Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011420 Paenibacillus polymyxa strain ATCC 15970, complete genome 1 crisprs WYL,csa3,DEDDh,DinG,cas3 0 1 8 0

Results visualization

1. NZ_CP011420
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP011420_1 3402076-3402184 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP011420_1 1.1|3402096|29|NZ_CP011420|PILER-CR 3402096-3402124 29 NZ_CP021133 Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence 13740-13768 8 0.724
NZ_CP011420_1 1.1|3402096|29|NZ_CP011420|PILER-CR 3402096-3402124 29 NZ_CP016850 Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence 94762-94790 8 0.724

1. spacer 1.1|3402096|29|NZ_CP011420|PILER-CR matches to NZ_CP021133 (Pseudomonas fragi strain NMC25 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

gtcgccacttacacttttcgtaactcctg	CRISPR spacer
ttcgccacttccaattttcgtaacgaaga	Protospacer
 ********* ** **********    .

2. spacer 1.1|3402096|29|NZ_CP011420|PILER-CR matches to NZ_CP016850 (Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence) position: , mismatch: 8, identity: 0.724

gtcgccacttacacttttcgtaactcctg	CRISPR spacer
ttcgccacttccaattttcgtaacgaaga	Protospacer
 ********* ** **********    .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 543848 : 575613 43 Bacillus_phage(35.0%) portal,capsid,tail,terminase,integrase attL 542229:542243|attR 573045:573059
DBSCAN-SWA_2 939413 : 951139 11 Mollivirus(25.0%) NA NA
DBSCAN-SWA_3 1393973 : 1415790 22 Bacillus_phage(43.75%) tail,plate,portal,holin NA
DBSCAN-SWA_4 1947156 : 1956561 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_5 3127646 : 3135446 8 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_6 3355025 : 3362964 9 Paenibacillus_phage(66.67%) NA NA
DBSCAN-SWA_7 3395232 : 3408826 24 Paenibacillus_phage(37.5%) integrase attL 3399577:3399590|attR 3410176:3410189
DBSCAN-SWA_8 3609067 : 3616354 9 Staphylococcus_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage