CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018815	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0002 plasmid tig00000003, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP018814	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0002 chromosome, complete genome	3 crisprs	DinG,DEDDh,cas3,csa3,WYL	0	1	7	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

21082 : 110831

104

Escherichia_phage(17.78%)

transposase,integrase

attL 44663:44722|attR 93281:93297

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020314932.1\|21082_23083_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	3.3e-21	28.4
WP_020314938.1\|23151_23400_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_020314935.1\|23449_24007_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.8e-49	72.4
WP_072223070.1\|24037_24127_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_022644875.1\|24807_25128_-	hypothetical protein	NA	NA	NA	NA
WP_022644876.1\|25152_25416_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.4e-12	50.0
WP_001568047.1\|25603_25795_-	hypothetical protein	NA	NA	NA	NA
WP_013214014.1\|25837_26344_-	antirestriction protein	G9FHQ1	Rhodococcus_virus	1.2e-07	31.4
WP_073558255.1\|26386_27052_-	antirestriction protein	A9J566	Pseudomonas_phage	2.0e-10	31.9
WP_032408983.1\|27066_27423_-	hypothetical protein	NA	NA	NA	NA
WP_022644878.1\|27495_28263_-	hypothetical protein	NA	NA	NA	NA
WP_022644879.1\|28316_28736_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001568042.1\|28745_28967_-	hypothetical protein	NA	NA	NA	NA
WP_004152355.1\|28966_29668_-	DNA methylase	A0A2I7RE86	Vibrio_phage	7.1e-27	36.7
WP_072216848.1\|29869_29986_-	hypothetical protein	NA	NA	NA	NA
WP_001568040.1\|30104_30335_-	hypothetical protein	NA	NA	NA	NA
WP_022644880.1\|30396_31068_-	plasmid stability mediator StbB	NA	NA	NA	NA
WP_001568038.1\|31070_32042_-	hypothetical protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
WP_020805749.1\|32274_32706_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.6e-29	53.3
WP_022644881.1\|32705_33977_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	1.6e-149	63.5
WP_022644882.1\|34058_35033_-	ParB/RepB/Spo0J family partition protein	A0A1B0V750	Salmonella_phage	9.4e-86	55.0
WP_015632469.1\|35032_36238_-	ParA family protein	A0A077SL49	Escherichia_phage	4.0e-163	69.6
WP_007372134.1\|37019_37424_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.6e-68	97.8
WP_000612626.1\|37420_37768_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_022644883.1\|37816_39355_+\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.6e-281	94.7
WP_012539983.1\|39442_40198_-	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	1.7e-135	95.2
WP_032072094.1\|40828_40942_+	hypothetical protein	NA	NA	NA	NA
WP_032408936.1\|41070_41328_+	hypothetical protein	NA	NA	NA	NA
WP_022644886.1\|41385_42171_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.9e-52	92.0
WP_022644887.1\|42173_42812_-	hypothetical protein	NA	NA	NA	NA
WP_032072060.1\|42860_43181_-	hypothetical protein	NA	NA	NA	NA
WP_001261282.1\|43725_43956_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001044770.1\|43952_44369_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001348075.1\|44442_44679_+	AAA family ATPase	NA	NA	NA	NA
44663:44722	attL	NA	NA	NA	NA
WP_001067855.1\|44725_45430_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
44663:44722	attL	NA	NA	NA	NA
WP_022644888.1\|45320_46250_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.5e-45	40.1
WP_004201280.1\|46405_46879_+	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_001144737.1\|47099_47366_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_001389365.1\|47508_48273_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_004098817.1\|48533_49748_+	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_072094655.1\|49781_51185_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.0e-106	50.6
WP_001749967.1\|51596_51803_-	hypothetical protein	NA	NA	NA	NA
WP_064577928.1\|51807_52296_-	restriction endonuclease	NA	NA	NA	NA
WP_001452736.1\|52504_52816_-	hypothetical protein	NA	NA	NA	NA
WP_025404032.1\|52851_53157_-	IncN plasmid KikA protein	NA	NA	NA	NA
WP_001067855.1\|53192_53897_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
53130:53786	attR	NA	NA	NA	NA
WP_000427619.1\|55793_56798_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
53130:53786	attR	NA	NA	NA	NA
WP_000954592.1\|56979_57156_-	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_001043260.1\|57485_58301_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_001082319.1\|58361_59165_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_000480968.1\|59164_60001_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001120891.1\|59972_60512_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000027057.1\|60721_61582_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_000722315.1\|62281_63106_-	oxacillin-hydrolyzing class D beta-lactamase OXA-9	NA	NA	NA	NA
WP_001206315.1\|63165_63954_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_014454105.1\|64023_64578_-	aminoglycoside N-acetyltransferase AAC(6')-Ib'	NA	NA	NA	NA
WP_001217881.1\|64811_65369_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_004152391.1\|66483_68199_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004152392.1\|68308_71338_+\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004199214.1\|71444_72470_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152394.1\|72466_73246_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004152396.1\|73564_74446_+	carbapenem-hydrolyzing class A beta-lactamase KPC-3	A0A1B0VBP7	Salmonella_phage	2.8e-73	52.2
WP_004152397.1\|74695_76015_-\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_004196359.1\|76926_77298_+	hypothetical protein	NA	NA	NA	NA
WP_004196315.1\|77360_78281_+	hypothetical protein	NA	NA	NA	NA
WP_004196325.1\|78334_79093_+	hypothetical protein	NA	NA	NA	NA
WP_004196314.1\|79326_80625_+	MFS transporter	NA	NA	NA	NA
WP_004196355.1\|80730_81000_+	nickel-sensing transcriptional repressor NcrB	NA	NA	NA	NA
WP_004196366.1\|81012_82143_+	Ni(II)/Co(II) efflux transporter permease subunit NcrC	NA	NA	NA	NA
WP_032072095.1\|82304_82727_+	nickel resistance OB fold protein NcrY	NA	NA	NA	NA
WP_004196353.1\|82982_84323_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_015065592.1\|84411_85944_+\|transposase	IS3-like element ISKpn38 family transposase	A0A1B1P773	Bacillus_phage	3.1e-51	39.8
WP_162859354.1\|86377_88660_-	S8 family peptidase	NA	NA	NA	NA
WP_022644891.1\|88865_89906_-	ATP-binding protein	M4QMW8	Micromonas_pusilla_virus	9.5e-20	35.2
WP_087439983.1\|90075_91451_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.4e-79	74.1
WP_015632484.1\|91639_91966_-	hypothetical protein	NA	NA	NA	NA
WP_022644893.1\|91962_92691_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_015632482.1\|92687_93119_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_022644894.1\|93163_95164_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	3.2e-24	26.5
WP_022644895.1\|95232_95481_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_022644896.1\|95529_96072_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.7e-49	74.4
WP_022644897.1\|96746_97067_-	hypothetical protein	NA	NA	NA	NA
WP_025404029.1\|97102_97357_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.6e-11	50.7
WP_022644899.1\|97550_97742_-	hypothetical protein	NA	NA	NA	NA
WP_022644900.1\|97784_98291_-	antirestriction protein	G9FHQ1	Rhodococcus_virus	6.9e-08	31.9
WP_032072057.1\|98335_99001_-	antirestriction protein	NA	NA	NA	NA
WP_032072058.1\|99444_100212_-	hypothetical protein	NA	NA	NA	NA
WP_022644903.1\|100265_100685_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_022644904.1\|100694_100916_-	hypothetical protein	NA	NA	NA	NA
WP_004152355.1\|100915_101617_-	DNA methylase	A0A2I7RE86	Vibrio_phage	7.1e-27	36.7
WP_022644905.1\|102002_102338_-	hypothetical protein	NA	NA	NA	NA
WP_004194746.1\|102334_102568_-	hypothetical protein	NA	NA	NA	NA
WP_022644906.1\|102602_103535_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_072216862.1\|103736_103862_-	hypothetical protein	NA	NA	NA	NA
WP_022644907.1\|103970_104201_-	hypothetical protein	NA	NA	NA	NA
WP_022644908.1\|104404_104650_+	DinI-like family protein	Q7Y3V9	Yersinia_phage	1.5e-08	39.3
WP_044596206.1\|104646_105096_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	5.2e-31	52.0
WP_022644910.1\|105107_106379_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	7.3e-147	60.5
WP_022644911.1\|106480_106681_+	hypothetical protein	NA	NA	NA	NA
WP_032072061.1\|106881_107157_-	hypothetical protein	NA	NA	NA	NA
WP_022644912.1\|107147_107795_-	P-loop NTPase	A0A222YXS3	Escherichia_phage	9.7e-39	43.5
WP_022644913.1\|108124_108643_-	hypothetical protein	NA	NA	NA	NA
WP_022644914.1\|109182_109770_+	recombinase family protein	A0A219Y912	Aeromonas_phage	2.6e-22	36.5
WP_022644915.1\|109877_110831_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.4e-62	49.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP018814

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018814_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018814_1

43979-44076

Orphan

Consensus_repeat	Method
GTAGTGCAGGAGATTCACTAGGGGGTAGTGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018814_1

>merge|NZ_CP018814|1|43979-44076|CRISPRCasFinder
GTAGTGCAGGAGATTCACTAGGGGGTAGTGCAAATCGTTCACTACCTGGTGCAGCAGATTCACCCCGTAGTGCAGGAGATTCACTAGGGGGTAGTGCA

>NZ_CP018814|1|1|43979-44076|CRISPRCasFinder
GTAGTGCAGGAGATTCACTAGGGGGTAGTGCA	AATCGTTCACTACCTGGTGCAGCAGATTCACCCC
GTAGTGCAGGAGATTCACTAGGGGGTAGTGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018814.1\|WP_071886186.1\|49899_50169_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP018814.1\|WP_023296234.1\|40912_41320_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032610629.1\|38595_39768_-\|DUF3596-domain-containing-protein	unknown	unknown	gnl\|CDD\|271189
NZ_CP018814.1\|WP_071886177.1\|52644_53235_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032610617.1\|46826_47609_+\|antitermination-protein	unknown	unknown	gnl\|CDD\|367572
NZ_CP018814.1\|WP_017384386.1\|48984_49263_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|368449
NZ_CP018814.1\|WP_023296237.1\|42576_43269_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP018814.1\|WP_032610613.1\|49262_49892_+\|glycoside-hydrolase-family-19-protein	unknown	unknown	gnl\|CDD\|225720
NZ_CP018814.1\|WP_032610625.1\|41312_41534_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032610626.1\|40309_40723_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032610608.1\|50418_51117_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032610623.1\|42111_42405_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032610607.1\|51205_52663_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|224137
NZ_CP018814.1\|WP_017384387.1\|48605_48995_+\|membrane-protein	unknown	unknown	gnl\|CDD\|374892
NZ_CP018814.1\|WP_032610627.1\|39921_40206_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032610621.1\|44541_45423_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181180
NZ_CP018814.1\|WP_032610624.1\|41640_42030_-\|S24-family-peptidase	unknown	unknown	gnl\|CDD\|119397
NZ_CP018814.1\|WP_048859479.1\|43422_43638_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP018814.1\|WP_000050710.1\|39722_39932_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032610619.1\|45419_46799_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273206

Protein	Function_ID	Function_description	E-value
NZ_CP018814.1\|WP_071886186.1\|49899_50169_+\|hypothetical-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	0.00570507
NZ_CP018814.1\|WP_032610629.1\|38595_39768_-\|DUF3596-domain-containing-protein	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	8.17965e-31
NZ_CP018814.1\|WP_032610617.1\|46826_47609_+\|antitermination-protein	gnl\|CDD\|367572	pfam03589, Antiterm, Antitermination protein.	4.50523e-27
NZ_CP018814.1\|WP_023296237.1\|42576_43269_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	1.88177e-29
NZ_CP018814.1\|WP_032610621.1\|44541_45423_+\|ATP-binding-protein	gnl\|CDD\|181180	PRK07952, PRK07952, DNA replication protein DnaC; Validated.	2.03544e-35
NZ_CP018814.1\|WP_017384386.1\|48984_49263_+\|phage-holin-family-protein	gnl\|CDD\|368449	pfam05449, Phage_holin_3_7, Putative 3TM holin, Phage_holin_3. This is a family of putative proteobacterial phage three-transmembrane-domain holins.	8.0904e-19
NZ_CP018814.1\|WP_032610607.1\|51205_52663_+\|glycosyl-transferase	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	2.01178e-09
NZ_CP018814.1\|WP_017384387.1\|48605_48995_+\|membrane-protein	gnl\|CDD\|374892	pfam16931, Phage_holin_8, Putative phage holin.	1.91362e-33
NZ_CP018814.1\|WP_032610613.1\|49262_49892_+\|glycoside-hydrolase-family-19-protein	gnl\|CDD\|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	1.88693e-68
NZ_CP018814.1\|WP_032610624.1\|41640_42030_-\|S24-family-peptidase	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	2.49372e-10
NZ_CP018814.1\|WP_048859479.1\|43422_43638_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	9.71981e-20
NZ_CP018814.1\|WP_032610619.1\|45419_46799_+\|AAA-family-ATPase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	1.03394e-105

>NZ_CP018814.1|WP_048859479.1|43422_43638_+|helix-turn-helix-domain-containing-protein
MAKAVYVAGGQSSLAKKVGVTQGAVWKWVRGIKKVSPVHAVAVSNAVNGVVKPHELRPDLPTLFPHPGNEV
>NZ_CP018814.1|WP_023296237.1|42576_43269_-|helix-turn-helix-transcriptional-regulator
MNTLAERLRLAMAHAGATQSQLAHRVGVSQGAIQKLTSGKAQSSGKIVDIAKALDVDPIWLSTGEGTMGPAKTPEQRMFGIDPWDKQTPLEDDEVEVPYLKDIEFACGDGSALNDDYNGKKLRFSKATLRKVGANSDGDGVLCFAAHGNSMEPVIADGSTVAINCHDKRIVDGKIYGINQGGWKRLKILYRSGPDKVTIRSYNSDEYPDEEVDMDSLEVLGRLFWVSTIF
>NZ_CP018814.1|WP_032610623.1|42111_42405_-|hypothetical-protein
MNTTSQPNPASQAFDIHAKLKAANSHWIYLRAAQPHQNDFDYEFNTTFIDGLEFAIYERVDNYFVLVDFFKSYEEACDDAKKIIDDHPDIKKMFSVS
>NZ_CP018814.1|WP_032610624.1|41640_42030_-|S24-family-peptidase
MHNLLNPINKPVAYPRELFVDEKGKYTPGEIMTCQMGGDSMQPTIQPCELIAFADCGGKVSEPGIYVFTRDVFGRPCVFVKRVEPMPDGSLVIISDNHHYETFTLDVDEQSDMQVHGRVIASMTMRRFV
>NZ_CP018814.1|WP_032610625.1|41312_41534_-|hypothetical-protein
MGVLKRQDIQEVNIKAEKLSGLTQTLFECHDKLDRFQLKTICALVYDLAAEIHGWTEKEEEIVMGLEEEKRNG
>NZ_CP018814.1|WP_023296234.1|40912_41320_-|hypothetical-protein
MDKLIETYRRRILKAALLRHQRKTGSNCLVIKLNKGGINTVELTEILLDGLLRKFERLAISEYGNVEGVKAIKGIYSSAVDVNGSGEFLTDSGKELIDELISELVEFVKKQKVEAPKTEGHEMGGSDGTYSDTNS
>NZ_CP018814.1|WP_032610626.1|40309_40723_-|hypothetical-protein
MNDKRTVSMIDLALQKHDTPVGPLFVAVRHGRIKKCFTQDTAIRYLAFFMTTEAFERSGFPQRHPRVRIDRDDREVWRDGETKAEYLAAHQRCVRRLRRILACKREMEKWCEKWDAMHDRFVKEVDALQAIKPVGVK
>NZ_CP018814.1|WP_032610627.1|39921_40206_-|hypothetical-protein
MNKPVSEIIKRWTRLATEAKQLGHTTIPVDPENMLMVVGDLPDSEDYQAAIDFLRKRAASELDGGFRAHHNALIYAANELENAQAFGREVGHES
>NZ_CP018814.1|WP_000050710.1|39722_39932_-|hypothetical-protein
MSLDCVPLSTYCRDAGETVEAVNKRIQRGLWKEGVHVLKVDGVKERWIDLTEVSKWARKNKDHYLSQEE
>NZ_CP018814.1|WP_032610629.1|38595_39768_-|DUF3596-domain-containing-protein
MGKKEQGSLSLPRGVTIRQHKTGDTLVITFTYKGVLCREPLSRMEANARGVKYAERLLGEIQNQIAGGTFDYAKYFPTSKKLELFGVVKKTKNIKSYLDEYLKICQNRNLSPSTINGYEKCLSALSALHKLHVSELTPAVLKNWIASRKTKLKTTRNNLSFLRSAIDEAVTDGLLTINPVTLVSASRYHVIDSSPSADDYEVDPFTPAETLAIYQSCRYPEWENLFRFAFNTGLRSSELCALRWLDLDTIANTAHVQAASVVGVLKGTKTKAGTRKVELNSEALAALQAQKQYTFMKSEFIFSDPKTGEPWANADAIRKKAWVPTLKKAGVRYRNPYQTRHTFATKHISQGVNLFWLAGQMGHKGPEMIFRNYGKYLAEYDGKTAISAAL
>NZ_CP018814.1|WP_032610621.1|44541_45423_+|ATP-binding-protein
MLSIKQREEREALVAKREGLREELAFAVEHKKPWQWGSWESGEVHAAACEKHGGYQRISLTGKAYRGVENVKHSQCPECVKEELAGIESNLHALRVADLLDNAGIARRFETCEFDNYQAINQDAAKNLSSCRRYASSWPERLNAGTGLVMTGNCGTGKNHLAVSMAKSIIRDHLANVEITDVMRLTRSVKSTWRHNAEMTEEDVIERFASLDLLIIDEVGVQFGSPTEMTILQEIINARYESILPTILISNLTFDQLKETIGERIVDRVTDGGRNRLAFGWGSFRAIASGVVA
>NZ_CP018814.1|WP_032610619.1|45419_46799_+|AAA-family-ATPase
MTPVWKNEDLEGAVIGAIFLRGADPEVLDILSRVPATAFSVPQYREIYTGICRQARGAGVIDPVLLCENMPKHSAIIMDSSRIAWAKSALVSYVATLERNAAVRDAEAVIERALADLRSAHNGDAALSAFRAAQNSIAAISLEEKTVQPVHIDDILPAVVDRVDARNRGLEEARSLMTGIEELDAKTGGIEPTDLVFIAARPSMGKTELALDIIDKVSEQGRGVLFFSMEMPNIQIGERMVSAAGGMSVSRLKRAADFDDEDWARLTDGVGRLTGRSIWMVDSTDLTVDQIQQISTRLQMAHPEIALVVVDYLALIKIESTARYDLAVGEVSKGLKRLAKSNKTPVLALSQLSRGVESRPNKRPMNSDLKNSGEIEADADLIMMLYRDEVYNPKSPAKGIAEINVTKQRNGELGTIYRRFYNGHFLPIDQELAKQRSAPQQKAHTRRYSKERHSSNADY
>NZ_CP018814.1|WP_032610617.1|46826_47609_+|antitermination-protein
MKLEASLKHFSPQGMNISDDVKGTSPDRLTGTDVMAAIGTTSSRARFGLAAFFGKAGISKTDEQLAVQALARYAMDVAPKNVRKAAGGQFGWCMQMLAQFAFADYSRSAATSVTCHSCSGTGFISGNEDVVKHPGIFDADGAEVVAPKIKNELVKRVCETCGGKKVILARCRCGGKGEVLDRKATKERGAPVFKTCERCSGNGFSAISSATVHRAILKRLPDLHQSSWSRNWKPFYEMLVDTLRQWERHAAVEFEKATTY
>NZ_CP018814.1|WP_017384387.1|48605_48995_+|membrane-protein
MSDPLTGTGAVLGGGLLGSVLYGVFTHTDFGVVFGAFGGAVFYVATATNLSRARLAAYFLTSFIVGVLGAGLIGSLLNAASHYEKPLDALGAVILSALCIKILTYLNNQDLNNVFKFFSRLRGGGGNGN
>NZ_CP018814.1|WP_017384386.1|48984_49263_+|phage-holin-family-protein
MVIDPSAVFNAFICAAIVIVLMFYQRHGARHRPFISVLAYITVLVYAAIPLQFIFGLYRDSSWLVVVANILIFAAILKVRGNMARLVDRLRH
>NZ_CP018814.1|WP_032610613.1|49262_49892_+|glycoside-hydrolase-family-19-protein
MNQTQFQRAAGISAGLAARWFPHIDAAMKEYGITAPLDQAMFIAQMGHESTRFTRLVESLNYAVENLVPTFGSHRITQQQAAALGRTATQPANQKAIANLVYGGEWGKEHLGNQVAGDGWKYRGRGLKQVTGLSNYRSCGHALKLDLVTHPDLLEQDEYAARSAAWFYSSRGCLLHSGDVERVTLLINGGRNGLDKRRALFNLAKSVLV
>NZ_CP018814.1|WP_071886186.1|49899_50169_+|hypothetical-protein
MGIETIIGLVALVISAIAGAFGMGHIRGTSKAEAKADQQRTEDNAAATVTAAERRVEATKEASNVQQTVNHMPGDDVDRELRTNWTRKG
>NZ_CP018814.1|WP_032610608.1|50418_51117_-|hypothetical-protein
MSREGSLDLLQEVEENLDIMKQTQNIKSVKVKAILENLRSSLEYLANDTYDKYNDASPADKRPNIYFPYGKKTFVDNFFIKILKVNPPNSSPLYKVFTSIQDYHTGEKWLEMMCNLTNEVKHRQPIPLREDNSVKDLSISVDGFGLIKAGSNANILLQNNYVNGQKLEDFTFKNGNLQRSGNGIPLNIVITEEKKIRFHGNDYEVIPFIELCLSKIRPLIIEAYDELDNISI
>NZ_CP018814.1|WP_032610607.1|51205_52663_+|glycosyl-transferase
MQVTIDGVPYAPACAIASRIGIAITTHNRADVLKRAIEQHQKHLPAGALVVVVVDGSKPTAVVPDGVQLLRHETSLGIVASKNASLTALMDAGCEHLFLWDDDAWPIADNWHLPYIESPEPHLAYQFLDLAGTNKLNDMSVLYRDDKHIAYTGQRGVMLYYHRSAIEKVGGFDPVYGRGMYEHSDLALRIHNAGLTTWAYADVLGSDKLIHSLDEHEAVERSVPRPDRQALVERNVKIHNERRDTGFTGYVEYRQQRDVVITTLLTSQPDPQRGTKMAASPDMLSKWAASLRQCGRIALVDELLTAPADVELYLVPDVKMNVYFRRWLHIWQHLREHPEYRFVWCTDGTDVEMLRAPWEEMEAGKVYVGSEPKTYADNWAKQNHPERIYQEFIEAHRNDVMLNAGLLGGTRADVMAFAHSIIRLYYRIESYRFWKKEQAGAAVGDMLAFGIVAKSFGDRIVTGPRIHTVFKSEGVGKEYAFWKHK
>NZ_CP018814.1|WP_071886177.1|52644_53235_+|hypothetical-protein
MLETQVKFVVVGHHSRIDPAHRLATMLDAHLLIDYSNHGANWNHRRALEWAAEQTCRVVVLEDDALPVHRFTEMVTDWLARCPDDLLSFYLGTGRPPQYQMQIAERLIIADKARYEFISFPRLIHGVCYSVPPHCISRVLSRWDSNKPADFAVGDAWGGSVVYPCYSLVDHADGEPVESHPDSAPRTERRRAWRLA

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Crispr_ID: NZ_CP018814_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018814_2

2250305-2250419

Orphan

Consensus_repeat	Method
CCCTCTCCCTGTGGGAGAGGGCCGGGTTGAGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018814_2

>merge|NZ_CP018814|2|2250305-2250419|CRISPRCasFinder
CCCTCTCCCTGTGGGAGAGGGCCGGGTTGAGGGCGAGGTAAAAGCAAAACGGCAACCCCGTTGCCGTTTTTAGTGTTTGCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGC

>NZ_CP018814|2|2|2250305-2250419|CRISPRCasFinder
CCCTCTCCCTGTGGGAGAGGGCCGGGTTGAGGGC	GAGGTAAAAGCAAAACGGCAACCCCGTTGCCGTTTTTAGTGTTTGCT
CCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018814.1\|WP_032608817.1\|2246700_2247900_-\|enterochelin-esterase	unknown	unknown	gnl\|CDD\|236695
NZ_CP018814.1\|WP_022650555.1\|2258261_2259734_+\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NZ_CP018814.1\|WP_003858806.1\|2246477_2246690_-\|MbtH-family-NRPS-accessory-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP018814.1\|WP_022647369.1\|2251909_2252758_-\|iron/manganese-ABC-transporter-permease-subunit-SitC	unknown	unknown	gnl\|CDD\|334323
NZ_CP018814.1\|WP_032608820.1\|2239744_2240749_+\|Fe(3+)-siderophore-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182464
NZ_CP018814.1\|WP_003858815.1\|2251073_2251913_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_CP018814.1\|WP_003858827.1\|2257660_2258248_+\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NZ_CP018814.1\|WP_032608815.1\|2248046_2250287_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|237410
NZ_CP018814.1\|WP_032608819.1\|2241734_2242535_+\|iron-enterobactin-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182336
NZ_CP018814.1\|WP_026080545.1\|2240748_2241738_+\|iron-enterobactin-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182463
NZ_CP018814.1\|WP_032610190.1\|2254973_2255360_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368831
NZ_CP018814.1\|WP_032608822.1\|2237382_2238342_+\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236806
NZ_CP018814.1\|WP_032608824.1\|2236018_2237194_-\|isochorismate-synthase-EntC	unknown	unknown	gnl\|CDD\|184977
NZ_CP018814.1\|WP_032608821.1\|2238388_2239636_-\|enterobactin-transporter-EntS	unknown	unknown	gnl\|CDD\|236700
NZ_CP018814.1\|WP_022650559.1\|2252754_2253561_-\|iron/manganese-ABC-transporter-ATP-binding-protein-SitB	unknown	unknown	gnl\|CDD\|185016
NZ_CP018814.1\|WP_032608809.1\|2254686_2254971_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225495
NZ_CP018814.1\|WP_032608807.1\|2255498_2257532_-\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NZ_CP018814.1\|WP_032608811.1\|2253563_2254475_-\|iron/manganese-ABC-transporter-substrate-binding-protein-SitA	unknown	unknown	gnl\|CDD\|238557
NZ_CP018814.1\|WP_032608818.1\|2242623_2246481_-\|enterobactin-non-ribosomal-peptide-synthetase-EntF	unknown	unknown	gnl\|CDD\|236668
NZ_CP018814.1\|WP_032608813.1\|2250448_2251138_+\|enterobactin-synthase-subunit-EntD	unknown	unknown	gnl\|CDD\|182334

Protein	Function_ID	Function_description	E-value
NZ_CP018814.1\|WP_032608817.1\|2246700_2247900_-\|enterochelin-esterase	gnl\|CDD\|236695	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional.	0
NZ_CP018814.1\|WP_022650555.1\|2258261_2259734_+\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NZ_CP018814.1\|WP_003858806.1\|2246477_2246690_-\|MbtH-family-NRPS-accessory-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	6.57585e-27
NZ_CP018814.1\|WP_022647369.1\|2251909_2252758_-\|iron/manganese-ABC-transporter-permease-subunit-SitC	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	6.83391e-81
NZ_CP018814.1\|WP_032608820.1\|2239744_2240749_+\|Fe(3+)-siderophore-ABC-transporter-permease	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	1.36742e-175
NZ_CP018814.1\|WP_003858815.1\|2251073_2251913_-\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	2.24762e-72
NZ_CP018814.1\|WP_003858827.1\|2257660_2258248_+\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	3.33362e-117
NZ_CP018814.1\|WP_032608815.1\|2248046_2250287_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|237410	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor.	0
NZ_CP018814.1\|WP_032608819.1\|2241734_2242535_+\|iron-enterobactin-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182336	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein.	0
NZ_CP018814.1\|WP_026080545.1\|2240748_2241738_+\|iron-enterobactin-ABC-transporter-permease	gnl\|CDD\|182463	PRK10440, PRK10440, iron-enterobactin ABC transporter permease.	0
NZ_CP018814.1\|WP_032610190.1\|2254973_2255360_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368831	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system. RelE is a family of Gram-negative bacterial antitoxins of the RelE/RelB toxin-antitoxin system. Its cognate antitoxin is family RelB, pfam04221.	4.31615e-06
NZ_CP018814.1\|WP_032608822.1\|2237382_2238342_+\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236806	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional.	0
NZ_CP018814.1\|WP_032608824.1\|2236018_2237194_-\|isochorismate-synthase-EntC	gnl\|CDD\|184977	PRK15016, PRK15016, isochorismate synthase EntC; Provisional.	0
NZ_CP018814.1\|WP_032608821.1\|2238388_2239636_-\|enterobactin-transporter-EntS	gnl\|CDD\|236700	PRK10489, PRK10489, enterobactin transporter EntS.	0
NZ_CP018814.1\|WP_022650559.1\|2252754_2253561_-\|iron/manganese-ABC-transporter-ATP-binding-protein-SitB	gnl\|CDD\|185016	PRK15056, PRK15056, manganese/iron ABC transporter ATP-binding protein.	0
NZ_CP018814.1\|WP_032608809.1\|2254686_2254971_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	3.67146e-14
NZ_CP018814.1\|WP_032608807.1\|2255498_2257532_-\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP018814.1\|WP_032608811.1\|2253563_2254475_-\|iron/manganese-ABC-transporter-substrate-binding-protein-SitA	gnl\|CDD\|238557	cd01137, PsaA, Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	4.17063e-149
NZ_CP018814.1\|WP_032608818.1\|2242623_2246481_-\|enterobactin-non-ribosomal-peptide-synthetase-EntF	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0
NZ_CP018814.1\|WP_032608813.1\|2250448_2251138_+\|enterobactin-synthase-subunit-EntD	gnl\|CDD\|182334	PRK10251, PRK10251, enterobactin synthase subunit EntD.	3.02128e-70

>NZ_CP018814.1|WP_032608815.1|2248046_2250287_+|TonB-dependent-siderophore-receptor
MNKKIHSLALLVNLGIYGVALPAMADDNTASAQHEDTMVITAAEQNLQAPGVSTITADEIRKNPPARDVAEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSIRLGWRGERDTRGDTGWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKKFDDQWHGSWNTYLNAPEHKDEGSTKRTNFSLSGPLGGDFSFRMYGNLDKTQADAWDINQGHQSDRTGAYANTLPAGREGVENKDINGVVRWDFAPMQSLEFEAGYSRQNNLYAGDTQNTNNDNALVKKNYGKETNRIYRQNFAVTWNGGWDNGITTSNWAQYEHTRNSRLGEGLAGGLEGLFNSNKFTDTDLADVMLHSEINLPIDFIVNQNLTLGTEWNQQRMKDSTSFTQTQQGGPIPGMSEDRSPYTSAEIFSLFAENNMELTDSTMLTPALRFDHHTIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYLLYSKGQGCYASSDGVGCYMMGNDDLKAETSINKEIGLEWKRDGWLAGVTWFRNDYRNKIEAGYAPIGQTSTGKVTTDIYQWENVPKAVVEGLEGSLNVPVSDTINWTNNITYMLQSKNKETGDRLSIIPEYTLNSNLSWQVRQDVSLQSTFTWYGKQQPKKYNYKGQPVTGSEKDEVSPYSIVGLSATWDVTKNVSLTGGVDNVFDKRQWRAGNAQTTGNTTTGAYMYGAGAYTYNEPGRTWYMSVNTRF
>NZ_CP018814.1|WP_032608817.1|2246700_2247900_-|enterochelin-esterase
MTVLTTGSEAWWQAKNGPERERHQENYRVTFWWRDPAGTQKTSTVKRVWLYVTGVTDHHQNARPQSLERVPDTDVWQWQGEFSPEWRGSYCFIPSDNENDFADAVFEGEQPDRMALREGWRKLLPHAVSDPLNPQSWRGGRGHAVSALEMPEAPVQPGWNHPDTPYNKPVCIDWHSARLKNRRRVWIFTTGDESPERPLAVLLDGQFWAESMPVWPALASLTHEGKLPPAVYVLIDVIDTAHRSRELPCNPDFWLAVQEELLPQVKSMAPFSDRADHTVVAGQSFGGLSSLYAGLNWPQRFGCILSQSGSYWWPHRGAQQDGLLIEQLKAGEKTARGLRIVLEAGRNEPLILRANQAIFAELHTQQPVFWRQVDGGHDALCWRGGLTQGLMTLWQPLIQ
>NZ_CP018814.1|WP_003858806.1|2246477_2246690_-|MbtH-family-NRPS-accessory-protein
MEFSNPFDNPQGQFAILQNDQGQYSLWPQQCELPAGWRVVCEPQSQEACQQWLAEQWQTLEPFYFAGERA
>NZ_CP018814.1|WP_032608818.1|2242623_2246481_-|enterobactin-non-ribosomal-peptide-synthetase-EntF
MNRLPLVAAQPGIWMAEQLSSLPNAWSVAHYTELKGAIDAPLLAKAIAEGMMQADTLRMRFAEDNGEVWQWIDEAMLLPEPSIVRVDSHDAAVALMEADLNQNLRVDSGLPLAFHQLIQVGESHWYWYQRYHHLVVDGFSFPAITRQIAAIYAAWQKGEPAPASPFTPFAEVVEEYQRYRDSEAYQRDGAFWAEQRQQLPSPVSLSSAPLPGHAATTDILRLKMAMDGRAFSQLAQMAGQAQRTDLALALVVLWLGRLTGRLDYAAGFIFMRRMGSAALTATGPVLNVLPLAVNIRPHESLPELALRLANQLKKMRRHQRYDAEQIVRDSGRAAGDEALFGPVLNVKVFDYQLDIDGVEAITHTLATGPVNDLELALFPDEQGGLSIEILANGQRYDEATLKGHAVRLNAMLTQFAANPDLRCGDVETVSEQEYARLARINDTGLALPSTTLADLVAEQASKTPDAPALADAHTELNYRQMREQVVALANLLRARGVKPGDSVAVALPRSVFLTLALHGIVEAGAAWLPLDTGYPDDRLRMMLEDAKPSLLITTDEQLPRFSDLSVETFSYNTLLPTSGAEPLRLAKPEQTAYIIFTSGSTGRPKGVMVGHTAIVNRLKWMQDHYPLTAHDVVAQKTPCSFDVSVWEFWWPFIAGAKLVMAEPDAHRDPQAMQSFFAEYGVTTTHFVPSMLAAFVASLTPENAHCCRTLKQVFCSGEALPTALCREWEQLTHAPLHNLYGPTEAAVDVSWYPAYGPELAAVEGNSVPIGFPVWNTGLRILDAMMRPVPFGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRAMLALPDVAQAVAHACVFNQAAATGGDARQLVGYVVSESGLPLDRDALLASLKAQLPPHMVPVVLLQISALPLSANGKLDRKALPLPELTSRTSGRAPETQTEVAVAQAFSSLLGCAVNDIEADFFALGGHSLLAMRLAAQLSRAFSRKVTPGQIMVASTVSKLSALLDSQMSDEQAQRLGYETLLPLRESNGPTLFCFHPASGFAWQFSVLARYLSPRWSIVGIQSPRPNGPMQQCADLDGVIEHHLNTLRKQQPQGPYYLFGYSLGGTLAQGIAARLREQGEAVAFLGLLDTWPPETQNWAEKEANGLDPAVLAEIERERQAFIAAQQGQGSSELFNAIEGNYADAVRLLTTAHSARFDGKATLFVAERTRTQDPQAAWAPWVGELEVYSQDCAHVDIISPQAFEKIGPVLKEILG
>NZ_CP018814.1|WP_032608819.1|2241734_2242535_+|iron-enterobactin-ABC-transporter-ATP-binding-protein
MTDSTTRLRGENLTLGYGKKIIARDLSVAIPDGHFTAIIGPNGCGKSTLLRTLSRLMSPVEGSVFLDGEQIQRFASKEVARRIGLLAQNATTPGDITVQELVSRGRYPHQPLFTRWRKEDDEAVKRAMQATGITELAQQSVDTLSGGQRQRAWIAMVLAQETSIMLLDEPTTWLDISHQIDLLELLSELNRTQGYTLAAVLHDLNQACRYATHLIALRDGEIVAQGAPKEIVTPELIARIYGMRCMIIDDPVAGTPLVVPLGKRAV
>NZ_CP018814.1|WP_026080545.1|2240748_2241738_+|iron-enterobactin-ABC-transporter-permease
MAPSRRLLTSVALLVVASLLLAVWSLQSGAVTLDFAQVFHALTGSAPRNITMVVTEWRLPRVAMAILVGAALGVSGAIFQSLMRNPLGSPDVMGLNTGAWSGVLVAMVLFGQHLTAITFTAMAGGILTSLLIWALAWRNGIDTFRLIIIGIGIRAMLMAFNTWLLLQASLETALSAGLWYAGSLNGLTWGKTWPAAPLIILMFIGALLLVRRMRLLEMGDDSACALGVSVERSRLMLMLVAVLLTAASTAIAGPISFIALVAPHIARRLSGTARWGLTQAALCGAVLLLAADLCAQRLFTPYQLPVGVVTVSLGGIYLIVLLVQESRKK
>NZ_CP018814.1|WP_032608820.1|2239744_2240749_+|Fe(3+)-siderophore-ABC-transporter-permease
MSFSSSAVRAIAVPVLLLLLILAIALSLLVGAKPLPASVIVDAISGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGILGVNSGASFAIVLGAALFGFTSPSEQLVMAFCGALAASLVVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLSNGIALLNPDVYDQLRFWQAGSLDIRTLETLKVVVIPASVAAAVALCLSRALNSLSLGSDTATALGNRVARTQLTGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADVLGRLLVPGELRVSVVSAFIGAPVLIFLVRRRRGGSA
>NZ_CP018814.1|WP_032608821.1|2238388_2239636_-|enterobactin-transporter-EntS
MNQKSWLLNLSLLKTHPAYRAVFIARFISILSLGLLGVAVPVQIQTMTHSSWLVGLSVTLTGGAMFIGLMVGGVLADRYERKKLILLARGTCGVGFVGLCLNAMLPEPSLVAIYVLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMVGGLLLATGNVAWNYGLAAAGTFITTLTLLRLPLLPPPPQPREHPLKSLMAAIRFLFSNPLIGGIALLGGLLTMASAVRVLYPALAGEWQMSASEIGVLYAAIPLGAACGALTSGNLAQSARPGLIMLVATLASFIAIGFFSLMPVWALGVMCLVIFGWLSAVSSLLQYTLIQTQTPEGMLGRINGLWTAQNVTGDAIGAAILGGMGAIMTPVASASSSGFVLAMVGAILLVTLVELRRFRQEVALNDGAA
>NZ_CP018814.1|WP_032608822.1|2237382_2238342_+|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein
MKIAAVCRNALLLTGLFVLGLTSAAADDWPRQVSDSRGVHTLESKPTRIVSTSVTLTGSLLAIGAPVIASGATTPNNRVADAQGFLRQWGDIAKQRKVARLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSAIAPTLIINYDDKSWQELLTQLGTITGQETQAAERIAAFDKQLAQVKQQMKLPPQPVNAIVYTAAAHTANLWTTDSAQGKLLHQLGFTLADLPAGLQTSTSQGKRHDIIQLGGENLATGLNGEGLFVFAGDEKDVNAIYANPLLAHLPSVKNKRVWALGTETFRLDYYSAMLVLDRLNALFK
>NZ_CP018814.1|WP_032608824.1|2236018_2237194_-|isochorismate-synthase-EntC
MDTSLAEEVQHTATTLQADSFFFMSPYRSFTTSGCFARFSEPAVGGDDPAGPFQQKLAQAFRNAKNSGIAHPVMVGAIPFDTRKPSSLFIPQRWQTFSRPARQQSARYASGAQTLNVQQRTEIPPQPVFEEMVARAASLTATPQVNKVVLSRLIDIATDKQIDSSALMERLIAQNPASFNFHVPLEDGGVLLGASPELLLRKEGAHFSSLPLAGSARRQPDDVLDREAGTKLLASEKDRHEHDLVTQAMKTILEPRSHHLSMPASPQLITTPTLWHLATPVEGDARENENALTLACLLHPTPALSGFPHQAAKELIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCARLHQNTVRLFAGAGIVPASSPVGEWRETGVKLSTMLNVFGLH
>NZ_CP018814.1|WP_032608813.1|2250448_2251138_+|enterobactin-synthase-subunit-EntD
MHTTHSTFSLAGHTLHRITFDPTTFTDADLLWLPHHAQLANAGRKRKADHLAGRIAAAHALPDHTVPAIGPSGEPLWPQGISGSITHSGTQAIAVVTQYPALIGIDCETILSENEAREIKDGIIDTQEEPVLSRMGYPFALALTLVFSAKESLFKALFPQVQAWMGFDCARVTKLDDKTLTLALTRQLAGFEEGTAFPLHWQQHGEQVITLLSHAPGDEPSRWSPQTSR
>NZ_CP018814.1|WP_003858815.1|2251073_2251913_-|metal-ABC-transporter-permease
MMTLLLEPFQFAFMNNALLISLLVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWMMGLPLALGAFVAGLFCAVATGYLKDNSRIKQDTVMGIVFSGMFGAGLILYIAVKPEVHLDHILFGDMLGINGMDILQSGLVAGMIALVIGLKWRDFLLFCFDYQQAQASGLRTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAVAVLITRRFHMALLVAVAVSALVSVSGVYASFYLDSAPAPTIVVLFAMVFIVTFVVTSVKARRQERVTAE
>NZ_CP018814.1|WP_022647369.1|2251909_2252758_-|iron/manganese-ABC-transporter-permease-subunit-SitC
MNALLEPFGYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIAPEDIVQLAIIGVVSIVILLFKWKDLMVTFFDENHARAIGLRPERLKILFFTLLAVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVAIGSITSFLGAWASYYLDGATGGIIVVAQTLLFLLAFVFAPKHGLLASRRRAREAHP
>NZ_CP018814.1|WP_022650559.1|2252754_2253561_-|iron/manganese-ABC-transporter-ATP-binding-protein-SitB
MQKGIVVTDVTVTYRNGHTALRDASFSVPGGSIAALVGVNGSGKSTLFKAVMGFVRAASGTISILGLPPHRALRQNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGFLRRPKECDKQIVTDALKRVDMLELRHRQIGELSGGQKKRVFLARAIAQQGEVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMVKGTVLASGPTDITFTAENLERAFSGVLRHVVLSGSEDRIITDDERPFVAHRQEAK
>NZ_CP018814.1|WP_032608811.1|2253563_2254475_-|iron/manganese-ABC-transporter-substrate-binding-protein-SitA
MHPRQGLKRLLLGALLMTATTTGALAAEKFQVITTFTVIADMAKNVAGDAAEVTSITKPGAEIHEYQPTPGDIKRAQKAQLILANGMNLELWFQRFYQHLNGVPEVIVTKGITPMGISEGPYNGKPNPHAWMSPDNALIYVDNIRDALVKYDPANAQTYQRNADAYKQKITATLEPLRKQVAEIPEDKRWMVTSEGAFSYQARDLGLKELYLWPINADQQGTPQQVRKVIDLVKKHHIPAVFSESTVSDKPARQVARETGAHYGGVLYVDSLSAENGPVPTYIDLLNVTTRTLVQGIRDGMKE
>NZ_CP018814.1|WP_032608809.1|2254686_2254971_-|helix-turn-helix-domain-containing-protein
MSIFNELKSSLEEAVQIHNGRKAASRVTRYEVADVRAIREQLNITQSEMAKALGTSVDTIKSWESKRRNPTGLAAKVLNVIRENPAFYKALAGQ
>NZ_CP018814.1|WP_032610190.1|2254973_2255360_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSHAIEFIETSLFTRQIKSIATDDELKDLQKELIAWPDKGDLIQQTGGLRKIRMAAGSKGKRGGIRVIYFLATEEVIYFIMAYPKCIKDSLTETEKAELKKLTSILKNTASSAVNLRCTMYPNQAGGG
>NZ_CP018814.1|WP_032608807.1|2255498_2257532_-|choline-BCCT-transporter-BetT
MTDLSQDREKDKINPVVFYTSAGLILLFSLTTIFFRDFSAEWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTMEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKKINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPTEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVMGTLIIPFTFTLLWLSIFGNSALHEIIHGNATFAQEAMAHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSKLKDINSDAPNWLRIFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRVSASRDTAPRPLGAQDRLSWKKRLSRLMNYPGTRYTKQMMETVCFPAMEEVAQELRLRGAYVELKNLPPEEGENLGHLDLLVHMGDEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGNSVMFPDV
>NZ_CP018814.1|WP_003858827.1|2257660_2258248_+|transcriptional-regulator-BetI
MPKVGMQPIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFKDKNGLLEATMRDITGQLRDAVLSRLRALPDGSAEQRLQAIVGGNFDETQVSGAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVYEFRRELPREQAEEAGYGLAALIDGLWLRAALSGKPLDKTLAQSLTSHFISQHLPTD
>NZ_CP018814.1|WP_022650555.1|2258261_2259734_+|betaine-aldehyde-dehydrogenase
MSRMAEQQLYINGGYTSATSGRTFETINPANGEVLATVQAAGREDVDRAVESAKRGQKIWAAMTAMERSRILRRAVDILRERNDELATLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKFKAAFEQKIVERVGRIRAGDLFDEATNFGPMVSFPHRDSVMRYIAKGKEEGARVLCGGDVLKGEGFDNGAWVAPTVFTDCTDEMTIVREEIFGPVMSILTYESIEEAIRRANDTDYGLAAGIVTTDLNRAHGAIHQLEAGICWINTWGESAAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMGKFQSIF

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Crispr_ID: NZ_CP018814_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018814_3

3247102-3247196

Orphan

Consensus_repeat	Method
TGTTGCCACTGGCAACAGTGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018814_3

>merge|NZ_CP018814|3|3247102-3247196|CRISPRCasFinder
TGTTGCCACTGGCAACAGTGCTCGCTTTTTAGCCAGTGTTGCCACTGGCAACAGTGCTTACTTTTTAGTCAGTGTTGCCACTGGCAACAGCGCTC

>NZ_CP018814|3|3|3247102-3247196|CRISPRCasFinder
TGTTGCCACTGGCAACAGTGCTC	GCTTTTTAGCCAGTGTTGCCACTGGCAACAGTGCTTACTTTTTAGTCAG
TGTTGCCACTGGCAACAGCGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018814.1\|WP_032608268.1\|3254309_3254930_+\|DUF2238-domain-containing-protein	unknown	unknown	gnl\|CDD\|182124
NZ_CP018814.1\|WP_032608272.1\|3249448_3250159_-\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NZ_CP018814.1\|WP_032608270.1\|3251848_3253219_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP018814.1\|WP_004115572.1\|3248606_3248855_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_003860199.1\|3261473_3262976_-\|glycine-betaine/L-proline-transporter-ProP	unknown	unknown	gnl\|CDD\|182611
NZ_CP018814.1\|WP_032608280.1\|3243634_3245644_-\|DNA-topoisomerase-III	unknown	unknown	gnl\|CDD\|236078
NZ_CP018814.1\|WP_016807972.1\|3238244_3238487_-\|DUF4160-domain-containing-protein	unknown	unknown	gnl\|CDD\|379344
NZ_CP018814.1\|WP_029396360.1\|3240067_3240475_-\|Cd(II)/Pb(II)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|131102
NZ_CP018814.1\|WP_004364974.1\|3240570_3241467_+\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_CP018814.1\|WP_016807974.1\|3239148_3239619_-\|DUF3577-domain-containing-protein	unknown	unknown	gnl\|CDD\|371899
NZ_CP018814.1\|WP_032608279.1\|3245659_3246214_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018814.1\|WP_032608275.1\|3247268_3248507_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379352
NZ_CP018814.1\|WP_032608271.1\|3250151_3251852_-\|chromosome-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|213858
NZ_CP018814.1\|WP_032608267.1\|3260487_3261441_+\|nickel/cobalt-transporter	unknown	unknown	gnl\|CDD\|225125
NZ_CP018814.1\|WP_016807973.1\|3238551_3239088_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236362
NZ_CP018814.1\|WP_006777722.1\|3248851_3249442_-\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP018814.1\|WP_032608277.1\|3246215_3246941_-\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|378089
NZ_CP018814.1\|WP_032608282.1\|3241470_3241983_+\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|173237
NZ_CP018814.1\|WP_032608269.1\|3253211_3254087_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP018814.1\|WP_032608281.1\|3242004_3243294_+\|ISL3-like-element-ISPpu12-family-transposase	unknown	unknown	gnl\|CDD\|376574

Protein	Function_ID	Function_description	E-value
NZ_CP018814.1\|WP_032608268.1\|3254309_3254930_+\|DUF2238-domain-containing-protein	gnl\|CDD\|182124	PRK09867, PRK09867, hypothetical protein; Provisional.	1.87934e-129
NZ_CP018814.1\|WP_032608272.1\|3249448_3250159_-\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	2.00067e-09
NZ_CP018814.1\|WP_032608281.1\|3242004_3243294_+\|ISL3-like-element-ISPpu12-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	5.68137e-75
NZ_CP018814.1\|WP_003860199.1\|3261473_3262976_-\|glycine-betaine/L-proline-transporter-ProP	gnl\|CDD\|182611	PRK10642, PRK10642, proline/glycine betaine transporter ProP.	0
NZ_CP018814.1\|WP_029396360.1\|3240067_3240475_-\|Cd(II)/Pb(II)-responsive-transcriptional-regulator	gnl\|CDD\|131102	TIGR02047, putative_regulatory_protein, Cd(II)/Pb(II)-responsive transcriptional regulator. This model represents the cadmium(II) and/or lead(II) responsive transcriptional activator of the proteobacterial metal efflux system. This protein is a member of the MerR family of transcriptional activators (pfam00376) and contains a distinctive pattern of cysteine residues in its metal binding loop, Cys-X(6-9)-Cys, as well as a conserved and critical cysteine at the N-terminal end of the dimerization helix. [Regulatory functions, DNA interactions].	1.80574e-70
NZ_CP018814.1\|WP_004364974.1\|3240570_3241467_+\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	9.84117e-31
NZ_CP018814.1\|WP_016807974.1\|3239148_3239619_-\|DUF3577-domain-containing-protein	gnl\|CDD\|371899	pfam12101, DUF3577, Protein of unknown function (DUF3577). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 143 to 307 amino acids in length.	1.79959e-78
NZ_CP018814.1\|WP_016807972.1\|3238244_3238487_-\|DUF4160-domain-containing-protein	gnl\|CDD\|379344	pfam13711, DUF4160, Domain of unknown function (DUF4160).	4.19872e-16
NZ_CP018814.1\|WP_032608275.1\|3247268_3248507_-\|hypothetical-protein	gnl\|CDD\|379352	pfam13730, HTH_36, Helix-turn-helix domain.	4.50695e-05
NZ_CP018814.1\|WP_032608271.1\|3250151_3251852_-\|chromosome-partitioning-protein-ParB	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	4.09357e-150
NZ_CP018814.1\|WP_032608267.1\|3260487_3261441_+\|nickel/cobalt-transporter	gnl\|CDD\|225125	COG2215, COG2215, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.05336e-52
NZ_CP018814.1\|WP_016807973.1\|3238551_3239088_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	1.04176e-91
NZ_CP018814.1\|WP_006777722.1\|3248851_3249442_-\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	1.79678e-77
NZ_CP018814.1\|WP_032608277.1\|3246215_3246941_-\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|378089	pfam08900, DUF1845, Domain of unknown function (DUF1845). This family of proteins are functionally uncharacterized.	2.77076e-102
NZ_CP018814.1\|WP_032608282.1\|3241470_3241983_+\|signal-peptidase-II	gnl\|CDD\|173237	PRK14776, PRK14776, lipoprotein signal peptidase; Provisional.	1.44856e-113
NZ_CP018814.1\|WP_032608269.1\|3253211_3254087_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	7.2494e-23
NZ_CP018814.1\|WP_032608280.1\|3243634_3245644_-\|DNA-topoisomerase-III	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP018814.1\|WP_032608270.1\|3251848_3253219_-\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0

>NZ_CP018814.1|WP_032608277.1|3246215_3246941_-|TIGR03761-family-integrating-conjugative-element-protein
MSDGKTKGGTTASRAGALQSSVNILLHTHYAIRLWEGRKRDAPDETGVKKKRPEIISMPQAIARAGNASRDSAADNPYADMALVRLEEALQRATLKINENVSSLDARLSAVPKGVTLSEVESADPLNISVFSRSPLGYRCVWLLVGYDQLAMKAFQAFHYGLISRSQRDTILDNGGHAVRQVYGVIQPYRTLAVTRRDIAEKTTQGLVAIERNGEPDPDVLSGKKRSSFSPPLKNNIAEEE
>NZ_CP018814.1|WP_032608279.1|3245659_3246214_-|hypothetical-protein
MIRPVFLLTSFFLLSGCATTDWAAINKQVSDTAANLTKTLGGNSSGESGGMPLMSPAGQQAMKSVDKTFSVPVDVDTAAARLKRHYKFISTQELEALRQAANDGDWKAAAEDDAHPVWDAMPGSYYKMGSDWNERDHLDIEIEKNGSGSRLYVVYRSSSSQRLAGSGVTKLMNDVRAVAAGEKR
>NZ_CP018814.1|WP_032608280.1|3243634_3245644_-|DNA-topoisomerase-III
MQLFLCEKPSQAKDIARVLGISKREQGFISGGNIVVTWAVGHLLETASPEAYGEQYGRPWRADVLPVLPETWEMVVKEQTKSQFTVISKLLKKASEVVIATDADREGEVIARELLEYCRYSGAVRRLWLSALDEASVKEALGNILPGEKTALLYDAGKGRSQADWLIGMNLTRLYTLKARDSGVSEVLSVGRVQTPTLAMVVNRDNEITSFVPKPWWQVHALIEKEGVRFRAGWVPVEQYCDEEKRCINPQAARAVGQLCQQQGRAAVLEVTQKREKTAAPLCFDLGTLQQVCSRKFGMGANDVLAIAQSLYETHKATTYPRTDCGFLPTSMQQEISDVLAAVAKSDPAVAPVLNQLDRQFVSRVWNDKKITAHHAIIPTRQAFDLSRLSADELKVYQLIRQHYFAQFLPLQESDVTEASFNIGGQLFRTRGKVGVVTGWKSLFQAEKDDDEEDVDGDSMALPALAKGDICAVTGSEVKDMKTSPPKPFTEGTLIAAMKNAASFVSDPKLKKVLRDNAGLGTEATRAAVLETLFKRHYLEKKGKHIHSTQMARELIAALPETLTSPGMTALWEQALDDISQGKMSLAVFMQKQLQWTRHLVEKGRQDSVKITAPVTPPCPLCKGPTRKRKGKNGDFWGCIRYPDCEGIISTGKKKAAKRKKTSVKAKTE
>NZ_CP018814.1|WP_032608281.1|3242004_3243294_+|ISL3-like-element-ISPpu12-family-transposase
MTELPDNILHLPQYQVLGCKSTDDEMHFQVDMPDPIACEECGVQGEFVRFGKRDVPYRDLPIHGKRVTLWVVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQDVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDAPERVRKGLRKELKPSQSRTLKGDRKILLKRAHEVPDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRLQAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVDLSTI
>NZ_CP018814.1|WP_032608282.1|3241470_3241983_+|signal-peptidase-II
MLIIGKKLSPYALLSISGLLAASDQAVKWLVQQSMAYGEYVSVTPFFNWVHLWNTGAAFSLFANGGGWQRYFFIGIAVVISIFLIKLILENRHKGEAIAYSLILGGAMGNLIDRVFRGYVVDSFDFYWRDWHWPAFNLADIAIVLGALLFVSSSLLGKKANTNAESDGSD
>NZ_CP018814.1|WP_004364974.1|3240570_3241467_+|cation-transporter
MSKSCGGACGGDATSAADTDIQASSEAPGRWVSVYAVPKMDCPSEERMIRLALNGFEEIRALSFDLSNRRLKVVHDGEVEPVTSKLKTLGLGASLQETVAANPETIKAAEFSAASAKQESGTLRWLLGINALLFVVEMTAGLIARSTGLIGESLDNFADAAVYGLALYAVGHSVKMQVRAAHLAGVLQLILAVGVLVEVVRRFVFGSEPESLVMMAIAFVALIANTSCLLLISKHREGGAHMKASWIFSANDVVINLGVITAGALVAWTGSNYPDLIIGTIAGGIVLNGARRILALKG
>NZ_CP018814.1|WP_029396360.1|3240067_3240475_-|Cd(II)/Pb(II)-responsive-transcriptional-regulator
MRIGQLAQLVGVETQTIRFYEQQGLLPPPDRQDNGYRVYTEKHGEGLAFIRRCRILGLSLAEIHELQSYQDAPHQPCTAVNALLDDHISHVRSQITALQALEKQLVSLRASCNDDREVEACGVLAGISEGNMHQQ
>NZ_CP018814.1|WP_016807974.1|3239148_3239619_-|DUF3577-domain-containing-protein
MSANNTSASAKSEYFNLTIKGIGYLSNIRQVNHQNGSFLSCVINALSGPTDNPAYVRFDISVAGKEATSLIARCQKAVDEDKKVLLGFNLSNPSTDIFTLNKGEHAGEQRVSLKARLIKVDWIKIGQDMVYKTEKSDSVPPQNGSAAQQNYAENSF
>NZ_CP018814.1|WP_016807973.1|3238551_3239088_-|single-stranded-DNA-binding-protein
MSSRGVNKVILVGNLGQDPEVRYIPNGSAVATLSLATSESWRDKQSGEQKEVTEWHRVVIFGKLAEIAGEYLRKGSQVYIEGQLRTRKWTDQSGQEKYITEVVVNIGGTMQMLGGRQSGSGQNTSSRNDWGQPQQPSGPTHSGQASGSSAGAPPMDFDDDIPFIGFGYGVPKSAIHAL
>NZ_CP018814.1|WP_016807972.1|3238244_3238487_-|DUF4160-domain-containing-protein
MPVILRINGFRFFFYSNEGNPLEPAHIHVMKAGSEAKFWLTPSVALASNDGFNSRVLKELTGIVEDNQALFLEAWNDYFS
>NZ_CP018814.1|WP_032608275.1|3247268_3248507_-|hypothetical-protein
MSLPAESLIAYTLDKMNARLAASPRRDDGRIRNGLLFTGNVHDSIPRRLLLDTRLSPLDKMGWMMIRLYAQNNEGAVFPSYDELQLQLASPGKGNASRETVSRVLLMLRITGWLSLCKRVRDDKGRVRGNIYAQHDEPLTFSDAEMLDPRFLDTVADACLSKNRTISQTAREVLDDIKNDPTMRHYRSHLALIESRLDRPQTPSQMAKHHHRIPCPAPGSETELSHKRPGIVAKKQGSDTELSPERYNNSLSSESVLPVKTGSYGRVRKPNHYVRSITHSVNKNTYVPGKPVLPDSLHELVPAEDIAMLTAQLQALPEEQAQLVLLSLQKVMARQQLSNPVGWLLAVMKKAREGRLYAPRQGGDISDSVGQKTVQRPEQQRWKPEPRASARPVSEENIRDLVKKIREKIINS
>NZ_CP018814.1|WP_004115572.1|3248606_3248855_-|hypothetical-protein
MKYRMVAPGLRAPHGTPPQCCQKALRQVRRFRQGARNYTRLDEKGCGYYKIDLGPFWRLLSRNEGRTWLLLSHERYNSAIRK
>NZ_CP018814.1|WP_006777722.1|3248851_3249442_-|DUF2857-domain-containing-protein
MMNSLSQAANGLLMQLVMDLRSGYLRRCESLGLNREEMQMLQGLSLEELHYLSGSEVSIISVGINHGNLVRMLQQARTEQKRLQRIDRALALGGSIELMANYFGLSSTDVAARRRIAGIDVRPGRGNALGDEENAALWRQWQKSGVEDAESADGLDVMMLAAEQMNVSLTSVWHAVRGWHKTRQPSPARTPVRKTA
>NZ_CP018814.1|WP_032608272.1|3249448_3250159_-|DUF2786-domain-containing-protein
MNNSQRQLRLLNLVRKLLKLGRSNSNAHEAGLALQRAQKLMARYGISELDAGLTSVREASSRTAPSDAEKVPEWMVTLVRGVCHAFGCQAYYSWRQTSAGYRRSVTFYGFSEKPEIAAYAFDVLTRQLKDATNSYLKTQSKRLKLATRRARAEQFRNGWVCGVREVISATDISSEEQQVMSHWLESRSMKTVTTRELKACRGADTARYQGYEAGQNARLHQGVSGRGPAAIGYRQD
>NZ_CP018814.1|WP_032608271.1|3250151_3251852_-|chromosome-partitioning-protein-ParB
MSRKSSNVGAAMLQPGRQSQAAGNISVMPAAEMPMVLTLDQLSPNPDNPRTSRNPRYDDIKASIRSRGLDTVPKVTRDPDGEPDMYIFSDGGNTRYQILSELWQETGEDRFFRVHVLFKPWPGRLQCVIGHLAENEVRGELSFIEKAQGIHKARSIYEEQMGKTVSLRQLSELLTHEGLPVHYSTVSRMEDALKYLYPWIPDLLESGLGRPQITSLLALRHDAERVWDEFCLISDTGDKSFSDVFGQCCGRFNSPELWSLEMFRDEFIGDLLQALPHPELDYDRWMMELDPKERNRRHHFGEPETVAFPAANKPVNADHALHTTGSDESEGVPLPVSSSRPEVSGGAVTPVPGNASSPSETPINEPPRHEVQPDMYGAAPVISGESGDVSGLVTLSNGYGEENGGEEDNGEDGLLSLLTPEPEVVLQDDAPVTNDSIWHVPAHQDDIEHLQNTAFRLAWELGEVLGCEDEILPQRDKDTSAGYVGAGEVCSEAAAFLLGLTGEAPVLHPAAGVCGLPELFTGGPGEGEAPVLTDEDALKLLRLMRVMRRLRELQRGLKYGEDNSDE
>NZ_CP018814.1|WP_032608270.1|3251848_3253219_-|replicative-DNA-helicase
MSEMMMPCSYEAEQAVLGGLMLDNDRWDEVILQISPEDLFSRPHRMVFRVMAELAGEGLPLDLITITERLENRGDLEQCGGFAYLAEMSKNTPSAANILAYAGVVAEKSRLRQLMTVGNSLLSDVQAPKASSAGILESAEGKLFNIAEQGAMQLNSETGVNEALDKLLTQLESMSASDGLTGTPTGFSELDAMTCGLQPGDLALLAARPSMGKTSLAMAACTAAVSAKPDDNVFVFSLEMPSEQLMMRLLAMEGRVELSRLRSGNMDDEDWARVSEATGRIIEWKNRLIIDDTSYQTPATLRARARRYVRKYGRPSLIMLDYLQLVRSPEQENRTQEIAEISRSLKALGKELGCPVLALSQLNRLVEQRADKRPNNGDLRDSGALEQDADLIMFIYRDEVYNPGTPDAGVAEIIVGKQRQGPTGTVKVKFDGRYTLFSEFQEGSYDFGYRSGRKQA
>NZ_CP018814.1|WP_032608269.1|3253211_3254087_-|ParA-family-protein
MKILPVISPKGGEGKSTFAAYLAGFLADAGLNTLLVDADYSQPTASSIFALEHESPFGLYELLMQMVSDHTQCISQTAIKNLDVIYSNDPDELLPTAMLHAADGRLRLRNILQHSFFNRYDVIIVDSKGATGVMTELSLLSSTGNVMGVVKPILPDVREFIRGSLHMLTRLKTYENYGIRLPDISILVNCIENTLLDREAMDGLAAIINEKHYDASALGNRDVYRLLDTRIEALDIFKLGHVKQQPVHRLEYKTRRKGPAAAVTMHDLASELFPEWQSHFSDVLTREVRHV
>NZ_CP018814.1|WP_032608268.1|3254309_3254930_+|DUF2238-domain-containing-protein
MTLSALKAGSLLLLMILFYTGLFTSDRVTWLMEVTPVIIIIPLLLATHRRYPLTPLLYTLVFFHAIILMVGGMYTYAKVPVGFEVQEMLGLSRNPYDKLGHFFQGLVPALAAREILLRGGYVRGHKMTGFLVCCVALAISATYELIEWWAALAMGQGADDFLGTQGDPWDTQSDMFCALLGALTTVLILGRFHQRQLRRLNVDSAL
>NZ_CP018814.1|WP_032608267.1|3260487_3261441_+|nickel/cobalt-transporter
MTTQRLQRDWRLPTAGLAVLVLLMAGFALHEHWNAFIQWCLATQITLHRYLVMYLLQLNNHQYSGGLWLLTGAFLYGVLHAVGPGHGKFIVTTYLTTNKESQLAARVVPFIGSLMQGVSAIAFVFILAVGLNLASGDISTSRWYVEKISALLIAAFGAFIIYQALSSLRPRKMAISAIKPLHQHNEHCGCGHHGVGVDLAKSDWKTRLGVVLAIGARPCSGAIMILMFSNALGIISWGIAAVMTMSLGTALSIMGLSLAVRYARERTVAWFGGGTSLNWIMPMVKIAGGVVLILFATVLFLTVIPVSAGGDYIAAGC
>NZ_CP018814.1|WP_003860199.1|3261473_3262976_-|glycine-betaine/L-proline-transporter-ProP
MLRRKKVKPITLRDVTIIDDAKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSLQMIAALGTFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVMGAGVVVLISTVVGEENFLDWGWRIPFFLALPLGIIGLYLRHALEETPAFQQHVEKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVISTNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMVGMLFVQPIMGLLSDRFGRKPFIILGSVALFALAIPAFILINSNVLGLIFAGLLMLAVILNCFIGVMASTLPAMFPTHIRYSALAAAFNISVLIAGLTPTLAASLVESTQNLMMPAYYLMVIAVVGLITGITMKETANRPLKGATPAASDIQEAKEILREHYDNVEQKIEDIDAEIEALQKKRSRLVDQHPRINE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018814_1	1.1\|44011\|34\|NZ_CP018814\|CRISPRCasFinder	44011-44044	34	MH178096	Aeromonas phage AsXd-1, complete genome	10853-10886	0	1.0

1. spacer 1.1|44011|34|NZ_CP018814|CRISPRCasFinder matches to MH178096 (Aeromonas phage AsXd-1, complete genome) position: , mismatch: 0, identity: 1.0

aatcgttcactacctggtgcagcagattcacccc	CRISPR spacer
aatcgttcactacctggtgcagcagattcacccc	Protospacer
**********************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

14667 : 161433

164

Escherichia_phage(20.0%)

portal,holin,plate,integrase,tail,tRNA,lysis,capsid,terminase,head

attL 86240:86257|attR 118801:118818

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032609956.1\|14667_15936_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_032609954.1\|15886_17212_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_032609953.1\|17227_18832_+	hypothetical protein	NA	NA	NA	NA
WP_032609952.1\|18841_19240_+	hypothetical protein	NA	NA	NA	NA
WP_032609951.1\|19334_19763_+	hypothetical protein	NA	NA	NA	NA
WP_071886179.1\|19803_20067_-	cell wall-binding protein	NA	NA	NA	NA
WP_032609950.1\|20091_20478_-	hypothetical protein	NA	NA	NA	NA
WP_114143817.1\|21015_22476_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_032609947.1\|22444_22882_-	hypothetical protein	NA	NA	NA	NA
WP_044596283.1\|23084_23888_-	hypothetical protein	I6PD67	Cronobacter_phage	7.6e-17	30.3
WP_023323125.1\|23906_24113_-	hypothetical protein	NA	NA	NA	NA
WP_032609946.1\|24276_24774_+	hypothetical protein	NA	NA	NA	NA
WP_032609944.1\|24928_26644_-	ATP-binding protein	NA	NA	NA	NA
WP_032610271.1\|26643_27828_-	hypothetical protein	NA	NA	NA	NA
WP_032609942.1\|28235_28508_+	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA
WP_032609941.1\|28507_29896_+	His-Xaa-Ser system radical SAM maturase HxsB	S5VT21	Leptospira_phage	1.7e-48	28.7
WP_032609940.1\|29888_31001_+	His-Xaa-Ser system radical SAM maturase HxsC	NA	NA	NA	NA
WP_071886178.1\|30997_31600_+	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA
WP_050596973.1\|31627_32761_+	TIGR04141 family sporadically distributed protein	NA	NA	NA	NA
WP_032609938.1\|32908_33340_+	TIGR04141 family sporadically distributed protein	NA	NA	NA	NA
WP_032609936.1\|33430_34321_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_032609935.1\|34317_35214_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_032609933.1\|35203_36760_-	recombinase family protein	A0A0A7RTP8	Clostridium_phage	1.4e-19	31.0
WP_032609931.1\|37042_38272_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	1.1e-205	85.6
WP_032610629.1\|38595_39768_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	5.0e-211	93.3
WP_000050710.1\|39722_39932_-	hypothetical protein	I6PBM8	Cronobacter_phage	4.4e-33	97.1
WP_032610627.1\|39921_40206_-	hypothetical protein	NA	NA	NA	NA
WP_032610626.1\|40309_40723_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	2.0e-45	64.2
WP_023296234.1\|40912_41320_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	2.1e-47	87.5
WP_032610625.1\|41312_41534_-	hypothetical protein	NA	NA	NA	NA
WP_032610624.1\|41640_42030_-	S24 family peptidase	F1C5A0	Cronobacter_phage	4.0e-32	58.8
WP_032610623.1\|42111_42405_-	hypothetical protein	NA	NA	NA	NA
WP_023296237.1\|42576_43269_-	helix-turn-helix transcriptional regulator	A0A2H4FNG6	Salmonella_phage	4.3e-85	65.4
WP_048859479.1\|43422_43638_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	2.4e-10	50.0
WP_087920840.1\|43716_44526_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.6e-83	64.1
WP_032610621.1\|44541_45423_+	ATP-binding protein	Q8W641	Enterobacteria_phage	1.8e-80	62.4
WP_032610619.1\|45419_46799_+	AAA family ATPase	Q8W640	Enterobacteria_phage	6.4e-173	67.9
WP_032610617.1\|46826_47609_+	antitermination protein	F1C595	Cronobacter_phage	3.1e-108	76.4
WP_017384387.1\|48605_48995_+	membrane protein	G8C7V8	Escherichia_phage	1.1e-58	92.2
WP_017384386.1\|48984_49263_+\|holin	phage holin family protein	G8C7V9	Escherichia_phage	1.7e-37	85.9
WP_032610613.1\|49262_49892_+	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	2.7e-102	87.6
WP_071886186.1\|49899_50169_+	hypothetical protein	G8C7W1	Escherichia_phage	2.0e-30	82.0
WP_032610608.1\|50418_51117_-	hypothetical protein	NA	NA	NA	NA
WP_032610607.1\|51205_52663_+	glycosyl transferase	K7PKP3	Enterobacterial_phage	4.0e-274	92.6
WP_071886177.1\|52644_53235_+	hypothetical protein	K7PGW6	Enterobacterial_phage	1.2e-88	76.0
WP_032610606.1\|53234_53585_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	2.7e-51	81.0
WP_032610605.1\|53742_54216_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	7.2e-84	95.5
WP_052686367.1\|55050_56007_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	1.5e-88	55.2
WP_032610603.1\|56009_56348_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	9.2e-49	77.7
WP_032610602.1\|56344_57100_+\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	1.0e-135	92.4
WP_032610600.1\|57101_57812_+	peptidase P60	K7PJV6	Enterobacteria_phage	1.5e-141	96.2
WP_032610599.1\|57840_58188_+	hypothetical protein	NA	NA	NA	NA
WP_032610598.1\|58214_58805_+\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	3.8e-90	85.2
WP_032610597.1\|58859_62657_+\|tail	phage tail protein	K7PHL5	Enterobacterial_phage	0.0e+00	83.5
WP_032610596.1\|62700_63015_+	hypothetical protein	A0A2P0WA17	Enterobacter_phage	6.4e-36	71.6
WP_032610595.1\|63015_63687_+	hypothetical protein	A0A2P0WA07	Enterobacter_phage	1.1e-85	70.9
WP_032610594.1\|63794_64028_+	hypothetical protein	E4WL42	Enterobacteria_phage	2.5e-29	75.3
WP_077870385.1\|64085_65213_+\|tail	tail fiber domain-containing protein	A0A2I6PID3	Escherichia_phage	2.1e-52	37.3
WP_071886176.1\|65466_65820_-	hypothetical protein	NA	NA	NA	NA
WP_123906383.1\|66580_67006_+	hypothetical protein	K7P834	Enterobacteria_phage	2.4e-25	47.2
WP_013096351.1\|67092_67332_-	DinI family protein	K7PKM2	Enterobacterial_phage	2.2e-33	89.9
WP_003863115.1\|68055_68538_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	6.8e-29	46.8
WP_006811645.1\|68655_69132_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_003863119.1\|69121_69409_+	RnfH family protein	NA	NA	NA	NA
WP_032609930.1\|69470_69809_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_071524123.1\|69790_69973_-	hypothetical protein	NA	NA	NA	NA
WP_023314691.1\|69947_71609_-	DNA repair protein RecN	NA	NA	NA	NA
WP_003863124.1\|71694_72573_-	NAD(+) kinase	NA	NA	NA	NA
WP_003863126.1\|72695_73289_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_032609927.1\|73341_74628_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_020883913.1\|74647_75514_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_003863132.1\|75605_76967_+	signal recognition particle protein	NA	NA	NA	NA
WP_003863133.1\|77083_77332_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_032609925.1\|77347_77887_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003863138.1\|77918_78686_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_002914145.1\|78729_79077_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_003863141.1\|79209_79614_+	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_032609922.1\|79652_81023_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_003863144.1\|81025_81511_-	OmpA family protein	NA	NA	NA	NA
WP_032609921.1\|81523_82744_-	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	1.2e-05	39.8
WP_003863149.1\|82736_83273_-	YfiR family protein	NA	NA	NA	NA
WP_003863151.1\|83426_83801_-	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_006811632.1\|84013_85084_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.5e-89	51.5
WP_022649060.1\|85094_86216_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
86240:86257	attL	NA	NA	NA	NA
WP_032609917.1\|86404_87385_-\|integrase	tyrosine-type recombinase/integrase	S4TP66	Salmonella_phage	4.4e-152	80.1
WP_032610269.1\|87454_87748_-	helix-turn-helix transcriptional regulator	Q1JS21	Enterobacteria_phage	4.2e-34	68.0
WP_023295263.1\|87907_88180_+	hypothetical protein	Q1JS20	Enterobacteria_phage	3.4e-38	82.2
WP_032609915.1\|88182_88362_+	hypothetical protein	S4TNZ7	Salmonella_phage	8.1e-12	66.7
WP_032609913.1\|88352_88853_+	hypothetical protein	M1SV55	Escherichia_phage	2.5e-82	88.6
WP_044704157.1\|88918_89134_+	DUF2732 family protein	NA	NA	NA	NA
WP_032609912.1\|89150_89426_+	DUF5405 family protein	A0A0F7LCM4	Escherichia_phage	9.8e-25	59.3
WP_032609910.1\|89415_91701_+	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	74.9
WP_032609909.1\|91706_92171_+	DUF3850 domain-containing protein	Q2P9X4	Enterobacteria_phage	4.4e-41	54.9
WP_048859478.1\|92577_93114_+	hypothetical protein	NA	NA	NA	NA
WP_032610267.1\|93214_93553_+	hypothetical protein	NA	NA	NA	NA
WP_032609906.1\|93945_94971_-\|portal	phage portal protein	Q6K1J0	Salmonella_virus	2.7e-168	83.0
WP_032609904.1\|94972_96742_-\|terminase	terminase ATPase subunit family protein	A0A218M4M1	Erwinia_phage	6.1e-301	85.1
WP_032609903.1\|96907_97762_+\|capsid	GPO family capsid scaffolding protein	S4TP53	Salmonella_phage	7.6e-116	74.6
WP_023295252.1\|97817_98885_+\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	9.7e-169	83.6
WP_032609901.1\|98888_99644_+\|terminase	terminase endonuclease subunit	A0A0M4QWM0	Salmonella_phage	2.2e-74	69.3
WP_032609900.1\|99743_100250_+\|head	head completion/stabilization protein	O80306	Escherichia_phage	9.9e-63	71.4
WP_017382979.1\|100249_100453_+\|tail	tail protein	Q858W3	Yersinia_virus	3.3e-25	79.1
WP_014170137.1\|100443_100665_+	hypothetical protein	A0A218M4L5	Erwinia_phage	2.1e-25	72.6
WP_032609897.1\|100648_101161_+	lysozyme	A0A218M4K3	Erwinia_phage	2.3e-83	88.8
WP_032609896.1\|101157_101589_+	hypothetical protein	A0A218M4L6	Erwinia_phage	1.8e-57	77.6
WP_032609895.1\|101588_102005_+\|lysis	LysB family phage lysis regulatory protein	A0A218M4K2	Erwinia_phage	3.5e-42	67.2
WP_023295244.1\|102100_102568_+\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	8.0e-59	69.0
WP_032609894.1\|102560_103013_+	phage virion morphogenesis protein	O80313	Escherichia_phage	5.7e-46	64.6
WP_032609893.1\|103264_103822_+	SLATT domain-containing protein	NA	NA	NA	NA
WP_032609892.1\|103796_105170_+	reverse transcriptase	NA	NA	NA	NA
WP_032609891.1\|105248_105761_-	hypothetical protein	NA	NA	NA	NA
WP_032609890.1\|105967_106609_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	5.6e-95	81.7
WP_023323587.1\|106605_106956_+	hypothetical protein	A0A0M4RE59	Salmonella_phage	8.1e-40	72.4
WP_023323586.1\|106961_107870_+\|plate	baseplate assembly protein	S4TNY7	Salmonella_phage	8.3e-137	83.8
WP_032609889.1\|107862_108393_+\|tail	phage tail protein I	Q37841	Escherichia_phage	1.4e-91	86.9
WP_032609887.1\|108404_110753_+\|tail	tail fiber protein	A0A0F7LDR4	Escherichia_phage	8.8e-114	47.0
WP_032609885.1\|110754_111186_+\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	5.3e-17	55.1
WP_032609883.1\|111560_112754_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	4.1e-184	81.1
WP_023295232.1\|112766_113285_+\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	2.9e-78	81.4
WP_032609880.1\|113342_113666_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	4.4e-24	64.0
WP_017382998.1\|113698_113821_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	5.9e-14	89.7
WP_032609878.1\|113810_116261_+\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	9.3e-300	74.9
WP_032609877.1\|116271_116736_+\|tail	phage tail protein	A0A218M4I2	Erwinia_phage	7.2e-60	72.1
WP_032609875.1\|116732_117902_+	phage late control D family protein	Q6K1G4	Salmonella_virus	7.9e-172	78.8
WP_023323577.1\|117978_118200_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	4.9e-27	72.6
WP_044596285.1\|118245_118638_-	hypothetical protein	S4TTB4	Salmonella_phage	9.7e-26	44.2
WP_032609874.1\|118837_119710_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
118801:118818	attR	NA	NA	NA	NA
WP_023314685.1\|119706_120867_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_100229775.1\|120974_121022_-	hypothetical protein	NA	NA	NA	NA
WP_003863162.1\|121127_121469_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_003863164.1\|121736_122474_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_003863165.1\|122605_123586_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_003863167.1\|123582_124314_+	polyphenol oxidase	NA	NA	NA	NA
WP_032609871.1\|124443_127017_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.7
WP_006811623.1\|132667_133120_+	DUF4385 domain-containing protein	M4QHR1	Cyanophage	3.9e-34	50.0
WP_003860741.1\|133271_134579_+	MFS transporter	Q6JIH2	Burkholderia_virus	2.7e-43	29.6
WP_003860739.1\|134575_134899_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_032609868.1\|134944_136300_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_022651672.1\|136409_139073_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_003860734.1\|139108_139807_-	DTW domain-containing protein	NA	NA	NA	NA
WP_003860733.1\|139877_140297_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-13	37.2
WP_023314680.1\|140501_141587_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_003860729.1\|141626_142316_-	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	7.9e-55	48.8
WP_003860727.1\|142631_143015_+	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	2.1e-33	71.8
WP_003860725.1\|143067_144396_-	ATP-dependent RNA helicase SrmB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.7e-48	33.5
WP_032609866.1\|144528_145266_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_003860722.1\|145250_146870_-	L-aspartate oxidase	NA	NA	NA	NA
WP_006176728.1\|147296_147872_+	RNA polymerase sigma factor RpoE	A0A0F6TH34	Sinorhizobium_phage	8.2e-05	28.1
WP_032609863.1\|147903_148554_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_003860717.1\|148553_149507_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_003860716.1\|149503_149980_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_003860714.1\|150165_151971_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	1.1e-23	25.9
WP_003860712.1\|151986_152961_+	signal peptidase I	NA	NA	NA	NA
WP_003860711.1\|153184_153865_+	ribonuclease III	A0A2P0VNZ5	Tetraselmis_virus	9.6e-21	39.0
WP_003860709.1\|153861_154767_+	GTPase Era	NA	NA	NA	NA
WP_003860708.1\|154784_155492_+	DNA repair protein RecO	NA	NA	NA	NA
WP_003860707.1\|155567_156299_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_003860706.1\|156298_156679_+	holo-ACP synthase	NA	NA	NA	NA
WP_003860704.1\|156675_156936_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	51.2
WP_003860702.1\|156992_157841_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003860700.1\|157959_158856_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_032609861.1\|158865_160230_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_032609859.1\|160233_160869_+	acid phosphatase AphA	NA	NA	NA	NA
WP_022651606.1\|160893_161433_+\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA

DBSCAN-SWA_2

598682 : 607532

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032103484.1\|598682_599747_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	6.4e-104	54.4
WP_032609646.1\|599762_600629_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.8e-110	66.3
WP_032609645.1\|600641_601532_+	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	4.8e-28	31.3
WP_075155257.1\|601542_602091_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	5.9e-53	53.9
WP_023294999.1\|602226_603633_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	5.2e-37	28.3
WP_032609644.1\|603886_605053_+	UDP-glucose 6-dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	1.2e-111	53.5
WP_032609643.1\|606527_607532_-	NAD-dependent epimerase	A0A2K9L0I7	Tupanvirus	3.3e-33	29.0

DBSCAN-SWA_3

717006 : 728673

uncultured_Caudovirales_phage(22.22%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032609561.1\|717006_717348_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	3.7e-21	51.8
WP_032609560.1\|717344_718955_+\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	8.4e-225	70.3
WP_048859468.1\|718975_721222_+	hypothetical protein	A0A0F6TJC8	Escherichia_coli_O157_typing_phage	3.8e-66	46.0
WP_032609559.1\|721251_722733_-	hypothetical protein	NA	NA	NA	NA
WP_032609558.1\|722729_723671_-	glycosyltransferase family 2 protein	U5P087	Shigella_phage	5.5e-160	91.7
WP_023295990.1\|723667_724030_-	GtrA family protein	B9UDL8	Salmonella_phage	3.5e-46	75.0
WP_023295991.1\|724179_724410_+	hypothetical protein	A5LH82	Enterobacteria_phage	2.9e-22	71.0
WP_032609557.1\|724390_724930_+	lysozyme	H6WRZ4	Salmonella_phage	2.2e-92	89.3
WP_032609556.1\|724926_725286_+	hypothetical protein	R9TPM9	Aeromonas_phage	2.4e-15	45.5
WP_154817219.1\|725585_725948_-	hypothetical protein	NA	NA	NA	NA
WP_003859653.1\|726037_726361_+	hypothetical protein	NA	NA	NA	NA
WP_022651459.1\|726390_727317_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032609555.1\|727322_727793_-	hypothetical protein	NA	NA	NA	NA
WP_003859661.1\|727956_728673_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-12	28.5

DBSCAN-SWA_4

999951 : 1052708

Escherichia_phage(24.32%)

portal,protease,holin,plate,integrase,tail,lysis,capsid,terminase,head

attL 993346:993360|attR 1023961:1023975

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
993346:993360	attL	NA	NA	NA	NA
WP_032609415.1\|999951_1000962_-\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	1.2e-147	76.1
WP_014884155.1\|1001058_1001358_-	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	2.9e-38	74.7
WP_014884154.1\|1001482_1001758_+	hypothetical protein	Q1JS60	Enterobacteria_phage	6.8e-42	85.6
WP_014884153.1\|1001924_1002425_+	hypothetical protein	M1SV55	Escherichia_phage	7.4e-71	75.9
WP_014884152.1\|1002491_1002710_+	DUF2732 family protein	S4TP68	Salmonella_phage	3.8e-11	62.1
WP_014884151.1\|1002732_1002996_+	DUF5405 family protein	U5N3W1	Enterobacteria_phage	2.0e-22	57.0
WP_032609413.1\|1002997_1005295_+	replication endonuclease	Q858T4	Yersinia_virus	0.0e+00	75.5
WP_032609411.1\|1005291_1005576_+	hypothetical protein	NA	NA	NA	NA
WP_032609409.1\|1005723_1006278_+	hypothetical protein	NA	NA	NA	NA
WP_032609407.1\|1006959_1007478_-	hypothetical protein	NA	NA	NA	NA
WP_032609405.1\|1007480_1008680_-	ATP-binding protein	A0A0P0IKU8	Acinetobacter_phage	3.4e-53	32.6
WP_032609403.1\|1009007_1010033_-\|portal	phage portal protein	Q6K1J0	Salmonella_virus	2.1e-168	82.9
WP_032609402.1\|1010034_1011804_-\|terminase	terminase ATPase subunit family protein	A0A218M4M1	Erwinia_phage	1.1e-302	85.7
WP_032609401.1\|1011970_1012825_+\|capsid	GPO family capsid scaffolding protein	S4TP53	Salmonella_phage	1.0e-112	72.2
WP_032609400.1\|1012880_1013948_+\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	3.9e-170	83.3
WP_038421123.1\|1013951_1014707_+\|terminase	terminase endonuclease subunit	Q6K1I5	Salmonella_virus	7.5e-75	65.3
WP_032609395.1\|1014806_1015313_+\|head	head completion/stabilization protein	O80306	Escherichia_phage	7.1e-61	70.2
WP_032609394.1\|1015312_1015516_+\|tail	tail protein X	A0A218M4L8	Erwinia_phage	6.1e-24	76.1
WP_032609392.1\|1015506_1015728_+	hypothetical protein	A0A218M4L5	Erwinia_phage	7.1e-26	74.0
WP_032609391.1\|1015711_1016221_+	lysozyme	A0A218M4K3	Erwinia_phage	1.7e-78	86.9
WP_038421124.1\|1016217_1016643_+\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	9.2e-46	70.1
WP_072163335.1\|1016530_1016776_+\|holin	holin	S4TNY4	Salmonella_phage	1.0e-28	77.8
WP_032609387.1\|1016738_1017206_+\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	6.5e-61	71.6
WP_032609386.1\|1017198_1017648_+	phage virion morphogenesis protein	O80313	Escherichia_phage	2.6e-51	73.5
WP_032609384.1\|1017717_1018449_-	hypothetical protein	NA	NA	NA	NA
WP_032609382.1\|1018580_1019222_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	1.6e-97	83.1
WP_023338715.1\|1019218_1019569_+	hypothetical protein	A0A0M4RE59	Salmonella_phage	1.5e-38	69.8
WP_032609381.1\|1019574_1020483_+\|plate	baseplate assembly protein	Q6K1H4	Salmonella_virus	3.2e-136	83.1
WP_032609378.1\|1020475_1021006_+\|tail	phage tail protein I	Q37841	Escherichia_phage	1.5e-90	86.4
WP_032609376.1\|1022861_1023377_+\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	4.4e-18	36.8
WP_032609374.1\|1023751_1024945_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	8.3e-185	81.1
1023961:1023975	attR	NA	NA	NA	NA
WP_032609372.1\|1024957_1025476_+\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	8.5e-78	79.7
WP_032609371.1\|1025532_1025835_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.4e-27	73.6
WP_032609370.1\|1025867_1025990_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	1.0e-13	92.3
WP_032609369.1\|1025979_1028427_+\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	4.6e-283	72.1
WP_032609367.1\|1028439_1028904_+\|tail	phage tail protein	A0A218M4I2	Erwinia_phage	4.2e-60	72.1
WP_032609366.1\|1028900_1030070_+	phage late control D family protein	A0A218M4J7	Erwinia_phage	4.0e-160	76.9
WP_032609365.1\|1030146_1030368_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	6.0e-25	69.9
WP_032609364.1\|1030484_1031375_+	hypothetical protein	NA	NA	NA	NA
WP_032609363.1\|1031431_1031908_+	hypothetical protein	NA	NA	NA	NA
WP_003856755.1\|1032051_1032348_-	YciI family protein	NA	NA	NA	NA
WP_017384230.1\|1032569_1033298_+	TonB system transport protein TonB	NA	NA	NA	NA
WP_023314256.1\|1033336_1033732_-	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA
WP_032609360.1\|1033830_1036017_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_023324803.1\|1036197_1036737_-	septation protein A	NA	NA	NA	NA
WP_003856765.1\|1036750_1037494_-	UPF0259 family protein	NA	NA	NA	NA
WP_032609359.1\|1037519_1037924_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_003856769.1\|1038206_1038839_+	outer membrane protein OmpW	NA	NA	NA	NA
WP_003856774.1\|1039125_1039359_-	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_032609358.1\|1039355_1040567_-	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_032609356.1\|1040741_1041551_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_003856780.1\|1041550_1042744_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_032609355.1\|1042754_1044113_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	5.0e-37	41.0
WP_032609354.1\|1044116_1045712_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	1.2e-50	37.3
WP_032609352.1\|1045711_1047274_-	anthranilate synthase component 1	NA	NA	NA	NA
WP_071524153.1\|1047368_1047413_-	trp operon leader peptide	NA	NA	NA	NA
WP_003856787.1\|1047552_1048434_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_003856793.1\|1048430_1049051_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_003856794.1\|1049148_1050024_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_023314251.1\|1050060_1050651_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_017384219.1\|1050647_1051409_-	YciK family oxidoreductase	NA	NA	NA	NA
WP_022651351.1\|1051661_1052708_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-19	29.2

DBSCAN-SWA_5

2255498 : 2364919

116

Cronobacter_phage(29.85%)

transposase,holin,integrase,tail,terminase,head

attL 2314109:2314125|attR 2373879:2373895

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032608807.1\|2255498_2257532_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.6
WP_003858827.1\|2257660_2258248_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_022650555.1\|2258261_2259734_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_032608805.1\|2259747_2261412_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	5.2e-60	31.4
WP_003858833.1\|2261514_2262213_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_032608803.1\|2262413_2263982_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_022650553.1\|2264053_2265067_+	ABC transporter permease	NA	NA	NA	NA
WP_023324282.1\|2265066_2265900_+	ABC transporter permease	NA	NA	NA	NA
WP_032608801.1\|2265892_2266729_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.7e-15	31.9
WP_022650552.1\|2266715_2267420_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-21	34.8
WP_032608799.1\|2267489_2267963_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_003858846.1\|2268100_2268871_-	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA
WP_003858847.1\|2268891_2270571_-	acetolactate synthase AlsS	NA	NA	NA	NA
WP_003858848.1\|2270584_2271364_-	acetolactate decarboxylase	NA	NA	NA	NA
WP_022650550.1\|2271469_2272351_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032608797.1\|2272633_2273089_+	hypothetical protein	NA	NA	NA	NA
WP_032608796.1\|2273314_2274292_+	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	1.3e-87	52.2
WP_032608795.1\|2274426_2275476_-	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	1.0e-13	31.8
WP_032608794.1\|2277850_2278396_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_032608792.1\|2282624_2283062_-	DUF1795 domain-containing protein	NA	NA	NA	NA
WP_023324277.1\|2283192_2284314_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_032608791.1\|2284243_2287399_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_032608790.1\|2287408_2288473_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_032608787.1\|2288581_2291290_-	cation-transporting P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	3.8e-68	27.8
WP_003858875.1\|2291778_2292027_+	DUF1158 domain-containing protein	NA	NA	NA	NA
WP_032608785.1\|2292012_2293581_-	DUF3327 domain-containing protein	NA	NA	NA	NA
WP_032608783.1\|2293704_2295849_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_032608782.1\|2295955_2296297_-	RamA family antibiotic efflux transcriptional regulator	NA	NA	NA	NA
WP_032608780.1\|2296329_2297433_-	RomA family MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_032608778.1\|2298191_2298560_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_003858884.1\|2298680_2299334_+	oxygen-insensitive NAD(P)H nitroreductase	NA	NA	NA	NA
WP_003858885.1\|2299370_2299658_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.9e-05	38.1
WP_032608774.1\|2299931_2300801_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_032608773.1\|2300908_2302345_+	MFS transporter	NA	NA	NA	NA
WP_023315564.1\|2302412_2303657_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_032608772.1\|2303657_2304629_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.4e-25	32.6
WP_032608771.1\|2304704_2305847_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_032608769.1\|2305839_2306865_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_032608767.1\|2306880_2308116_-	MFS transporter	NA	NA	NA	NA
WP_003858894.1\|2308368_2309757_-	phenylalanine transporter	NA	NA	NA	NA
WP_032608766.1\|2309859_2311833_-	PhoX family phosphatase	NA	NA	NA	NA
WP_032665464.1\|2311960_2314144_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
2314109:2314125	attL	NA	NA	NA	NA
WP_003858898.1\|2314344_2314620_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_032608765.1\|2315068_2315458_-	DNA polymerase V	Q6UAV9	Klebsiella_phage	9.9e-47	69.0
WP_032608764.1\|2315578_2315761_+	hypothetical protein	NA	NA	NA	NA
WP_032608763.1\|2315767_2316130_+	GtrA family protein	B9UDL8	Salmonella_phage	6.8e-42	70.0
WP_032608760.1\|2316126_2317050_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	1.4e-160	91.8
WP_032608759.1\|2317042_2318515_+	hypothetical protein	NA	NA	NA	NA
WP_032608758.1\|2318602_2318989_-\|tail	phage tail fiber protein	A0A0F7LDZ0	Escherichia_phage	1.3e-17	56.6
WP_032608756.1\|2319522_2321739_-	hypothetical protein	F1C5A8	Cronobacter_phage	1.0e-39	61.4
WP_032608755.1\|2321797_2324275_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	0.0e+00	92.5
WP_032608754.1\|2324261_2324627_-	C40 family peptidase	F1C5F2	Cronobacter_phage	4.6e-62	90.8
WP_015571561.1\|2324640_2325111_-	hypothetical protein	F1C5F1	Cronobacter_phage	1.0e-66	80.1
WP_032608753.1\|2325110_2325608_-	hypothetical protein	F1C5F0	Cronobacter_phage	3.7e-86	89.1
WP_032608752.1\|2325607_2328514_-\|tail	tail protein (tape measure)	F1C5E9	Cronobacter_phage	1.3e-127	39.0
WP_032608750.1\|2328629_2328917_+	hypothetical protein	NA	NA	NA	NA
WP_032608748.1\|2328911_2329601_-	hypothetical protein	G0ZNE7	Cronobacter_phage	3.5e-55	51.1
WP_032608746.1\|2329658_2330402_-	Ig domain-containing protein	F1C5E5	Cronobacter_phage	2.2e-71	81.6
WP_000427623.1\|2330665_2331670_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_052238023.1\|2331851_2332346_-	HNH endonuclease	G0ZNE5	Cronobacter_phage	1.0e-32	50.7
WP_032608745.1\|2332445_2332829_-	hypothetical protein	F1C5E4	Cronobacter_phage	2.3e-40	64.6
WP_032608743.1\|2332825_2333290_-	hypothetical protein	A0A2P1MXA4	Escherichia_phage	1.2e-30	45.5
WP_032608742.1\|2333292_2333643_-	hypothetical protein	G0ZNE2	Cronobacter_phage	8.9e-39	66.1
WP_032608741.1\|2333642_2333816_-	hypothetical protein	Q5G8X7	Enterobacteria_phage	2.7e-12	50.9
WP_006808952.1\|2333815_2334196_-	hypothetical protein	F1C5E2	Cronobacter_phage	7.0e-29	54.5
WP_032608740.1\|2334198_2334564_-	hypothetical protein	NA	NA	NA	NA
WP_006808954.1\|2334573_2335671_-	hypothetical protein	F1C5E1	Cronobacter_phage	7.6e-161	77.5
WP_017693196.1\|2335681_2336116_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.4e-49	72.2
WP_032608738.1\|2336119_2337508_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	3.3e-153	59.2
WP_032608737.1\|2337579_2337996_-	hypothetical protein	NA	NA	NA	NA
WP_063612943.1\|2338030_2339029_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	2.1e-112	68.4
WP_032608735.1\|2338955_2340413_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	9.8e-156	60.4
WP_032608733.1\|2340441_2342004_-\|terminase	terminase	G8C7P3	Escherichia_phage	8.8e-304	93.2
WP_032608731.1\|2342000_2342651_-	hypothetical protein	G8C7P2	Escherichia_phage	9.2e-114	99.5
WP_003859853.1\|2342870_2343101_-	hypothetical protein	NA	NA	NA	NA
WP_032608726.1\|2343696_2344215_-	Rha family transcriptional regulator	Q38450	Enterobacteria_phage	2.1e-92	98.3
WP_044596275.1\|2344511_2344898_-	DUF2570 domain-containing protein	A0A2H4FNE5	Salmonella_phage	5.5e-05	44.0
WP_032608725.1\|2344894_2345335_-	lysozyme	A0A0M4R365	Salmonella_phage	4.4e-51	71.1
WP_001514184.1\|2345338_2345614_-\|holin	phage holin family protein	S4TNV9	Salmonella_phage	5.8e-09	41.0
WP_032608724.1\|2345610_2346012_-	membrane protein	NA	NA	NA	NA
WP_032608723.1\|2346288_2346978_-	antiterminator	I6PDF8	Cronobacter_phage	1.5e-53	48.9
WP_032608722.1\|2347087_2347723_-	Lambda NinG family protein	M9NYX8	Enterobacteria_phage	1.1e-92	85.4
WP_032608721.1\|2347715_2347886_-	NinE family protein	K7P7K0	Enterobacteria_phage	2.4e-21	92.9
WP_032608720.1\|2347885_2348341_-	hypothetical protein	K7P7B8	Enterobacteria_phage	2.9e-53	66.9
WP_032608719.1\|2349443_2349629_-	hypothetical protein	K7P7P5	Enterobacteria_phage	1.6e-26	91.8
WP_032608717.1\|2349625_2350060_-	hypothetical protein	A0A0A6Z565	Enterobacter_phage	1.4e-09	40.5
WP_059555724.1\|2350056_2350371_-	hypothetical protein	I6PDF7	Cronobacter_phage	9.2e-11	42.3
WP_032608716.1\|2350360_2351734_-	replicative DNA helicase	E5AGF0	Erwinia_phage	4.9e-165	62.7
WP_032608714.1\|2351730_2352816_-	replication protein	E5AGE9	Erwinia_phage	2.3e-85	45.6
WP_013095956.1\|2352802_2352970_-	hypothetical protein	Q76H53	Enterobacteria_phage	2.1e-14	78.2
WP_001514165.1\|2353058_2353625_-	hypothetical protein	NA	NA	NA	NA
WP_016042179.1\|2353654_2353882_-	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	4.1e-37	100.0
WP_016042178.1\|2353992_2354682_+	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	2.2e-126	100.0
WP_032608710.1\|2354897_2355143_+	type II toxin-antitoxin system HicA family toxin	K7PH44	Enterobacterial_phage	4.4e-16	50.0
WP_032608708.1\|2355139_2355598_+	type II toxin-antitoxin system HicB family antitoxin	K7PJX6	Enterobacterial_phage	1.8e-39	49.3
WP_032608707.1\|2355594_2356020_+	hypothetical protein	NA	NA	NA	NA
WP_025760147.1\|2356137_2356494_+	hypothetical protein	G0ZNF1	Cronobacter_phage	7.7e-54	90.7
WP_032608706.1\|2356652_2356850_-	hypothetical protein	G8C7T7	Escherichia_phage	1.0e-23	92.2
WP_042862569.1\|2357356_2357830_-	hypothetical protein	NA	NA	NA	NA
WP_044596295.1\|2358171_2358366_+	hypothetical protein	NA	NA	NA	NA
WP_023294196.1\|2358362_2358521_+	hypothetical protein	G8C7T3	Escherichia_phage	5.8e-22	96.2
WP_000607101.1\|2358517_2358727_+	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	3.9e-34	97.1
WP_032608703.1\|2358799_2359084_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.9e-47	92.6
WP_032608701.1\|2359102_2359948_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	4.5e-68	55.4
WP_032608700.1\|2359944_2360625_+	YqaJ viral recombinase family protein	M9NZE1	Enterobacteria_phage	6.9e-128	95.1
WP_032608699.1\|2360621_2361050_+	hypothetical protein	M9NYX4	Enterobacteria_phage	1.5e-72	95.1
WP_164088318.1\|2361046_2361214_+	hypothetical protein	G8C7S7	Escherichia_phage	5.6e-23	92.7
WP_032608698.1\|2361210_2361762_+	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.2e-55	58.3
WP_032608697.1\|2361758_2361977_+	hypothetical protein	NA	NA	NA	NA
WP_127341288.1\|2361973_2362174_+	hypothetical protein	NA	NA	NA	NA
WP_032608692.1\|2362452_2362671_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	4.6e-17	63.9
WP_032608691.1\|2362670_2362982_+	DUF2591 family protein	E5AGF4	Erwinia_phage	1.0e-14	47.4
WP_032608690.1\|2362959_2363199_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	2.8e-28	74.4
WP_032608689.1\|2363207_2363438_+	hypothetical protein	G8C7S3	Escherichia_phage	5.7e-34	94.7
WP_071886183.1\|2363543_2363879_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025756108.1\|2363755_2364919_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	1.4e-229	99.5
2373879:2373895	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3119659 : 3221448

uncultured_Caudovirales_phage(32.0%)

integrase,protease,transposase

attL 3180828:3180842|attR 3216186:3216200

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000090707.1\|3119659_3120502_+\|transposase	transposase	NA	NA	NA	NA
WP_000351437.1\|3120488_3122612_+\|transposase	transposase	NA	NA	NA	NA
WP_001049180.1\|3122611_3124060_+	ATP-binding protein	NA	NA	NA	NA
WP_001324699.1\|3124100_3125657_+\|transposase	transposase	NA	NA	NA	NA
WP_000262420.1\|3125668_3126595_+	hypothetical protein	NA	NA	NA	NA
WP_001097216.1\|3126947_3127247_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001239419.1\|3127810_3129637_+	AAA family ATPase	NA	NA	NA	NA
WP_000647571.1\|3129805_3130156_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	8.1e-16	61.4
WP_000790485.1\|3130302_3130734_-	silver-binding protein SilE	NA	NA	NA	NA
WP_001377740.1\|3130978_3132460_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.8e-27	30.1
WP_000697968.1\|3132452_3133133_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.7e-31	36.0
WP_000475506.1\|3133322_3134708_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246155.1\|3134735_3135089_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_000157620.1\|3135202_3136495_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_075155265.1\|3136505_3139700_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	NA	NA
WP_075155266.1\|3142754_3142985_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_001023257.1\|3144043_3144493_-	copper resistance protein	NA	NA	NA	NA
WP_001378117.1\|3144727_3146545_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_001242438.1\|3146544_3147441_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000025662.1\|3147480_3147861_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_000998778.1\|3147865_3148795_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_001188930.1\|3148849_3149530_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_001211180.1\|3149526_3150927_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	3.2e-18	26.6
WP_000723069.1\|3151144_3151579_+	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
WP_032608336.1\|3152073_3153693_-	DNA-binding domain-containing protein	NA	NA	NA	NA
WP_032608335.1\|3153759_3155268_-	AAA family ATPase	A0A075DXT4	Acinetobacter_phage	4.1e-48	30.5
WP_032608334.1\|3155670_3157449_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_032608332.1\|3159337_3160021_-	SAM-dependent DNA methyltransferase	A0A2K9V411	Faecalibacterium_phage	2.3e-30	38.6
WP_032608331.1\|3160129_3161062_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_032608328.1\|3161167_3162154_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.7e-50	40.7
WP_029591441.1\|3162235_3162583_-	hypothetical protein	NA	NA	NA	NA
WP_032608327.1\|3162650_3163253_-	DUF3085 domain-containing protein	NA	NA	NA	NA
WP_032608326.1\|3163328_3163976_-	hypothetical protein	NA	NA	NA	NA
WP_032608325.1\|3164062_3164428_-	hypothetical protein	NA	NA	NA	NA
WP_032608323.1\|3164535_3164898_-	hypothetical protein	NA	NA	NA	NA
WP_154598151.1\|3164890_3165259_-	hypothetical protein	NA	NA	NA	NA
WP_000427623.1\|3165986_3166991_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_032608321.1\|3167069_3167504_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294663.1\|3167575_3167926_+	mercuric transport protein MerT	NA	NA	NA	NA
WP_011405607.1\|3167939_3168215_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_011405608.1\|3168402_3170112_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.3e-34	27.1
WP_011405609.1\|3170147_3170801_+	phenylmercury resistance protein MerG	NA	NA	NA	NA
WP_011405610.1\|3170881_3171520_+	organomercurial lyase MerB	NA	NA	NA	NA
WP_021443905.1\|3171516_3171864_+	mercuric resistance transcriptional repressor protein MerD	NA	NA	NA	NA
WP_087920843.1\|3171954_3172158_-	hypothetical protein	NA	NA	NA	NA
WP_004118541.1\|3172175_3175184_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	62.8
WP_004118540.1\|3175344_3175902_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	8.4e-39	47.2
WP_004118538.1\|3176033_3176366_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_011977829.1\|3176719_3177868_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.7e-123	65.9
WP_004118534.1\|3178142_3178517_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	4.5e-28	56.0
WP_001549953.1\|3179045_3180242_+	MFS transporter	NA	NA	NA	NA
WP_004118529.1\|3180313_3181141_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	4.9e-51	42.3
3180828:3180842	attL	NA	NA	NA	NA
WP_001549885.1\|3181159_3182638_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.6e-198	74.0
WP_001549886.1\|3183121_3183475_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	5.9e-22	57.1
WP_001549887.1\|3183570_3184854_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.9e-175	74.6
WP_001549888.1\|3184903_3185332_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	70.7
WP_025801347.1\|3185389_3186103_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	5.1e-97	73.4
WP_001549890.1\|3186108_3186441_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000427614.1\|3187309_3188314_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_002718009.1\|3190153_3190714_-	hypothetical protein	NA	NA	NA	NA
WP_032608318.1\|3190895_3191864_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.2e-45	36.9
WP_003465043.1\|3193081_3193438_+	cupin domain-containing protein	NA	NA	NA	NA
WP_003100858.1\|3193692_3194019_+	hypothetical protein	NA	NA	NA	NA
WP_074422537.1\|3194054_3194231_+\|integrase	integrase	NA	NA	NA	NA
WP_000427623.1\|3194412_3195417_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_000429838.1\|3195516_3195951_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294667.1\|3196022_3196373_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_000735441.1\|3196388_3196664_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_000654684.1\|3196666_3196912_+	mercury resistance system transport protein MerF	NA	NA	NA	NA
WP_000136268.1\|3196908_3198555_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-39	28.3
WP_003465059.1\|3198571_3198937_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_001087809.1\|3198933_3199170_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000904941.1\|3199222_3199837_-	recombinase family protein	A0A0C4UR34	Shigella_phage	1.3e-37	51.9
WP_000801210.1\|3199897_3201115_-	TniQ family protein	NA	NA	NA	NA
WP_000393453.1\|3201111_3202020_-	AAA family ATPase	NA	NA	NA	NA
WP_010791757.1\|3202022_3203705_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_032608310.1\|3203900_3204518_+	recombinase family protein	NA	NA	NA	NA
WP_006786007.1\|3204584_3205484_-\|integrase	integrase	NA	NA	NA	NA
WP_048859499.1\|3206453_3207125_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_071886162.1\|3207187_3207682_-	hypothetical protein	NA	NA	NA	NA
WP_028016388.1\|3208063_3209032_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_029591133.1\|3210382_3211654_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	8.1e-146	60.5
WP_077791480.1\|3211656_3212172_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	9.2e-32	49.6
WP_004115509.1\|3212372_3212774_+	hypothetical protein	NA	NA	NA	NA
WP_029593071.1\|3212798_3214322_-	conjugal transfer protein TraG	NA	NA	NA	NA
WP_004115513.1\|3214324_3214663_-	hypothetical protein	NA	NA	NA	NA
WP_032608305.1\|3216147_3217140_-	TIGR03756 family integrating conjugative element protein	NA	NA	NA	NA
3216186:3216200	attR	NA	NA	NA	NA
WP_032608304.1\|3217136_3217535_-	TIGR03757 family integrating conjugative element protein	NA	NA	NA	NA
WP_071886161.1\|3217743_3218598_+	FRG domain-containing protein	NA	NA	NA	NA
WP_087744867.1\|3218631_3219751_+\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	3.9e-51	42.8
WP_127341290.1\|3220000_3220294_+	hypothetical protein	NA	NA	NA	NA
WP_032608300.1\|3220503_3221448_+\|protease	CAAX amino protease	NA	NA	NA	NA

DBSCAN-SWA_7

4350867 : 4391159

Salmonella_phage(80.49%)

portal,plate,integrase,tail,lysis,tRNA,capsid,terminase,head

attL 4345849:4345879|attR 4396851:4396881

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4345849:4345879	attL	NA	NA	NA	NA
WP_032607942.1\|4350867_4352427_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	7.4e-08	31.5
WP_003862595.1\|4352423_4352918_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_032607938.1\|4353063_4353828_+	siderophore-interacting protein	NA	NA	NA	NA
WP_003862593.1\|4353828_4354998_-	DNA repair ATPase	NA	NA	NA	NA
WP_032610576.1\|4355375_4356389_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	4.8e-117	60.2
WP_114143818.1\|4356398_4357304_-	NAD-dependent DNA ligase	NA	NA	NA	NA
WP_032610574.1\|4357309_4357924_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.2e-38	41.4
WP_015386350.1\|4358025_4358262_+	hypothetical protein	NA	NA	NA	NA
WP_015386351.1\|4358296_4358806_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.0e-83	93.5
WP_015386352.1\|4358813_4359014_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	8.7e-31	90.9
WP_032610572.1\|4358977_4359319_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.5e-51	85.8
WP_032610571.1\|4359386_4359620_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	2.1e-23	79.2
WP_032610570.1\|4359619_4359847_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.5e-34	92.0
WP_032610569.1\|4359843_4360695_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.8e-118	72.3
WP_032610567.1\|4360691_4363085_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	91.4
WP_032610566.1\|4363246_4363435_+	hypothetical protein	A0A1S6L006	Salmonella_phage	5.7e-24	91.9
WP_001217561.1\|4363447_4363681_+	DinI family protein	A0A1S6L014	Salmonella_phage	2.2e-33	92.2
WP_057979947.1\|4363858_4364065_+	hypothetical protein	NA	NA	NA	NA
WP_032610563.1\|4364152_4365202_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.4e-156	79.5
WP_032610561.1\|4365201_4366965_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	6.5e-312	87.5
WP_032610559.1\|4367114_4367942_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	1.3e-72	64.3
WP_014884904.1\|4367957_4369106_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.2e-132	68.8
WP_006777754.1\|4369109_4369763_+\|terminase	Small terminase subunit	E5G6M7	Salmonella_phage	5.2e-56	56.1
WP_014884903.1\|4369861_4370329_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.3e-48	58.7
WP_000868184.1\|4370328_4370532_+\|tail	tail protein X	E5G6M9	Salmonella_phage	3.8e-34	100.0
WP_014884902.1\|4370535_4370751_+	hypothetical protein	E5G6N0	Salmonella_phage	2.0e-20	66.2
WP_032610558.1\|4370731_4371247_+	lysozyme	E5G6N1	Salmonella_phage	3.1e-72	76.5
WP_032610557.1\|4371243_4371672_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	1.4e-57	85.7
WP_014884898.1\|4371767_4372199_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	3.5e-69	89.5
WP_014884897.1\|4372191_4372638_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.4e-60	81.1
WP_014884896.1\|4372706_4373285_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	8.2e-106	96.9
WP_039264785.1\|4373281_4373641_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	1.5e-52	89.0
WP_032610589.1\|4373627_4374536_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	8.0e-148	92.4
WP_032610588.1\|4374528_4375134_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	5.2e-111	93.5
WP_032610586.1\|4375130_4376867_+\|tail	tail fiber protein	M1TAS6	Escherichia_phage	3.3e-142	70.5
WP_032610585.1\|4376866_4377265_+\|tail	phage tail fiber protein	K7PMC4	Enterobacterial_phage	2.4e-19	50.0
WP_032610584.1\|4377397_4378570_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.6e-209	93.1
WP_007848874.1\|4378579_4379095_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	7.6e-87	93.0
WP_007848877.1\|4379149_4379452_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	3.7e-41	91.0
WP_007848878.1\|4379466_4379586_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	3.3e-14	92.3
WP_032610582.1\|4379578_4383022_+\|tail	phage tail tape measure protein	A0A1S6L010	Salmonella_phage	0.0e+00	72.4
WP_032610580.1\|4383021_4383507_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	3.0e-69	90.1
WP_032610578.1\|4383503_4384604_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	5.5e-183	92.6
WP_015386379.1\|4384673_4384892_+	DNA-binding transcriptional regulator	Q53ZE7	Salmonella_virus	1.6e-25	72.2
WP_032607936.1\|4385228_4385735_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_006812010.1\|4385835_4387680_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_003862574.1\|4387832_4389578_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.4e-76	39.0
WP_001144069.1\|4389693_4389909_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_032607934.1\|4390145_4391159_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.3e-109	58.9
4396851:4396881	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018815

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP018814

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection