAASFVGSAGDIRGVRLEAALDHLRTQAPQLRQASDAQLAQAILAI
>NZ_CP018758.1|WP_058763094.1|3284783_3284993_+|DUF1127-domain-containing-protein
MDRLSSSPSLVRLSTRRLGLGRLLGLLARWRHRMVSRRQLQQLDSRALADLGLNQADQSREGDKPFWRE
>NZ_CP018758.1|WP_074529041.1|3283570_3284524_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MSFKVFVDGQEGTTGLRLLDYLTGRPDIELLRIDESKRKDPAERARFLNTADVAFLCLPDAASREAVSLVTNPHTCIIDASTAFRTDSSWTYGLPELAPGQREALRASKRIANPGCHATAFILLARPLVDAGLLAPETPLSAFSLTGYSGGGKQMIAAYEAGGDARLQSPRPYAMAQGHKHLPEMRVQSGLAAAPVFSPIVGPFLKGLAVTIPLHASQLRPGTTAADLQAALARHYEGEAFIRVAPVAAEEELDNGFFDVQASNDTNRADLFVFGNAERLTLVARLDNLGKGAAGAAVQCMNVHLGVDEGLGLNNGR
>NZ_CP018758.1|WP_074529043.1|3292561_3295258_-|magnesium-translocating-P-type-ATPase
MLSKLFTQPLLAFFSQRLDRRLFRRPALWQHLPASQGQREPNADFSRRLHEAAGSAEGELLRRYRSSPLGLSAAEAAERRRLQGHNEVEQGQTLSAWRHLWLSYRNPFNLLLTLLALVSALTADLPGAIVIGTMVLVSTVLRFVQESRSNRAAERLKALVSTTATVLRPEASNPFGVEVPIRDLVPGDVVRLAAGDMIPADLRLLSTRDLFVSQAALTGESLPVEKRALTLTDSGSALDWDNLCFMGTNVVSGAATAVVIGTGLDTYFGSLAQHVTRGGEEPNAFQQGVNKVSWLLIRFMLVMAPLVLLINGLTKGNWLDATLFALSVAVGLTPEMLPMIVTATLARGAVVLARQKVVVKRLDAIQNFGAMQVLCTDKTGTLTQDRILLERHTDARGQPSDAVLEYAYLNSHYQTGLKNLLDVAVLKRGELRGLTLTYRKVDELPFDFERRRMSVVVADGRRHLLVCKGALEEMLAACSLVREDGADLPLTAERLAHIRALTAGFNDEGLRVVAVGIRELPGDNLDYSVADERDLVLIGYIAFLDPPKETAVGALRALAEQGVTVKVLTGDNERVTRRICQDVGLDVEGLLTGTEIESLDDPALSALLDSTTVFARLTPAHKERLVRLLRDQGLVVGFLGDGINDAPALRTADIGISVDSAVDIAKEAADIILLEKSLLVLEEGVRQGRKTFANMLKYIKITASSNFGNVFSVLVASAFLPFLPMLPLQLLVQNLLYDLAQTAVPFDHVDADLLARPQQWNVEGLGRFMLFFGPLSSLFDLLTFLLLWQVFDANTVAHQTLFQTGWFVEGLLSQTLVVHLIRTRRLPFVQSCAATPLLVMTGLIVAIGLLLPFSPLAGYFRLQPLPLGYFAYLAALLVGYALVVQSMKGWFIRRYGWQ
>NZ_CP018758.1|WP_081375642.1|3295469_3295985_-|hypothetical-protein
MGLLRLDDLLDERPDLVEIGGFERTDKHGLPRRTGGTPVSPSRPSLPNPRPLPGAPDRSGGRPPRAPRRDPRHPAPGGGVAPLALADRTPAAAEVSATLAVLDRQLGDDAFLCTPNFGLADALLAPMLDYLERLPEPRWLATWPRLDAYLARLRQRPSGQAILVAPDFTLR
>NZ_CP018758.1|WP_058785386.1|3295901_3296396_+|GNAT-family-N-acetyltransferase
MLIRPLEAADFDQVWPLIQQVVQAQETYAYAPDMTREEAWRLWVEVPRATYVAEREGQILGSYYLKANAMGPGDHVCNCGYMVAPAARGQGVAGALCEHSLQVARELGFLAMQFNSVVASNSVAVRLWQKHGFQIVGTLPKAYRHGSLGLVDCLVMYRWLGEEL
>NZ_CP018758.1|WP_074529044.1|3296682_3298392_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRLSVFRSGLGFGLLFCLASAQAQVVPTNPGDTDLIRNRQERLLQEQQKRLQDLQELPGPAAQPAPPPPTAEGRCFTIQHIELQGAEHLSAQDQATLTQPYIGQCLGVNQLNALLKTITDTYIGRGYVTSRAYLPQQDLAKGTLTILVVEGKLESLKPAAGSGLTPRELNMAFPGAPGQLLNLRELEQMVDQLNRLPSNQVQMDLVPGKAVGGSDVEVKNTPSKPWRASLSRNNNGQRSTGEQQWGLGLEWDDPLGLADQLVLRGGHDAVSDHTQLSRNGYLGYSLPWGWWTFNYSYSRNDYRSQAEANGFSFQQSGDSQNQQFKAERVVHRDAVSKTALNSGLSLLSTNNYIEDSRLGLSSNRISELQLGFNHGRRFGSAFVNLDLGWQRGIGIFGAQGDPSSAPGQPTARYSKYTGTLSYLQNFLLLGENLSFSSLATGQYTDDVLYSPQRMSLGGLASIRGFKDQSLSGDTGGYWRNDLRWTRAVTWGWLQPLFSQYGIGLGYDQGVIHHGRYNPEMHGRLSSDSLELFARGRYLSASLTFAQSLERPAALPEREHPLYFSVDLFL
>NZ_CP018758.1|WP_074529045.1|3298432_3311722_+|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MDVRQFDFLAAQPSAELKPRETFCGISKRALALLLVNALFWQPIWAQAEGLVVSNGNGARLDQAGNGVPIVNIATPGANGLSHNQFQDYNVDSRGVILNNVTDRTGNTQLGGIIVGNPNLKGTAAGVILNEVVGGSPSQLKGYTEVAGQAARVIVANPYGVTCNGCGFINTPRVTLTTGKPILDGNRLDRFQVDGGSITVEGNGLNADNVDQFDIVTRSAKINAELHARQLTIIAGRNDVAADSLAATPRAASPGDAPQLAIDSSALGGMYANTIRLVGTEAGVGVKLAGNLAASAGDIQLDANGQLTLAQAAASGNIALKSQGIDAQGPVYAGGGINVQSGGDLNVRQSVAARNAIALSATGQITNAGVIEAGINPDNSRNATGDVSLQGAGITNRGSVIASRNLSATASDTLDNTGATLSAGSQAQLQASTLGNAQGRIQSQGSLAVQAASLDNTQGLVTSVGALTATLGQTSNGNGEISSQARLTLQGQGLDNRQGKLIGTSGLDLTLNTLDNRSGTLVSHGDLQARVTGTLDNRQQGTLQSAGNTTLSFGQLLNAQGVLTSAAALSLSGSQVNNNGGQIGSQGNLTATLGRLDQLNGQFISQGQLSLIADRLGNTGNSLVGGQNGVELRVTAVDNRGGEVSSQSGSVSLTGQSLLNNGSKVIAGNDLNMAVTTVDNSASGLLSAKQYLRLNGQSLNNSAGGVLNAGAGLQAILSGALDNALGKLLAQGGLTLGSASLDNRQGLVSSVGQQTLTVTGGAVQNDGGQLVTDSGLTLSSASLDNGTGTLSAKGAVSLTTGTLTNAQNGRLVGSDTFSVTAGNLSNAGRLVSAKDLQVSTASLTNSGELFSQAGLSLDLQHGSLANISGGLITAPGALVLKNLGDVRNAGELSSGQSFTLAATSLDNSGGKLISNASLTLRIARALTNAKGTLSAAGLDIAAASLDNGAGVLTSHQDLRVKLAGDLLNGQGQLLSDGALGVTAANLDNRQGLVSSAGQQTLMLAGGALQNGNGQLVTDSGLTLSSGSLDNGAGTLSAKGAVTLTTGELNNAQQGSLVSGGPLAITAQQLDNTSGLVSSGQALQLNLGGALDNTQGRLLGQSSLDLKATRLDNRQGQVSSVGQQTLTITGAVQNDGGQLVTDSGLTLDSASLDNGTGALSAKGAVSLSTTGAITNTQNGRLIGSDTFSVTAGSLTNVGRLASAKDLQVSTASLTNSGELFSQAGLTLDLQHGSLTNASGGLITAPGALVLKNLGDVRSAGELSSGQAFTLAATSLDNSGGKLISNASLTLRIARALTNAKGALSAAGLDIEAASLDNSAGVLTSHQDLNVTLAGDLLNGQGQLLSEGALGIAAANLDNRQGLVSSAGQQTLTVTNGKVQNDGGQLVTDSGLSLSSASLDNGAGTLSAKGAVSLTTTGAISNAQTGRLIGSDTFSLNAGSLTNAGRLASGKDLQVTTASLVNSSELFSQAGLTLDLKNGSLTNASGGLITAPGALVLKNLNTVSNAGELSSGQAFTLAATRLDNSGGKLISNASLTLRIAQALTNAKGALSATGLDIAAASLDNSAGLVTSHQNLIVKLTGARVDGQGQLLNGQGQLLSDGTLDLTAANLDNRQGLVSSAGQQTLTVNGGAVQNGGGQLVADGGLSLSSASLDNVAGTLSAKGAMSLTTGVLANGQKGRLVGGDHLTVRALRLDNTAGLISAAKGMQLTLSDGVSNGQGQLLSEGTLGVTAANLDNRQGVISSAGQQTFTVTDGAVQNDGGQLVTDGGLSLSSASLDNGTGTLSAKGAVSLTTTGALSNAQTGRLIGSDVFTVNANSLTNAGRLASAKDLQITTASLTNSGELFSQASLTLDLKNGSLTNASGGLITAPGALLLKNLNTVSNAGELSSGQTFTLAATSLDNSGGKLVSNASLTLRIARALSNAKGTLSAAGLDLQAASLANAGGTLVSRGALSATTTGLLDNSADGLFSAATTLDVTANSLTNSGGSLLAKGPATITAGQLDNTAKGLINSQANLTLTADRLDSSNDGEVSAKGDLQLTLGELKQQGGHLIGESALALDLSRSGGTGNLDNTGGLITTSGVLSFAHLNQVTNTSGEISSAQSFDLIAQALDNSKGKLISQGLLKVQAGQMINEGGLLSGWQGLTVSGGNLSNRQSGTLSSKTGDLAVSLSGTLDNGDNGALATQGALTVTAANLNNTGGVLSSSGAQTLTVTGTLQNGTQGLIDAKGTLTVNAGQYANSGTTQAQQALSVSAGTLDNRGGTLNGQQTVTLDLLGALTNTNGAVLAQGDLLVKRATQVSNGKGRLNSGGLLTLLVGSLDNSTGGTLAGQSGLNITASGQISNGGDGLLASQGGALSVTAGSLDNSGGTLQSATGLTLATGSGTVGNAGGKLLAQNGDLSITAGSLDNRGGILASLQGAFTAGISGLLANGGQGQTGGTVQAQRLDLSAGTLNNYNGKLSALGGDALIQAGSFDNRNASLYGKGLVRVRGGSFDNSGDNDGQVFGNQIDFSLSGALNNRLGIIESNSTLSLAAASLDNTNGRLRALGSSGTTQLTLGGTLDNTNGRLESANPNLQLNLGGLINANGTLLHVGTGTFGLGLPLLQSAGGSVTSNGTLTLSGSSWTNSSTLQVANLVVNVDNLTQTGSGQLLASNSFSGNGSNWTNDGLISAGGNLKVTLGGTYSGAGRINSGYDFTLNAGQLLLDNPNARVAGGAGTTTLGIGGLLRNQARITSAGSFALNAGQVDNQGTLGASGNLAINTPTLTNQNSSLIFSGGDMAFGVGNFTNSHADVYSLGDLTIGGYNAARASSLLNVSGTLESGGSTRFYTDSLENRTEGFALGRKLISGAIAVKCVDGTCSDDHVYPDYWVKETYQSVDNDTSAAASITAGRDFVFQGGTLLNSKSTLSASGNISITANSVTNQGAQSGTIERIRVYRFPRIQGYKLGRIVGEVVVPYNQQDNPIFPNVYYIDANGNWRVGVPESYMHRDGGRDSTYTPSVRLRDAQTNAIVYDTETGYAYNQIPASHYDQNNLVAIPAAIQQGSLIKDTETVTNGSGTTRSAVIQAGGSVYINASQNLENSVIRQDYGVATGTNRVQGTQVSPAGAPTVISLNSQLPPNLAQQQVNPTTLPGFSLPSGQNGLFRLSSQQGSEAEIKPANQAVAVLKTQVAFVDKASTQVATFNSGRTDENVERLLSTQTASVSPLGTQRVANAALSSQTQLETLASIRDVIPALARKQAVETELPNQVAVEHLPEMTKPAALTMRLPVALVGQMRDASLADGTIKEVAAKGIVQSETPVSIPNTVGNSLPHRYLVETNPALTDLKQFLSSDYLLGNLKYDPDTSWKRLGDGLYEQRLVQQAIVARTGQRFIDGLTSDEAQFKYLMDNALASKQALGLSVGVSLTAAQVAALTHDIVWMEDQVINGEHVLVPVLYLANANNRLAPNGALIQGSDVTLIAGNDLSNSGTLKATGSLSATAGNDLVNSGLIQSGDRLSLTSTSGDISNRAGGIISGRDVSLTASRGDILNERTITTQASRYGDLSTRQDYADSAARIEASNNLSLTAGRDINNVGSVLSAGGNATLIAGRDVNLVSAQTQSGRSNGANDTRSSITQLTGSLTAGRDLGIGAGRDLTATATTLTAGGNATLTAQDNLTLSAAADETHSYSYSKHGGKKLTTQEDHVDQQATTLTAGGNVNLVAKQGDLTLVASKVEAANEAYLYAGKDLNVLAAQDSDYSLYSKKSKGSFGSKSTKRDEVTDVRNIGSEIKAGGSVTLQSEGNQTYQAAKLSSGKDLTLNSGGDITFEAVKDLHQESHEKSSNSLAWTSMQGKGNTDETLKQSQLVAQGQLAIQAANKIHIDVKDINGQTVSQTVDAMVKADPNLAWIKQAEQRGDIDWRQVKEIHDSFKYSHSGLGAGAQLVLAIALAALTGGAGAALVGAAEGTATAAVANAVALGMETTAANSFISNRGDLGATFKDTFSSSSLKNYAVSGLTAGFTTGYLDKAFGVTGDNAFKVTRGFDLNTLDGVGRFAAYSAAQGTFQAAAQTAIQGGSFGQNLSGALTSQAQGLAQAVAFNAVGTYTEGKYADGSVEKIAMHALVGGLLSAAEGKGFATGAAAAGANEALINQLSSMVSSSPNSQQLLLAASQIVGVLAAASVNGDVQTGANIARDATAYNREAHDEERRALDKEEATGNLDQVKLEKAACYLIKCWDQYPRGSQEYKDNMVTDADVAGLNKELDWVVSKQGQGLFKYSFTDGLSDAFTRDVVPTGGYLATAALGGLGVAAGAGLCSSAFGCAVGGPMGVFGAGNAIEGATGLYNHFFSESAGSYNPVKSAFNAIPGGYGGVIYSGADLLLAGASGFVKVPLKMGLADGLNRSTSMFGVRVMGMDNNYVAPSLISNLFPRLTRPLPYGTAGLIYMKGIYSKGSDFYEQIKSR
>NZ_CP018758.1|WP_157772830.1|3312088_3313141_+|hypothetical-protein
MKCSAGYPEGSAEYNTYKAIEDLGYSPAYAYAYAYAYAYAYAYAYAYAYADARQAVQTSGLFDYGGLDSVRDAIGRYQVAERLGGAAQIVNGAFTAGVGAAVTFGTGGAGYVIGAPLFLAGSDNAAAGASTLAFGNQTYTFGAQGLSNALGFSPGSAEMLYGLGSAAGEAAAVNQILGGVGKATFGSTASSFDNVASRADGDFGYLNQSPKEAGNPRIDYSRGFENDLKNFDSGYTLISGPLEKDLILVSYHVDTPFGVDRSAKWWTTTEQANNIATIDDIHQKLALLPEWGLRESVSVAKIPKGTDIEAYFGTAKAQIDKAGNVFEGGGAQYRFKDFDPSWVYEVRKMP
>NZ_CP018758.1|WP_074529047.1|3313137_3313440_+|hypothetical-protein
MKKKEIEVFLEKLNQAIDLVVLKKNMIEGASKNLDILVSVLQGYKESAESGILFSPLKEKIVSRGVVLGLSKAVGDWSDDEELISCMEELDDSYEKIMSV
>NZ_CP018758.1|WP_157772831.1|3315778_3316486_+|hypothetical-protein
MVKADPNLAWIKQAEQRGDIDWRQVKEVHDSFKYSHSGLSGPAAMAIAIVVAYFTAGAASAAIGNLAGAAAGSGSAMAAAGTATASAVASDATVGSTVAAGWANAAAAAALTSMASSGAVSLINNRGNIGATLKETLSSDGLKNAMIAAGTAGFMSYASSNWFKTTVDPVSGKVTEESVIEYDQYGRQVKRTDYTNHGYGDQGKPTEYHSDPHTYTYEYGPGYGVNGKETRINND
>NZ_CP018758.1|WP_081375605.1|3316427_3316802_+|hypothetical-protein
MNMVQAMASMGKRRGSIMISLPELNELLVAHNCLHEISIQLNEDGVAYDLSLSISASEKVGADVVRIRFIDISQFTSRDFGGGLTQLMHMDVNKLDSDLDRMRYQLSDLEDGKLSFYFSSFSVA
>NZ_CP018758.1|WP_074529051.1|3316991_3317306_+|hypothetical-protein
MGKLLWEAGDRFIFHRLNLTTQEDHVDQQATTLTAGGNVTLVASKVAAGGEAYLYAGKDLNVLAAQDSDYSLYDKQSKSSFGSKKTKRDCLQAIEWSQGIVTSE

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Crispr_ID: NZ_CP018758_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_8

3488081-3488154

Orphan

Consensus_repeat	Method
AGACATGGCTACCGCACAGGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018758_8

>merge|NZ_CP018758|8|3488081-3488154|CRISPRCasFinder
AGACATGGCTACCGCACAGGTTTACCGTGTTGGAGGGGCAAGCCATTCGCAAGACATGGCTACCGCACGGGTTT

>NZ_CP018758|8|8|3488081-3488154|CRISPRCasFinder
AGACATGGCTACCGCACAGGTTT	ACCGTGTTGGAGGGGCAAGCCATTCGCA
AGACATGGCTACCGCACGGGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_058760358.1\|3474850_3476050_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340833
NZ_CP018758.1\|WP_074529114.1\|3479757_3480288_-\|transcription/translation-regulatory-transformer-protein-RfaH	unknown	unknown	gnl\|CDD\|131010
NZ_CP018758.1\|WP_058760343.1\|3493307_3493637_+\|iron-donor-protein-CyaY	unknown	unknown	gnl\|CDD\|234765
NZ_CP018758.1\|WP_058794073.1\|3488612_3489323_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|182696
NZ_CP018758.1\|WP_074529112.1\|3476369_3477458_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340838
NZ_CP018758.1\|WP_058760352.1\|3482601_3483537_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133039
NZ_CP018758.1\|WP_007161378.1\|3493011_3493137_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|338858
NZ_CP018758.1\|WP_058766021.1\|3480331_3482545_-\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|183173
NZ_CP018758.1\|WP_058766015.1\|3490911_3491742_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP018758.1\|WP_058760344.1\|3491754_3493002_-\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP018758.1\|WP_058760355.1\|3478731_3479730_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133017
NZ_CP018758.1\|WP_058777405.1\|3483538_3485074_-\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP018758.1\|WP_074529113.1\|3477487_3478735_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340850
NZ_CP018758.1\|WP_058760342.1\|3493829_3494213_+\|nucleoside-diphosphate-kinase-regulator	unknown	unknown	gnl\|CDD\|180236
NZ_CP018758.1\|WP_074529117.1\|3489319_3490213_-\|tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|234698
NZ_CP018758.1\|WP_058760341.1\|3494209_3494497_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_058766016.1\|3490228_3490915_-\|DUF484-family-protein	unknown	unknown	gnl\|CDD\|282228
NZ_CP018758.1\|WP_058760340.1\|3494551_3495538_+\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213371
NZ_CP018758.1\|WP_074529115.1\|3485093_3486266_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740
NZ_CP018758.1\|WP_074529116.1\|3486310_3487690_-\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_058760358.1\|3474850_3476050_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340833	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbaZ in Salmonella enterica has been shown to possess mannosyltransferase activity.	0
NZ_CP018758.1\|WP_074529114.1\|3479757_3480288_-\|transcription/translation-regulatory-transformer-protein-RfaH	gnl\|CDD\|131010	TIGR01955, Transcriptional_activator_rfaH., transcription elongation factor/antiterminator RfaH. This model represents the transcription elongation factor/antiterminator, RfaH. This protein is most closely related to the transcriptional termination/antitermination protein NusG (TIGR00922) and contains the KOW motif (pfam00467). This protein appears to be limited to the gamma proteobacteria. In E. coli, this gene appears to control the expression of haemolysin, sex factor and lipopolysaccharide genes. [Transcription, Transcription factors].	5.03054e-51
NZ_CP018758.1\|WP_058760343.1\|3493307_3493637_+\|iron-donor-protein-CyaY	gnl\|CDD\|234765	PRK00446, cyaY, frataxin-like protein; Provisional.	1.20181e-49
NZ_CP018758.1\|WP_058794073.1\|3488612_3489323_-\|HAD-IA-family-hydrolase	gnl\|CDD\|182696	PRK10748, PRK10748, 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB.	1.00415e-42
NZ_CP018758.1\|WP_074529112.1\|3476369_3477458_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	2.55569e-100
NZ_CP018758.1\|WP_058760352.1\|3482601_3483537_-\|glycosyltransferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.87739e-22
NZ_CP018758.1\|WP_007161378.1\|3493011_3493137_-\|hypothetical-protein	gnl\|CDD\|338858	pfam13627, LPAM_2, Prokaryotic lipoprotein-attachment site. In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognizes a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached.	2.07466e-07
NZ_CP018758.1\|WP_058766021.1\|3480331_3482545_-\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|183173	PRK11519, PRK11519, tyrosine-protein kinase Wzc.	0
NZ_CP018758.1\|WP_058766015.1\|3490911_3491742_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	3.27411e-148
NZ_CP018758.1\|WP_058760344.1\|3491754_3493002_-\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	0
NZ_CP018758.1\|WP_058760355.1\|3478731_3479730_-\|glycosyltransferase	gnl\|CDD\|133017	cd02526, GT2_RfbF_like, RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.	1.19317e-17
NZ_CP018758.1\|WP_058777405.1\|3483538_3485074_-\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	7.88877e-29
NZ_CP018758.1\|WP_074529113.1\|3477487_3478735_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340850	cd03823, GT4_ExpE7-like, glycosyltransferase ExpE7 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).	3.44818e-96
NZ_CP018758.1\|WP_058760342.1\|3493829_3494213_+\|nucleoside-diphosphate-kinase-regulator	gnl\|CDD\|180236	PRK05753, PRK05753, nucleoside diphosphate kinase regulator; Provisional.	5.29303e-41
NZ_CP018758.1\|WP_074529115.1\|3485093_3486266_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	3.07587e-109
NZ_CP018758.1\|WP_058766016.1\|3490228_3490915_-\|DUF484-family-protein	gnl\|CDD\|282228	pfam04340, DUF484, Protein of unknown function, DUF484. This family consists of several proteins of uncharacterized function.	3.24629e-67
NZ_CP018758.1\|WP_058760340.1\|3494551_3495538_+\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213371	cd12837, EcCorA-like_u1, uncharacterized subgroup of the Escherichia coli Mg2+ transporter CorA_like subfamily. A uncharacterized subgroup of the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. The EcCorA_ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA_ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	2.6018e-159
NZ_CP018758.1\|WP_074529117.1\|3489319_3490213_-\|tyrosine-recombinase-XerC	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	5.66806e-156

>NZ_CP018758.1|WP_074529116.1|3486310_3487690_-|pyridine-nucleotide-disulfide-oxidoreductase
MARNDLSESTLGCLIGGAGPAGLGFLFNAIKRGAVAQLAQAGTIIVDAGTELGAGKLGDYQIIANSVSDVFLDCLRDPLLAPILAPLHASPTYRHLKLNAQEAPALPIVGQLFQQAAALVLPWLERQYGIPTWRQTRITEVTCEGSSYVVWLEQAGAIRRVRTSSLVLNLGGKQTRQSFAEGTQAMGLQLPQSAPIDSSDNLLRLQPEALRQRYRAHLKDGGPICVVGGSHSAFSALDNLASALHHDGLRELTLVHRSPIRLFYETAAEALAAGYEFDPMQDICPISKRVNRSGGLRYRAQEIGRQVLAGQCIGGTPVRVNTLQLDGSPERLERAQRLFDNAALLVQGLGYQPILPELRGEDGRPLTLRTLRGGLDSDAAGCPLDQHGQRLKGLHLFGLGSGLAVDPRLGSEASFSGRIYGVWQFHNDASREALESVLDRLDKPGATFRQAGDAVVEHA
>NZ_CP018758.1|WP_074529115.1|3485093_3486266_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MINVTKPYLGDKERFKAYIDKIYANNWITNQGPLHAQLEERLRDYLGVRNIILVNNGTLALQVAYRALGLTGSAITTPFSFVATTSTLHWERIRPIFADIHPETWNLDPANVEAVIEPDTSAIVATHVFGNPCDVQGLQQVAQRHGLKVVYDGAHAFGTRYEGRSVLQWGDITTVSFHATKLFHTIEGGAIITEDDELAERVRRMINFGIVDAERIEGLGINAKLNEVSAAMGLCILDELEDILARRASIGRYYEARLQGTFDLQRPTYSSQLNYSYFPVALRDEPALLDTKQALNAVGINPRRYFYPSLETLDYLQPQAIKPISRKLSQRILCVPIYPDLPETTQDLLLETLLSVQQKKTSLESLRALITPAQLLPSWDFPGDSAPALT
>NZ_CP018758.1|WP_058777405.1|3483538_3485074_-|oligosaccharide-flippase-family-protein
MTRPAKVSVLRNTLINYAGQAYALLIGILIQPLYLGHLGAETYGLIGFFAVLQTWLQLLDVGISASLVRDVAHGRGQTGAGRTRGQLLRSLEFVFIPLATLAFVAIELNSAWMAGHWLNVQGLPEATVAHCIGLMGLMIAFRLLSTLYKSGVQGVELHGWLNLVNVLIATVRYFGGLILVMWISQEPLDFFVFQAFVAVFEMLVYALKAYRLLPNPSWWSGFDWQRVKPIVPFAASMSFTSILWIALTQLDKLVLSKALPLAEYGYFSLVALISTGIVTLTNPLVQALLPRMTVLVSQGQALELERLYRNAARFAFAILLPLAAMVAFHGEALVYAWTGDRVSAHWSEPILFWYALGAALLALSQFQFYLQYAYGKLRLHVWYSLVSAVISVPIVILVVLHYGAYGAALAWFCMRLIPFVIWPAIIHGRFAPNLQRYWNQDLLVAVVVTALGVGLSKLLYQQIQPQERFAILATLALSGGLTLLLVALGYVLCSPKQTRTRLFSHLYKAGI
>NZ_CP018758.1|WP_058760352.1|3482601_3483537_-|glycosyltransferase
MDARTETDIMKRWPTDATRPVLSIVCLTFNHRDYIAQAIDGFLRQQTDFPFEIIINDDVSTDGTRDILRDYAQRYPRLIRLILQEENQYSQGKPYGMPVFQQARGDYIAYCEGDDYWNDPRKLQLQVDFLERNRDYALTFHASYAFNSQGIVNPQRFDGRDHFDRSETDLKKALPLSTLTACFRNVLRELPPELQTAALMDIVWWSLLGAHGKGKFMAEIRPAAYRVHEGGIFSMRASQKRLQMDLHTQYCLANYYYRLGERDLHIFFLRQVLSLSLSSIPPAQKLKALARAVCNIAVNTGRRFAPKRVTY
>NZ_CP018758.1|WP_058766021.1|3480331_3482545_-|polysaccharide-biosynthesis-tyrosine-autokinase
MTAMQRSSFDQHEEQHLDLKTMALTLLDHKKLIAGITGGFLALGIAYAVLSTPQYVAGAMIQIEPKKNALTAVAETVVRPNSASPAVAEIELLKSRAVLAKTVENLRLDIEAKPRFFPLIGHYLWRTYDADHPGQLADSWPQLRRFAWGGEKIDVFQLDVPDEMYGEPLTVVAGSNGRYRLLDKDKQAVLEGQVGQLATGNGYRVQIKTLTARAGTEFKVTRNRVITTAQLYQNRIKTSEAGKESGIIYLSLADENPDLAKSVLAEISRLYVLQNVERSSAEAAQRLDFLRSQLPGVRKDLESAEAALNNYQTNSRSVDISLETKAVLDKIVALDTSISQLKLKQAEYDRLYTRDHPTYKTLLNQLEQLEVEKRSLQRKVEALPSTQQELLRLNRDMKVTNQTYQLLLNQAQEQDIIRAGTIGNVRLVDNADVNLDEPATNRKIALILSLLLGLVTSVIVVFVRQAFQKGIENPDTVEQIGLPVYSTLPFTKDQERLNRRLKKKTRNGEPLLLSVVQPANLAVESLRSLRSSLHFAMLEAKNRVIMISSPTPGVGKSFVSSNLATVVAQSGQRVLLIDADMRKGYLHRVFGLQPQAGLSEVLTGRSKLRDAILPSGVAQLDIIGCGQAAPNPSELLMHANFSRLLDEVGSLYDLVIVDTPPILAVTDAALVGRLAGTTLLVTRFGQSTLKAVENSRRRFAQNGITIKGAILNGVQRKASMAIEDDGAYGYYEYGPRT
>NZ_CP018758.1|WP_074529114.1|3479757_3480288_-|transcription/translation-regulatory-transformer-protein-RfaH
MTLALRSSHWYLVQTKPNQEVRAEENLSRQGFVCFRPQRERQAAGRSRVATQESLFPGYLFIHLNDVNDNWYPIRSTRGVNRIVSFGAQPTAVGEDIIDAIRQRLATPVEAPPAHQPGAAVRVQYSPELEMDAVFLSPDGNERAIILLRILQREQRVSVALDQLSAATPAHQRLRA
>NZ_CP018758.1|WP_058760355.1|3478731_3479730_-|glycosyltransferase
MHCKTTVVTVTYGNRLCYLEQLVSRALAERCVHQVIVVSNAATVALDSLEARWPGQVKVIALSENTGSANGYAVALEAALASETTHIWMMDDDNAPLGDALDVLHRQLDALATRYGQDKVAVLGYRPTQQADIAQCIPTRMITQPRSSYFGFHVARIPYKIWRRLPWGRPRGGTPAALVELPFAPYGGMLAHRSLYERIGLPLRELVLYSDDTEYTYRITQAGGKLFMVTGAELEELEHSWNIKENTSNVYQNYLRAGSDFRAYYAARNQAWFDKNVWAHSRPMYRLNRYVFHTLLKLFARDEQSRQRLALIRQAVQDGETGALGINRSYPL
>NZ_CP018758.1|WP_074529113.1|3477487_3478735_-|glycosyltransferase-family-4-protein
MKLLFLNSFYPPHVGGGAELILQRSVEGFQQRGDEVCVLVTGPAAGLVQEQVNGVRVYRAGLKNLYWPLTQQRPGPLARFGWHFRDQYNTSMRTPLREVLQRERPDLVVCHNLSGWSVSAWDEIRASGTPLVQVLHDMYLLCPKNTLFKKGQSCQKRCGSCAALRRPHAAHSAQVDAVVGVSRYLLETIRDKGYFQGVPAQVIHNSSLIDGNHEALPPSPAGNPLRFGYLGTLSENKGVGWLIEQFQRLSLNATLTIAGKGQLAYEEQLKAMADPSRVSFVGYQRPQDFFNSIDVFVVPSLWAEPFGMVAVEACAFQKPVIASRMGGLPEIVRDGVNGLLCNPADRDSLGRALQRLHDDAELRQRLSLLSRSAVAPLLSLEPMLDDYHRLFEQVLGQARHGAAGTLHPAQTQLSN
>NZ_CP018758.1|WP_074529112.1|3476369_3477458_-|glycosyltransferase-family-4-protein
MIIVNSRFITQDLRGVQRFAECLSLELAKLRGDLRFVAPSGSVRPEVAKRLNIEVIGTHQGQRWEQWDLPNWLRTQGNPLLLSLCSTAPLLYANQIATHHDINYVRFPESYSWKFRTAYRCLIPLLLRRTRSLITVSEFSKAEISRFYRYPGDSISVVPNAVAEAFTLDGPVAAAGKPYLLAVSSPSYHKNFARMLAAFAALPEGLDVELRIVGDSHAVFGQTDLATLAARDRRVKLLGRIDDQALAQQYRHATAFVFPSLYEGFGIPPLEAQACGCPVISANTASMPEVLQDSALYFDPYEASSITQAMLTILRDPGLRATLIAKGLANTQRFSWKTSAGKVSELLDTALAAAPKTAAKAA
>NZ_CP018758.1|WP_058760358.1|3474850_3476050_-|glycosyltransferase-family-4-protein
MKIAIVHDWLVTFAGAERVLAELFEIWPEADLFSVIDFLSEEDRAHLKGKHATTTFIQRLPQAKKRYQTYLPLMPHAIEQLDLSGYDLIISSSHAVAKGVLTGPDQLHISYVHSPIRYAWDLQHQYLKEAGLNTGLKGKLARIILHYVRIWDQRTAAGVDAFVANSHFIARRISKAYRREAKVIYPPVDISRFTPAGDKDDFYLTASRMVPYKRMPMIVEAFSAMPDKKLVVIGAGPEFEKAKEVAGPNVTLLGYQDFDCLLDHMRRARAFVFAAEEDFGITPIEAQACGTPVIAFGRGGVLETVRGLDVQHPTGVFYPEQSVASLCAAVRQFEALETPISQQACRHNAERFAIKRFRQEMRTFVEARVAALHLPTDLDLDIVTPFPSKGLQPSSLNTA
>NZ_CP018758.1|WP_058794073.1|3488612_3489323_-|HAD-IA-family-hydrolase
MTIRLVTFDLDDTLWEIAPVIHSAEALLRDWFAESAPRLGSVPVEHLWAIRDRLLQQDAGLKHRVSELRRRVIHQALLDAGYVEPEAAQLAEAGFAVYLAARQQVTLFEDVHPTLERLADRYTLGVLTNGNADVQTIGLADYFRFALNAEQLGIGKPDPTPFREALRLTGIAASETVHVGDNPVDDVQGAQRAGIRAVWFNPLQNAWQGAGQPDAEIRSLSELPALLATWSTYENK
>NZ_CP018758.1|WP_074529117.1|3489319_3490213_-|tyrosine-recombinase-XerC
MQVQLDAYLDHLRLERQVSPHTLDGYRRDLRKLLAFAEAEGMADWGALDGRRLRALIAQLHRAGASSRSLARLLSACRGFYLYLIREGFCSQDPAHGLSPPKAQKPLPKVLDVDRSMQLLDGAVEDDFLGLRDQALLELFYSSGLRLSELVGLDLADVDLAQGLVQVRGKGNKERVLPIGSKAREALATWLKVRPQAAPRDDALFIGQRGLRLTPRAVQLRVREAGVRELGQHLHPHMLRHSFASHMLSASGDLRAVQELLGHADIATTQIYTHLDFGQLAEVYDKAHPRAKRKASQ
>NZ_CP018758.1|WP_058766016.1|3490228_3490915_-|DUF484-family-protein
MSDTPELTPDQVADWLLDHPHFFADREELLAEMRVPHQRGTAISLVERQLGLLRDRNGEMRQRLAHLMDVARDNDRLFDKTRRLIIGLLDANSLEEVIGTVEDSLRHEFKVPYVGLILFHEHPLPVGRSVTHAEAQKVIGGLLGGEKTTSGVLRAHELAFLFGDSAKEEVGSAAVAALSHQGLHGVLAIGSPDPQHYRSSLGTLFLSHVAEVLARVLPRFPVPLRTVR
>NZ_CP018758.1|WP_058766015.1|3490911_3491742_-|diaminopimelate-epimerase
MQLRFTKMHGLGNDFMVLDLISQHAHIQPKHVRQWGDRNTGIGFDQLLIVETPTKPDVDFRYRIFNADGSEVEQCGNGARCFARFVFDKRLTVKKQIRVETKSGIIELLLKGDGLVRVDMGAPRLQAAEIPFVAEAEALSHAVQVDGETVELSVVSMGNPHGVLRVADVDQAPVLTLGPKLECHPRFPQKANIGFLQVIDAQRARLRVWERGVGETRACGTGACAAAVAGIRQGWLTSPVSIELPGGLLNIEWDGVGQPVLMTGPATRVYEGQVRV
>NZ_CP018758.1|WP_058760344.1|3491754_3493002_-|diaminopimelate-decarboxylase
MEVFAVRAGELHAEGVSLSAVAQQFGTPTYVYSRAHIEGQYRAYTDALAGLPHLVCFAVKANSNLGVLNALARLGAGFDIVSRGELERVLAAGGDPHKVVFSGVGKTRDDMRRALEVGVHCFNVESTDELERLQQVAAELGVVAPISLRVNPDVDAGTHPYISTGLKENKFGIDIADAEAVYARAAELPNLEILGVDCHIGSQLTSLPPFLDALDRLLALIDRLAERGIVLRHLDLGGGLGVRYRDEQPPLAGDYIQAIRERIEGRQLTLVFEPGRFIVANGGVLLTRVEYLKHTAHKDFAIVDAAMNDLIRPALYQAWMAVEPVAARQGEARRYDLVGPICETGDFLAKDRELVLAEGDLLVIRSAGAYGFTMSSNYNTRGRAAEVMVDGDQAHLVRRRETLEELFAGESRLPS
>NZ_CP018758.1|WP_007161378.1|3493011_3493137_-|hypothetical-protein
MKRLSLLFIACACLLAGCGQKGPLYLPDDQKAAKEHRHDVF
>NZ_CP018758.1|WP_058760343.1|3493307_3493637_+|iron-donor-protein-CyaY
MSRLSEAQFHHLVDQTQRQVEDAYDDSGLDLDLENAGGVLTVKFDNGSQVILSRQPPLVQLWVAARSGGYHFDWDGQNWICDSSPETLGALLVRVTLEQTGESVTFPGL
>NZ_CP018758.1|WP_058760342.1|3493829_3494213_+|nucleoside-diphosphate-kinase-regulator
MRHASPITVSAADLPRLERLLDDLPEFGPVAAALDEELARAQVVAPEDIGSVVTMNSRVRCRETDTGKEYQVVLVYPEDAGEAGRVSVLAPAGSALLGATPGERLSWPVPGGKEQQVELLALEPAAS
>NZ_CP018758.1|WP_058760341.1|3494209_3494497_-|hypothetical-protein
MIDHDDDEESFVSSHLIEAVENQLAAGEPVYVQAVLNKLTLVGYERDDAILLMAQALAYEIEAMLNAERPFDSAHYEQLLRALPELPERPEADTD
>NZ_CP018758.1|WP_058760340.1|3494551_3495538_+|magnesium-transporter-CorA-family-protein
MITCYRLSANELVAQPLSPGDALPEDLVWVDLLDPSEEEERYLEQTLAMDIPTREEIAEIEESSRLYQTDQALHLTTTVVSGFSEHQPKATVVNFVLTPEWLVTVRYAELAAFKTFLGKARQEARQHCRSDVIFASLLDSLVDRVADILESVQAHLNRLAQAVFREPVDSPQEKHQPKTDLQSIVKQLGRTNQLLAQLSESLLGINRIVSYLRRTGATWVSGTAKTWFKTLERDVRSLSDYQAKMNGEIGFLLDATLGLISVEQNNIVKVFTIASVLFLPPTLVGTIYGMNFKVMPELDWHFGYPLALGAMVVSALIPYGWFKFRRWL

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Crispr_ID: NZ_CP018758_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018758_9

3771858-3771938

Orphan

Consensus_repeat	Method
TGGGAGAGGACCGGGGTGAGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018758_9

>merge|NZ_CP018758|9|3771858-3771938|CRISPRCasFinder
TGGGAGAGGACCGGGGTGAGGGCCGCCCCCGCCCCTGACTGCTTTCCCCCTCTCCCCTTGGGAGAGGGCCGGGGTGAGGGC

>NZ_CP018758|9|9|3771858-3771938|CRISPRCasFinder
TGGGAGAGGACCGGGGTGAGGGC	CGCCCCCGCCCCTGACTGCTTTCCCCCTCTCCCCT
TGGGAGAGGGCCGGGGTGAGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018758.1\|WP_074529209.1\|3776389_3777022_+\|His-Xaa-Ser-repeat-protein-HxsA	unknown	unknown	gnl\|CDD\|274897
NZ_CP018758.1\|WP_074529212.1\|3782090_3783179_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP018758.1\|WP_074529204.1\|3768759_3769143_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074529201.1\|3762576_3764076_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP018758.1\|WP_074529207.1\|3773672_3775160_+\|His-Xaa-Ser-system-radical-SAM-maturase-HxsB	unknown	unknown	gnl\|CDD\|274896
NZ_CP018758.1\|WP_074529200.1\|3761710_3762526_+\|5-deoxy-glucuronate-isomerase	unknown	unknown	gnl\|CDD\|226241
NZ_CP018758.1\|WP_074529208.1\|3775164_3776403_+\|His-Xaa-Ser-system-radical-SAM-maturase-HxsC	unknown	unknown	gnl\|CDD\|274895
NZ_CP018758.1\|WP_074529205.1\|3772021_3773134_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP018758.1\|WP_058760634.1\|3778772_3779645_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP018758.1\|WP_157772836.1\|3767353_3767518_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018758.1\|WP_074529211.1\|3780591_3782094_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173876
NZ_CP018758.1\|WP_058772654.1\|3760799_3761699_+\|myo-inosose-2-dehydratase	unknown	unknown	gnl\|CDD\|275172
NZ_CP018758.1\|WP_058788042.1\|3767641_3768571_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380524
NZ_CP018758.1\|WP_074529852.1\|3769190_3770744_+\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP018758.1\|WP_074529203.1\|3766067_3767078_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP018758.1\|WP_074529210.1\|3777171_3778776_-\|gamma-glutamyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223482
NZ_CP018758.1\|WP_058772660.1\|3770788_3771814_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP018758.1\|WP_058766298.1\|3779641_3780589_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP018758.1\|WP_074529206.1\|3773369_3773672_+\|His-Xaa-Ser-system-protein-HxsD	unknown	unknown	gnl\|CDD\|274894
NZ_CP018758.1\|WP_074529202.1\|3764089_3766027_+\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	unknown	unknown	gnl\|CDD\|275170

Protein	Function_ID	Function_description	E-value
NZ_CP018758.1\|WP_074529209.1\|3776389_3777022_+\|His-Xaa-Ser-repeat-protein-HxsA	gnl\|CDD\|274897	TIGR03979, His_Ser_Rich, His-Xaa-Ser repeat protein HxsA. Members of this protein share two defining regions. One is a histidine/serine-rich cluster, typically H-R-S-H-S-S-H-R-S-H-S-S-H. Members are found always in the context of a pair of radical SAM proteins, HxsB and HxsC, and a fourth protein HxsD. The system is predicted to perform peptide modifications, likely in the His-Xaa-Ser region, to produce some uncharacterized natural product.	8.62328e-41
NZ_CP018758.1\|WP_074529212.1\|3782090_3783179_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	5.76013e-138
NZ_CP018758.1\|WP_058760634.1\|3778772_3779645_-\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.31747e-106
NZ_CP018758.1\|WP_074529201.1\|3762576_3764076_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP018758.1\|WP_074529207.1\|3773672_3775160_+\|His-Xaa-Ser-system-radical-SAM-maturase-HxsB	gnl\|CDD\|274896	TIGR03978, paired_radical_SAM_protein_1, His-Xaa-Ser system radical SAM maturase HxsB. This model describes the upstream member, HxsB, of a pair of uncharacterized radical SAM proteins, regularly found in the context of a small protein with four or more repeats of the tripeptide His-Xaa-Ser (HXS). This enzyme appears to be part of a peptide modification system.	0
NZ_CP018758.1\|WP_074529200.1\|3761710_3762526_+\|5-deoxy-glucuronate-isomerase	gnl\|CDD\|226241	COG3718, IolB, Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism].	1.57256e-130
NZ_CP018758.1\|WP_074529208.1\|3775164_3776403_+\|His-Xaa-Ser-system-radical-SAM-maturase-HxsC	gnl\|CDD\|274895	TIGR03977, radical_SAM_domain_protein, His-Xaa-Ser system radical SAM maturase HxsC. This model describes the downstream member, HxsC, of a pair of uncharacterized radical SAM proteins, regularly found in the context of a small protein with four or more repeats of the tripeptide His-Xaa-Ser (HXS). This enzyme appears to be part of a peptide modification system.	8.78744e-144
NZ_CP018758.1\|WP_074529205.1\|3772021_3773134_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	7.2576e-78
NZ_CP018758.1\|WP_074529211.1\|3780591_3782094_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173876	cd08511, PBP2_NikA_DppA_OppA_like_5, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP018758.1\|WP_058772654.1\|3760799_3761699_+\|myo-inosose-2-dehydratase	gnl\|CDD\|275172	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase. Members of this family include the enzyme myo-inosose-2 dehydratase, product of the gene iolE, as found in inositol utilization cassettes in many species. [Energy metabolism, Sugars].	3.07206e-155
NZ_CP018758.1\|WP_058788042.1\|3767641_3768571_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380524	cd06301, PBP1_rhizopine_binding-like, periplasmic binding proteins specific to rhizopines. Periplasmic binding proteins specific to rhizopines, which are simple sugar-like compounds produced in the nodules induced by the symbiotic root nodule bacteria, such as Rhizobium and Sinorhizobium. Rhizopine-binding-like proteins from other bacteria are also included. Two inositol based rhizopine compounds are known to date: L-3-O-methly-scyllo-inosamine (3-O-MSI) and scyllo-inosamine. Bacterial strains that can metabolize rhizopine have a greater competitive advantage in nodulation and rhizopine synthesis is regulated by NifA/NtrA regulatory transcription activators which are maximally expressed at the onset of nitrogen fixation in bacteroids. The members of this group belong to the pentose/hexose sugar-binding protein family of the type 1 periplasmic binding protein superfamily.	5.92224e-125
NZ_CP018758.1\|WP_074529852.1\|3769190_3770744_+\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP018758.1\|WP_074529203.1\|3766067_3767078_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.28378e-61
NZ_CP018758.1\|WP_074529210.1\|3777171_3778776_-\|gamma-glutamyltransferase-family-protein	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
NZ_CP018758.1\|WP_058772660.1\|3770788_3771814_+\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	4.46954e-88
NZ_CP018758.1\|WP_058766298.1\|3779641_3780589_-\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	3.18081e-130
NZ_CP018758.1\|WP_074529206.1\|3773369_3773672_+\|His-Xaa-Ser-system-protein-HxsD	gnl\|CDD\|274894	TIGR03976, hypothetical_protein, His-Xaa-Ser system protein HxsD. This rare conserved hypothetical protein of small size occurs exclusively, and perhaps universally, in the context of a pair of (uncharacterized) radical SAM proteins, TIGR03977 and TIGR03978. Many members of this family have invariant motifs LYW and LLNDYxLRE, but PSI-BLAST starting from family members well below 20 % pairwise sequence identity to this group eventually brings in the entire family as modeled here. The family TIGR03979 represents the fourth regularly conserved member of this system.	2.66928e-16
NZ_CP018758.1\|WP_074529202.1\|3764089_3766027_+\|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	gnl\|CDD\|275170	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase. Members of this protein family, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase (iolD), represent one of eight enzymes in a pathway converting myo-inositol to acetyl-CoA. IolD hydrolyzes the cyclic molecule 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione to yield 5-deoxy-D-glucuronic acid. TPP is a cofactor. [Energy metabolism, Sugars].	0

>NZ_CP018758.1|WP_058772660.1|3770788_3771814_+|ABC-transporter-permease
MSAILDKKTAEPSAPRSRRRIPTELGILMVLLGIGLVFEAFGWVLRDQSFLLNSQRLVLIILQVSVIGLLAIAVTQVIITTGIDLSSGSVLALSAMVAASLAQTSDFGRAVFPSLTDLPVWVPVMAGLGVGLLAGAINGSIIAVTGIPPFIATLGMMVSARGLARFYTDGQPISMLSDSYTAIGAGAMPVIIFLAVAVIFHIALRYTKYGKYTYAIGGNMQAARISGINVKKHLIIVYSIAGLLSGLAGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMTSGFTFLGVDAYIQDIIKGLIIVVAVVIDQYRSKRKAKR
>NZ_CP018758.1|WP_074529852.1|3769190_3770744_+|sugar-ABC-transporter-ATP-binding-protein
MLSSATTAAPAVPPTAAASSDYLLEIIDVTKEFPGVKALSHVQLRVRPGTVLALMGENGAGKSTLMKIIAGIYQPDAGEIRLRGAPVRFETPLQALQSGIAMIHQELNLMPFMTIAENIWLGREPLNALHLVDHGKMRRQTQALLDRLRIRLDPDEAVGELSIAGRQMVEIAKAVSYDSDVLIMDEPTSAITETEVAHLFSIIADLKAQGKGIVYITHKMDEVFQIADEVAVFRDGQYIGLQRADSMNGDGLITMMVGRELNQLFPERTAPRDEVLLSVRDLGLAGVFSGVSFDLHAGEVLGIAGLMGSGRTNVAETLFGVTPATAGEIHIDGQPVRMSDPCLAIQKGLALLTEDRKDTGIFPCLTVGENMEVAVLSGFAHGGFVQQRRLDDLCEEMRQQLRVKTPSLDQCIANLSGGNQQKALIARWLMTQPRILILDEPTRGIDVGAKAEIYRLIAKLAAEGLAVIMISSELPEVLGMSDRVMVMHEGTVTGFLDRSEATQERVMHLASGNPVFH
>NZ_CP018758.1|WP_074529204.1|3768759_3769143_+|hypothetical-protein
MTSAPSALVPVRIPLACCLGLLLTFSGVAVAELRIAATLGNPDPYSAPQVVALSLTPAATARQSAEPSRGAGIFRASLDRRLDVDRLPARGLVRGTHDHIASRQRLGDPRRSLHLVTLDNPQQFQRL
>NZ_CP018758.1|WP_058788042.1|3767641_3768571_+|sugar-ABC-transporter-substrate-binding-protein
MPFKPRLAALAVSLLLASTSVLADLKIGVSMPTFDDNYLTYLREDMSKKAKQDGIQLQFEDARNDVVKQLNQVQSFINQKVDAVIVNPVDTAATRNIIESATKAGIPLVFVNRKPNDPKLPLGVVTVTSNDREAGHLQAQYLADKLGGKGQVAILLGELSNNSTQVRTAGFKEILAKYPGIKIIDEQTGLWLRDKGMDLTSNWLLAGKEIDAILSNNDEMAIGAAMALKQAGKKNVLVGGVDGTPDALAAIKRGLMTVSVFQDAKGQADGAIEAAEKLIKKEPVDQNITIPYQLITPDNVAEFQAKLKQ
>NZ_CP018758.1|WP_157772836.1|3767353_3767518_+|hypothetical-protein
MKTSVSPSLSSVPSAEAAPPLPAILGWLLRLCSHEQSGAVIGAMPGAPVLYRLK
>NZ_CP018758.1|WP_074529203.1|3766067_3767078_+|Gfo/Idh/MocA-family-oxidoreductase
MTLNIGVIGTGAIGREHIRRLSHTLLGSCVVAVTDINAEQATRVVQELGIAAEVYPDGHALIAAADVQAIVVASWGPTHEEYVLAAIAAGKPVFCEKPLATTAAGCKRIVEAEQAHGKRLVQVGFMRPYDAGYRQLKAVVDAGRIGAPLMIHAAHRNPTVSEHYSTDMAITDTLIHEINVLAWLLDDHYVSAQVVFPRKAPAAREHLRDPQVVLLETAKGVRIDVEVFVNCQYGYDIQCEIVGERGIARLPEPTSVQLRSEARLSNEILMDWKDRFIAAYDVELQAFIDDLAAGGLTGPSSWDGYIAAVTADACVKAQDSGAIEPIGLPSRPAFYG
>NZ_CP018758.1|WP_074529202.1|3764089_3766027_+|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)
MSTQRLTMAQALVKFLDNQYLSVDGVETKFVAGIFTIFGHGNVLGLGQALEQDAGDLVVHQGRNEQGMAHAATGFAKQKLRRQIYACTSSVGPGAANMLTAAATATANRIPLLLLPGDVYASRQPDPVLQQIEQFHDLSISTNDAFRAVSKYWDRINRPEQLMSAAINAMRVLTDPAETGAVTLALPQDVQGEAYDYPDYFFAKRVHRLDRRPPVAAAIEEAVQLLRRKRKPLLICGGGVKYSGAAAALQRFAERFEIPFAETQAGKSAIVSSHELNVGGIGETGCLAANLLAKEADLIIGVGTRYTDFTTSSKWLYQHPEVEFLNLNVAAFDAGKLDGLAVVADAREALLALTEALAASDYRAGWGAQVGEARERYRQEVERVYAVGYTGADFVPEIDDDLPRAVLEEFVRLTGSSLTQSQVLGRLNARLDDDAIIVAAAGSLPGDLQRAWQSKGVNTYHLEYGYSCMGYEINAALGVKLAEPEREVYALVGDGSYQMLHSELATSIQERRKINVVLLDNMTFGCINNLQVGHGMGSFGTEFRYRNPETGKLDGDFVPVDFAMSAAAYGCKTYRVRSLEELEAALTDARRQSVSTLIDIKVLPKTMLHGYLSWWRVGGAEVSTSEKIAAVARVLQEKAAQARQY
>NZ_CP018758.1|WP_074529201.1|3762576_3764076_+|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MSDTPVIGHYINGEVSTQAERFSDVFNPAEGVVKARVAQATVQTVDQAVAAAKAAFPEWSEQSALRRARILFRFKELLDQHHKELAATITSEHGKVLSDAMGEVTRGIEVVEFACGAPHLAKTSYTDNIGGGIDNWSLRQPLGVCAGITPFNFPVMVPLWMIPMALATGNTFILKPSERDPSASLMLADLLKQAGLPDGVFNVVQGDKVAVDALLQHPNVEAISFVGSTPIAEYIHQEGTRRGKRVQALGGAKNHMIVMPDADLDQAADALIGAGYGSAGERCMAISIAVAVGEVGDALIEKLLPRIDALRVRNGVESDADMGPLVTGQHKAKVEGYITKGVEEGAKLLVDGRNFKVPGAENGFFVGATLFDGVTPEMTIYKEEIFGPVLGIVRVPDFASAVALINAHEFGNGVSCFTSDGGIARAFARTIKVGMVGINVPIPVPMAWHSFGGWKRSLFGDHHAYGEEGLRFYTRYKSVMQRWPDSIAKGAEFSMPTAK
>NZ_CP018758.1|WP_074529200.1|3761710_3762526_+|5-deoxy-glucuronate-isomerase
MNLLVKADRSARDLVRVPAGALEYVGFAAHRLQPGESLPVVAGDLEVCIVLLSGGASIEGGHSQLGDFAWRGLAGRQSVFEDVSPYAAYLPPGSEARVTADSAAEIAVCTSPGNPVASEWLPPRLIEPASMARSTRGKGANTRYVCDILPDTAAAHSLLVVEVRTPSGHSSSYPPHRHDRDNLPEESLLEESYYHRIDPGQGFVFQRVYTDERDLDQAMAVEDHDVVLVPRGYHPVSVPYGYESYYLNVMAGPKRIWKFHNDPQHEWLLSR
>NZ_CP018758.1|WP_058772654.1|3760799_3761699_+|myo-inosose-2-dehydratase
MTAQQRLKIGINPISWANDDLPALGGDTPLETILREGKEIGFQGFELGGKFPSEPKALGAVLGQHGLELVSGWYSSGLAHRDVEAEIEAIRPHCRLLAENGAKVLVYGEVAGSIQGQRIPLIERPRFHSDAAWQAYAEKLDRLAAFTLSQGLRLAYHHHMGAYVESPEDIARLMALTSKDVGLLFDAGHCYMGGGDPLSVLQQHLDRVCHVHFKDVRKSVVQLARNHQWSFPDCILNGTFTVPGDGDIDFSALLKVLVAGGYEGWLVVEAEQDPAVAPAYEYAKKGYDHLRQLVAQATA
>NZ_CP018758.1|WP_074529205.1|3772021_3773134_+|Gfo/Idh/MocA-family-oxidoreductase
MRDLGIGLIGTGFMGHAHAQAFQHAASSFTLPVRPRLVALADADPERAARCAADWGFTRSCDWERLIADPQVELVAITTPNLLHAPMALAALAAGKAVYCEKPLAVSLEEATRMRDAARQAGVVNRVGYNYLQNPMLKQARELIESGELGEIVSFSGEFSEDFMGDPQGPFTWRCETRQAGGALADLGSHILSLARFLLGPVTALCADLHTAHGQRPHQGGTRAVEIDDQAHLLLRFAGGARGTLATSWLKHGRKNRLAVEVCGTRGTLVFDQERLNELRLYQVGDRPGLAGFRTLLAGPHLADYAAFCPAPGHQLGYNELKTLEVRSLLEALGGNPGHTGVDFQEAWEVERLAQAARQSAQEERWVRLD
>NZ_CP018758.1|WP_074529206.1|3773369_3773672_+|His-Xaa-Ser-system-protein-HxsD
MTWPVTLLLDPTLYSLNCVQRAIYSLADRLVIQLKTSNGELCIEALPAPQDCISQQPSPDFARALLLQQLNDFALRERIQQETAGLHELLVKAALSGCIR
>NZ_CP018758.1|WP_074529207.1|3773672_3775160_+|His-Xaa-Ser-system-radical-SAM-maturase-HxsB
MTNLIAMQGGYRLLPFRFLRLAGESPREILLTTDTGEYIFLAEEQLRALIDRQLRPGTALYKDLLARHFIYEPNGHDPLPEMAAQYLSRKDFLKQGPALHLFVTTLRCNHTCQYCQVSRAPLGGSGHDMSEMDARHAVSRMFESSSDVLTVEFQGGEPLLAFPRIRQIVEEVVARNSSEKRSVQFVITSTLHHLDESILDFAAMHRIQFSTSLDGPAALHNANRPTPTRDAYERTVEGIHRVRARLGPDAVSALTTLTARSLEQPEAIIDEYVRQGLTSISLRPLSPYGFATKSAQRLAYPMARYLAFYRRALDYLLTLNSQGTYLVESYTALLLNNVLTPFSSGYVDLRSPLGAGLGALVYNYDGDVYPSDEARMLVEMGERGLCLGNVRQPLHELLASPVMQLLLASGIAETLPGCNDCALVPYCGSDPIEHYARQGDPVGHRAFSAFCQKNMALLRHLFVLLRDGSEETQRVLLSWLSRRSLADVSLPGYRG
>NZ_CP018758.1|WP_074529208.1|3775164_3776403_+|His-Xaa-Ser-system-radical-SAM-maturase-HxsC
MLAKETQFLIRNLHEPRLLKVITAAEFVEHGLARCAGRVELGDVLLYLDDSVGSLHLGLLAMPVAGFMCDSVFDGDIPQGRIFLSECRIPGVVRSGDVVALSPASNLVRVLYRRGANSNLLFMTDRCNSLCLMCSQPPKDIDDRWHIEENLRLLDLMDAGEEHIGISGGEPTLYREGLLVILNKAKSVIPDKALHLLSNGRLLQDPTWIGDLKSLDHPKLSWGIPLYADNAGDHDQLVQAPGAFSETLRGLYNLARANQVVEIRIVLNRLTAPRLAQLALFLFRNLPFVRHVAFMGIESTGLARKHHTELWIDPLDYQLELSEAVFFLHHRGIPVSLYNLPLCLVSPPLRLFARQSISDWKNLFMDACQDCAAVTRCSGFFKSHNERWQSRGIRPLAAEALSSSQGARHESA
>NZ_CP018758.1|WP_074529209.1|3776389_3777022_+|His-Xaa-Ser-repeat-protein-HxsA
MSLLDRWKMLIGHVTLLPVAGSALAQADQMPLADMTWSANPGNQIPVFSNPLNALDATNLYAAHRSHSSHRSHSSHSSHYSGSGGYSSPRSYSAPSSSDSSYRAPNSGSSGASSYSGSSGLYAPSKSNGTSTTGSNTTSGKAQPTGEALSSLVMRVQTALTLKQYYHGAIDGVLGKSTRGALMSFQMDTGLTINGRMDTPTLNALGIRIP
>NZ_CP018758.1|WP_074529210.1|3777171_3778776_-|gamma-glutamyltransferase-family-protein
MRSLPMPDLDYHNPYSSARSPVMGRNLVACSQPLAAQAGVEMLRRGGNAVDAAVAAAMVLTVVEPTGCGIGSDAFAIVWDGKQVQGLNASGRAPRGWTPEYFAGQSAMPARGWGAVTVPGAVSAWVALAQRYGKLPLTTLAGPAIHYARDGFLLTPVIAELWRRGAEQLKDQPGFAACFLANGVPRAGTLVRLPDHARTLEAIAESAGAAFYQGELAQAMARHAREHGAVLDEEDLRAHRADWIDTLSVPFAGAVVHELPPNGQGIATLAGLGILEAAGIGADPVDSPATLHRAIEAMKLGLADLYQHVTDSAHMRVQAEHLLDPAYLRERAGLIGPRAGDPGYGAPRPGGTVCLSAADDSGMMISFIQSNYMGFGSGVVVPGTGISLQNRGAGFTLAPDHVNSVAPGKRPFHTIIPGFAMNADGTPLMAFGLMGGPMQAQGHLQLMLRILKYRQNPQAAADAPRWRLEGGRRVAVESSLDPTTLAALRALGHEVTVEEPSGVFAFGGAQIIQRVAGGYVGGSDPRKDGLVAGY
>NZ_CP018758.1|WP_058760634.1|3778772_3779645_-|ABC-transporter-permease
MNALTLPRPATLKPARSPFWRKFSANRGALLGAALILIFALAALLAPWLAPFDPLKTSFLAVRKAPSALNWLGTDELGRDLLSRLLWGARSSLLAGVVSVAIALLVGVPLGLVAGYFGGWLDALVSRLVEALLSCPFLVLAIALGAFLGPSLGNAMIAIGLSAMPVFARLTRGQVLAIRHEDYLEGARAIGLPDRWILWRYVLPNILSPLVVQATLTIAAAILAEASLSFLGLGQQPPMPSWGSMLNTAKNFMEQAPWMSIAPGVCIYLTVLGFNLLGDGLRDALDPRHQ
>NZ_CP018758.1|WP_058766298.1|3779641_3780589_-|ABC-transporter-permease
MLRLFLRGLLSALPTLLLVSLFVFTLQQLLPGDPVLAMAGEERDPQVLEFLREKYRLNDPLPVQYLHWMGGVLRGDLGISLRTDQPVTALIAEKLPVTLELSLLAILIALAIGIPTGILAAVRRGTAVDYGANLVALSGISIPHFWLGILLILLFAVKLQWLPASGFVPFHEDPLRNLRTLILPAFVLGAGLSGTLMRHTRAAMLEVLRADYVRTARAKGLRERVVILRHALRNALMPIVTLTTLLFGELLGGAVLTEQVFSIPGFGKMIVDAVFNRDYAVVQGVVLCVAVGFVLLNLVADLLYRLINPRLRQAA
>NZ_CP018758.1|WP_074529211.1|3780591_3782094_-|ABC-transporter-substrate-binding-protein
MKASAWLTATLLLLAGGSAVAETTLRIGIQDDPDVLDPHRSRTYSGRLVYTALCDKLVDVSPQLELVPQLATAWQWSDDNRSLTLQLRPGVTFHDGETFDAAAVKFNLDRARTLPDSLRKSELASVDTVEVVDPQTVRIRLKQPDATLLAQLSDRAGMMLAPKASAGDVGSKPVCSGPYRFVQRVQQDRIVLERFPQYWNAAAYHFDKVVFLPIPDTSVRLANLRSGDLDIIERVAPTDVKALQGQAGFTLYNTPGLGYMQLMVNMANGDRAKNPFAGDKRVRQAFDLALDREALNQVVFEGLYAPSVQPFPQSSPYYDKAFAVPARDVARSQALLKAAGVSLPVKVELKIANNPIAQQVGQLIQAMAAEAGFEVNLVATEYATLLAEQHAGNFQLGLSAWSGRPDPDGNVHQFVTCKGNQNDGHYCNAALDQLLNQARTTNDQAQRQALYAQAMTLLREELPVFYLYFDPRIIATRADIKGLIPNPDGLIRLAGVSRGQ
>NZ_CP018758.1|WP_074529212.1|3782090_3783179_-|ATP-binding-cassette-domain-containing-protein
MTAVERPILEAIGLTKHFGGQAGFLQRPRPPVQAVSDVSFAVRRGETLALVGESGSGKSTLGRLLLNLLAPTAGDVIYEGRNLGNLSPAALRQVRQELQIIFQDPFASLNPRMSVADIVGEPVWLHKPLNRGQRAERVAELLRTVGLAPELAGRYPHEFSGGQRQRIGIARALAAEPRLLLGDEPVSALDVSVQAQVVNLLEDLKARFGLTLIIVAHGLGVIRHMSDRVAVMYLGEIVELAPVEALFETPLHPYTQALLAAVPVSHPRARRPRTLLGGDLPSPTAPPSGCRFHTRCPHARPLCREAKPLLEATSGEARVACHFWREIAGAGAAPPPVIASSPAFTRRLALFNRHQSLLESTP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018758_5	5.1\|2322590\|33\|NZ_CP018758\|CRISPRCasFinder	2322590-2322622	33	NZ_CP032350	Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence	159406-159438	7	0.788
NZ_CP018758_8	8.1\|3488104\|28\|NZ_CP018758\|CRISPRCasFinder	3488104-3488131	28	MN033123	Leviviridae sp. isolate H4_Bulk_Litter_23_scaffold_211 hypothetical protein (H4BulkLitter23211_000001), hypothetical protein (H4BulkLitter23211_000002), and RNA-dependent RNA polymerase (H4BulkLitter23211_000003) genes, complete cds	598-625	7	0.75
NZ_CP018758_4	4.1\|2207474\|39\|NZ_CP018758\|CRISPRCasFinder	2207474-2207512	39	NC_012855	Ralstonia pickettii 12D plasmid pRp12D01, complete sequence	38709-38747	9	0.769
NZ_CP018758_4	4.1\|2207474\|39\|NZ_CP018758\|CRISPRCasFinder	2207474-2207512	39	NC_019847	Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence	132076-132114	9	0.769
NZ_CP018758_1	1.5\|1266248\|31\|NZ_CP018758\|CRISPRCasFinder	1266248-1266278	31	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	162575-162605	10	0.677

1. spacer 5.1|2322590|33|NZ_CP018758|CRISPRCasFinder matches to NZ_CP032350 (Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.788

caccccgccccaccaagcgccgtaggttggcgc	CRISPR spacer
caccccgccccaccaaacgccgaagaccagccc	Protospacer
****************.***** **....** *

2. spacer 8.1|3488104|28|NZ_CP018758|CRISPRCasFinder matches to MN033123 (Leviviridae sp. isolate H4_Bulk_Litter_23_scaffold_211 hypothetical protein (H4BulkLitter23211_000001), hypothetical protein (H4BulkLitter23211_000002), and RNA-dependent RNA polymerase (H4BulkLitter23211_000003) genes, complete cds) position: , mismatch: 7, identity: 0.75

accgtgttggaggggcaagccattcgca	CRISPR spacer
tccgtgatggaggggcaggccatttcgt	Protospacer
 ***** **********.******.

3. spacer 4.1|2207474|39|NZ_CP018758|CRISPRCasFinder matches to NC_012855 (Ralstonia pickettii 12D plasmid pRp12D01, complete sequence) position: , mismatch: 9, identity: 0.769

agccggtgaaggagatcttgcgcacgatggggctttcgg	CRISPR spacer
agccggtaaaggaaatcttgcgcacgatgggcgagcgga	Protospacer
*******.*****.*****************    . *.

4. spacer 4.1|2207474|39|NZ_CP018758|CRISPRCasFinder matches to NC_019847 (Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence) position: , mismatch: 9, identity: 0.769

agccggtgaaggagatcttgcgcacgatggggctttcgg	CRISPR spacer
atccggtgaaggagatcttgcgaacgatcggtgatcgga	Protospacer
* ******************** ***** **   *. *.

5. spacer 1.5|1266248|31|NZ_CP018758|CRISPRCasFinder matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 10, identity: 0.677

aaacaaccctcctttcctgtccttcggacca	CRISPR spacer
tggacgccctcctttcctgcccttgggacgc	Protospacer
 ..  .*************.**** ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

185286 : 193354

uncultured_Caudovirales_phage(85.71%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058762050.1\|185286_186564_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.8e-98	53.8
WP_074527704.1\|186563_187955_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_074527705.1\|187957_188959_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_074527706.1\|189023_190007_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	3.3e-123	65.4
WP_058762054.1\|190003_190318_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	2.1e-31	66.7
WP_058779735.1\|190320_190620_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_058762056.1\|190616_190973_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.5e-17	48.3
WP_058762057.1\|190974_191370_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.8e-41	63.1
WP_058762058.1\|191419_192088_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.2e-79	72.6
WP_074529756.1\|193135_193354_-	DUF4224 domain-containing protein	A0A2H4JF29	uncultured_Caudovirales_phage	1.9e-15	58.0

DBSCAN-SWA_2

605357 : 615130

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074527890.1\|605357_607169_-	gamma-glutamyltransferase family protein	Q5GF27	Diachasmimorpha_longicaudata_entomopoxvirus	6.3e-11	26.1
WP_058784297.1\|607401_607905_-	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_058768452.1\|607901_608738_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_074529769.1\|609005_609569_+	nicotinamide mononucleotide transporter	A0A140B3H4	Vibrio_phage	3.1e-09	24.6
WP_074527891.1\|609565_610093_+	AAA family ATPase	NA	NA	NA	NA
WP_074527892.1\|610130_610685_+	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	4.2e-14	32.4
WP_058778153.1\|610748_611297_+	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	2.9e-60	64.4
WP_074527893.1\|611358_611664_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_074527894.1\|611843_612392_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	4.7e-26	41.9
WP_058765175.1\|612602_613556_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_074527895.1\|613567_615130_+	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.9e-12	27.1

DBSCAN-SWA_3

1440051 : 1448646

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074528260.1\|1440051_1440966_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.9e-36	34.5
WP_074528261.1\|1440962_1441499_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.7e-58	63.7
WP_058761294.1\|1441498_1442380_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.6e-105	64.5
WP_058761295.1\|1442451_1443516_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.3e-98	52.4
WP_074528262.1\|1443737_1445720_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	3.5e-15	24.2
WP_081321766.1\|1445730_1446780_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_074528263.1\|1446776_1447751_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_058773025.1\|1447891_1448113_-	hypothetical protein	NA	NA	NA	NA
WP_007160396.1\|1448358_1448646_-	integration host factor subunit beta	G3M9Y0	Bacillus_virus	1.6e-09	39.1

DBSCAN-SWA_4

2738406 : 2746804

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058761494.1\|2738406_2738631_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	5.0e-19	56.8
WP_058767837.1\|2738641_2739046_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	F8WQ19	Bacillus_phage	5.9e-10	35.0
WP_074528795.1\|2739027_2741169_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.8e-204	49.0
WP_058761492.1\|2741179_2742160_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0M4S3B4	Mycobacterium_phage	6.4e-135	73.4
WP_074528796.1\|2742595_2744134_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
WP_058779554.1\|2744130_2744637_+	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A2P1EI66	Megavirus	1.7e-14	29.4
WP_074528797.1\|2744755_2746804_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	7.3e-40	28.9

DBSCAN-SWA_5

3237252 : 3274409

Serratia_phage(16.67%)

holin,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074529025.1\|3237252_3238584_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_074529026.1\|3238587_3239058_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_058766901.1\|3239059_3240247_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_058794424.1\|3240402_3241896_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_074529027.1\|3241892_3244421_-	type VI secretion system ATPase TssH	A0A1S6UBG5	Serratia_phage	2.2e-86	33.5
WP_074529028.1\|3244436_3245447_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_074529029.1\|3245410_3247195_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_058762305.1\|3247199_3247604_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_058766906.1\|3247610_3249089_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_058794419.1\|3249103_3249598_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_157772829.1\|3249627_3251133_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_058762309.1\|3251516_3252191_-	JAB domain-containing protein	NA	NA	NA	NA
WP_074529031.1\|3252329_3253553_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	5.4e-38	31.1
WP_058794417.1\|3253545_3254001_+	dUTP diphosphatase	Q2NP83	Xanthomonas_phage	6.6e-50	61.2
WP_074529032.1\|3254046_3256596_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	5.3e-56	29.8
WP_058762313.1\|3256670_3257573_+	acetylglutamate kinase	NA	NA	NA	NA
WP_074529033.1\|3257633_3258485_-	DUF1989 domain-containing protein	NA	NA	NA	NA
WP_058787881.1\|3258518_3259184_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_058762316.1\|3259416_3260013_-	hypothetical protein	NA	NA	NA	NA
WP_058762317.1\|3260193_3260835_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
WP_058762318.1\|3260915_3261695_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_074529034.1\|3261813_3263142_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_074529035.1\|3263183_3263612_-	universal stress protein	NA	NA	NA	NA
WP_058773771.1\|3263695_3265054_-	PAS domain S-box protein	NA	NA	NA	NA
WP_058763061.1\|3265267_3266521_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	2.0e-101	53.0
WP_058768398.1\|3266600_3267851_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_058763066.1\|3267862_3268162_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_074529036.1\|3268158_3271179_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_058763070.1\|3271194_3271824_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_058763072.1\|3271924_3272782_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_058768395.1\|3273173_3274409_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-25	35.1

DBSCAN-SWA_6

4080052 : 4148226

uncultured_Caudovirales_phage(27.5%)

tail,holin,plate,integrase

attL 4115833:4115870|attR 4149549:4149586

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099049476.1\|4080052_4080745_+\|holin	phosphatidylcholine synthase	NA	NA	NA	NA
WP_058763318.1\|4080747_4081068_+	GIY-YIG nuclease family protein	A0A2I7QNM5	Vibrio_phage	2.0e-05	39.2
WP_074529326.1\|4081055_4081994_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_074529327.1\|4082057_4082678_-	flavin reductase family protein	NA	NA	NA	NA
WP_074529328.1\|4082688_4083159_-	metallophosphoesterase family protein	NA	NA	NA	NA
WP_074529329.1\|4083168_4084698_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_074529330.1\|4084780_4085695_-	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_058763329.1\|4085694_4086120_-	hypothetical protein	NA	NA	NA	NA
WP_074529331.1\|4086366_4088871_+	ATP-dependent helicase HrpB	A0A2H4UU36	Bodo_saltans_virus	8.4e-22	24.9
WP_058763331.1\|4088894_4089635_-	hypothetical protein	NA	NA	NA	NA
WP_074529333.1\|4089977_4090808_+	oxidoreductase	NA	NA	NA	NA
WP_074529334.1\|4090820_4091759_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_074529335.1\|4091871_4092300_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_074529336.1\|4092303_4093512_-	amino acid deaminase	NA	NA	NA	NA
WP_074529337.1\|4093508_4094282_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_058768196.1\|4094296_4094683_-	RidA family protein	NA	NA	NA	NA
WP_074529338.1\|4094711_4095488_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-31	38.9
WP_074529339.1\|4095484_4096147_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_074529340.1\|4096157_4096820_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_037007680.1\|4096868_4097705_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_074529341.1\|4097915_4099379_-	D-aminoacylase	NA	NA	NA	NA
WP_074529342.1\|4099576_4101595_+	methyl-accepting chemotaxis protein	A0A1B0VAH3	Salmonella_phage	1.1e-06	37.3
WP_058784083.1\|4101887_4103909_+	methyl-accepting chemotaxis protein	A0A1B0VAH3	Salmonella_phage	3.4e-05	37.3
WP_058763356.1\|4104005_4104437_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	9.1e-17	37.0
WP_074529343.1\|4104429_4105701_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	7.6e-96	46.7
WP_058763371.1\|4105716_4107822_-	TonB-dependent receptor	NA	NA	NA	NA
WP_058763373.1\|4107833_4109048_-	MFS transporter	NA	NA	NA	NA
WP_074529344.1\|4109037_4110951_-	siderophore synthetase	NA	NA	NA	NA
WP_074529345.1\|4111058_4112453_-	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA
WP_074529346.1\|4112795_4114973_+	PAS domain-containing hybrid sensor histidine kinase/response regulator	W8CYM9	Bacillus_phage	4.3e-06	36.4
WP_074529856.1\|4115101_4115494_+	RidA family protein	NA	NA	NA	NA
4115833:4115870	attL	NA	NA	NA	NA
WP_058763381.1\|4116024_4117221_+\|integrase	integrase family protein	A0A248SL35	Klebsiella_phage	8.4e-36	30.6
WP_058763383.1\|4117229_4117433_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_074529857.1\|4117519_4120357_-	bifunctional DNA primase/helicase	A0A2H4J936	uncultured_Caudovirales_phage	0.0e+00	63.7
WP_074529347.1\|4120368_4120590_-	hypothetical protein	NA	NA	NA	NA
WP_074529348.1\|4120586_4120832_-	hypothetical protein	A0A2H4JGL7	uncultured_Caudovirales_phage	4.4e-08	47.1
WP_074529349.1\|4120908_4121106_-	hypothetical protein	NA	NA	NA	NA
WP_058794958.1\|4121102_4121399_-	transcriptional regulator	Q9ZXJ1	Pseudomonas_virus	2.0e-23	55.3
WP_058777467.1\|4121450_4121681_-	DNA-binding protein	NA	NA	NA	NA
WP_058763395.1\|4121765_4122107_+	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	8.2e-21	47.7
WP_058777468.1\|4122237_4122459_+	hypothetical protein	NA	NA	NA	NA
WP_074529351.1\|4122550_4123834_-	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	2.3e-124	54.7
WP_058763401.1\|4123830_4124274_-\|tail	phage tail protein	Q9ZXJ9	Pseudomonas_virus	2.9e-50	66.7
WP_074529352.1\|4124279_4126553_-	hypothetical protein	A4PE52	Ralstonia_virus	1.2e-75	40.0
WP_074529353.1\|4126542_4126662_-\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	1.4e-07	64.1
WP_058763405.1\|4126670_4126976_-\|tail	phage tail assembly protein	E5FFG7	Burkholderia_phage	1.2e-20	56.0
WP_058768225.1\|4127029_4127545_-\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	6.1e-68	74.3
WP_058778840.1\|4127589_4128756_-\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	2.2e-158	71.2
WP_081375614.1\|4128929_4129355_-	hypothetical protein	NA	NA	NA	NA
WP_081375615.1\|4129365_4131309_-	hypothetical protein	F1BUK3	Cronobacter_phage	5.0e-14	52.6
WP_099049477.1\|4131854_4133063_-\|tail	phage tail protein	A0A077K818	Ralstonia_phage	6.7e-33	42.3
WP_074529859.1\|4133566_4134133_-\|tail	phage tail protein I	V5YTN0	Pseudomonas_phage	1.2e-21	53.8
WP_074529355.1\|4134125_4135031_-\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	7.2e-72	50.2
WP_058763420.1\|4135258_4135690_-	hypothetical protein	A0A2H4J973	uncultured_Caudovirales_phage	2.1e-42	54.3
WP_058763422.1\|4135686_4136229_-	hypothetical protein	NA	NA	NA	NA
WP_074529356.1\|4136238_4137363_-	hypothetical protein	A0A0M3ULH6	Salmonella_phage	7.3e-50	64.2
WP_074529357.1\|4137359_4137974_-\|tail	phage tail protein I	A0A2H4JAU2	uncultured_Caudovirales_phage	3.8e-69	64.4
WP_074529358.1\|4137976_4138885_-\|plate	baseplate assembly protein	Q9ZXK8	Pseudomonas_virus	3.7e-84	56.0
WP_058773325.1\|4138881_4139226_-\|plate	baseplate assembly protein	A0A2H4JE52	uncultured_Caudovirales_phage	1.5e-25	51.4
WP_074529359.1\|4139222_4139813_-\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	6.3e-53	65.6
WP_074529360.1\|4139881_4140163_-\|tail	phage tail protein	D5LGY9	Escherichia_phage	5.5e-23	59.3
WP_074529361.1\|4140173_4141568_-\|tail	phage tail protein	D5LGZ0	Escherichia_phage	7.8e-126	53.1
WP_058778851.1\|4141692_4142247_-	DUF4376 domain-containing protein	A0A2H4JF49	uncultured_Caudovirales_phage	3.5e-37	60.0
WP_074529362.1\|4142243_4143875_-	exo-alpha-sialidase	NA	NA	NA	NA
WP_074529363.1\|4143867_4144503_-\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	2.8e-38	46.2
WP_058773332.1\|4144495_4145419_-\|plate	baseplate assembly protein	A0A088FQL4	Escherichia_phage	9.8e-85	56.2
WP_074529364.1\|4145619_4146135_-\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	1.2e-28	44.8
WP_157772837.1\|4146118_4146274_-	hypothetical protein	K4PAX1	Burkholderia_phage	3.7e-05	57.1
WP_157772838.1\|4146230_4146665_-	hypothetical protein	NA	NA	NA	NA
WP_074529365.1\|4146661_4146859_-	hypothetical protein	NA	NA	NA	NA
WP_074529366.1\|4146855_4147668_-	DUF3380 domain-containing protein	A0A2H4JGJ9	uncultured_Caudovirales_phage	1.6e-70	56.5
WP_058763537.1\|4147664_4147979_-\|holin	phage holin, lambda family	A0A2H4J1U5	uncultured_Caudovirales_phage	8.1e-23	47.7
WP_058778858.1\|4148001_4148226_-\|tail	phage tail protein	A0A2H4J946	uncultured_Caudovirales_phage	2.9e-14	58.6
4149549:4149586	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018759

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018758

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection