CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP016406	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 chromosome, complete genome	3 crisprs	PD-DExK,csa3,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,DEDDh	0	31	8	0
NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	0 crisprs	cas3,c2c9_V-U4,DEDDh,csa3	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP016406_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016406_1

1223300-1224916

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

26 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP016406_1

>merge|NZ_CP016406|1|1223300-1224916|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTCGTACACCAGCGCTTTACCGGAGTGTCCGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGATCAAATATCAGATAACCCCCGTCGGCAAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGATCACATTCCTGAAAAATGACTCCCTTAGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAGATATTGAAAGCGCCCAATCTTCCCAGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCAGCATTGACGCGAACCCTGCGCCGCTGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTGAAATATTGCTATTTCCGAAGGGGCTGATGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCCGCCTGAACAAAATCGACCACGTTATTAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTCCCGCGGGCGCTCCTGTTGGCCAGCATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCCAATACGAGCTGAGTGCGCACGCCCTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGATCGACCGCCTGGAGGTTGAGGTGGTTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTGGATTGATTCTGATCGCCGTGGGCGGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAAACAGAGATCGCGTCCGATAATGCCGACATGTGTTCCCCGCGCCAGCGGGGATAAACCGAGAATATTCAACTCCAGCGGGAAAAAGACGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACTTTCATCAAACTGGATCGAAGGGCCACTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGTTTTAGCTCGCTGGAAACCTCGCTTTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGACGCCGAGGGTGAATATTTAGACCGGGACGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGATCATCAATGTGGGAAGTTATCACAACGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAAATTCAGCGTCTGGAATGCAAGGATTTTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTATATCCCCGAATCGTGCGCTACGTGAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGACGAGGTCATTTTCAGCACTCGTCAGGCGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGATGCCCTGTTCGGCAAAATCCCGCCACGCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAAACCGGTGCTGGATTTTGATGAAGACGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATTCAACATCGCACTTAAGAACTTGTGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATATTTATCCAGACTGTCGGACAGGGTGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTCATCGGGAGCCAACGCCGCGAGAATACGCGTGTTCCCCGCGCCAGCGGGGATAAACCCAGCACAATCATTATTAGATGAACTTTCATCAAGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP016406|1|1|1223300-1224855|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTACACCAGCGCTTTACCGGAGTGTCCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCAAATATCAGATAACCCCCGTCGGCAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCACATTCCTGAAAAATGACTCCCTTAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGATATTGAAAGCGCCCAATCTTCCCAGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCAGCATTGACGCGAACCCTGCGCCGCTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAAATATTGCTATTTCCGAAGGGGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCGCCTGAACAAAATCGACCACGTTATTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCCCGCGGGCGCTCCTGTTGGCCAGCATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCTGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGACCGCCTGGAGGTTGAGGTGGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGGATTGATTCTGATCGCCGTGGGCGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAACAGAGATCGCGTCCGATAATGCCGACAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATATTCAACTCCAGCGGGAAAAAGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTTCATCAAACTGGATCGAAGGGCCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTTTAGCTCGCTGGAAACCTCGCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCGAGGGTGAATATTTAGACCGGGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCATCAATGTGGGAAGTTATCACAACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAAATTCAGCGTCTGGAATGCAAGGATTTTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTATATCCCCGAATCGTGCGCTACGTGAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAGGTCATTTTCAGCACTCGTCAGGCGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCCCTGTTCGGCAAAATCCCGCCACGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAACCGGTGCTGGATTTTGATGAAGACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTCAACATCGCACTTAAGAACTTGTGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTTATCCAGACTGTCGGACAGGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCATCGGGAGCCAACGCCGCGAGAATACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC

>NZ_CP016406|1|1|1223300-1224916|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTACACCAGCGCTTTACCGGAGTGTCCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCAAATATCAGATAACCCCCGTCGGCAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCACATTCCTGAAAAATGACTCCCTTAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGATATTGAAAGCGCCCAATCTTCCCAGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCAGCATTGACGCGAACCCTGCGCCGCTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAAATATTGCTATTTCCGAAGGGGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCGCCTGAACAAAATCGACCACGTTATTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCCCGCGGGCGCTCCTGTTGGCCAGCATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCTGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGACCGCCTGGAGGTTGAGGTGGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGGATTGATTCTGATCGCCGTGGGCGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAACAGAGATCGCGTCCGATAATGCCGACAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATATTCAACTCCAGCGGGAAAAAGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTTCATCAAACTGGATCGAAGGGCCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTTTAGCTCGCTGGAAACCTCGCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCGAGGGTGAATATTTAGACCGGGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCATCAATGTGGGAAGTTATCACAACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAAATTCAGCGTCTGGAATGCAAGGATTTTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTATATCCCCGAATCGTGCGCTACGTGAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAGGTCATTTTCAGCACTCGTCAGGCGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCCCTGTTCGGCAAAATCCCGCCACGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAACCGGTGCTGGATTTTGATGAAGACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTCAACATCGCACTTAAGAACTTGTGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTTATCCAGACTGTCGGACAGGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCATCGGGAGCCAACGCCGCGAGAATACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCAA
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP016406|1|1|1223300-1224916|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTACACCAGCGCTTTACCGGAGTGTCCGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCAAATATCAGATAACCCCCGTCGGCAAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCACATTCCTGAAAAATGACTCCCTTAGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAGATATTGAAAGCGCCCAATCTTCCCAGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCAGCATTGACGCGAACCCTGCGCCGCTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTGAAATATTGCTATTTCCGAAGGGGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCCGCCTGAACAAAATCGACCACGTTATTAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCCCGCGGGCGCTCCTGTTGGCCAGCATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCAATACGAGCTGAGTGCGCACGCCCTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGATCGACCGCCTGGAGGTTGAGGTGGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGGATTGATTCTGATCGCCGTGGGCGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAAACAGAGATCGCGTCCGATAATGCCGACAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATATTCAACTCCAGCGGGAAAAAGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTTCATCAAACTGGATCGAAGGGCCACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTTTAGCTCGCTGGAAACCTCGCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCGAGGGTGAATATTTAGACCGGGACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATCATCAATGTGGGAAGTTATCACAACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAAATTCAGCGTCTGGAATGCAAGGATTTTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTATATCCCCGAATCGTGCGCTACGTGAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGAGGTCATTTTCAGCACTCGTCAGGCGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCCCTGTTCGGCAAAATCCCGCCACGCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAACCGGTGCTGGATTTTGATGAAGACGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTCAACATCGCACTTAAGAACTTGTGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTTATCCAGACTGTCGGACAGGGTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCATCGGGAGCCAACGCCGCGAGAATACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCAA
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016406.1\|WP_000046853.1\|1213095_1214391_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP016406.1\|WP_058649956.1\|1226684_1228484_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP016406.1\|WP_023993973.1\|1217082_1217379_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP016406.1\|WP_000706477.1\|1209095_1210238_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP016406.1\|WP_023993659.1\|1225013_1225811_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP016406.1\|WP_000210863.1\|1219177_1220815_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP016406.1\|WP_001199961.1\|1222331_1223003_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP016406.1\|WP_000108313.1\|1225898_1226261_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP016406.1\|WP_000117946.1\|1236869_1237430_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP016406.1\|WP_000210449.1\|1218149_1218950_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP016406.1\|WP_000368584.1\|1235316_1236873_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP016406.1\|WP_000186399.1\|1210281_1213038_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP016406.1\|WP_000039870.1\|1230297_1231032_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP016406.1\|WP_023993663.1\|1232641_1235305_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP016406.1\|WP_023993664.1\|1237443_1238502_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP016406.1\|WP_023993662.1\|1231244_1232198_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP016406.1\|WP_000480218.1\|1216760_1217117_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP016406.1\|WP_000036734.1\|1220897_1222196_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP016406.1\|WP_000226841.1\|1214442_1216677_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP016406.1\|WP_023993661.1\|1228483_1230196_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402

Protein	Function_ID	Function_description	E-value
NZ_CP016406.1\|WP_000046853.1\|1213095_1214391_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP016406.1\|WP_058649956.1\|1226684_1228484_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP016406.1\|WP_023993973.1\|1217082_1217379_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	2.05732e-13
NZ_CP016406.1\|WP_000706477.1\|1209095_1210238_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP016406.1\|WP_023993659.1\|1225013_1225811_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	7.09684e-101
NZ_CP016406.1\|WP_000210863.1\|1219177_1220815_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP016406.1\|WP_001199961.1\|1222331_1223003_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP016406.1\|WP_000108313.1\|1225898_1226261_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP016406.1\|WP_000117946.1\|1236869_1237430_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP016406.1\|WP_000210449.1\|1218149_1218950_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP016406.1\|WP_000368584.1\|1235316_1236873_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP016406.1\|WP_000186399.1\|1210281_1213038_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP016406.1\|WP_000039870.1\|1230297_1231032_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
NZ_CP016406.1\|WP_023993663.1\|1232641_1235305_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP016406.1\|WP_023993664.1\|1237443_1238502_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.4012e-132
NZ_CP016406.1\|WP_023993662.1\|1231244_1232198_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP016406.1\|WP_000480218.1\|1216760_1217117_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP016406.1\|WP_000036734.1\|1220897_1222196_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP016406.1\|WP_000226841.1\|1214442_1216677_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP016406.1\|WP_023993661.1\|1228483_1230196_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0

>NZ_CP016406.1|WP_001199961.1|1222331_1223003_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP016406.1|WP_000036734.1|1220897_1222196_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP016406.1|WP_000210863.1|1219177_1220815_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP016406.1|WP_000210449.1|1218149_1218950_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP016406.1|WP_023993973.1|1217082_1217379_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRLELGEYIYALPFERHIIYFIQSVTEVIVIRILSQHQDSGKHVNWL
>NZ_CP016406.1|WP_000480218.1|1216760_1217117_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP016406.1|WP_000226841.1|1214442_1216677_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP016406.1|WP_000046853.1|1213095_1214391_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVQALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP016406.1|WP_000186399.1|1210281_1213038_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP016406.1|WP_000706477.1|1209095_1210238_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP016406.1|WP_023993659.1|1225013_1225811_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDMSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLDITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTMWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP016406.1|WP_000108313.1|1225898_1226261_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP016406.1|WP_058649956.1|1226684_1228484_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGSVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRVRAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP016406.1|WP_023993661.1|1228483_1230196_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLLLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKVKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAELGLVGKAPGRYNVHLGGNRMGTRIPRMYRENITESEILDSVDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP016406.1|WP_000039870.1|1230297_1231032_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP016406.1|WP_023993662.1|1231244_1232198_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYMLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP016406.1|WP_023993663.1|1232641_1235305_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP016406.1|WP_000368584.1|1235316_1236873_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP016406.1|WP_000117946.1|1236869_1237430_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP016406.1|WP_023993664.1|1237443_1238502_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA

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Crispr_ID: NZ_CP016406_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016406_2

1241198-1243094

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCNAGCGGGGATAAACCG	CRT

30 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP016406_2

>merge|NZ_CP016406|2|1241198-1243094|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGAATACCACTATATAAAGCCCCTCAACCCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTTACAAAAACTGGCCCCCTGAATTCATCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATTTTAATGGCGGGCGAATTGTATTTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTCCTGTAACATTCCGATATATAATTCTCCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCCAATTGCCGGCGACGGTTTCCATGTCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCGAAACAGGCCAGAGAACGCGAATTGCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTGTTCGATGTAGGTTTCTTCCTGAAGGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTACCAGGCCCGTTTGTCTCAACCATGACCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGGCATGGCTGGCGACGTAGCGAACAAAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGCATAAATTACTCGATGCGTACCTGTGAAATCTGTGTTCCCCGCGCCAGCGGGGATAAACCGATACAGTAGCAAAATAAAAAGGCCGCGTGAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATGCCGTTTTGCCCGAGTTTTCACCGCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCTATTGCCGGGGGTCGAGATGGCCGCCTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGATCCGCGCCTATGACGCAATGGTAACGACGTGTTCCCCGCGCCAGCGGGGATAAACCTGTAGCGCAGGGACTGGCAACGGTGCCGGGCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGAGACGGCCAGCCGCACCGGTGGCGGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGTTTTATTCGACCTGAAAAAATGGATCGTGTGTTCCCCGCGCTAGCGGGGATAAACCGACATCTCGCGGACAATAGCGATTTCCACCGTCGTGTTCCCCGCGCTAGCGGGGATAAACCGCGTTTCGTTCATTTATTTAGTTTCCTGTTTCGGTGTTCCCCGCGCTAGCGGGGATAAACCCCTTGTTAAATACAGGCGGCGGCGGGGTTGGTGTTCCCCGCGCTAGCGGGGATAAACCGAACGGCGACGGGATCGTTTTTTGTGGCGAAAAGTGTTCCCCGCGCTAGCGGGGATAAACCGCAGGATTGGATTAATGAAGACGGGTACGAAATGTGTTCCCCGCGCTAGCGGGGATAAACCGAGATTGCAGAATTATATTTCACGCTGGCAGCAGTGTTCCCCGCGCTAGCGGGGATAAACCGCTGTTGTTATGCGTTGGATCGTAATAGTTAACGTGTTCCCCGCGCTAGCGGGGATAAACCGCTTGGCAGGGCTGCGCCGCAATGGCAGCAACAGTGTTCCCCGCGCTAGCGGGGATAAACCGGTCTTATAAATTGGGCTGATAGTGCCGCTGATGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCTGCCGGGACTGGAGTGCAGGTAACCCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCCAGCCATTTAAACAGCGCTGCAGCGGGGATAAACCGACAGGGTATATGAGCTTATACGTCATGAACCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGTTGGTGGCGTTCGTCACCTGGCTGTCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP016406|2|2|1241198-1243033|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAATACCACTATATAAAGCCCCTCAACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTACAAAAACTGGCCCCCTGAATTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTCCTGTAACATTCCGATATATAATTCTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCCAATTGCCGGCGACGGTTTCCATGTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCGAAACAGGCCAGAGAACGCGAATTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCGATGTAGGTTTCTTCCTGAAGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACCAGGCCCGTTTGTCTCAACCATGACCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGGCATGGCTGGCGACGTAGCGAACAAAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAAATTACTCGATGCGTACCTGTGAAATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATACAGTAGCAAAATAAAAAGGCCGCGTGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATGCCGTTTTGCCCGAGTTTTCACCGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTATTGCCGGGGGTCGAGATGGCCGCCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATCCGCGCCTATGACGCAATGGTAACGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTAGCGCAGGGACTGGCAACGGTGCCGGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGACGGCCAGCCGCACCGGTGGCGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTTTTATTCGACCTGAAAAAATGGATCGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACATCTCGCGGACAATAGCGATTTCCACCGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTTTCGTTCATTTATTTAGTTTCCTGTTTCG
GTGTTCCCCGCGCTAGCGGGGATAAACCC	CTTGTTAAATACAGGCGGCGGCGGGGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AACGGCGACGGGATCGTTTTTTGTGGCGAAAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGATTGGATTAATGAAGACGGGTACGAAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGATTGCAGAATTATATTTCACGCTGGCAGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGTTGTTATGCGTTGGATCGTAATAGTTAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTTGGCAGGGCTGCGCCGCAATGGCAGCAACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCTTATAAATTGGGCTGATAGTGCCGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTGCCGGGACTGGAGTGCAGGTAACCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCAGCCATTTAAACAGCGCTG
CAGCGGGGATAAACCGACAGGGTATATGA	GCTTATACGTCATGAACCAGTGTTCCCCGCGC
CAGCGGGGATAAACCGTCGTTGGTGGCGT	TCGTCACCTGGCTGTCGGTGTGTTCCCCGCGC
CAGCGGGGATAAACCG

>NZ_CP016406|2|2|1241198-1243094|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAATACCACTATATAAAGCCCCTCAACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTACAAAAACTGGCCCCCTGAATTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTCCTGTAACATTCCGATATATAATTCTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCCAATTGCCGGCGACGGTTTCCATGTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCGAAACAGGCCAGAGAACGCGAATTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCGATGTAGGTTTCTTCCTGAAGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACCAGGCCCGTTTGTCTCAACCATGACCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGGCATGGCTGGCGACGTAGCGAACAAAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAAATTACTCGATGCGTACCTGTGAAATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATACAGTAGCAAAATAAAAAGGCCGCGTGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATGCCGTTTTGCCCGAGTTTTCACCGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTATTGCCGGGGGTCGAGATGGCCGCCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATCCGCGCCTATGACGCAATGGTAACGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTAGCGCAGGGACTGGCAACGGTGCCGGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGACGGCCAGCCGCACCGGTGGCGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTTTTATTCGACCTGAAAAAATGGATCGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACATCTCGCGGACAATAGCGATTTCCACCGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTTTCGTTCATTTATTTAGTTTCCTGTTTCG
GTGTTCCCCGCGCTAGCGGGGATAAACCC	CTTGTTAAATACAGGCGGCGGCGGGGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AACGGCGACGGGATCGTTTTTTGTGGCGAAAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGATTGGATTAATGAAGACGGGTACGAAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGATTGCAGAATTATATTTCACGCTGGCAGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGTTGTTATGCGTTGGATCGTAATAGTTAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTTGGCAGGGCTGCGCCGCAATGGCAGCAACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCTTATAAATTGGGCTGATAGTGCCGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTGCCGGGACTGGAGTGCAGGTAACCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCCAGCCATTTAAACAGCGCTGCAGCGGGGATAAACCGACAGGGTATATGAGCTTATACGTCATGAACCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGTTGGTGGCGTTCGTCACCTGGCTGTCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGTCAGCGGGGATAAACAC

>NZ_CP016406|2|2|1241198-1242871|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGAATACCACTATATAAAGCCCCTCAACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTACAAAAACTGGCCCCCTGAATTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTTAATGGCGGGCGAATTGTATTTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTCCTGTAACATTCCGATATATAATTCTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCCAATTGCCGGCGACGGTTTCCATGTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCGAAACAGGCCAGAGAACGCGAATTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCGATGTAGGTTTCTTCCTGAAGGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTACCAGGCCCGTTTGTCTCAACCATGACCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGGCATGGCTGGCGACGTAGCGAACAAAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAAATTACTCGATGCGTACCTGTGAAATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATACAGTAGCAAAATAAAAAGGCCGCGTGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATGCCGTTTTGCCCGAGTTTTCACCGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTATTGCCGGGGGTCGAGATGGCCGCCTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATCCGCGCCTATGACGCAATGGTAACGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GTAGCGCAGGGACTGGCAACGGTGCCGGGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGACGGCCAGCCGCACCGGTGGCGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGTTTTATTCGACCTGAAAAAATGGATCGT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACATCTCGCGGACAATAGCGATTTCCACCGTC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CGTTTCGTTCATTTATTTAGTTTCCTGTTTCG
GTGTTCCCCGCGCTAGCGGGGATAAACCC	CTTGTTAAATACAGGCGGCGGCGGGGTTG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AACGGCGACGGGATCGTTTTTTGTGGCGAAAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CAGGATTGGATTAATGAAGACGGGTACGAAAT
GTGTTCCCCGCGCTAGCGGGGATAAACCG	AGATTGCAGAATTATATTTCACGCTGGCAGCA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTGTTGTTATGCGTTGGATCGTAATAGTTAAC
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CTTGGCAGGGCTGCGCCGCAATGGCAGCAACA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GTCTTATAAATTGGGCTGATAGTGCCGCTGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCTGCCGGGACTGGAGTGCAGGTAACCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016406.1\|WP_001219244.1\|1248958_1249438_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP016406.1\|WP_023993663.1\|1232641_1235305_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP016406.1\|WP_001173659.1\|1246749_1247355_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP016406.1\|WP_000372384.1\|1244405_1245314_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP016406.1\|WP_000039870.1\|1230297_1231032_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP016406.1\|WP_023993662.1\|1231244_1232198_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP016406.1\|WP_023993665.1\|1238512_1239259_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP016406.1\|WP_000117946.1\|1236869_1237430_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP016406.1\|WP_001518648.1\|1240807_1241101_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP016406.1\|WP_000134246.1\|1249434_1250484_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP016406.1\|WP_000741649.1\|1248248_1248959_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP016406.1\|WP_023993669.1\|1245323_1246763_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP016406.1\|WP_000517480.1\|1247918_1248230_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP016406.1\|WP_023993664.1\|1237443_1238502_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP016406.1\|WP_023993671.1\|1250464_1251226_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP016406.1\|WP_000144837.1\|1239887_1240808_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP016406.1\|WP_023993668.1\|1243108_1244155_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP016406.1\|WP_000253545.1\|1251219_1251846_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NZ_CP016406.1\|WP_000368584.1\|1235316_1236873_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP016406.1\|WP_023993666.1\|1239240_1239891_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869

Protein	Function_ID	Function_description	E-value
NZ_CP016406.1\|WP_001219244.1\|1248958_1249438_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP016406.1\|WP_023993663.1\|1232641_1235305_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP016406.1\|WP_001173659.1\|1246749_1247355_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	3.2499e-145
NZ_CP016406.1\|WP_000372384.1\|1244405_1245314_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP016406.1\|WP_000039870.1\|1230297_1231032_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
NZ_CP016406.1\|WP_023993662.1\|1231244_1232198_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP016406.1\|WP_023993665.1\|1238512_1239259_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	6.534e-48
NZ_CP016406.1\|WP_000117946.1\|1236869_1237430_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP016406.1\|WP_001518648.1\|1240807_1241101_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP016406.1\|WP_000134246.1\|1249434_1250484_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP016406.1\|WP_000741649.1\|1248248_1248959_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP016406.1\|WP_023993669.1\|1245323_1246763_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP016406.1\|WP_000517480.1\|1247918_1248230_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP016406.1\|WP_023993664.1\|1237443_1238502_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.4012e-132
NZ_CP016406.1\|WP_023993671.1\|1250464_1251226_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.66927e-145
NZ_CP016406.1\|WP_000144837.1\|1239887_1240808_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	7.95508e-157
NZ_CP016406.1\|WP_023993668.1\|1243108_1244155_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP016406.1\|WP_000253545.1\|1251219_1251846_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	7.37904e-129
NZ_CP016406.1\|WP_000368584.1\|1235316_1236873_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP016406.1\|WP_023993666.1\|1239240_1239891_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	2.31556e-75

>NZ_CP016406.1|WP_001518648.1|1240807_1241101_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP016406.1|WP_000144837.1|1239887_1240808_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLINKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIKPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP016406.1|WP_023993666.1|1239240_1239891_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRREKSRQMIQFSSVDYTGVLVINDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP016406.1|WP_023993665.1|1238512_1239259_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQEPWLRKEDACISQE
>NZ_CP016406.1|WP_023993664.1|1237443_1238502_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP016406.1|WP_000117946.1|1236869_1237430_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP016406.1|WP_000368584.1|1235316_1236873_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP016406.1|WP_023993663.1|1232641_1235305_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPDSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP016406.1|WP_023993662.1|1231244_1232198_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYMLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNIEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP016406.1|WP_000039870.1|1230297_1231032_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP016406.1|WP_023993668.1|1243108_1244155_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQASSPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP016406.1|WP_000372384.1|1244405_1245314_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP016406.1|WP_023993669.1|1245323_1246763_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYCEETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLVPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPLVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP016406.1|WP_001173659.1|1246749_1247355_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP016406.1|WP_000517480.1|1247918_1248230_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP016406.1|WP_000741649.1|1248248_1248959_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP016406.1|WP_001219244.1|1248958_1249438_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP016406.1|WP_000134246.1|1249434_1250484_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP016406.1|WP_023993671.1|1250464_1251226_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNILYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP016406.1|WP_000253545.1|1251219_1251846_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MVSGRVQALLEQLRAQGIRDEQVLNALAAVPREKFIDEAFEHKAWENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCSVERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMAQLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVKGELA

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Crispr_ID: NZ_CP016406_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP016406_3

3329258-3329365

Orphan

Consensus_repeat	Method
TGTTCATCGGATGGTTTATCGCATGGTTCATCGGGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP016406_3

>merge|NZ_CP016406|3|3329258-3329365|CRISPRCasFinder
TGTTCATCGGATGGTTTATCGCATGGTTCATCGGGTGAATGCTTCAAAGCCGCGCCATTGCTGGGTTTGTTGTTATCGGATGGTTTATCGCATGGTTCATCGGGTGAA

>NZ_CP016406|3|3|3329258-3329365|CRISPRCasFinder
TGTTCATCGGATGGTTTATCGCATGGTTCATCGGGTGAA	TGCTTCAAAGCCGCGCCATTGCTGGGTTTG
TTGTTATCGGATGGTTTATCGCATGGTTCATCGGGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP016406.1\|WP_023233618.1\|3333480_3333843_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016406.1\|WP_001185533.1\|3324560_3325031_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|293995
NZ_CP016406.1\|WP_000843522.1\|3333859_3334303_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016406.1\|WP_000759585.1\|3331737_3332757_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP016406.1\|WP_000924596.1\|3325409_3325811_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016406.1\|WP_023233617.1\|3334391_3335024_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP016406.1\|WP_001180316.1\|3330486_3330714_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379154
NZ_CP016406.1\|WP_023993437.1\|3327137_3327410_-\|DUF4752-family-protein	unknown	unknown	gnl\|CDD\|339554
NZ_CP016406.1\|WP_023167630.1\|3327481_3328858_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273206
NZ_CP016406.1\|WP_000950998.1\|3325240_3325417_-\|protein-ninF	unknown	unknown	gnl\|CDD\|283468
NZ_CP016406.1\|WP_001291852.1\|3326422_3326623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016406.1\|WP_000834179.1\|3332903_3333113_-\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP016406.1\|WP_000250476.1\|3330791_3331502_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP016406.1\|WP_023993436.1\|3326625_3326907_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016406.1\|WP_023167632.1\|3329777_3330038_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016406.1\|WP_000141641.1\|3335232_3335391_+\|protease-FtsH-inhibitory-lysogeny-factor-CIII	unknown	unknown	gnl\|CDD\|280268
NZ_CP016406.1\|WP_001089627.1\|3325011_3325248_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP016406.1\|WP_023993435.1\|3325997_3326420_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182057
NZ_CP016406.1\|WP_001254236.1\|3325813_3325990_-\|NinE-family-protein	unknown	unknown	gnl\|CDD\|283078
NZ_CP016406.1\|WP_000424139.1\|3330059_3330350_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083

Protein	Function_ID	Function_description	E-value
NZ_CP016406.1\|WP_001185533.1\|3324560_3325031_-\|hypothetical-protein	gnl\|CDD\|293995	cd15823, SPRY_PRY_TRIM6, PRY/SPRY domain in tripartite motif-binding protein 6 (TRIM6), also known as RING finger protein 89 (RNF89). This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of TRIM6, also known as RING finger protein 89 (RNF89). TRIM6 domain is composed of RING/B-box/coiled-coil core and also known as RBCC protein. It is selectively expressed in embryonic stem (ES) cells and interacts with the proto-oncogene product Myc, maintaining the pluripotency of the ES cells. TRIM6, together with E2 Ubiquitin conjugase (UbE2K) and K48-linked poly-Ub chains, is critical for the IkappaB kinase epsilon (IKKepsilon) branch of type I interferon (IFN-I) signaling pathway and subsequent establishment of a protective antiviral response.	0.00705203
NZ_CP016406.1\|WP_000759585.1\|3331737_3332757_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.79777e-15
NZ_CP016406.1\|WP_000424139.1\|3330059_3330350_-\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	1.11972e-07
NZ_CP016406.1\|WP_023233617.1\|3334391_3335024_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	5.61623e-07
NZ_CP016406.1\|WP_000250476.1\|3330791_3331502_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	6.91053e-27
NZ_CP016406.1\|WP_000950998.1\|3325240_3325417_-\|protein-ninF	gnl\|CDD\|283468	pfam05810, NinF, NinF protein. This family consists of several bacteriophage NinF proteins as well as related sequences from E. coli.	6.33036e-19
NZ_CP016406.1\|WP_023167630.1\|3327481_3328858_-\|AAA-family-ATPase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	1.67747e-112
NZ_CP016406.1\|WP_023993437.1\|3327137_3327410_-\|DUF4752-family-protein	gnl\|CDD\|339554	pfam15944, DUF4752, Domain of unknown function (DUF4752). This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 90 and 105 amino acids in length. There is a conserved GLA sequence motif.	6.80413e-30
NZ_CP016406.1\|WP_000834179.1\|3332903_3333113_-\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.61111e-29
NZ_CP016406.1\|WP_001180316.1\|3330486_3330714_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379154	pfam13384, HTH_23, Homeodomain-like domain.	7.57366e-05
NZ_CP016406.1\|WP_023993435.1\|3325997_3326420_-\|hypothetical-protein	gnl\|CDD\|182057	PRK09741, PRK09741, hypothetical protein; Provisional.	1.59287e-73
NZ_CP016406.1\|WP_000141641.1\|3335232_3335391_+\|protease-FtsH-inhibitory-lysogeny-factor-CIII	gnl\|CDD\|280268	pfam02061, Lambda_CIII, Lambda Phage CIII. The CIII protein from bacteriophage lambda is an inhibitor of the FtsH peptidase.	3.84366e-16
NZ_CP016406.1\|WP_001254236.1\|3325813_3325990_-\|NinE-family-protein	gnl\|CDD\|283078	pfam05322, NinE, NINE Protein. This family consists of NINE proteins from several bacteriophages and from E. coli.	2.90141e-24

>NZ_CP016406.1|WP_023167630.1|3327481_3328858_-|AAA-family-ATPase
MRQDIEASVIGGLLIGGLTPTASDVLATLEPEAFSIPLYRKAFEVIRKQARNRNMIDGLMVAEECGDEYATAVMMTARSCPSAANLKGYAGMVADSYQRRQVLQLLDEMREPISNGTLDASGSAMDELVKRLSAIRKPRNEVKPVRLGEIINDYTDTLDRRLRNGEESDTLKTGIEELDAITGGMNAEDLVIIAARPGMGKTELALKIAEGVASRVIPGSDVRRGVLIFSMEMSAIQVVERGIAGAGMMSVSVLRNPSRMDDEGWARVASGMKLLADLDVWVVDASRLSVEEIRSIAERHKQEHPNLSLIMADYLGLIEKPKAERNDLAIAHISGSLKAMAKDLKTPVISLSQLSRDVEKRPNKRPTNADLRDSGSIEQDADSIIMLYREAVYDENSSAAPFAEIIVTKNRFGSLGTVYQRFCNGHFVGCDQNEARQICTASNAPAGRRKRYAQGADV
>NZ_CP016406.1|WP_023993437.1|3327137_3327410_-|DUF4752-family-protein
MKDLLVTLNVGLSLLGYAYIMFKTGQWIITKALKQWDKRRKVSAKQKAVDALYEAYELDKVSEGDTVKVATKEGLLIMICRHEKTNTIAR
>NZ_CP016406.1|WP_023993436.1|3326625_3326907_-|hypothetical-protein
MDESRKQFESVIGGKGWFIQKTDSGSYVHERVHLMWMAWRESRAAIEIELPAKNDISSDDYPIPDLVDWDDGRNAGIQECAEAIRAAGIKVKE
>NZ_CP016406.1|WP_001291852.1|3326422_3326623_-|hypothetical-protein
MSEKTVTLTRRQFRHLCDALINTVNMGQQFMAISTDGSEMSDKAFYQAQLLRQAIERQLKVATDGR
>NZ_CP016406.1|WP_023993435.1|3325997_3326420_-|hypothetical-protein
MQEFILHETNKSQFWLVLKQILSTGKRWHIKISEYREKRSLPQNSLMWKWNTEIADQLSATGVDRFTDEEVHEWLKDMYCPATPVTVFGMTRYVKSTRQLDIGEMHKYLTDIDQWAHQKGLRLTIPDNCEYLDLKRRQEE
>NZ_CP016406.1|WP_001254236.1|3325813_3325990_-|NinE-family-protein
MRRQRRSITDIICENCKYLPTKRSRNKPKPAPNESDVKTFNYTAHLWDIRWLRYRARK
>NZ_CP016406.1|WP_000924596.1|3325409_3325811_-|hypothetical-protein
MLLIQPGFGLSIKKGHMFGEKESQRKMVSIRLPFISIYWLNREATNYWYTCARAAFNDPDWFIENHHAVRQAKRKSTITKMKAYRDAWEEHRNRYQKDIEKLESENTELKRRLGEAKRDIDAYKRLVGGDSHA
>NZ_CP016406.1|WP_000950998.1|3325240_3325417_-|protein-ninF
MLSPTQIMQYQKESVDRALTCANCGQKLHVLEVHVCEHCCAELMSDPNSSMHEEEDDE
>NZ_CP016406.1|WP_001089627.1|3325011_3325248_-|hypothetical-protein
MNSVKPYSPREQDYIRRVAGKVPAEVMAAALGRTRNSLVNWANRHGISLRVPYGILKKHWPEYAEKMTKGGRNGAKER
>NZ_CP016406.1|WP_001185533.1|3324560_3325031_-|hypothetical-protein
MALKRDKFDDVFSQLVRERTDWICDYCGRTFHHERQKLHCSHFKSRRHKATRYHPYNAFAHCIGCHRKLEEDPYEFTAHAEIVYGEMTIERVARLACIPVRLKPWQMDEIYQHMKSELKRLQELRAHGVTGRIDFTLPDWYQDGIQLRMGESQCAA
>NZ_CP016406.1|WP_023167632.1|3329777_3330038_-|hypothetical-protein
MRKNTEMHKEVKRNRFLQSIDSKTAMTFSSVAKFELMKSEAKALLKDLPVENGYTFIPNSFLERLLKQEFSVDQFSEILKVFREGR
>NZ_CP016406.1|WP_000424139.1|3330059_3330350_-|hypothetical-protein
MELTNHSKKIREVETELRARLVSMGQTNFAKMAGWSDSKVSRLNIQDMAVTFVLLEKVWETSLIREVARQAVEAVMPRNKKRPAATERSEQIQMDF
>NZ_CP016406.1|WP_001180316.1|3330486_3330714_-|helix-turn-helix-domain-containing-protein
MQNLDEPIKGIGIPEVARACGVSERAVYKWLKNGFLPKTEFFGKTRYASKIEEISGGKFQAVDLLEISKKNLLSA
>NZ_CP016406.1|WP_000250476.1|3330791_3331502_+|helix-turn-helix-transcriptional-regulator
MVQNEKVRQEFAQRLAQACKEAGLDEHGRGIAIARALDVSSKGVSKWFNAESLPRQEKMNALANFLKVDVVWLQHGSVRQSTTTDPQSLTFVGQLRKGLVRVVGEAILGVDGAIEMTEERDGWLKIYSDDPEAFGLRVKGDSMWPRIKSGEYVLIEPNTKVCPGDEVFVRTIEGHNMIKVLGYDRDGEYQFTSINQDHRPITLPYYEVSKVEYVAGILKQSRHLDDIEAREWLRNN
>NZ_CP016406.1|WP_000759585.1|3331737_3332757_+|ParA-family-protein
MKKYAIWNNKGGTGKTSLSFQAICRYAEIHPLERVLVIDVCPQANLSELFLGGLIGNGSINLLTRHDINNRCTLGGYFQMRLPTPYQKPIFDAHDYLTHPKKFNEHIPANISLICGDPLLELQANAINTLANQQIPGTNAWVSIIDWINDLIKDLNDEYDVLFIDCNPSFSIYTQIALAAVEKLILPVMADDSSRRAIQNAFSLIYGLKLPSDIYASYAFANKLTMVSRPLPKVHMIAKNRLTQYMGPASAYAAVLKSIDNDIQQLLLSNPEIFDFENVEEGVVNIKDFQTTGVVAFAKGCPFSILPTGSVRVMNRRVKVNAPYKQSCLEAIDKMVVKL
>NZ_CP016406.1|WP_000834179.1|3332903_3333113_-|fumarate-hydratase-FumD
MKSEELAQLRYQEMCRIVGDVVFAMVAEGHETKRVAIADVIRTEIAKGLDKWDDDQLQCMKLAVKLLEE
>NZ_CP016406.1|WP_023233618.1|3333480_3333843_+|hypothetical-protein
MTRRTAFNGSAAGRRRERRAALQNETTASSEVLHRPTLSRVQIQAKGKHETPKRIEDAKSLQFMAKDAFWQLEEYRRHLERAAIVYANEFGHKPAETGVCLPDVAIYNAGYRGAKYVTAR
>NZ_CP016406.1|WP_000843522.1|3333859_3334303_+|hypothetical-protein
MKSTVSYTAMRVKQYGGVPSVEVQCIDSRTKIKSDCLILFKTLDEVIFLGAENLHPLIKAEMRQCALNALQEGKGKLQIEAKQTLTELESSRKRQANRARQFHDAIAGWSRELLSLNVDIQRGLDTPTIRSRIGTLAESMEKLKPKK
>NZ_CP016406.1|WP_023233617.1|3334391_3335024_+|hypothetical-protein
MTKEIVTFKGFNKDLKCRGFQFAIGETFHHDGKVEACGSGFHACECPFDVFSYYPPAESRYAETISFGITDSEEGGDTKIASSSITIKDELTLPQFIQRGIEWIWSKIDKSLEQQIISGNWSAATNTGKRSAATNTGNRSAAEVSGSQSVAASLGIEGKARASEGGAIVLCYRDEDGELIHIRASKVGENGIMPDTWYQLDEDGEFVECE
>NZ_CP016406.1|WP_000141641.1|3335232_3335391_+|protease-FtsH-inhibitory-lysogeny-factor-CIII
MTFAIAGGAVMGIAQLNESLLERITRKLRAGWKRLGEILNQPGVPRHDHYAC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP016406_1	1.13\|1224062\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224062-1224093	32	NZ_CP039495	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence	16537-16568	0	1.0
NZ_CP016406_1	1.13\|1224062\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224062-1224093	32	KC139516	Salmonella phage FSL SP-016, partial genome	44540-44571	0	1.0
NZ_CP016406_1	1.13\|1224062\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224062-1224093	32	NC_042346	Salmonella virus BTP1 genome assembly, chromosome: BTP1	23602-23633	0	1.0
NZ_CP016406_1	1.13\|1224062\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224062-1224093	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	45442-45473	1	0.969
NZ_CP016406_1	1.13\|1224062\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224062-1224093	32	CP051275	Salmonella phage SW-37, complete genome	22992-23023	1	0.969
NZ_CP016406_2	2.23\|1242567\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242567-1242598	32	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	44895-44926	3	0.906
NZ_CP016406_1	1.17\|1224306\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224306-1224337	32	NZ_LN554848	Aliivibrio wodanis genome assembly AWOD1, plasmid : pAWOD920	55242-55273	5	0.844
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	MN098327	Klebsiella phage Mulock, complete genome	34232-34261	5	0.833
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	KY271395	Klebsiella phage 2b LV-2017, complete genome	11683-11712	5	0.833
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	KY271396	Klebsiella phage 2 LV-2017, complete genome	33331-33360	5	0.833
NZ_CP016406_2	2.11\|1241838\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241838-1241869	32	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	178636-178667	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_KT307967	Yersinia pseudotuberculosis strain IP2666 plasmid pYV2666, complete sequence	3657-3688	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_010157	Yersinia pestis Angola plasmid new_pCD, complete sequence	52733-52764	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_006153	Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete sequence	3655-3686	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_005813	Yersinia pestis biovar Microtus str. 91001 plasmid pCD1, complete sequence	5726-5757	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009491	Yersinia pestis strain PBM19 plasmid pCD1, complete sequence	22794-22825	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_010635	Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01, complete sequence	18045-18076	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009758	Yersinia pseudotuberculosis strain EP2/+ plasmid pCD, complete sequence	29230-29261	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009779	Yersinia pseudotuberculosis PB1/+ plasmid pYAB, complete sequence	30995-31026	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009711	Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_1, complete sequence	33462-33493	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009713	Yersinia pestis Pestoides F plasmid pCD, complete sequence	8420-8451	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009703	Yersinia pestis strain Harbin35 plasmid unnamed2, complete sequence	53711-53742	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009783	Yersinia pestis strain El Dorado plasmid pCD, complete sequence	41473-41504	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009721	Yersinia pestis strain Shasta plasmid pCD, complete sequence	15954-15985	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP045260	Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pCD, complete sequence	2016-2047	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP033695	Yersinia pestis strain FDAARGOS_602 plasmid unnamed2, complete sequence	32080-32111	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_009377	Yersinia pestis Pestoides F plasmid CD, complete sequence	3737-3768	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_014017	Yersinia pestis Z176003 plasmid pCD1, complete sequence	53160-53191	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_017263	Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pCD, complete sequence	53373-53404	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP033697	Yersinia pestis strain FDAARGOS_601 plasmid unnamed1, complete sequence	67337-67368	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP033712	Yersinia pseudotuberculosis strain FDAARGOS_581 plasmid unnamed, complete sequence	52835-52866	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP033714	Yersinia pseudotuberculosis strain FDAARGOS_580 plasmid unnamed, complete sequence	1810-1841	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP032567	Yersinia pseudotuberculosis strain IP2666pIB1 plasmid pIB1, complete sequence	3657-3688	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP033708	Yersinia pseudotuberculosis strain FDAARGOS_583 plasmid unnamed, complete sequence	8879-8910	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP045147	Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pCD, complete sequence	2016-2047	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP045156	Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pCD, complete sequence	2016-2047	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP045160	Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pCD, complete sequence	2016-2047	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP006747	Yersinia pestis 8787 plasmid pCD1, complete sequence	29547-29578	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009972	Yersinia pestis CO92 plasmid unnamed, complete sequence	21695-21726	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_003131	Yersinia pestis CO92 plasmid pCD1, complete sequence	55118-55149	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP045151	Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pCD, complete sequence	2016-2047	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP006791	Yersinia pestis 2944 plasmid pCD, complete sequence	25332-25363	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP006750	Yersinia pestis 3770 plasmid pCD1, complete sequence	63914-63945	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP006757	Yersinia pestis 1522 plasmid pCD, complete sequence	16846-16877	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_LT596222	Yersinia pseudotuberculosis isolate NZYP4713 plasmid 2	2004-2035	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP033710	Yersinia pseudotuberculosis strain FDAARGOS_582 plasmid unnamed, complete sequence	41051-41082	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_017157	Yersinia pestis D182038 plasmid pCD1, complete sequence	54483-54514	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_017153	Yersinia pestis D106004 plasmid pCD1, complete sequence	53160-53191	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP033716	Yersinia pseudotuberculosis strain FDAARGOS_579 plasmid unnamed, complete sequence	33032-33063	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_004839	Yersinia pestis strain KIM5 plasmid pCD1, complete sequence	3737-3768	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP033689	Yersinia pestis strain FDAARGOS_603 plasmid unnamed1, complete sequence	36155-36186	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP006761	Yersinia pestis 1413 plasmid pCD, complete sequence	34564-34595	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP006780	Yersinia pestis 1412 plasmid pCD, complete sequence	17614-17645	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP006753	Yersinia pestis 3067 plasmid pCD1, complete sequence	17769-17800	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP016274	Yersinia pestis strain Cadman plasmid pCD1, complete sequence	26932-26963	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP019710	Yersinia pestis strain 195/P plasmid pCD1, complete sequence	9952-9983	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009905	Yersinia pestis Antiqua plasmid pCD, complete sequence	21643-21674	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009990	Yersinia pestis strain Nicholisk 41 plasmid 2, complete sequence	51092-51123	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009937	Yersinia pestis Angola plasmid pCD, complete sequence	11000-11031	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP009842	Yersinia pestis strain Dodson plasmid pCD, complete sequence	61073-61104	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP010069	Yersinia pseudotuberculosis str. PA3606 plasmid unnamed1, complete sequence	58463-58494	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP010246	Yersinia pestis Pestoides G plasmid pCD, complete sequence	47330-47361	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP010022	Yersinia pestis str. Pestoides B plasmid pCD, complete sequence	28027-28058	6	0.812
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NC_015056	Yersinia pestis Java 9 plasmid pCD, complete sequence	76315-76346	6	0.812
NZ_CP016406_2	2.20\|1242387\|29\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242387-1242415	29	NZ_CP010957	Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence	225651-225679	6	0.793
NZ_CP016406_2	2.20\|1242387\|29\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242387-1242415	29	AP013537	Uncultured Mediterranean phage uvMED DNA, complete genome, group G6, isolate: uvMED-CGR-C59A-MedDCM-OCT-S34-C49	24370-24398	6	0.793
NZ_CP016406_2	2.20\|1242387\|29\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242387-1242415	29	AP014007	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C59A-MedDCM-OCT-S29-C45, * SEQUENCING IN PROGRESS *	26235-26263	6	0.793
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	NZ_CP033726	Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence	43935-43966	6	0.812
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	NZ_CP033726	Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence	43935-43966	6	0.812
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP047230	Moraxella osloensis strain YV1 plasmid p4, complete sequence	5721-5750	6	0.8
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	13190-13219	6	0.8
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NC_008771	Verminephrobacter eiseniae EF01-2 plasmid pVEIS01, complete sequence	26884-26913	6	0.8
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_KX364409	Aeromonas salmonicida subsp. salmonicida strain M16474-11 plasmid pAsa8, complete sequence	44288-44317	6	0.8
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	12970-12999	6	0.8
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	284684-284713	6	0.8
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	12975-13004	6	0.8
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	12979-13008	6	0.8
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	12978-13007	6	0.8
NZ_CP016406_1	1.8\|1223757\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223757-1223788	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3403299-3403330	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP044974	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) plasmid pPBL-H3_B4-2, complete sequence	75250-75281	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP053984	Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence	8273-8304	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP015373	Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence	23025-23056	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP026268	Aminobacter sp. MSH1 plasmid pBAM1, complete sequence	23153-23184	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_010935	Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence	9729-9760	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_017908	Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence	41202-41233	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	549233-549264	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JX469834	Uncultured bacterium plasmid pDS3, complete sequence	38822-38853	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JX469828	Uncultured bacterium plasmid pRSB223, complete sequence	6551-6582	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JX469831	Uncultured bacterium plasmid pKSP212, complete sequence	45664-45695	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP044977	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-2, complete sequence	77800-77831	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JN106171	Uncultured bacterium plasmid pAKD26, complete sequence	71417-71448	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JN106172	Uncultured bacterium plasmid pAKD29, complete sequence	38666-38697	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JN106173	Uncultured bacterium plasmid pAKD31, complete sequence	39847-39878	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JN106174	Uncultured bacterium plasmid pAKD33, complete sequence	39847-39878	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JN106165	Uncultured bacterium plasmid pAKD14, complete sequence	39844-39875	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JN106166	Uncultured bacterium plasmid pAKD15, complete sequence	39844-39875	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JN106168	Uncultured bacterium plasmid pAKD17, complete sequence	39844-39875	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	JN106169	Uncultured bacterium plasmid pAKD18, complete sequence	39829-39860	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP044551	Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence	62497-62528	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_016968	Comamonas testosteroni plasmid pTB30, complete sequence	76964-76995	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_016978	Comamonas testosteroni plasmid pI2, complete sequence	66272-66303	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP017760	Cupriavidus necator strain NH9 plasmid pENH91, complete sequence	20743-20774	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP053554	Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence	19175-19206	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	KF743817	Proteus mirabilis plasmid R772, complete sequence	38759-38790	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	KF743818	Bordetella bronchiseptica plasmid R906, complete sequence	40977-41008	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP038640	Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence	74199-74230	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_019263	Delftia acidovorans plasmid pLME1, complete sequence	75102-75133	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_019264	Delftia acidovorans plasmid pNB8c, complete sequence	58096-58127	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_019283	Delftia acidovorans plasmid pC1-1, complete sequence	71953-71984	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_019320	Variovorax sp. DB1 plasmid pDB1, complete sequence	8004-8035	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_LR594664	Variovorax sp. RA8 plasmid 3	307956-307987	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_021077	Comamonas sp. 7D-2 plasmid pBHB, complete sequence	80572-80603	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_007337	Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence	8004-8035	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_LR594677	Variovorax sp. PBS-H4 plasmid 3	91682-91713	7	0.781
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NC_006830	Achromobacter xylosoxidans A8 plasmid pA81, complete sequence	78675-78706	7	0.781
NZ_CP016406_1	1.24\|1224734\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224734-1224765	32	NZ_CP014690	Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence	221609-221640	7	0.781
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	4747-4778	7	0.781
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	389262-389293	7	0.781
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	AP014010	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, * SEQUENCING IN PROGRESS *	33568-33599	7	0.781
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	834462-834493	7	0.781
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	652620-652651	7	0.781
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	666481-666512	7	0.781
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	591710-591741	7	0.781
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021819	Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence	492570-492601	7	0.781
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	1326784-1326815	7	0.781
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	235632-235663	7	0.781
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP011866	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence	4507-4536	7	0.767
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP011866	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence	9665-9694	7	0.767
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP011866	Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence	14816-14845	7	0.767
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NC_019298	Rahnella sp. WMR121 plasmid pHW121, complete sequence	1909-1938	7	0.767
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NC_011667	Thauera sp. MZ1T plasmid pTha01, complete sequence	77731-77760	7	0.767
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NC_012209	Yersinia enterocolitica plasmid pYe4449-2, complete sequence	14304-14333	7	0.767
NZ_CP016406_1	1.5\|1223574\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223574-1223605	32	NZ_CP028919	Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence	34712-34743	8	0.75
NZ_CP016406_1	1.8\|1223757\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223757-1223788	32	NZ_LT984809	Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence	272071-272102	8	0.75
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP040989	Vibrio furnissii strain FDAARGOS_777 plasmid unnamed1, complete sequence	23089-23120	8	0.75
NZ_CP016406_1	1.11\|1223940\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223940-1223971	32	NZ_CP035511	Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence	188876-188907	8	0.75
NZ_CP016406_1	1.15\|1224184\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224184-1224215	32	NZ_CP042333	Bosea sp. F3-2 plasmid pB32-2, complete sequence	28489-28520	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP024200	Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence	508622-508653	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	938103-938134	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	1142696-1142727	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	1515253-1515284	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	544308-544339	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1138201-1138232	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	1084795-1084826	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	1048974-1049005	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	1239699-1239730	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	1224396-1224427	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	808919-808950	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	771861-771892	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	936442-936473	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NC_016585	Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence	840415-840446	8	0.75
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	KC292024	Halovirus HHTV-2, complete genome	51651-51682	8	0.75
NZ_CP016406_2	2.25\|1242689\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242689-1242720	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	411938-411969	8	0.75
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	463868-463899	8	0.75
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	NC_021304	Streptomyces phage Sujidade, complete genome	1599-1630	8	0.75
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	MG663585	Streptomyces phage ToriToki, complete genome	15079-15110	8	0.75
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	MK112550	Streptomyces phage Olicious, complete genome	15086-15117	8	0.75
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	MG663582	Streptomyces phage HaugeAnator, complete genome	15086-15117	8	0.75
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	MG663586	Streptomyces phage ZooBear, complete genome	15086-15117	8	0.75
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	NC_048686	Streptomyces phage Immanuel3, complete genome	15090-15121	8	0.75
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	MG663584	Streptomyces phage Romero, complete genome	15079-15110	8	0.75
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	463868-463899	8	0.75
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	NC_021304	Streptomyces phage Sujidade, complete genome	1599-1630	8	0.75
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	MG663585	Streptomyces phage ToriToki, complete genome	15079-15110	8	0.75
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	MK112550	Streptomyces phage Olicious, complete genome	15086-15117	8	0.75
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	MG663582	Streptomyces phage HaugeAnator, complete genome	15086-15117	8	0.75
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	MG663586	Streptomyces phage ZooBear, complete genome	15086-15117	8	0.75
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	NC_048686	Streptomyces phage Immanuel3, complete genome	15090-15121	8	0.75
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	MG663584	Streptomyces phage Romero, complete genome	15079-15110	8	0.75
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP038104	Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pAsa9-like, complete sequence	58151-58180	8	0.733
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_KY555070	Aeromonas salmonicida subsp. salmonicida strain 01-B526 plasmid pAsa9, complete sequence	57943-57972	8	0.733
NZ_CP016406_1	1.1\|1223329\|33\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223329-1223361	33	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	991009-991041	9	0.727
NZ_CP016406_1	1.5\|1223574\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223574-1223605	32	NC_049851	Burkholderia phage BcepSauron, complete genome	40328-40359	9	0.719
NZ_CP016406_1	1.5\|1223574\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223574-1223605	32	NC_049850	Burkholderia phage BcepSaruman, complete genome	39621-39652	9	0.719
NZ_CP016406_1	1.10\|1223879\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223879-1223910	32	NZ_CP044073	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence	88620-88651	9	0.719
NZ_CP016406_1	1.11\|1223940\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223940-1223971	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	760675-760706	9	0.719
NZ_CP016406_1	1.18\|1224367\|33\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224367-1224399	33	NZ_CP030128	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed2, complete sequence	337150-337182	9	0.727
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP025882	Escherichia coli strain 503440 plasmid p503440_52, complete sequence	21245-21276	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP025895	Escherichia coli strain 503025 plasmid p503025_52, complete sequence	49736-49767	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP025867	Escherichia coli strain 504211 plasmid p504211_50, complete sequence	49975-50006	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP025980	Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence	137273-137304	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP025871	Escherichia coli strain 503829 plasmid p503829_52, complete sequence	8728-8759	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP054369	Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence	142880-142911	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP006000	Escherichia coli B7A plasmid pEB2, complete sequence	28176-28207	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP012377	Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence	101019-101050	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP050647	Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence	101888-101919	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	63594-63625	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP010126	Escherichia coli strain C8 plasmid A, complete genome	65388-65419	9	0.719
NZ_CP016406_2	2.6\|1241533\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241533-1241564	32	NZ_CP031323	Escherichia coli strain ST2350 isolate Es_ST2350_SE1_NDM_03_2018 plasmid pEsST2350_SE_2, complete sequence	27432-27463	9	0.719
NZ_CP016406_2	2.9\|1241716\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241716-1241747	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	436590-436621	9	0.719
NZ_CP016406_2	2.9\|1241716\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241716-1241747	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	610630-610661	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP009975	Pseudomonas putida S12 plasmid pTTS12, complete sequence	84729-84760	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP039989	Pseudomonas aeruginosa strain T2436 plasmid pBT2436, complete sequence	145047-145078	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP039991	Pseudomonas aeruginosa strain T2101 plasmid pBT2101, complete sequence	145256-145287	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP045917	Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence	148548-148579	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	MF344571	Pseudomonas aeruginosa plasmid pR31014-IMP, complete sequence	148330-148361	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	MF344568	Pseudomonas aeruginosa plasmid p727-IMP, complete sequence	151010-151041	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	MF344569	Pseudomonas aeruginosa plasmid p12939-PER, complete sequence	147600-147631	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	MF344570	Pseudomonas aeruginosa plasmid pA681-IMP, complete sequence	150756-150787	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP039294	Pseudomonas aeruginosa strain PABL048 plasmid pPABL048, complete sequence	392902-392933	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	CP027478	Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence	223040-223071	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP040126	Pseudomonas aeruginosa strain PA298 plasmid pBM908, complete sequence	84333-84364	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP015879	Pseudomonas citronellolis strain SJTE-3 plasmid pRBL16, complete sequence	78216-78247	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP016215	Pseudomonas aeruginosa strain PA121617 plasmid pBM413, complete sequence	156756-156787	9	0.719
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_KY883660	Pseudomonas putida strain SY153 plasmid pSY153-MDR, complete sequence	154605-154636	9	0.719
NZ_CP016406_2	2.12\|1241899\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241899-1241930	32	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	86590-86621	9	0.719
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP044424	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence	48814-48845	9	0.719
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	KT381276	Mycobacterium phage Serenity, complete genome	13746-13777	9	0.719
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	77981-78012	9	0.719
NZ_CP016406_2	2.18\|1242265\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242265-1242296	32	AP014927	Ralstonia phage RSF1 DNA, complete genome	117193-117224	9	0.719
NZ_CP016406_2	2.22\|1242506\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242506-1242537	32	LR877331	Klebsiella phage vB_KpnM_311F genome assembly, chromosome: 1	58865-58896	9	0.719
NZ_CP016406_2	2.22\|1242506\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242506-1242537	32	MN434095	Klebsiella pneumoniae phage JIPh_Kp122, complete genome	157694-157725	9	0.719
NZ_CP016406_2	2.22\|1242506\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242506-1242537	32	KY000080	Klebsiella phage KPV15, complete genome	11451-11482	9	0.719
NZ_CP016406_2	2.22\|1242506\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242506-1242537	32	NC_028686	Klebsiella phage JD18, complete genome	157483-157514	9	0.719
NZ_CP016406_2	2.22\|1242506\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242506-1242537	32	MK421971	Klebsiella phage vB_KpnM_GF, partial genome	152891-152922	9	0.719
NZ_CP016406_2	2.27\|1242811\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242811-1242842	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1282116-1282147	9	0.719
NZ_CP016406_2	2.27\|1242811\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242811-1242842	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	983836-983867	9	0.719
NZ_CP016406_2	2.27\|1242811\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242811-1242842	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1282272-1282303	9	0.719
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	341970-342001	9	0.719
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	321406-321437	9	0.719
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	NC_011368	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence	341970-342001	9	0.719
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	321406-321437	9	0.719
NZ_CP016406_3	3.1\|3329297\|30\|NZ_CP016406\|CRISPRCasFinder	3329297-3329326	30	NZ_CP014310	Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence	203476-203505	9	0.7
NZ_CP016406_1	1.11\|1223940\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223940-1223971	32	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	102029-102060	10	0.688
NZ_CP016406_1	1.11\|1223940\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223940-1223971	32	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	251833-251864	10	0.688
NZ_CP016406_1	1.11\|1223940\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223940-1223971	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	286129-286160	10	0.688
NZ_CP016406_1	1.11\|1223940\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1223940-1223971	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	442068-442099	10	0.688
NZ_CP016406_1	1.21\|1224551\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224551-1224582	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	613341-613372	10	0.688
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	78355-78386	10	0.688
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	72031-72062	10	0.688
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	3413-3444	10	0.688
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	232722-232753	10	0.688
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	129890-129921	10	0.688
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	109941-109972	10	0.688
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	148697-148728	10	0.688
NZ_CP016406_1	1.26\|1224856\|32\|NZ_CP016406\|CRISPRCasFinder,CRT	1224856-1224887	32	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	3413-3444	10	0.688
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_KY494864	Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence	91265-91296	10	0.688
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_LT969519	Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 1	116070-116101	10	0.688
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_MN433457	Pseudomonas aeruginosa strain PAB546 plasmid pNK546-KPC, complete sequence	200841-200872	10	0.688
NZ_CP016406_2	2.10\|1241777\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241777-1241808	32	NZ_CP045003	Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence	478203-478234	10	0.688
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	MG962370	Mycobacterium phage Kykar, complete genome	13914-13945	10	0.688
NZ_CP016406_2	2.13\|1241960\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241960-1241991	32	MK359312	Mycobacterium phage Fushigi, complete genome	14740-14771	10	0.688
NZ_CP016406_2	2.14\|1242021\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242021-1242052	32	NZ_CP019603	Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence	84615-84646	10	0.688
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP018080	Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence	170081-170112	10	0.688
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	NZ_CP020568	Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence	149487-149518	10	0.688
NZ_CP016406_2	2.16\|1242143\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242143-1242174	32	MH727593	Acidovorax phage ACPWH, complete genome	37920-37951	10	0.688
NZ_CP016406_2	2.30\|1242986\|32\|NZ_CP016406\|PILER-CR	1242986-1243017	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	774630-774661	10	0.688
NZ_CP016406_2	2.32\|1242973\|32\|NZ_CP016406\|CRISPRCasFinder	1242973-1243004	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	774630-774661	10	0.688
NZ_CP016406_2	2.33\|1243034\|32\|NZ_CP016406\|CRISPRCasFinder	1243034-1243065	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP016406_2	2.33\|1243034\|32\|NZ_CP016406\|CRISPRCasFinder	1243034-1243065	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NZ_CP016406_1	1.13\|1224062\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1224062-1224093	32	NC_010683	Ralstonia pickettii 12J plasmid pRPIC01, complete sequence	22365-22396	11	0.656
NZ_CP016406_2	2.5\|1241472\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1241472-1241503	32	KU963249	Gordonia phage Yeezy, complete genome	46010-46041	11	0.656
NZ_CP016406_2	2.22\|1242506\|32\|NZ_CP016406\|PILER-CR,CRISPRCasFinder,CRT	1242506-1242537	32	MH729874	Klebsiella phage KP179, complete genome	150763-150794	11	0.656

1. spacer 1.13|1224062|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 0, identity: 1.0

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatattcaactccagcgggaaaaagacgca	Protospacer
********************************

2. spacer 1.13|1224062|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 0, identity: 1.0

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatattcaactccagcgggaaaaagacgca	Protospacer
********************************

3. spacer 1.13|1224062|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 0, identity: 1.0

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatattcaactccagcgggaaaaagacgca	Protospacer
********************************

4. spacer 1.13|1224062|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 1, identity: 0.969

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatactcaactccagcgggaaaaagacgca	Protospacer
******.*************************

5. spacer 1.13|1224062|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
agaatcttcaactccagcgggaaaaagacgca	Protospacer
***** **************************

6. spacer 2.23|1242567|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

agattgcagaattatatttcacgctggcagca	CRISPR spacer
agcttgcagaattatatttcacactggcagcg	Protospacer
** *******************.********.

7. spacer 1.17|1224306|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN554848 (Aliivibrio wodanis genome assembly AWOD1, plasmid : pAWOD920) position: , mismatch: 5, identity: 0.844

-ggatcatcaatgtgggaagttatcacaacgga	CRISPR spacer
gggattatt-atgtgggaagttattactacgga	Protospacer
 ****.**. **************.** *****

8. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to MN098327 (Klebsiella phage Mulock, complete genome) position: , mismatch: 5, identity: 0.833

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
accttcaaacccgcgccattgctgggctcg	Protospacer
  ******* ****************.*.*

9. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to KY271395 (Klebsiella phage 2b LV-2017, complete genome) position: , mismatch: 5, identity: 0.833

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
accttcaaacccgcgccattgctgggctcg	Protospacer
  ******* ****************.*.*

10. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to KY271396 (Klebsiella phage 2 LV-2017, complete genome) position: , mismatch: 5, identity: 0.833

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
accttcaaacccgcgccattgctgggctcg	Protospacer
  ******* ****************.*.*

11. spacer 2.11|1241838|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 6, identity: 0.812

-atacagtagcaaaataaaaaggccgcgtgagc	CRISPR spacer
caaatagc-gcaaagaaaaaaggccgcgtgagc	Protospacer
 * *.**. *****. *****************

12. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT307967 (Yersinia pseudotuberculosis strain IP2666 plasmid pYV2666, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

13. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_010157 (Yersinia pestis Angola plasmid new_pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

14. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_006153 (Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

15. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_005813 (Yersinia pestis biovar Microtus str. 91001 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

16. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009491 (Yersinia pestis strain PBM19 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

17. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_010635 (Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

18. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009758 (Yersinia pseudotuberculosis strain EP2/+ plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

19. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009779 (Yersinia pseudotuberculosis PB1/+ plasmid pYAB, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

20. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009711 (Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

21. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009713 (Yersinia pestis Pestoides F plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

22. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009703 (Yersinia pestis strain Harbin35 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

23. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009783 (Yersinia pestis strain El Dorado plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

24. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009721 (Yersinia pestis strain Shasta plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

25. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045260 (Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

26. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033695 (Yersinia pestis strain FDAARGOS_602 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

27. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_009377 (Yersinia pestis Pestoides F plasmid CD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

28. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_014017 (Yersinia pestis Z176003 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

29. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_017263 (Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

30. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033697 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

31. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033712 (Yersinia pseudotuberculosis strain FDAARGOS_581 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

32. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033714 (Yersinia pseudotuberculosis strain FDAARGOS_580 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

33. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032567 (Yersinia pseudotuberculosis strain IP2666pIB1 plasmid pIB1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

34. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033708 (Yersinia pseudotuberculosis strain FDAARGOS_583 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

35. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045147 (Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

36. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045156 (Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

37. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045160 (Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

38. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006747 (Yersinia pestis 8787 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

39. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009972 (Yersinia pestis CO92 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

40. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_003131 (Yersinia pestis CO92 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

41. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045151 (Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

42. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006791 (Yersinia pestis 2944 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

43. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006750 (Yersinia pestis 3770 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

44. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006757 (Yersinia pestis 1522 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

45. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT596222 (Yersinia pseudotuberculosis isolate NZYP4713 plasmid 2) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

46. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033710 (Yersinia pseudotuberculosis strain FDAARGOS_582 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

47. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_017157 (Yersinia pestis D182038 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

48. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_017153 (Yersinia pestis D106004 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

49. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033716 (Yersinia pseudotuberculosis strain FDAARGOS_579 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

50. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_004839 (Yersinia pestis strain KIM5 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

51. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033689 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

52. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006761 (Yersinia pestis 1413 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

53. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006780 (Yersinia pestis 1412 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

54. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006753 (Yersinia pestis 3067 plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

55. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016274 (Yersinia pestis strain Cadman plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

56. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019710 (Yersinia pestis strain 195/P plasmid pCD1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

57. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009905 (Yersinia pestis Antiqua plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

58. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009990 (Yersinia pestis strain Nicholisk 41 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

59. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009937 (Yersinia pestis Angola plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

60. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009842 (Yersinia pestis strain Dodson plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

61. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010069 (Yersinia pseudotuberculosis str. PA3606 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

62. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010246 (Yersinia pestis Pestoides G plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

63. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010022 (Yersinia pestis str. Pestoides B plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

64. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_015056 (Yersinia pestis Java 9 plasmid pCD, complete sequence) position: , mismatch: 6, identity: 0.812

ctctattgccgggggtcgagatggccgcctgc--	CRISPR spacer
ctctattgccaggcgtcgagatggt--gctgccg	Protospacer
**********.** **********.   ****

65. spacer 2.20|1242387|29|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 6, identity: 0.793

cttgttaaatacaggcggcggcggggttg	CRISPR spacer
cgagagaaatacaggcgacggcgcggttg	Protospacer
*  *  ***********.***** *****

66. spacer 2.20|1242387|29|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to AP013537 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G6, isolate: uvMED-CGR-C59A-MedDCM-OCT-S34-C49) position: , mismatch: 6, identity: 0.793

cttgttaaatacaggcggcggcggggttg	CRISPR spacer
catcgcaaatacaggcggcggcggtggtg	Protospacer
* *  .****************** * **

67. spacer 2.20|1242387|29|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to AP014007 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C59A-MedDCM-OCT-S29-C45, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.793

cttgttaaatacaggcggcggcggggttg	CRISPR spacer
catcgcaaatacaggcggcggcggtggtg	Protospacer
* *  .****************** * **

68. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to NZ_CP033726 (Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence) position: , mismatch: 6, identity: 0.812

--tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agtcg--ggccgcgttcttgacctggctgtcggt	Protospacer
  ***  **. ****** * **************

69. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to NZ_CP033726 (Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM2U-F1, complete sequence) position: , mismatch: 6, identity: 0.812

--tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agtcg--ggccgcgttcttgacctggctgtcggt	Protospacer
  ***  **. ****** * **************

70. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP047230 (Moraxella osloensis strain YV1 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.8

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
cagttcaaagccgcgccattactgggctag	Protospacer
.. *****************.*****.* *

71. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 6, identity: 0.8

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
accttcaaacccgcgccattgctggactcg	Protospacer
  ******* ***************..*.*

72. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NC_008771 (Verminephrobacter eiseniae EF01-2 plasmid pVEIS01, complete sequence) position: , mismatch: 6, identity: 0.8

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
ggccgaaaagccgcgccaatgctgggtttc	Protospacer
 **.  ************ **********

73. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_KX364409 (Aeromonas salmonicida subsp. salmonicida strain M16474-11 plasmid pAsa8, complete sequence) position: , mismatch: 6, identity: 0.8

----tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
gcgatgc----aagccgcgccgttgctgggtttt	Protospacer
    ***    **********.***********

74. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 6, identity: 0.8

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
agcctacaggccgcgccattactgggtttg	Protospacer
 **.*  *.***********.*********

75. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 6, identity: 0.8

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
agcctacaggccgcgccattactgggtttg	Protospacer
 **.*  *.***********.*********

76. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 6, identity: 0.8

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
agcctacaggccgcgccattactgggtttg	Protospacer
 **.*  *.***********.*********

77. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 6, identity: 0.8

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
agcctacaggccgcgccattactgggtttg	Protospacer
 **.*  *.***********.*********

78. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 6, identity: 0.8

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
agcctacaggccgcgccattactgggtttg	Protospacer
 **.*  *.***********.*********

79. spacer 1.8|1223757|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

gctcccgcg-----ggcgctcctgttggccagcatca	CRISPR spacer
-----cgcgaccgtggcgatcctgctggccagcatca	Protospacer
     ****     **** *****.************

80. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044974 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B4) plasmid pPBL-H3_B4-2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

81. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

82. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015373 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

83. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026268 (Aminobacter sp. MSH1 plasmid pBAM1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

84. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

85. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_017908 (Mycobacterium abscessus subsp. bolletii F1725 plasmid BRA100, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

86. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

87. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JX469834 (Uncultured bacterium plasmid pDS3, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

88. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JX469828 (Uncultured bacterium plasmid pRSB223, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

89. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JX469831 (Uncultured bacterium plasmid pKSP212, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

90. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044977 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

91. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JN106171 (Uncultured bacterium plasmid pAKD26, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

92. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JN106172 (Uncultured bacterium plasmid pAKD29, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

93. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JN106173 (Uncultured bacterium plasmid pAKD31, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

94. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JN106174 (Uncultured bacterium plasmid pAKD33, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

95. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JN106165 (Uncultured bacterium plasmid pAKD14, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

96. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JN106166 (Uncultured bacterium plasmid pAKD15, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

97. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JN106168 (Uncultured bacterium plasmid pAKD17, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

98. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to JN106169 (Uncultured bacterium plasmid pAKD18, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

99. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044551 (Hydrogenophaga sp. BPS33 plasmid pBPS33-2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

100. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_016968 (Comamonas testosteroni plasmid pTB30, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

101. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

102. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017760 (Cupriavidus necator strain NH9 plasmid pENH91, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

103. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053554 (Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

104. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to KF743817 (Proteus mirabilis plasmid R772, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

105. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to KF743818 (Bordetella bronchiseptica plasmid R906, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

106. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038640 (Cupriavidus oxalaticus strain X32 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

107. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_019263 (Delftia acidovorans plasmid pLME1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

108. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_019264 (Delftia acidovorans plasmid pNB8c, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

109. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_019283 (Delftia acidovorans plasmid pC1-1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

110. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_019320 (Variovorax sp. DB1 plasmid pDB1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

111. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

112. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_021077 (Comamonas sp. 7D-2 plasmid pBHB, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

113. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_007337 (Cupriavidus pinatubonensis JMP134 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

114. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594677 (Variovorax sp. PBS-H4 plasmid 3) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

115. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_006830 (Achromobacter xylosoxidans A8 plasmid pA81, complete sequence) position: , mismatch: 7, identity: 0.781

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctggccgaccgcctggagatcgaggtggacgg	Protospacer
* *..*************.*.******* .**

116. spacer 1.24|1224734|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014690 (Gluconobacter albidus strain TMW2.1191 plasmid pGS1191_1, complete sequence) position: , mismatch: 7, identity: 0.781

cgatatttatccagactgtcggacagggtggt	CRISPR spacer
cgctgcttatccagactgtccggcagggtcgg	Protospacer
** *..************** *.****** *

117. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

118. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

119. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

agcacaatcattattagatgaactt--tcatcaa	CRISPR spacer
aacacaagaattattagatgaacttggtgatg--	Protospacer
*.*****  ****************  * **

120. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
ctgccttggcgggggtcgagatgaccgccgac	Protospacer
** . *** **************.***** .*

121. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

122. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

123. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

124. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021819 (Sinorhizobium meliloti strain M162 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

125. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

126. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.781

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
cagagctccgccagccgcaccggcgacggtgc	Protospacer
***..  * **************.*.******

127. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP011866 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence) position: , mismatch: 7, identity: 0.767

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
gggctacaagccgcgccattgctggatttc	Protospacer
 * .*  ******************.***

128. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP011866 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence) position: , mismatch: 7, identity: 0.767

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
gggctacaagccgcgccattgctggatttc	Protospacer
 * .*  ******************.***

129. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP011866 (Enterobacter asburiae strain ATCC 35953 plasmid unnamed 3, complete sequence) position: , mismatch: 7, identity: 0.767

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
gggctacaagccgcgccattgctggatttc	Protospacer
 * .*  ******************.***

130. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NC_019298 (Rahnella sp. WMR121 plasmid pHW121, complete sequence) position: , mismatch: 7, identity: 0.767

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
gggctacaagccgcgccattgctggatttc	Protospacer
 * .*  ******************.***

131. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NC_011667 (Thauera sp. MZ1T plasmid pTha01, complete sequence) position: , mismatch: 7, identity: 0.767

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
cggcgcaaagccgcgccgttgctgggggtg	Protospacer
.* . ************.********  **

132. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NC_012209 (Yersinia enterocolitica plasmid pYe4449-2, complete sequence) position: , mismatch: 7, identity: 0.767

tgcttca-aagccgcgccattgctgggtttg	CRISPR spacer
-acgccgtaagccgcgccattactggttttg	Protospacer
 .* .*. *************.**** ****

133. spacer 1.5|1223574|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028919 (Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tccagcattgacgcgaaccctgcgccgctggc	CRISPR spacer
gccgaccttgccgcgatccctgcgccgctgcg	Protospacer
 **..* *** ***** *************

134. spacer 1.8|1223757|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 8, identity: 0.75

gctcccgcgggcgctcctgttggccagcatca	CRISPR spacer
gatgacgcgagcgctcttgttggccagcgcga	Protospacer
* *  ****.******.***********.. *

135. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040989 (Vibrio furnissii strain FDAARGOS_777 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
ctatgccaccgcctggacgttgaggtgattgc	Protospacer
* .  * ********** *********.***

136. spacer 1.11|1223940|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035511 (Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
gggcatggtgatgctgatcgacgtgggcgggc	Protospacer
* *.. . **** ******* ***********

137. spacer 1.15|1224184|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042333 (Bosea sp. F3-2 plasmid pB32-2, complete sequence) position: , mismatch: 8, identity: 0.75

--ccggttttagctcgctggaaacctcgcttttg	CRISPR spacer
agcagggcc--gctcgctggaatcctcggttttg	Protospacer
  * ** ..  *********** ***** *****

138. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024200 (Thalassospira marina strain CSC3H3 plasmid pCSC3H3, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
acggcccaggccagccgcgctggtggcggtgc	Protospacer
  **    **********.*.***********

139. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

140. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

141. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

142. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

143. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

144. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

145. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

146. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

147. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

148. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

149. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

150. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gagagctccgccagccgcaccggcgacggtgc	Protospacer
 **..  * **************.*.******

151. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_016585 (Azospirillum lipoferum 4B plasmid AZO_p1, complete sequence) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
caggcgaaggccagccgcaccggcccctgccc	Protospacer
**** ** ***************.  * *. *

152. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to KC292024 (Halovirus HHTV-2, complete genome) position: , mismatch: 8, identity: 0.75

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
caggagacggccagcctctccgggtgggaggt	Protospacer
**************** * ****  * *. *.

153. spacer 2.25|1242689|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 8, identity: 0.75

cttggcagggctgcgccgcaatggcagcaaca	CRISPR spacer
ctgtgatgggctgcgccgcattggcggcaatg	Protospacer
**  *  ************* ****.****..

154. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gaaatggtggcgtttgtcacctggatgtccga	Protospacer
  . **********.********* **** *

155. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to NC_021304 (Streptomyces phage Sujidade, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gttcttctggcgttcgtcgcctggctgtccgt	Protospacer
 . .*  ***********.********** **

156. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to MG663585 (Streptomyces phage ToriToki, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

157. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to MK112550 (Streptomyces phage Olicious, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

158. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to MG663582 (Streptomyces phage HaugeAnator, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

159. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to MG663586 (Streptomyces phage ZooBear, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

160. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to NC_048686 (Streptomyces phage Immanuel3, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

161. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to MG663584 (Streptomyces phage Romero, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

162. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gaaatggtggcgtttgtcacctggatgtccga	Protospacer
  . **********.********* **** *

163. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to NC_021304 (Streptomyces phage Sujidade, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gttcttctggcgttcgtcgcctggctgtccgt	Protospacer
 . .*  ***********.********** **

164. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to MG663585 (Streptomyces phage ToriToki, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

165. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to MK112550 (Streptomyces phage Olicious, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

166. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to MG663582 (Streptomyces phage HaugeAnator, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

167. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to MG663586 (Streptomyces phage ZooBear, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

168. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to NC_048686 (Streptomyces phage Immanuel3, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

169. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to MG663584 (Streptomyces phage Romero, complete genome) position: , mismatch: 8, identity: 0.75

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
agcttggtggcgttcgtcaccttggtgttcat	Protospacer
   ******************* * ***. .*

170. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP038104 (Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pAsa9-like, complete sequence) position: , mismatch: 8, identity: 0.733

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
ttgcgcaaagccgcgccgttgctgggaata	Protospacer
*  . ************.********  *.

171. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_KY555070 (Aeromonas salmonicida subsp. salmonicida strain 01-B526 plasmid pAsa9, complete sequence) position: , mismatch: 8, identity: 0.733

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
ttgcgcaaagccgcgccgttgctgggaata	Protospacer
*  . ************.********  *.

172. spacer 1.1|1223329|33|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.727

tcgtacaccagcgctttaccggagtgtccgtgc	CRISPR spacer
tcgaacaccggcgctttaccggaggtcatcggc	Protospacer
*** *****.**************  . .  **

173. spacer 1.5|1223574|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_049851 (Burkholderia phage BcepSauron, complete genome) position: , mismatch: 9, identity: 0.719

tccagcattgacgcgaaccctgcgccgctggc	CRISPR spacer
tgctctgccgacgcgaacactgcgtcgctggc	Protospacer
* *  ....********* *****.*******

174. spacer 1.5|1223574|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_049850 (Burkholderia phage BcepSaruman, complete genome) position: , mismatch: 9, identity: 0.719

tccagcattgacgcgaaccctgcgccgctggc	CRISPR spacer
tgctctgccgacgcgaacactgcgtcgctggc	Protospacer
* *  ....********* *****.*******

175. spacer 1.10|1223879|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044073 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cagatcgaccgcctggaggttgaggtggttgg	CRISPR spacer
gagatcgcccgcctggaggctgagcaagacga	Protospacer
 ****** ***********.****  .* .*.

176. spacer 1.11|1223940|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
ggcccgcaagattccgatcgccgtgcgcgggc	Protospacer
*  . *   *****.********** ******

177. spacer 1.18|1224367|33|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030128 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

cgaaattcagcgtctggaatgcaaggattttgt	CRISPR spacer
cgaaatacagcgtcgggaatgcaacagtacctt	Protospacer
****** ******* ********* ..* .. *

178. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025882 (Escherichia coli strain 503440 plasmid p503440_52, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

179. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025895 (Escherichia coli strain 503025 plasmid p503025_52, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

180. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025867 (Escherichia coli strain 504211 plasmid p504211_50, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

181. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025980 (Escherichia marmotae strain HT073016 plasmid pEM148, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

182. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025871 (Escherichia coli strain 503829 plasmid p503829_52, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

183. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054369 (Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

184. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006000 (Escherichia coli B7A plasmid pEB2, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

185. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012377 (Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

186. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050647 (Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

187. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

188. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010126 (Escherichia coli strain C8 plasmid A, complete genome) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

189. spacer 2.6|1241533|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031323 (Escherichia coli strain ST2350 isolate Es_ST2350_SE1_NDM_03_2018 plasmid pEsST2350_SE_2, complete sequence) position: , mismatch: 9, identity: 0.719

tggcgaaacaggccagagaacgcgaattgcag	CRISPR spacer
gtgaaaaacaggccagagaaggtgaatttgat	Protospacer
  * .*************** *.*****  *

190. spacer 2.9|1241716|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ttggcatggctggcgacgtagcgaacaaaatc	CRISPR spacer
ttggcgtggctggcgacgtcgcgctcccggac	Protospacer
*****.************* ***  *  .. *

191. spacer 2.9|1241716|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

ttggcatggctggcgacgtagcgaacaaaatc	CRISPR spacer
ttggcgtggctggcgacgtcgcgctcccggac	Protospacer
*****.************* ***  *  .. *

192. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009975 (Pseudomonas putida S12 plasmid pTTS12, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

193. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039989 (Pseudomonas aeruginosa strain T2436 plasmid pBT2436, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

194. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039991 (Pseudomonas aeruginosa strain T2101 plasmid pBT2101, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

195. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045917 (Pseudomonas aeruginosa strain CF39S plasmid pCF39S, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

196. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MF344571 (Pseudomonas aeruginosa plasmid pR31014-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

197. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MF344568 (Pseudomonas aeruginosa plasmid p727-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

198. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MF344569 (Pseudomonas aeruginosa plasmid p12939-PER, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

199. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MF344570 (Pseudomonas aeruginosa plasmid pA681-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

200. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039294 (Pseudomonas aeruginosa strain PABL048 plasmid pPABL048, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

201. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to CP027478 (Pseudomonas koreensis strain P19E3 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

202. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040126 (Pseudomonas aeruginosa strain PA298 plasmid pBM908, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

203. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015879 (Pseudomonas citronellolis strain SJTE-3 plasmid pRBL16, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

204. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016215 (Pseudomonas aeruginosa strain PA121617 plasmid pBM413, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

205. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY883660 (Pseudomonas putida strain SY153 plasmid pSY153-MDR, complete sequence) position: , mismatch: 9, identity: 0.719

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacctgtgaagctg	Protospacer
 . * *** *******************...

206. spacer 2.12|1241899|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047261 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence) position: , mismatch: 9, identity: 0.719

caatgccgttttgcccgagttttcaccgccgt	CRISPR spacer
aaatgcggttttgcccgggttttcgaccacaa	Protospacer
 ***** **********.******. *  *.

207. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044424 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN1, complete sequence) position: , mismatch: 9, identity: 0.719

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
acggggcgccgggggacgagatggccgcccgc	Protospacer
 .  . .******** *************.**

208. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to KT381276 (Mycobacterium phage Serenity, complete genome) position: , mismatch: 9, identity: 0.719

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
acacgctgccggtggtcgagatgaccgcctac	Protospacer
 . ...****** **********.******.*

209. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.719

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
cccggcccacggaggccgagatggccgcctgc	Protospacer
*.* ...  ***.**.****************

210. spacer 2.18|1242265|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to AP014927 (Ralstonia phage RSF1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

acatctcgcggacaatagcgatttccaccgtc	CRISPR spacer
tcgatgcgcggccaacagcgatttccaccgga	Protospacer
 *. . ***** ***.**************

211. spacer 2.22|1242506|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to LR877331 (Klebsiella phage vB_KpnM_311F genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

212. spacer 2.22|1242506|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MN434095 (Klebsiella pneumoniae phage JIPh_Kp122, complete genome) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

213. spacer 2.22|1242506|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to KY000080 (Klebsiella phage KPV15, complete genome) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

214. spacer 2.22|1242506|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_028686 (Klebsiella phage JD18, complete genome) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

215. spacer 2.22|1242506|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MK421971 (Klebsiella phage vB_KpnM_GF, partial genome) position: , mismatch: 9, identity: 0.719

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ctgcattggattgataaagacgggtactggga	Protospacer
* * ********.**.*********** ...

216. spacer 2.27|1242811|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tacctgccgggactggagtgcaggtaacccca	CRISPR spacer
cacctgcccggactgaagtgcaggccggccgg	Protospacer
.******* ******.********. . ** .

217. spacer 2.27|1242811|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 9, identity: 0.719

tacctgccgggactggagtgcaggtaacccca	CRISPR spacer
cacctgcccggactgaagtgcaggccggccgg	Protospacer
.******* ******.********. . ** .

218. spacer 2.27|1242811|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tacctgccgggactggagtgcaggtaacccca	CRISPR spacer
cacctgcccggactgaagtgcaggccggccgg	Protospacer
.******* ******.********. . ** .

219. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 9, identity: 0.719

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
cgggaggtggtgttggtcacctggctgtccaa	Protospacer
. *  *****.*** ************** .

220. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.719

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gcgttggtggcgtccgtcacatgggccgcgcc	Protospacer
 ************.****** *** .  ** .

221. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to NC_011368 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201, complete sequence) position: , mismatch: 9, identity: 0.719

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
cgggaggtggtgttggtcacctggctgtccaa	Protospacer
. *  *****.*** ************** .

222. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 9, identity: 0.719

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
gcgttggtggcgtccgtcacatgggccgcgcc	Protospacer
 ************.****** *** .  ** .

223. spacer 3.1|3329297|30|NZ_CP016406|CRISPRCasFinder matches to NZ_CP014310 (Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

tgcttcaaagccgcgccattgctgggtttg	CRISPR spacer
gtcttctaagccgcgccattgctcacacgg	Protospacer
  **** **************** .  . *

224. spacer 1.11|1223940|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
cctgacgctgattctggtcgccgggggcgggg	Protospacer
 *  . ..********.****** *******

225. spacer 1.11|1223940|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
cctgacgctgattctggtcgccgggggcgggg	Protospacer
 *  . ..********.****** *******

226. spacer 1.11|1223940|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
cctgacgctgattctggtcgccgggggcgggg	Protospacer
 *  . ..********.****** *******

227. spacer 1.11|1223940|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 10, identity: 0.688

gcgtggattgattctgatcgccgtgggcgggc	CRISPR spacer
cctgacgctgattctggtcgccgggggcgggg	Protospacer
 *  . ..********.****** *******

228. spacer 1.21|1224551|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atgccctgttcggcaaaatcccgccacgctgg	CRISPR spacer
tggccctgtccggcacaatcccgccggagcag	Protospacer
  *******.***** *********. . ..*

229. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
tcttatggcattattagatgaattttcaacaa	Protospacer
  .   . **************.***** ***

230. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

231. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

232. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

233. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

234. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

235. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

236. spacer 1.26|1224856|32|NZ_CP016406|CRISPRCasFinder,CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

237. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY494864 (Pseudomonas aeruginosa strain FFUP_PS_37 plasmid pJB37, complete sequence) position: , mismatch: 10, identity: 0.688

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacccgtgaagctg	Protospacer
 . * *** *************.*****...

238. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT969519 (Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 1) position: , mismatch: 10, identity: 0.688

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacccgtgaagctg	Protospacer
 . * *** *************.*****...

239. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN433457 (Pseudomonas aeruginosa strain PAB546 plasmid pNK546-KPC, complete sequence) position: , mismatch: 10, identity: 0.688

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacccgtgaagctg	Protospacer
 . * *** *************.*****...

240. spacer 2.10|1241777|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045003 (Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence) position: , mismatch: 10, identity: 0.688

cataaattactcgatgcgtacctgtgaaatct	CRISPR spacer
gggatattcctcgatgcgtacccgtgaagctg	Protospacer
 . * *** *************.*****...

241. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MG962370 (Mycobacterium phage Kykar, complete genome) position: , mismatch: 10, identity: 0.688

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
tcacgcagccggtggtcgagatgaccgcctac	Protospacer
.. ... ***** **********.******.*

242. spacer 2.13|1241960|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MK359312 (Mycobacterium phage Fushigi, complete genome) position: , mismatch: 10, identity: 0.688

ctctattgccgggggtcgagatggccgcctgc	CRISPR spacer
tcacgcagccggtggtcgagatgaccgcctac	Protospacer
.. ... ***** **********.******.*

243. spacer 2.14|1242021|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 10, identity: 0.688

gtgatccgcgcctatgacgcaatggtaacgac	CRISPR spacer
gtgatccgcgcctatgatgccatcaccggaaa	Protospacer
*****************.** ** .. . .*

244. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gcatagacggccagccccaccggcggcgtcag	Protospacer
  . ************ ******.**** ..

245. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020568 (Kitasatospora aureofaciens strain DM-1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
ggtcgaacggcccgccgcaccggcggcggcac	Protospacer
 .  ..****** **********.*****..*

246. spacer 2.16|1242143|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MH727593 (Acidovorax phage ACPWH, complete genome) position: , mismatch: 10, identity: 0.688

caggagacggccagccgcaccggtggcggtgc	CRISPR spacer
gtcggcggggccggccgcaccgttggcggtgt	Protospacer
   *. . ****.********* ********.

247. spacer 2.30|1242986|32|NZ_CP016406|PILER-CR matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
aatctcatggcgtccgtcccctggctgtcgtg	Protospacer
   .* .******.**** ***********

248. spacer 2.32|1242973|32|NZ_CP016406|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

tcgttggtggcgttcgtcacctggctgtcggt	CRISPR spacer
aatctcatggcgtccgtcccctggctgtcgtg	Protospacer
   .* .******.**** ***********

249. spacer 2.33|1243034|32|NZ_CP016406|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

250. spacer 2.33|1243034|32|NZ_CP016406|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

251. spacer 1.13|1224062|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to NC_010683 (Ralstonia pickettii 12J plasmid pRPIC01, complete sequence) position: , mismatch: 11, identity: 0.656

agaatattcaactccagcgggaaaaagacgca	CRISPR spacer
tcgtcgctcaactccagcgtgaaaaaggcggg	Protospacer
  . ...************ *******.** .

252. spacer 2.5|1241472|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to KU963249 (Gordonia phage Yeezy, complete genome) position: , mismatch: 11, identity: 0.656

gcccaattgccggcgacggtttccatgtcagc	CRISPR spacer
gcgcaattgccggggacggtttctgcacagat	Protospacer
** ********** *********..... ...

253. spacer 2.22|1242506|32|NZ_CP016406|PILER-CR,CRISPRCasFinder,CRT matches to MH729874 (Klebsiella phage KP179, complete genome) position: , mismatch: 11, identity: 0.656

caggattggattaatgaagacgggtacgaaat	CRISPR spacer
ttacattggattgataaagacgggtactggga	Protospacer
. . ********.**.*********** ...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5250 : 41280

Escherichia_phage(55.81%)

portal,plate,integrase,head,lysis,capsid,holin,tail,terminase

attL 5093:5139|attR 36655:36701

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5093:5139	attL	NA	NA	NA	NA
WP_000468308.1\|5250_5469_-	prophage transcriptional regulator OgrK	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
WP_001598749.1\|5550_6714_-	phage late control D family protein	U5N3V4	Enterobacteria_phage	1.4e-205	99.5
WP_000978896.1\|6713_7193_-\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	6.6e-85	100.0
WP_023993657.1\|7207_9655_-\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	0.0e+00	96.8
WP_000785970.1\|9647_9767_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_001031303.1\|9799_10075_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
WP_001251408.1\|10131_10650_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_001286698.1\|10662_11853_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	3.7e-225	99.7
WP_023993658.1\|11912_12506_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	3.9e-103	96.4
WP_075323717.1\|12533_12932_+\|tail	phage tail protein	A0A0F7LBW5	Escherichia_phage	1.6e-12	38.3
WP_006673257.1\|12934_13375_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.2e-51	67.3
WP_006673255.1\|13346_13949_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	6.6e-98	90.0
WP_023993680.1\|15281_15893_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	2.4e-116	98.5
WP_023993681.1\|15885_16794_-\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	1.7e-161	99.3
WP_001389961.1\|16798_17146_-	GPW/gp25 family protein	A0A0F7LDQ1	Escherichia_phage	3.8e-58	99.1
WP_001093731.1\|17142_17778_-\|plate	phage baseplate assembly protein V	U5N3F0	Enterobacteria_phage	2.5e-111	98.1
WP_023993682.1\|17844_18297_-	phage virion morphogenesis protein	A0A0F7LBV9	Escherichia_phage	5.9e-75	98.7
WP_000917182.1\|18289_18757_-\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	1.9e-81	99.4
WP_023993683.1\|18864_19290_-\|lysis	LysB family phage lysis regulatory protein	Q858W0	Yersinia_virus	6.1e-66	97.2
WP_023993684.1\|19277_19703_-	hypothetical protein	M1SV74	Escherichia_phage	5.5e-59	98.6
WP_001144101.1\|19717_20215_-	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
WP_000123123.1\|20214_20496_-\|holin	phage holin family protein	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
WP_000846409.1\|20499_20703_-\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000988636.1\|20702_21212_-\|head	head completion/stabilization protein	A0A0F7LDJ1	Escherichia_phage	8.6e-91	100.0
WP_000203461.1\|21311_22055_-\|terminase	terminase endonuclease subunit	A0A0F7LBP7	Escherichia_phage	8.6e-124	98.4
WP_016237184.1\|22058_23132_-\|capsid	phage major capsid protein, P2 family	Q94MK7	Enterobacteria_phage	5.1e-202	99.7
WP_023993685.1\|23190_24045_-\|capsid	GPO family capsid scaffolding protein	A0A0F7LA11	Escherichia_phage	6.4e-139	99.6
WP_023993686.1\|24218_25991_+\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
WP_001620981.1\|25990_27025_+\|portal	phage portal protein	U5N087	Enterobacteria_phage	2.4e-201	99.4
WP_001161722.1\|27451_28393_+	hypothetical protein	Q2P9W7	Enterobacteria_phage	2.0e-133	73.7
WP_001389947.1\|28475_28958_-	hypothetical protein	NA	NA	NA	NA
WP_000119270.1\|29141_29627_-	ImmA/IrrE family metallo-endopeptidase	Q854W5	Mycobacterium_virus	6.0e-09	37.1
WP_001598736.1\|30763_33040_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	98.3
WP_000027673.1\|33029_33305_-	DUF5405 family protein	S4TP00	Salmonella_phage	1.9e-44	97.8
WP_001113277.1\|33301_33526_-	TraR/DksA C4-type zinc finger protein	S4TRY6	Salmonella_phage	6.5e-35	98.6
WP_001277898.1\|33528_33828_-	DUF5405 family protein	S4TUD1	Salmonella_phage	3.2e-45	99.0
WP_000557703.1\|33827_34052_-	DUF2732 family protein	S4TP68	Salmonella_phage	4.7e-33	100.0
WP_000217670.1\|34115_34616_-	hypothetical protein	M1SV55	Escherichia_phage	2.6e-92	100.0
WP_001308179.1\|34785_35058_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
WP_000777029.1\|35194_35488_+	helix-turn-helix domain-containing protein	Q1JS37	Enterobacteria_phage	2.7e-49	100.0
WP_000985246.1\|35557_36538_+\|integrase	tyrosine-type recombinase/integrase	S4TP66	Salmonella_phage	4.7e-186	100.0
WP_001233463.1\|36723_37224_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA
36655:36701	attR	NA	NA	NA	NA
WP_001033731.1\|37374_38073_+	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
WP_000580402.1\|38069_39443_+	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	7.2e-15	25.6
WP_000133440.1\|39493_39889_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_000559229.1\|39900_40590_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_000122632.1\|40659_41280_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9

DBSCAN-SWA_2

1407867 : 1416843

Enterobacteria_phage(85.71%)

integrase

attL 1412636:1412651|attR 1419458:1419473

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023993982.1\|1407867_1410201_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	84.4
WP_023993983.1\|1410215_1410536_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_001216603.1\|1410532_1410760_-	hypothetical protein	NA	NA	NA	NA
WP_015701354.1\|1410756_1411308_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	70.4
WP_000556594.1\|1411304_1411571_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	3.7e-29	69.3
WP_000149860.1\|1412108_1412846_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-81	64.4
1412636:1412651	attL	NA	NA	NA	NA
WP_000984209.1\|1412842_1413085_+	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	5.2e-30	77.8
WP_023993984.1\|1413101_1413668_+	bacteriophage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.2e-56	62.7
WP_001604631.1\|1414200_1415610_+	hypothetical protein	NA	NA	NA	NA
WP_001604633.1\|1415646_1416843_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	4.1e-107	50.0
1419458:1419473	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1708760 : 1742608

Salmonella_phage(67.92%)

protease,lysis,coat,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023993447.1\|1708760_1708964_-	transcriptional regulator	I6RSG8	Salmonella_phage	6.1e-32	95.5
WP_023993446.1\|1709122_1709395_-	hypothetical protein	A0A2H4FNB3	Salmonella_phage	2.6e-38	98.9
WP_000582224.1\|1710093_1710849_-	hypothetical protein	H6WRY1	Salmonella_phage	4.2e-150	99.6
WP_023993443.1\|1711162_1711564_-	ParB/RepB/Spo0J family partition protein	S4TTI6	Salmonella_phage	1.3e-70	97.0
WP_023993442.1\|1711560_1712253_-	HNH endonuclease	C6ZR31	Salmonella_phage	1.2e-114	90.7
WP_023993441.1\|1712240_1712411_-	DUF2737 family protein	A0A0N7CAQ8	Salmonella_phage	1.8e-24	98.2
WP_023993440.1\|1712421_1712715_-	DUF2856 family protein	A0A0N7CAQ6	Salmonella_phage	6.8e-48	94.8
WP_023993439.1\|1712761_1713046_-	hypothetical protein	E7C9P9	Salmonella_phage	2.0e-44	96.8
WP_023993438.1\|1713045_1713753_-	hypothetical protein	I6R0N0	Salmonella_phage	9.1e-131	94.9
WP_000902089.1\|1713749_1713893_-	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	1.6e-18	95.7
WP_000156731.1\|1713882_1714071_-	DUF5444 family protein	I6S647	Salmonella_phage	3.7e-31	100.0
WP_000141641.1\|1714051_1714210_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q76H38	Enterobacteria_phage	2.4e-23	100.0
WP_001748038.1\|1714542_1714821_-	hypothetical protein	C6ZR42	Salmonella_phage	1.3e-45	100.0
WP_075322247.1\|1714854_1715574_-	pentapeptide repeat-containing protein	Q76H35	Enterobacteria_phage	2.2e-44	88.3
WP_058649971.1\|1715777_1716311_-	HNH endonuclease	A0A2H4FNF1	Salmonella_phage	9.0e-99	97.2
WP_000947484.1\|1716411_1716828_-	HNH endonuclease	Q5G8U2	Enterobacteria_phage	1.2e-21	40.3
WP_000935320.1\|1717139_1717892_-	helix-turn-helix domain-containing protein	A0A286S2B2	Klebsiella_phage	7.8e-72	63.8
WP_001058406.1\|1717932_1718166_+	hypothetical protein	A0A0P0ZDD7	Stx2-converting_phage	5.6e-21	67.5
WP_000189606.1\|1718316_1718613_+	hypothetical protein	Q9MCQ0	Enterobacteria_phage	1.8e-48	100.0
WP_001125981.1\|1718645_1718792_+	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_075322246.1\|1718784_1719618_+	replication protein	A0A1R3Y5R9	Salmonella_virus	2.1e-150	98.9
WP_023167630.1\|1719614_1720991_+	AAA family ATPase	I6R0N4	Salmonella_phage	6.3e-253	99.1
WP_023993437.1\|1721062_1721335_+	DUF4752 family protein	A0A220NQX8	Salmonella_phage	9.7e-41	96.6
WP_023993436.1\|1721565_1721847_+	hypothetical protein	I6R992	Salmonella_phage	9.4e-23	64.2
WP_001291852.1\|1721849_1722050_+	hypothetical protein	A0A2H4FUS3	Salmonella_phage	1.4e-28	98.5
WP_023993435.1\|1722052_1722475_+	hypothetical protein	A0A2H4FNF5	Salmonella_phage	1.1e-78	99.3
WP_001254236.1\|1722482_1722659_+	NinE family protein	A0A220NRK6	Escherichia_phage	1.9e-26	94.8
WP_000924596.1\|1722661_1723063_+	hypothetical protein	G9L690	Escherichia_phage	7.1e-64	86.5
WP_000950998.1\|1723055_1723232_+	protein ninF	K7P6R5	Enterobacteria_phage	1.4e-24	93.0
WP_001089628.1\|1723224_1723461_+	hypothetical protein	C6ZR59	Salmonella_phage	1.3e-36	93.6
WP_001185533.1\|1723441_1723912_+	hypothetical protein	C6ZR60	Salmonella_phage	2.2e-88	95.5
WP_000337150.1\|1723899_1724082_+	hypothetical protein	C6ZR61	Salmonella_phage	7.2e-24	98.3
WP_000196508.1\|1724078_1724321_+	hypothetical protein	A0A1V0E5R3	Salmonella_phage	5.8e-37	93.8
WP_001047569.1\|1724478_1725258_+	antitermination protein	Q76H66	Enterobacteria_phage	1.2e-128	95.3
WP_000286100.1\|1725679_1725883_+	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
WP_001748050.1\|1725860_1726358_+	lysozyme	A0A1R3Y5W5	Salmonella_virus	7.9e-89	96.4
WP_001748051.1\|1726354_1726813_+\|lysis	lysis protein	A0A2L1IV55	Escherichia_phage	4.3e-57	78.8
WP_023994441.1\|1727022_1727544_+	KilA-N domain-containing protein	H6WRZ8	Salmonella_phage	1.8e-99	98.3
WP_023217190.1\|1728017_1728260_+	DUF2560 family protein	A0A1R3Y5V5	Salmonella_virus	1.9e-35	98.8
WP_058649961.1\|1728262_1728667_+	hypothetical protein	C6ZR73	Salmonella_phage	3.4e-66	98.5
WP_000729924.1\|1728670_1729159_+	hypothetical protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
WP_017441431.1\|1729136_1730636_+	DNA packaging protein	A0A0M4S5Z3	Salmonella_phage	3.1e-306	99.6
WP_017441432.1\|1730635_1732813_+\|portal	portal protein	I6R968	Salmonella_phage	0.0e+00	98.2
WP_017441433.1\|1732826_1733738_+	scaffold protein	A0A1R3Y5R6	Salmonella_virus	1.1e-160	99.7
WP_020899473.1\|1733737_1735030_+\|coat	coat protein	C6ZR10	Salmonella_phage	3.2e-243	99.3
WP_000538675.1\|1735070_1735631_+	hypothetical protein	I6S1J7	Salmonella_phage	7.0e-102	98.4
WP_010835893.1\|1735614_1736115_+	Packaged DNA stabilization protein gp4	I1TEJ0	Salmonella_phage	3.2e-90	100.0
WP_023198766.1\|1736074_1737493_+	packaged DNA stabilization protein gp10	I1TEJ1	Salmonella_phage	1.5e-273	98.9
WP_023198767.1\|1737496_1738198_+	hypothetical protein	C6ZR14	Salmonella_phage	4.0e-70	93.1
WP_017441438.1\|1738197_1738659_+	DUF2824 family protein	C6ZR15	Salmonella_phage	4.3e-73	84.9
WP_023198768.1\|1738661_1739351_+	hypothetical protein	B9UDK9	Salmonella_phage	1.9e-88	89.8
WP_165398880.1\|1739360_1740716_+	phage DNA ejection protein	A0A220NR03	Salmonella_phage	2.3e-239	97.1
WP_001029862.1\|1740715_1742608_+	hypothetical protein	E7C9U6	Salmonella_phage	5.1e-245	78.3

DBSCAN-SWA_4

1869975 : 1877288

Dickeya_phage(16.67%)

integrase,protease

attL 1871226:1871240|attR 1882480:1882494

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001201750.1\|1869975_1871094_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9
WP_023993622.1\|1871090_1873037_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
1871226:1871240	attL	NA	NA	NA	NA
WP_000447499.1\|1873166_1873388_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000520789.1\|1873711_1874032_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000934064.1\|1874062_1876339_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_001117984.1\|1876551_1876749_-	hypothetical protein	NA	NA	NA	NA
WP_023993623.1\|1876910_1877288_-\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.0e-19	40.2
1882480:1882494	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2881216 : 2888467

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023993342.1\|2881216_2882647_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_023993343.1\|2882720_2883416_-	phosphohydrolase	S4W232	Pandoravirus	3.6e-07	28.0
WP_000107435.1\|2883495_2883807_-	hypothetical protein	NA	NA	NA	NA
WP_023993344.1\|2884455_2885652_+	porin OmpS1	Q1MVN1	Enterobacteria_phage	4.3e-109	56.6
WP_024131109.1\|2885910_2886099_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|2886109_2886322_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_023993345.1\|2886776_2888045_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.3e-227	92.2
WP_000394197.1\|2888047_2888467_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5

DBSCAN-SWA_6

3046873 : 3056044

Enterobacteria_phage(71.43%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195340.1\|3046873_3048907_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	6.1e-55	26.9
WP_000703137.1\|3049147_3049606_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_023993390.1\|3049777_3050308_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	2.8e-15	31.7
WP_000950413.1\|3050364_3050832_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|3050878_3051598_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272850.1\|3051594_3053280_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_001240418.1\|3053502_3054234_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_023993392.1\|3054293_3054401_+	protein YohO	NA	NA	NA	NA
WP_000824854.1\|3054381_3055113_-	ABC transporter permease	NA	NA	NA	NA
WP_000569166.1\|3055096_3056044_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8

DBSCAN-SWA_7

3268017 : 3342532

Salmonella_phage(66.2%)

tRNA,terminase,protease,head,capsid,lysis,tail,integrase

attL 3266426:3266439|attR 3343164:3343177

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3266426:3266439	attL	NA	NA	NA	NA
WP_000016631.1\|3268017_3268830_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289141.1\|3268829_3269843_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000699176.1\|3269910_3271047_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	3.8e-22	29.1
WP_000553395.1\|3271150_3272152_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127721.1\|3272148_3273327_-	MFS transporter	NA	NA	NA	NA
WP_001051261.1\|3273506_3273881_-	hypothetical protein	NA	NA	NA	NA
WP_000433425.1\|3274053_3274302_+	transcriptional regulator	A0A0M4UV99	Ralstonia_phage	6.2e-18	60.0
WP_000118256.1\|3274470_3274839_+	C40 family peptidase	H6SUH4	Campylobacter_virus	3.9e-08	37.9
WP_000847535.1\|3274838_3275357_+	YbjP/YqhG family protein	NA	NA	NA	NA
WP_001142900.1\|3275423_3276080_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000817161.1\|3276177_3277392_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_023993415.1\|3277551_3279552_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559749.1\|3279603_3279879_-	YfcL family protein	NA	NA	NA	NA
WP_001066345.1\|3279911_3280460_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_023993416.1\|3280459_3281269_-	TSUP family transporter	NA	NA	NA	NA
WP_000750429.1\|3281268_3282093_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_000918457.1\|3282096_3283182_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	47.8
WP_001650203.1\|3283217_3284150_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730794.1\|3284315_3284867_+	endonuclease SmrB	NA	NA	NA	NA
WP_001195808.1\|3284966_3285452_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_023993417.1\|3285669_3287808_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_023993418.1\|3287807_3289118_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_000030904.1\|3289295_3289580_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001533060.1\|3289950_3291258_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_000776787.1\|3291318_3292074_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_023993419.1\|3292362_3293304_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.3e-145	87.8
WP_023993420.1\|3293617_3294787_+\|integrase	tyrosine-type recombinase/integrase	I6R0M2	Salmonella_phage	1.5e-226	98.7
WP_023993421.1\|3294858_3296157_-	hypothetical protein	A0A1V0E5M2	Salmonella_phage	7.5e-240	96.8
WP_023993422.1\|3296167_3297127_-	hypothetical protein	H6WRW5	Salmonella_phage	3.6e-183	99.4
WP_023993423.1\|3297135_3299856_-	DUF1983 domain-containing protein	S4TTF5	Salmonella_phage	0.0e+00	96.0
WP_023993424.1\|3299855_3300254_-	hypothetical protein	S4TR39	Salmonella_phage	2.9e-70	94.7
WP_023993425.1\|3300260_3300845_-	hypothetical protein	S4TND4	Salmonella_phage	1.1e-105	97.4
WP_023993426.1\|3300844_3301438_-	hypothetical protein	S4TSP7	Salmonella_phage	1.2e-107	95.4
WP_023993427.1\|3301603_3301852_+	hypothetical protein	NA	NA	NA	NA
WP_023993428.1\|3301954_3305293_-\|tail	phage tail tape measure protein	K7P7L6	Enterobacteria_phage	0.0e+00	69.5
WP_023993429.1\|3305351_3305693_-	hypothetical protein	NA	NA	NA	NA
WP_023993430.1\|3305747_3306026_-	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	6.0e-38	88.0
WP_023993431.1\|3306034_3306424_-\|tail	phage tail assembly protein	K7PKV6	Enterobacterial_phage	7.3e-58	85.3
WP_023993432.1\|3306451_3307156_-\|tail	prophage major tail protein	K7PHL2	Enterobacterial_phage	6.7e-94	75.6
WP_000133673.1\|3307213_3307561_-	DUF3168 domain-containing protein	S4TTG3	Salmonella_phage	7.5e-46	78.8
WP_000573485.1\|3307557_3308007_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	7.6e-75	98.7
WP_001007886.1\|3308003_3308354_-\|head	phage head closure protein	S4TND9	Salmonella_phage	1.1e-49	87.9
WP_000571722.1\|3308362_3308689_-\|head,tail	phage gp6-like head-tail connector protein	S4TSQ3	Salmonella_phage	1.8e-54	99.1
WP_023242805.1\|3311285_3313220_-\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	0.0e+00	99.7
WP_024134503.1\|3313278_3314940_-\|terminase	terminase large subunit	S4TSQ6	Salmonella_phage	0.0e+00	99.6
WP_000954404.1\|3314936_3315431_-\|terminase	terminase small subunit	S4TNN3	Salmonella_phage	1.7e-83	100.0
WP_001096739.1\|3315741_3316107_-	HNH endonuclease	S4TTG9	Salmonella_phage	4.3e-52	82.9
WP_000983798.1\|3316099_3316693_-	hypothetical protein	S4TR53	Salmonella_phage	1.2e-112	96.9
WP_001124954.1\|3316673_3317192_-	HNH endonuclease	K7PJS8	Enterobacterial_phage	1.3e-46	54.3
WP_023993433.1\|3317235_3318693_-	glycosyltransferase family 2 protein	S4TSQ9	Salmonella_phage	2.3e-290	99.6
WP_000004347.1\|3318702_3319476_-	DUF1983 domain-containing protein	S4TNN5	Salmonella_phage	3.1e-124	97.7
WP_000509527.1\|3319596_3319932_-	hypothetical protein	S4TTH3	Salmonella_phage	8.0e-61	100.0
WP_001034848.1\|3320008_3320554_+	hypothetical protein	S4TR57	Salmonella_phage	5.0e-97	100.0
WP_001283924.1\|3320698_3320956_-	hypothetical protein	A0A1V0E5Q1	Salmonella_phage	3.8e-39	100.0
WP_000644477.1\|3320952_3321450_-	KilA-N domain-containing protein	S4TSR0	Salmonella_phage	8.1e-94	100.0
WP_001748051.1\|3321659_3322118_-\|lysis	lysis protein	A0A2L1IV55	Escherichia_phage	4.3e-57	78.8
WP_001748050.1\|3322114_3322612_-	lysozyme	A0A1R3Y5W5	Salmonella_virus	7.9e-89	96.4
WP_000286100.1\|3322589_3322793_-	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
WP_001047569.1\|3323214_3323994_-	antitermination protein	Q76H66	Enterobacteria_phage	1.2e-128	95.3
WP_000196508.1\|3324151_3324394_-	hypothetical protein	A0A1V0E5R3	Salmonella_phage	5.8e-37	93.8
WP_000337150.1\|3324390_3324573_-	hypothetical protein	C6ZR61	Salmonella_phage	7.2e-24	98.3
WP_001185533.1\|3324560_3325031_-	hypothetical protein	C6ZR60	Salmonella_phage	2.2e-88	95.5
WP_001089627.1\|3325011_3325248_-	hypothetical protein	C6ZR59	Salmonella_phage	4.3e-37	94.9
WP_000950998.1\|3325240_3325417_-	protein ninF	K7P6R5	Enterobacteria_phage	1.4e-24	93.0
WP_000924596.1\|3325409_3325811_-	hypothetical protein	G9L690	Escherichia_phage	7.1e-64	86.5
WP_001254236.1\|3325813_3325990_-	NinE family protein	A0A220NRK6	Escherichia_phage	1.9e-26	94.8
WP_023993435.1\|3325997_3326420_-	hypothetical protein	A0A2H4FNF5	Salmonella_phage	1.1e-78	99.3
WP_001291852.1\|3326422_3326623_-	hypothetical protein	A0A2H4FUS3	Salmonella_phage	1.4e-28	98.5
WP_023993436.1\|3326625_3326907_-	hypothetical protein	I6R992	Salmonella_phage	9.4e-23	64.2
WP_023993437.1\|3327137_3327410_-	DUF4752 family protein	A0A220NQX8	Salmonella_phage	9.7e-41	96.6
WP_023167630.1\|3327481_3328858_-	AAA family ATPase	I6R0N4	Salmonella_phage	6.3e-253	99.1
WP_000431305.1\|3328854_3329715_-	replication protein	G9L680	Escherichia_phage	3.6e-89	65.0
WP_023167632.1\|3329777_3330038_-	hypothetical protein	G9L679	Escherichia_phage	1.6e-21	61.7
WP_000424139.1\|3330059_3330350_-	hypothetical protein	I6RSP4	Salmonella_phage	9.0e-45	99.0
WP_001180316.1\|3330486_3330714_-	helix-turn-helix domain-containing protein	G9L677	Escherichia_phage	2.1e-33	89.3
WP_000250476.1\|3330791_3331502_+	helix-turn-helix transcriptional regulator	G9L676	Escherichia_phage	4.0e-118	87.7
WP_000759585.1\|3331737_3332757_+	ParA family protein	H2BD62	Pseudomonas_phage	3.5e-51	36.0
WP_000834179.1\|3332903_3333113_-	fumarate hydratase FumD	I6R0R9	Salmonella_phage	7.2e-28	91.3
WP_023233618.1\|3333480_3333843_+	hypothetical protein	C6ZR44	Salmonella_phage	1.1e-52	88.3
WP_000843522.1\|3333859_3334303_+	hypothetical protein	E5AGE5	Erwinia_phage	3.0e-47	62.6
WP_023233617.1\|3334391_3335024_+	hypothetical protein	A0A2H4FRY7	Salmonella_phage	4.2e-79	81.1
WP_000141641.1\|3335232_3335391_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q76H38	Enterobacteria_phage	2.4e-23	100.0
WP_000156731.1\|3335371_3335560_+	DUF5444 family protein	I6S647	Salmonella_phage	3.7e-31	100.0
WP_000902089.1\|3335549_3335693_+	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	1.6e-18	95.7
WP_023993438.1\|3335689_3336397_+	hypothetical protein	I6R0N0	Salmonella_phage	9.1e-131	94.9
WP_023993439.1\|3336396_3336681_+	hypothetical protein	E7C9P9	Salmonella_phage	2.0e-44	96.8
WP_023993440.1\|3336727_3337021_+	DUF2856 family protein	A0A0N7CAQ6	Salmonella_phage	6.8e-48	94.8
WP_023993441.1\|3337031_3337202_+	DUF2737 family protein	A0A0N7CAQ8	Salmonella_phage	1.8e-24	98.2
WP_023993442.1\|3337189_3337882_+	HNH endonuclease	C6ZR31	Salmonella_phage	1.2e-114	90.7
WP_023993443.1\|3337878_3338280_+	ParB/RepB/Spo0J family partition protein	S4TTI6	Salmonella_phage	1.3e-70	97.0
WP_000582224.1\|3338593_3339349_+	hypothetical protein	H6WRY1	Salmonella_phage	4.2e-150	99.6
WP_000509169.1\|3340676_3340943_+	hypothetical protein	A0A1V0E5L9	Salmonella_phage	3.7e-45	97.7
WP_001556007.1\|3341265_3341484_+	excisionase	A0A1V0E5M4	Salmonella_phage	5.7e-36	100.0
WP_000533679.1\|3341461_3342532_+\|integrase	tyrosine-type recombinase/integrase	A0A1V0E5M7	Salmonella_phage	1.0e-154	100.0
3343164:3343177	attR	NA	NA	NA	NA

DBSCAN-SWA_8

4540153 : 4589897

Burkholderia_phage(34.78%)

transposase,tRNA,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023994022.1\|4540153_4541140_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001147297.1\|4541215_4542295_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	1.2e-28	29.1
WP_000918353.1\|4542326_4543742_-	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	7.0e-199	78.4
WP_000235550.1\|4543806_4544790_+	quinone oxidoreductase	NA	NA	NA	NA
WP_000891414.1\|4544964_4545207_-	envelope stress response protein PspG	NA	NA	NA	NA
WP_001182224.1\|4545374_4546373_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039342.1\|4546460_4547771_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416271.1\|4548017_4548533_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4548631_4548841_-	CsbD family protein	NA	NA	NA	NA
WP_001575282.1\|4548862_4548976_-	hypothetical protein	NA	NA	NA	NA
WP_001128112.1\|4548972_4550298_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4550476_4551085_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002900.1\|4551193_4551562_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4551732_4554153_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4554251_4555124_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019219.1\|4555137_4555635_-	chorismate lyase	NA	NA	NA	NA
WP_000782497.1\|4555815_4556733_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973678.1\|4556896_4558255_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4558343_4559453_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695415.1\|4559814_4561005_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382573.1\|4561136_4562681_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252085.1\|4562695_4563586_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982749.1\|4563751_4564162_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750804.1\|4564304_4566401_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_023993545.1\|4566400_4567135_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_122821798.1\|4567131_4567800_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_023994532.1\|4567833_4568076_-	hypothetical protein	NA	NA	NA	NA
WP_000790024.1\|4568519_4570169_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136400.1\|4570513_4571863_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4571993_4572341_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226439.1\|4572917_4573205_+	membrane protein	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
WP_023993546.1\|4573207_4573813_+	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	5.5e-60	59.4
WP_000777266.1\|4573825_4574140_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_023993547.1\|4574299_4574755_+	hypothetical protein	NA	NA	NA	NA
WP_023993548.1\|4574751_4574949_+	hypothetical protein	Q6QIB1	Burkholderia_phage	1.3e-07	50.0
WP_023993549.1\|4574938_4576366_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	3.1e-194	70.9
WP_000907494.1\|4576365_4576890_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_001600578.1\|4576941_4577259_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001728452.1\|4577218_4577347_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_023993550.1\|4577443_4579798_+\|tail	tail protein	A4JWL0	Burkholderia_virus	4.4e-65	30.4
WP_000271425.1\|4579797_4580751_+\|tail	phage tail protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_023993551.1\|4580750_4580960_+\|tail	tail protein X	A4JWL2	Burkholderia_virus	2.2e-16	60.3
WP_000818147.1\|4580947_4581991_+	phage late control D family protein	A4JWL3	Burkholderia_virus	1.9e-76	45.6
WP_000679393.1\|4582000_4582723_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_000593182.1\|4583050_4583413_+	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000703634.1\|4583409_4584339_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	6.7e-150	83.8
WP_058649929.1\|4584338_4585886_+	hypothetical protein	B9UDL6	Salmonella_phage	2.5e-48	29.9
WP_001093501.1\|4586049_4586409_+	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_023993552.1\|4586399_4587515_+\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	3.1e-101	52.2
WP_023993553.1\|4587507_4588140_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	8.6e-24	56.4
WP_023994534.1\|4588142_4589897_+\|tail	tail fiber protein	A0A0M3ULF6	Salmonella_phage	4.2e-52	52.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP016407

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

83028 : 160098

Tupanvirus(13.33%)

transposase,integrase

attL 148935:148949|attR 165938:165952

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088348988.1\|83028_84127_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.5e-47	42.2
WP_020833646.1\|84985_86101_-	DNA-binding protein	NA	NA	NA	NA
WP_020833650.1\|90380_91208_-	streptomycin 3''-kinase	NA	NA	NA	NA
WP_020833651.1\|91344_91530_+	hypothetical protein	NA	NA	NA	NA
WP_110613438.1\|92529_92829_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_020833652.1\|92765_93980_+	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_020833653.1\|94008_95307_-	transporter	NA	NA	NA	NA
WP_020833654.1\|95420_96617_-	methionine gamma-lyase	A0A0B5JD48	Pandoravirus	9.3e-27	28.4
WP_024143068.1\|97501_97759_+	hypothetical protein	NA	NA	NA	NA
WP_020833656.1\|98257_99046_+	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	2.8e-08	31.2
WP_020833657.1\|99381_101403_-	siderophore yersiniabactin receptor FyuA	NA	NA	NA	NA
WP_020833658.1\|101533_103111_-	yersiniabactin biosynthesis salycil-AMP ligase YbtE	A0A2K9KZV5	Tupanvirus	2.0e-08	22.8
WP_023994194.1\|103114_103918_-	yersiniabactin biosynthesis thioesterase YbtT	NA	NA	NA	NA
WP_023994193.1\|103914_105015_-	yersiniabactin biosynthesis oxidoreductase YbtU	NA	NA	NA	NA
WP_020833661.1\|105011_114509_-	yersiniabactin polyketide synthase HMWP1	D0R7J2	Paenibacillus_phage	1.6e-49	36.8
WP_020833662.1\|114596_120704_-	yersiniabactin non-ribosomal peptide synthetase HMWP2	A0A2K9KZV5	Tupanvirus	3.4e-40	28.2
WP_020833663.1\|120894_121854_-	yersiniabactin transcriptional regulator YbtA	NA	NA	NA	NA
WP_020833664.1\|122311_124024_+	yersiniabactin ABC transporter ATP-binding/permease protein YbtP	W8CYL7	Bacillus_phage	2.8e-32	27.4
WP_023994191.1\|124010_125813_+	yersiniabactin ABC transporter ATP-binding/permease protein YbtQ	W8CYL7	Bacillus_phage	2.7e-22	26.1
WP_020833666.1\|125805_127086_+	yersiniabactin-associated zinc MFS transporter YbtX	NA	NA	NA	NA
WP_020833667.1\|127113_128445_+	yersiniabactin biosynthesis salicylate synthase YbtS	NA	NA	NA	NA
WP_020833668.1\|129102_129402_+	hypothetical protein	NA	NA	NA	NA
WP_020833669.1\|129636_131124_+	PhoPQ-regulated protein	NA	NA	NA	NA
WP_020833670.1\|131208_132069_+	alpha/beta fold hydrolase	A2RQC8	Archaeal_BJ1_virus	5.9e-07	21.8
WP_077914832.1\|133150_133441_+	hypothetical protein	NA	NA	NA	NA
WP_023994189.1\|133443_134457_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJ76	Virus_Rctr85	4.4e-46	36.7
WP_139142178.1\|134882_135011_-	sugar porter family MFS transporter	NA	NA	NA	NA
WP_139142176.1\|134974_135142_-	hypothetical protein	NA	NA	NA	NA
WP_023994187.1\|136553_136856_-	hypothetical protein	NA	NA	NA	NA
WP_049885068.1\|139361_140750_-	MFS transporter	NA	NA	NA	NA
WP_023994181.1\|141077_141446_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_023994180.1\|141944_142970_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_023994221.1\|144377_145355_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.7e-74	59.9
WP_023994222.1\|145804_147142_-	arginine/agmatine antiporter	NA	NA	NA	NA
WP_023994223.1\|147380_148454_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_058649965.1\|148772_151040_-	arginine decarboxylase	NA	NA	NA	NA
148935:148949	attL	NA	NA	NA	NA
WP_023994225.1\|152726_153035_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	9.6e-29	68.6
WP_078024491.1\|155166_156018_+	3'-5' exoribonuclease	K7RFY5	Vibrio_phage	4.3e-26	37.3
WP_001067855.1\|158259_158964_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000845048.1\|159084_160098_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
165938:165952	attR	NA	NA	NA	NA

DBSCAN-SWA_2

236046 : 283685

Escherichia_phage(31.58%)

transposase,integrase

attL 229457:229471|attR 272991:273005

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
229457:229471	attL	NA	NA	NA	NA
WP_000038334.1\|236046_236961_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.7e-66	53.4
WP_001247862.1\|237025_237292_-	hypothetical protein	NA	NA	NA	NA
WP_000218863.1\|237384_237819_-	hypothetical protein	NA	NA	NA	NA
WP_000117627.1\|238547_239048_-	antirestriction protein ArdA	G9FHQ1	Rhodococcus_virus	1.9e-05	27.1
WP_000978005.1\|239510_240107_-	hypothetical protein	A0A0N7KZV3	Escherichia_phage	6.9e-15	60.3
WP_001276261.1\|240103_240823_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_000845898.1\|240819_241254_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_058649951.1\|241308_243267_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.6e-20	29.4
WP_000006024.1\|243325_243559_-	DUF905 domain-containing protein	A0A096XUX0	Cronobacter_phage	3.3e-05	53.3
WP_001276125.1\|243616_244144_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	1.6e-47	73.5
WP_001027516.1\|244914_245106_-	hypothetical protein	NA	NA	NA	NA
WP_000271741.1\|245102_245525_-	DUF1380 family protein	NA	NA	NA	NA
WP_001198941.1\|245571_245997_-	antirestriction protein	NA	NA	NA	NA
WP_072686770.1\|245969_246542_-	DUF1472 domain-containing protein	NA	NA	NA	NA
WP_000274421.1\|247229_247664_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001104873.1\|247677_247899_-	hypothetical protein	NA	NA	NA	NA
WP_000086137.1\|247899_248583_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.3e-30	36.9
WP_001330417.1\|248967_249870_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_000618110.1\|250287_250536_+	DinI-like family protein	Q2A098	Sodalis_phage	1.9e-14	48.0
WP_000109071.1\|250532_250970_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.3e-26	48.4
WP_000457496.1\|250969_252241_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	1.4e-142	60.5
WP_000340829.1\|252245_252638_-	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_001103690.1\|252642_253614_-	hypothetical protein	A0A222YXF2	Escherichia_phage	7.4e-67	42.9
WP_000633913.1\|253842_254487_+	AAA family ATPase	A0A222YXS3	Escherichia_phage	1.9e-39	43.0
WP_000239529.1\|254480_254756_+	hypothetical protein	NA	NA	NA	NA
WP_077249540.1\|254893_255679_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.6e-54	96.4
WP_000535297.1\|255723_256503_-	hypothetical protein	NA	NA	NA	NA
WP_001302628.1\|256555_256870_-	hypothetical protein	NA	NA	NA	NA
WP_000246635.1\|257550_258546_+	hypothetical protein	NA	NA	NA	NA
WP_000991830.1\|258549_259482_+	hypothetical protein	NA	NA	NA	NA
WP_000952231.1\|259779_260868_+	hypothetical protein	NA	NA	NA	NA
WP_000253407.1\|260869_261739_+	hypothetical protein	NA	NA	NA	NA
WP_000741348.1\|261795_263361_-	ATP-binding protein	NA	NA	NA	NA
WP_001261287.1\|263668_263899_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001044768.1\|263895_264312_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_075322282.1\|264473_266612_-	AAA family ATPase	NA	NA	NA	NA
WP_000343085.1\|266965_267223_+	hypothetical protein	NA	NA	NA	NA
WP_000194575.1\|267222_267813_+	hypothetical protein	NA	NA	NA	NA
WP_058649952.1\|268075_269632_+	AAA family ATPase	NA	NA	NA	NA
WP_000521603.1\|269822_270440_+	hypothetical protein	NA	NA	NA	NA
WP_044502555.1\|270732_271770_-	permease	NA	NA	NA	NA
WP_001175594.1\|271874_272198_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024159726.1\|272298_273009_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	3.1e-94	72.5
272991:273005	attR	NA	NA	NA	NA
WP_001286342.1\|273017_273563_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_011117603.1\|273638_274001_+	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_023171140.1\|274027_275779_+	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_011117601.1\|275852_276221_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001067858.1\|276407_277112_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001067858.1\|277693_278398_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_013188475.1\|279351_280227_+	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
WP_013362812.1\|280261_281230_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.6e-186	100.0
WP_001067855.1\|282980_283685_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP016406

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP016407

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection