CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018888	Lactobacillus amylophilus DSM 20533 = JCM 1125 strain DSM 20533 chromosome, complete genome	1 crisprs	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh,DinG	0	16	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018888_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018888_1

1015304-1018503

TypeI-E

I-C,I-E,II-B

Consensus_repeat	Method
GTTTTCCCCGCACAGGCGGGGGTGATCC	PILER-CR
GTTTTCCCCGCACAGGCGGGGGTGATCC	CRISPRCasFinder
GTTTTCCCCGCACAGGCGGGGGTGATCC	CRT

52 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP018888_1

>merge|NZ_CP018888|1|1015304-1018503|PILER-CR,CRISPRCasFinder,CRT
GTTTTCCCCGCACAGGCGGGGGTGATCCTATTGCAAAGACCGCTACTGAAGCGCGGCCGGTGTTTTCCCCGCACAGGCGGGGGTGATCCTGTTGTAAAAGCTAACGCCGTTAATAGGTTAGAGTTTTCCCCGCACAGGCGGGGGTGATCCCGGCGCCGGCTACTATGTATACTTTGAACCGTTGTTTTCCCCGCACAGGCGGGGGTGATCCCGGTAGACCAAGTTATTATTTTGGTGAAAAAGGGTTTTCCCCGCACAGGCGGGGGTGATCCCGCGGTAGGCCGTGCTAGGTATGACAACGGCGCGTTTTCCCCGCACAGGCGGGGGTGATCCTCTCATAGTGCCCGTTTTTCTTATATATTGCTTGTTTTCCCCGCACAGGCGGGGGTGATCCTCTCCACCACTCGCTTAAACTTCGTCTCATCACGTTTTCCCCGCACAGGCGGGGGTGATCCCACTAAAAGCAGTCCCGGTACCATAAGATATTGGTTTTCCCCGCACAGGCGGGGGTGATCCTTGTATTATATAAATATAGAAGAGAGCAGGAGAGTTTTCCCCGCACAGGCGGGGGTGATCCCCATTCCTCCAAAACGAAAAATGGTCGGAGTTCGTTTTCCCCGCACAGGCGGGGGTGATCCTACATGGTTTTCACAAACTCATACATTGTTCTCGTTTTCCCCGCACAGGCGGGGGTGATCCTATGTTACGCCATCATCAATATCATCAGGGAACGTTTTCCCCGCACAGGCGGGGGTGATCCTAGTAAGGGCATCGTCAGAGCTCGCAAAGATGGGTTTTCCCCGCACAGGCGGGGGTGATCCTCTTTTTAGCCAATTGCACTTGCGTAATGCGTTGTTTTCCCCGCACAGGCGGGGGTGATCCTCAACATTAACCTTAATCTTTGTCATTTAAAGCGTTTTCCCCGCACAGGCGGGGGTGATCCCACTCAGGAGTACCTAATAAAACAGATTAGTCCGTTTTCCCCGCACAGGCGGGGGTGATCCTTATCCACGGGCGTTGCGTTGTCATCAGGATTAGTTTTCCCCGCACAGGCGGGGGTGATCCCAGGCTTGTTATTTAAGGGGGTTGGTTGGCTATGTTTTCCCCGCACAGGCGGGGGTGATCCTACTGATTTGTCTTGTGGCGTTATCAGCGTTGCGTTTTCCCCGCACAGGCGGGGGTGATCCTTTATCAAAGAGGTACCCACAAAGAGAGGATGAGTTTTCCCCGCACAGGCGGGGGTGATCCTTAAAAAGGCAAACCTCAATCTGGAGGTTAAAAGTTTTCCCCGCACAGGCGGGGGTGATCCTAATTTCTGTCAAACAATTTATATTAGTTGTTGGTTTTCCCCGCACAGGCGGGGGTGATCCTTCATGAGGGTGTAGACCGTTCGACAGTCAATGGTTTTCCCCGCACAGGCGGGGGTGATCCTCATTTCATCTTGGCAGGCTCTGCAGGCTTGATGTTTTCCCCGCACAGGCGGGGGTGATCCTTGTCTTCCCCCCTTGGCGTAATTTTGAAGTTTGTTTTCCCCGCACAGGCGGGGGTGATCCTGCCGCATCGACATCTACCTTGTTTTGCGTAATGTTTTCCCCGCACAGGCGGGGGTGATCCCACTAGTGGTTCTTGTAATGGTAGCTTGACCGAGTTTTCCCCGCACAGGCGGGGGTGATCCTAAATAATTTCCTCTACTCTATCAGACGTCTGTGTTTTCCCCGCACAGGCGGGGGTGATCCCCATCGCTTCCTATTATACTTTTAACACCATCGGTTTTCCCCGCACAGGCGGGGGTGATCCTGATACATTGAACCCGTCTGATTTAATGAAACAGTTTTCCCCGCACAGGCGGGGGTGATCCCATGGTCGTTTTAACGGCGGACGCCGTTATCGAGTTTTCCCCGCACAGGCGGGGGTGATCCTAATTCCTTTAAATCGTTATAGCCCGTGTAGTCGTTTTCCCCGCACAGGCGGGGGTGATCCTTGCTAATCCATGGCATATCAATACCGACAATTGTTTTCCCCGCACAGGCGGGGGTGATCCCTAGTATCTAAACCATAGTAGTTTAGTGTTTTCGTTTTCCCCGCACAGGCGGGGGTGATCCTAGATATTGTAAGAGAGATAGAGAGAGGGAGAAGTTTTCCCCGCACAGGCGGGGGTGATCCCGTAGCTTAAAACCTGCTGAATAGTGCCAGACCGTTTTCCCCGCACAGGCGGGGGTGATCCTCAAGTTAAAAGCTGATGGTTCAAAGGTGGATAGTTTTCCCCGCACAGGCGGGGGTGATCCTCCGCGCAATGATTTAACAGGTGCAGAGGTTAAGTTTTCCCCGCACAGGCGGGGGTGATCCTCATACGGGCCGGCGTGTGTGTAGTCGCGCGGGGTTTTCCCCGCACAGGCGGGGGTGATCCTCATGATAATTCAAAAGTTTTTGAAATGTTTACGTTTTCCCCGCACAGGCGGGGGTGATCCCTCCAACTAAAAATTGGATTATCGGAGTTAAAAGTTTTCCCCGCACAGGCGGGGGTGATCCTCAGGGGTCTAGCAGCAAAGCCACGGCTCAGTAGTTTTCCCCGCACAGGCGGGGGTGATCCTCGCCAGAGCATTTCTAATTTTCGTGTTGGCAGGTTTTCCCCGCACAGGCGGGGGTGATCCCAGCAAGCAAGGCTATTATCGACTATGCGTTTAGTTTTCCCCGCACAGGCGGGGGTGATCCTTACAACCGCTTTTACGGCATTTATGCATAATCGTTTTCCCCGCACAGGCGGGGGTGATCCTAAGTGTTCGATAAATTTACCTAGATTTTCAAAGTTTTCCCCGCACAGGCGGGGGTGATCCTTGTGCTAGGCTGGTTGCAGATATTTGTAAGCGGTTTTCCCCGCACAGGCGGGGGTGATCCTACCGCCCACTTGATGATGTGATATGCCTTGTCGTTTTCCCCGCACAGGCGGGGGTGATCCTCCACTCAACACCACCAATTCTGCCTTGCACGAGTTTTCCCCGCACAGGCGGGGGTGATCCTATTCATTATCTTGCCATGTGTAATATGCATCAGTTTTCCCCGCACAGGCGGGGGTGATCCTAGCACAGTATAAATAATTAGGAGGTCATTCAAGTTTTCCCCGCACAGGCGGGGGTGACTGATCAAGTTGAGTGATAAATTTGCGGTTTTCAATGTTTTCCCCGTACAGGCGGGGGTGATCC

>NZ_CP018888|1|1|1015304-1018503|PILER-CR
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATTGCAAAGACCGCTACTGAAGCGCGGCCGGT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGTTGTAAAAGCTAACGCCGTTAATAGGTTAGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGGCGCCGGCTACTATGTATACTTTGAACCGTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGGTAGACCAAGTTATTATTTTGGTGAAAAAGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGCGGTAGGCCGTGCTAGGTATGACAACGGCGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTCATAGTGCCCGTTTTTCTTATATATTGCTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTCCACCACTCGCTTAAACTTCGTCTCATCAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTAAAAGCAGTCCCGGTACCATAAGATATTG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTATTATATAAATATAGAAGAGAGCAGGAGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CCATTCCTCCAAAACGAAAAATGGTCGGAGTTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACATGGTTTTCACAAACTCATACATTGTTCTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATGTTACGCCATCATCAATATCATCAGGGAAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGTAAGGGCATCGTCAGAGCTCGCAAAGATGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTTTTTAGCCAATTGCACTTGCGTAATGCGTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAACATTAACCTTAATCTTTGTCATTTAAAGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTCAGGAGTACCTAATAAAACAGATTAGTCC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTATCCACGGGCGTTGCGTTGTCATCAGGATTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CAGGCTTGTTATTTAAGGGGGTTGGTTGGCTAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACTGATTTGTCTTGTGGCGTTATCAGCGTTGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTTATCAAAGAGGTACCCACAAAGAGAGGATGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTAAAAAGGCAAACCTCAATCTGGAGGTTAAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAATTTCTGTCAAACAATTTATATTAGTTGTTG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTCATGAGGGTGTAGACCGTTCGACAGTCAATG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATTTCATCTTGGCAGGCTCTGCAGGCTTGAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTCTTCCCCCCTTGGCGTAATTTTGAAGTTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGCCGCATCGACATCTACCTTGTTTTGCGTAAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTAGTGGTTCTTGTAATGGTAGCTTGACCGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAAATAATTTCCTCTACTCTATCAGACGTCTGT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CCATCGCTTCCTATTATACTTTTAACACCATCG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGATACATTGAACCCGTCTGATTTAATGAAACA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CATGGTCGTTTTAACGGCGGACGCCGTTATCGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAATTCCTTTAAATCGTTATAGCCCGTGTAGTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGCTAATCCATGGCATATCAATACCGACAATT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CTAGTATCTAAACCATAGTAGTTTAGTGTTTTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGATATTGTAAGAGAGATAGAGAGAGGGAGAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGTAGCTTAAAACCTGCTGAATAGTGCCAGACC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAAGTTAAAAGCTGATGGTTCAAAGGTGGATA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCCGCGCAATGATTTAACAGGTGCAGAGGTTAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATACGGGCCGGCGTGTGTGTAGTCGCGCGGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATGATAATTCAAAAGTTTTTGAAATGTTTAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CTCCAACTAAAAATTGGATTATCGGAGTTAAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAGGGGTCTAGCAGCAAAGCCACGGCTCAGTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCGCCAGAGCATTTCTAATTTTCGTGTTGGCAG
GTTTTCCCCGCACAGGCGGGGGTGATCC	CAGCAAGCAAGGCTATTATCGACTATGCGTTTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTACAACCGCTTTTACGGCATTTATGCATAATC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAAGTGTTCGATAAATTTACCTAGATTTTCAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTGCTAGGCTGGTTGCAGATATTTGTAAGCG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACCGCCCACTTGATGATGTGATATGCCTTGTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCCACTCAACACCACCAATTCTGCCTTGCACGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATTCATTATCTTGCCATGTGTAATATGCATCA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGCACAGTATAAATAATTAGGAGGTCATTCAA
GTTTTCCCCGCACAGGCGGGGGTGACTG	ATCAAGTTGAGTGATAAATTTGCGGTTTTCAATGTT
TTCCCCGTACAGGCGGGGGTGATCC

>NZ_CP018888|1|1|1015304-1018503|CRISPRCasFinder
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATTGCAAAGACCGCTACTGAAGCGCGGCCGGT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGTTGTAAAAGCTAACGCCGTTAATAGGTTAGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGGCGCCGGCTACTATGTATACTTTGAACCGTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGGTAGACCAAGTTATTATTTTGGTGAAAAAGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGCGGTAGGCCGTGCTAGGTATGACAACGGCGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTCATAGTGCCCGTTTTTCTTATATATTGCTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTCCACCACTCGCTTAAACTTCGTCTCATCAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTAAAAGCAGTCCCGGTACCATAAGATATTG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTATTATATAAATATAGAAGAGAGCAGGAGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CCATTCCTCCAAAACGAAAAATGGTCGGAGTTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACATGGTTTTCACAAACTCATACATTGTTCTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATGTTACGCCATCATCAATATCATCAGGGAAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGTAAGGGCATCGTCAGAGCTCGCAAAGATGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTTTTTAGCCAATTGCACTTGCGTAATGCGTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAACATTAACCTTAATCTTTGTCATTTAAAGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTCAGGAGTACCTAATAAAACAGATTAGTCC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTATCCACGGGCGTTGCGTTGTCATCAGGATTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CAGGCTTGTTATTTAAGGGGGTTGGTTGGCTAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACTGATTTGTCTTGTGGCGTTATCAGCGTTGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTTATCAAAGAGGTACCCACAAAGAGAGGATGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTAAAAAGGCAAACCTCAATCTGGAGGTTAAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAATTTCTGTCAAACAATTTATATTAGTTGTTG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTCATGAGGGTGTAGACCGTTCGACAGTCAATG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATTTCATCTTGGCAGGCTCTGCAGGCTTGAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTCTTCCCCCCTTGGCGTAATTTTGAAGTTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGCCGCATCGACATCTACCTTGTTTTGCGTAAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTAGTGGTTCTTGTAATGGTAGCTTGACCGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAAATAATTTCCTCTACTCTATCAGACGTCTGT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CCATCGCTTCCTATTATACTTTTAACACCATCG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGATACATTGAACCCGTCTGATTTAATGAAACA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CATGGTCGTTTTAACGGCGGACGCCGTTATCGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAATTCCTTTAAATCGTTATAGCCCGTGTAGTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGCTAATCCATGGCATATCAATACCGACAATT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CTAGTATCTAAACCATAGTAGTTTAGTGTTTTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGATATTGTAAGAGAGATAGAGAGAGGGAGAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGTAGCTTAAAACCTGCTGAATAGTGCCAGACC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAAGTTAAAAGCTGATGGTTCAAAGGTGGATA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCCGCGCAATGATTTAACAGGTGCAGAGGTTAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATACGGGCCGGCGTGTGTGTAGTCGCGCGGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATGATAATTCAAAAGTTTTTGAAATGTTTAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CTCCAACTAAAAATTGGATTATCGGAGTTAAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAGGGGTCTAGCAGCAAAGCCACGGCTCAGTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCGCCAGAGCATTTCTAATTTTCGTGTTGGCAG
GTTTTCCCCGCACAGGCGGGGGTGATCC	CAGCAAGCAAGGCTATTATCGACTATGCGTTTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTACAACCGCTTTTACGGCATTTATGCATAATC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAAGTGTTCGATAAATTTACCTAGATTTTCAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTGCTAGGCTGGTTGCAGATATTTGTAAGCG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACCGCCCACTTGATGATGTGATATGCCTTGTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCCACTCAACACCACCAATTCTGCCTTGCACGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATTCATTATCTTGCCATGTGTAATATGCATCA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGCACAGTATAAATAATTAGGAGGTCATTCAA
GTTTTCCCCGCACAGGCGGGGGTGACTG	ATCAAGTTGAGTGATAAATTTGCGGTTTTCAAT
GTTTTCCCCGTACAGGCGGGGGTGATCC

>NZ_CP018888|1|1|1015304-1018503|CRT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATTGCAAAGACCGCTACTGAAGCGCGGCCGGT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGTTGTAAAAGCTAACGCCGTTAATAGGTTAGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGGCGCCGGCTACTATGTATACTTTGAACCGTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGGTAGACCAAGTTATTATTTTGGTGAAAAAGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGCGGTAGGCCGTGCTAGGTATGACAACGGCGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTCATAGTGCCCGTTTTTCTTATATATTGCTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTCCACCACTCGCTTAAACTTCGTCTCATCAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTAAAAGCAGTCCCGGTACCATAAGATATTG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTATTATATAAATATAGAAGAGAGCAGGAGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CCATTCCTCCAAAACGAAAAATGGTCGGAGTTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACATGGTTTTCACAAACTCATACATTGTTCTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATGTTACGCCATCATCAATATCATCAGGGAAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGTAAGGGCATCGTCAGAGCTCGCAAAGATGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCTTTTTAGCCAATTGCACTTGCGTAATGCGTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAACATTAACCTTAATCTTTGTCATTTAAAGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTCAGGAGTACCTAATAAAACAGATTAGTCC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTATCCACGGGCGTTGCGTTGTCATCAGGATTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CAGGCTTGTTATTTAAGGGGGTTGGTTGGCTAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACTGATTTGTCTTGTGGCGTTATCAGCGTTGC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTTATCAAAGAGGTACCCACAAAGAGAGGATGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTAAAAAGGCAAACCTCAATCTGGAGGTTAAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAATTTCTGTCAAACAATTTATATTAGTTGTTG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTCATGAGGGTGTAGACCGTTCGACAGTCAATG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATTTCATCTTGGCAGGCTCTGCAGGCTTGAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTCTTCCCCCCTTGGCGTAATTTTGAAGTTT
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGCCGCATCGACATCTACCTTGTTTTGCGTAAT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CACTAGTGGTTCTTGTAATGGTAGCTTGACCGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAAATAATTTCCTCTACTCTATCAGACGTCTGT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CCATCGCTTCCTATTATACTTTTAACACCATCG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TGATACATTGAACCCGTCTGATTTAATGAAACA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CATGGTCGTTTTAACGGCGGACGCCGTTATCGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAATTCCTTTAAATCGTTATAGCCCGTGTAGTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGCTAATCCATGGCATATCAATACCGACAATT
GTTTTCCCCGCACAGGCGGGGGTGATCC	CTAGTATCTAAACCATAGTAGTTTAGTGTTTTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGATATTGTAAGAGAGATAGAGAGAGGGAGAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	CGTAGCTTAAAACCTGCTGAATAGTGCCAGACC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAAGTTAAAAGCTGATGGTTCAAAGGTGGATA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCCGCGCAATGATTTAACAGGTGCAGAGGTTAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATACGGGCCGGCGTGTGTGTAGTCGCGCGGG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCATGATAATTCAAAAGTTTTTGAAATGTTTAC
GTTTTCCCCGCACAGGCGGGGGTGATCC	CTCCAACTAAAAATTGGATTATCGGAGTTAAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCAGGGGTCTAGCAGCAAAGCCACGGCTCAGTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCGCCAGAGCATTTCTAATTTTCGTGTTGGCAG
GTTTTCCCCGCACAGGCGGGGGTGATCC	CAGCAAGCAAGGCTATTATCGACTATGCGTTTA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTACAACCGCTTTTACGGCATTTATGCATAATC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAAGTGTTCGATAAATTTACCTAGATTTTCAAA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TTGTGCTAGGCTGGTTGCAGATATTTGTAAGCG
GTTTTCCCCGCACAGGCGGGGGTGATCC	TACCGCCCACTTGATGATGTGATATGCCTTGTC
GTTTTCCCCGCACAGGCGGGGGTGATCC	TCCACTCAACACCACCAATTCTGCCTTGCACGA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TATTCATTATCTTGCCATGTGTAATATGCATCA
GTTTTCCCCGCACAGGCGGGGGTGATCC	TAGCACAGTATAAATAATTAGGAGGTCATTCAA
GTTTTCCCCGCACAGGCGGGGGTGACTG	ATCAAGTTGAGTGATAAATTTGCGGTTTTCAAT
GTTTTCCCCGTACAGGCGGGGGTGATCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018888.1\|WP_056947149.1\|1012789_1013440_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NZ_CP018888.1\|WP_056947156.1\|1010997_1012074_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP018888.1\|WP_056947165.1\|1003457_1005236_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|273816
NZ_CP018888.1\|WP_056947141.1\|1020051_1020480_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP018888.1\|WP_056947132.1\|1021328_1021730_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|374224
NZ_CP018888.1\|WP_054745647.1\|1018959_1019697_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP018888.1\|WP_082611601.1\|1005867_1008687_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP018888.1\|WP_056947127.1\|1025763_1027575_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP018888.1\|WP_056947130.1\|1022455_1024858_+\|phosphoenolpyruvate-synthase	unknown	unknown	gnl\|CDD\|235809
NZ_CP018888.1\|WP_082611600.1\|1024992_1025562_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|226489
NZ_CP018888.1\|WP_156849157.1\|1005393_1005750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018888.1\|WP_056947160.1\|1008679_1010395_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
NZ_CP018888.1\|WP_054745645.1\|1019699_1019906_-\|DUF1211-domain-containing-protein	unknown	unknown	gnl\|CDD\|377696
NZ_CP018888.1\|WP_054745634.1\|1021776_1021968_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|224638
NZ_CP018888.1\|WP_056947152.1\|1012054_1012774_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP018888.1\|WP_056947158.1\|1010384_1011008_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NZ_CP018888.1\|WP_056947137.1\|1020605_1020863_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274230
NZ_CP018888.1\|WP_056947146.1\|1014390_1015275_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|378244
NZ_CP018888.1\|WP_056947134.1\|1020867_1021188_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018888.1\|WP_054745649.1\|1013442_1014387_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693

Protein	Function_ID	Function_description	E-value
NZ_CP018888.1\|WP_056947149.1\|1012789_1013440_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.42432e-73
NZ_CP018888.1\|WP_056947156.1\|1010997_1012074_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.17712e-149
NZ_CP018888.1\|WP_056947165.1\|1003457_1005236_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|273816	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport].	5.4908e-60
NZ_CP018888.1\|WP_056947141.1\|1020051_1020480_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.03848e-11
NZ_CP018888.1\|WP_056947132.1\|1021328_1021730_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	3.12042e-11
NZ_CP018888.1\|WP_054745647.1\|1018959_1019697_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.75209e-24
NZ_CP018888.1\|WP_082611601.1\|1005867_1008687_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.11042e-80
NZ_CP018888.1\|WP_056947130.1\|1022455_1024858_+\|phosphoenolpyruvate-synthase	gnl\|CDD\|235809	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated.	0
NZ_CP018888.1\|WP_082611600.1\|1024992_1025562_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|226489	COG3981, COG3981, Predicted acetyltransferase [General function prediction only].	1.17583e-32
NZ_CP018888.1\|WP_056947127.1\|1025763_1027575_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP018888.1\|WP_054745645.1\|1019699_1019906_-\|DUF1211-domain-containing-protein	gnl\|CDD\|377696	pfam06736, DUF1211, Protein of unknown function (DUF1211). This family represents a conserved region within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. These may possibly be integral membrane proteins.	4.88649e-11
NZ_CP018888.1\|WP_056947160.1\|1008679_1010395_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	3.17589e-79
NZ_CP018888.1\|WP_054745634.1\|1021776_1021968_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|224638	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family [General function prediction only].	1.31024e-13
NZ_CP018888.1\|WP_056947152.1\|1012054_1012774_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.82456e-47
NZ_CP018888.1\|WP_056947158.1\|1010384_1011008_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	7.75937e-27
NZ_CP018888.1\|WP_056947137.1\|1020605_1020863_+\|hypothetical-protein	gnl\|CDD\|274230	TIGR02609, hypothetical_protein_XAC1195, putative addiction module antidote. Members of this protein family are putative addiction module antidote proteins that appear recurringly in two-gene operons with members of the Doc (death-on-curing) family TIGR01550. Members of this family contain a SpoVT/AbrB-like domain (pfam04014). Note that the gene pairs with a member of this family tend to be found on bacterial chromosomes, not on plasmids. [Mobile and extrachromosomal element functions, Other].	0.000290005
NZ_CP018888.1\|WP_056947146.1\|1014390_1015275_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.98433e-36
NZ_CP018888.1\|WP_054745649.1\|1013442_1014387_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.65745e-122

>NZ_CP018888.1|WP_056947146.1|1014390_1015275_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MIVITLTSVPPALRGELSKWCQEIQVGIFVGNPSARIRDLLWDKIVDNVGQGRATMAFNARNEFGYQFRTTNRYYEVRDYDGIPLLVKVKDATPLIKVGYSDAAKFRRAAKFSKQKQRSEPPDVSFVAIDIETTGLEPDTDKIIAIGMVKINHGVADNPKQILIKIDEPLSDEIIKLTGYTNKWLETEGVDIVSALSRFVDTVENLPIIGFNVNFDINFINKNLIENGMLKVENEITDLRTVVKKNELFLNNYRLETVLAKYGIENINPHHAESDALATAKLADQLIKNSLLYF
>NZ_CP018888.1|WP_054745649.1|1013442_1014387_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MVEIGRKKPNVSELSRISDRVSFLYLEHVKINRRDNAILVTDEQATVLVPAAIISVLLLGPGVDVTHRAMELIGDLGASVVWVGERGVRQYAHGRALSHSTVLLQEQARLVSNSKMRVSVARKMYQLRFPNEDVSKLTMQELRGKEGARVRKIYANSSKTTGVAWDKRQYNPDDFTSGTPINQALTAANVALYGLSYSVVAALGLSPGLGFVHTGNDLSFIYDFADLYKGEYSIPIAFNVVKNLQPDDDIGRITRLAMRDAFVDGKLMVRMVKDLKYLFNTKEIERIESDVLNLWDDKEGLQKFGVAYDLRTED
>NZ_CP018888.1|WP_056947149.1|1012789_1013440_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRVQVDTNNRRKLKTLTHLGAYHNWVEQAFPNEVANGERGRHLWRIDRLKGDEYLLVLSEEKPDLNLLECFGKKGTAESKNYDSFLNSIVNGQSAYFRLTANPTISIPKPGQPRGTVYPILANAKQRAWLIKKSDSNGFKLNDDPLGDYAFDVVEREFSNLYHGHNNKVRISRVTFEGLLTVTDAEKFKLALTKGIGREKAYGMGLLTIIPEA
>NZ_CP018888.1|WP_056947152.1|1012054_1012774_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKTVTIRLAGLLQSYGSEANFNYRTTLGYPSKSAVIGMIAAAFGYERDNPAINRLNNLAFAVRIDQPGRALQDFQMVHMQKGKQIQSKITYRDYLQDAVFVVAIGSEDSELIEKIQYSLRHPRFSLFLGRRANVPGGMLQTKVYEDTTPINILDSLQWQAAKWFQKKQKKQDKVQVDIVADANLLPDQRYYLQKDKVVSFSQKSRQFEFRRIAEKSIELINPQFEKLGWDTEHDIMNFL
>NZ_CP018888.1|WP_056947156.1|1010997_1012074_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MQNKNLYIDIHVLQSVPAANINRDDAGSPKTVYYGGTLRSRVSSQSWKNAMRADFNLNPLSDNLGIRSKKVLARLAKLLVDQKADISLEDAQKMAEKALDTIGVKKSTDTLLFISQWQLNNLVKLILSEEGLEQFDKKELKKAFMENNSLDLALFGRMVATNPELNVEGASQVAHAFSTHEIVPEFDFYTGRDDLQEENNAGAGMMGTIEYNSSTLYRYANVNVRELSENLQGEQLTESIEKFVQSFILSMPTGKQNSYANKTLPNYVLVTIRDDTPVNLASAFEEPVKSKSGYLTQSIKKLEQEFTETEAFVDKPVKTLVLTTKESSISQRTNSLNELLNQVAQTIVEVGSYEDSNN
>NZ_CP018888.1|WP_056947158.1|1010384_1011008_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MPNKIRNKADRIITAIQADAKPDKGALAALRTSKSITDPGATVVWPYILANLDEQDLSRTGTPTREEIAVYTAIRLYAIYQQGVEQLLYTPYYKRNDGDKTLTLFQAMAGIQNAGDDSTALRRQITQVLATTNFETTINSLTRLVGVLKGKKTGAVVDFAQLAEDIFWYQTGYKSANKVRLQWGQDFYRSFDQLEKMTNQEENNNAK
>NZ_CP018888.1|WP_056947160.1|1008679_1010395_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDRKSYNLLTEPWIKVLAKDSGDTVSVSLIDVLQNARQYERLAGEMRVQDFAIMRILLAILTTVYSRFDAQGEGYNWLDYDSNGYQVTRVKIFEDDQRQELLDSWNQTFTSGSFSRKVFDYLNEYSNRFDFLGEHPFMQVTHDEYNSLVSADKKIEKGSGQVLIKQINRSISESGNTSFVFSPKSNDEKDKIDLPELVRWVITYQGLTGVTDKTKVQSKEKYSISPGWLFQISPVFIRGSDLFQTLMLNLLLFNPNHQGEFNLQKPIWEETNLLSYAELRLSNIFPNDIAGLYTSLSRMLHISWKDEGPQIFSAGLPKLDIEQNPFEPMTTWKKNKDKKRNIDFVPAVKSKWSISKAMWRDFGQYVGTDYSGNEVEPGIIAWLRQLKNNGYIDDSFHVNVSSVSFINDGNATSQLPVEEIHGELSLYADVLFDDDIAGRWTVRIEKIVEQIENVGKMYYGFLSNINGLEGGKGQASDHEMGQFYDLLNQPFESWLNNIHADDNRDMKELEWRKTLWELVQNLAKSQMDSATSKVIRGKVEDQVQTNIFTIYNSFMRRVWNSLELEVFKNAK
>NZ_CP018888.1|WP_082611601.1|1005867_1008687_+|CRISPR-associated-helicase/endonuclease-Cas3
MGKKYTEFIKKLGGVLLNCDNLDPKVAALWAKKGTSSTGEPVWLPLLAHLIDTANVINALYNHCLSDGQRALLVSDGQDEESVRQTIQFIGFIHDLGKATAVFERKQSYDHNAELDQAVLEHLIRAGFTGLDTAVIAHKNESPHARAGEALLEKFGVSSTIGAIIGGHHGKPEKGPPKNDICDFTANYFQDDGNKLIQQKWQDVQKEILEFGLNYVGLNSVQELADFSQKQSVIVEGLLIMADWLASSEYLENNRSDHPLFPLIAVDETIANIDFDTRFKNAWLAWTTTDEPILQQIKTSNDPYFDFWHFHARKFQTLVTEAIDKAVDPSLVIIEAPMGAGKTEISLVAAQQLAFRQGEMGLYYGLPTQATSNAMFERIKDWLDQQSKKSGLKNSIKLMHGRAEFNESYRALPNATGVDNQSGAVVNSWFSGKKSILDEYVVGTIDNLLLFALKQKHLALRHLGMSRKVVVIDEVHAYDTYMNVYLDRALEWLGAYHVPVVMLSATLPAARRRDLVLKYYKGRFGAKKYLEEKEATNSWQKNIAYPLVTLLDGDRVQQFSETPTPEQRKQVEVELMSDELADLVSSVLEKTADGGVVGVIVNTVARAQAIGYELDGKAPTLVLHSAFVATERTKIENELLEKIGKNGQRPEKLVIIGTQVLEQSLDIDFDILYTDLAPMDLILQRVGRLQRHQNKRPKQLSTPQLVVMDGSFSHLGEFNEGSEAIYGRYLLMKTRYYLPQVLNIPADIPRLTQLVYDEVDDALNGEIDGLQEAKKKEAQVSAELEKKAGVYPIDPPSYVRNKSIHGWLDNPKAIFDDEMASRSVRNIVQDSIEVLVLKKDSEGQIFLLDGTKIVNENLHIQAKAIAMQILRLTVSSYKIIDTIKILEKFTRSQFPDWADNKWLRGALAIVLDEQNEVEVGGVRYRYSTKFGLTKERING
>NZ_CP018888.1|WP_156849157.1|1005393_1005750_+|hypothetical-protein
MMPITSASLKYTFDIDNIDKPSASSEIGMLIEEEYFYRFGLETSNRVSEIYYSKCLHSVILGDGDSIGKLDWAKPLFAYANKHHLRPTGKLLTSLIFVNIDQVTGKTVCCDEVWLPLK
>NZ_CP018888.1|WP_056947165.1|1003457_1005236_+|FAD-dependent-oxidoreductase
MTEYRATSKGFHNEITAVVNVEDGKLTSVRAENVSDRTIGAVGIETWLNKANAEGSVEVDAISGASISTGALRSAAQAAFASATGQETDAVSGASQQQVGTKTGRPAPANYPLLKSRVYSKDVNYIGSYDVIVVGSGGAGLAAAATAAENNAQVLVIEKAGIAGGTTNYSGGVLQAAGTKWQKEFTKDESDTPERHEAEYMKTGEGRLYRDLVHDFTQNAPANMEWLAKMGVQWTGVYGHTTIPYATEDFAERIHISDNGGGAGDGIMLTQHLLKYALSLGAQIRYNTAVIGLIEADEHNHAVTGVVVSDGRNLEYLEARRGVVLATASVDQNVELAKDLSPQHYADVSAHRCWSVKTDRGDGIVLGMKLGAAVTGFGGTIDFDARTGNGTNNQIPTIPSIFVNGNGLRFVNEEATYAYVFREIFNEEKKLNKPTYQIFGRNALEEPASPFKSDTIDADIEKGLVVQAESVEDLAEKIGIPATNLKRSIDNWNENVANGRDGEYQRTVGLASISGPYYAYRNTPGNLGAIGGLKINVNCNVLDLFNQPITGLYAAGLNAGGWIGSYYPGSGTAIGGIIHQGRRAAKSILGLN
>NZ_CP018888.1|WP_054745647.1|1018959_1019697_-|class-I-SAM-dependent-methyltransferase
MKENIYDNEQFFEKYSHFPRSVAGLSAAGEWHELKKLLPDFHGKRVLDIGCGFGWHCMYAAENGAETVLGTDISSKMLAVVNEKNTFDNVHYQQIAMEDIDFAPNSFDVVMSSLAFHYTPDFRAICERISHCLTVGGQLIFSVEHPVFTAFGTQDWIYDEDGKPKYWPVDHYFTDGKRNAVFLGESVVKYHKTLTTYLNTLLQTGFTITGIVEPEPGAELLDTVPGMRDELRRPMMLLVSATKAA
>NZ_CP018888.1|WP_054745645.1|1019699_1019906_-|DUF1211-domain-containing-protein
MEKLKERMDFFSDAVMAIIITIMVLELTLPTSNTAAAYLQFGKSIGRPICSKHWPSFSKMSTRNNNGE
>NZ_CP018888.1|WP_056947141.1|1020051_1020480_+|GNAT-family-N-acetyltransferase
MIIRPVKPEDVRAITKLNYDELHYDYTVEHTAQMLEEVLARPWLKINVAEVDGQFAGYIQLAEYISLINEKLVNVMELAVVHEFQGQGVGSQLVKTAEEWSHELGFAGVRLNSGAERTSAHEFYEHNGFTKVKYQAKFEKKF
>NZ_CP018888.1|WP_056947137.1|1020605_1020863_+|hypothetical-protein
MAKRNQLKVRKVGNSLGAIIPKNWEVSEGDILHYEVSQNKIIIDRYESDLEHDRRVIDEGFKDFEKGLIVDNERLKKEFGKYGWK
>NZ_CP018888.1|WP_056947134.1|1020867_1021188_+|hypothetical-protein
MEEEKLELVMTDGFLTSLQSLVQDWEEVGLTEEKISEYVVLIQSSLESLKCFPRRFADVSGTFGFSMETRRIQIGRLYAIFYRIDQEKEYLLIGPIYHQRQLRQKF
>NZ_CP018888.1|WP_056947132.1|1021328_1021730_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKRLVTYAAVLDDSENKPNEYTVTFPDIPGAITDGQGLSEALNNAEEVLGLMLFDQNPLPAATDIKDIQAQHSNATVSYITTDLEQAKKEVHVPLVKKNTTIPADLAREAEKQGINFSAVLTAALKERLGIKS
>NZ_CP018888.1|WP_054745634.1|1021776_1021968_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MEHKVTEVLKILQNAGFTEDRIRGSHHRFKYSHGHYVSVAYDKPGKTIPIKTYNSILRQAGIK
>NZ_CP018888.1|WP_056947130.1|1022455_1024858_+|phosphoenolpyruvate-synthase
MSNRDTTNVLWFDELHREDVNLVGGKSSSLGEMTSAMSVPVPYGFATTAHAYRYFMEQTHLNERVNSLLAGIKDYENSLELHLACAEIRRLIVTAEMPADLAAEITAAYQELGQKMNQDNPFVAIRSSATAEDLPDASFAGQQESYLNIRGQADVVNRVQQCYASLFTDRAAYYRHKQNFPHERVALSAAIQMMVFSKASGIMFSVDVSNGDDTKIVIDAIYGLGEYIVLGKVTPNHYVVAKDSMQIVDKSVIKQDVQLVREPDGGVVEVPVPDELQEQQVLTDEQILEIAGYVKAIEEHYGSYMDMEFALDSNTNRVWVVQARPETVWSRRKKEQGKAGTEQHSDFNESYAEALLRGLPASPGVVSGVVHVIDDAKDIEEFQPGEILVTIMTSPDWVPAMKKAVAIITDNGGMTCHAAIISREMQIPCIVGTSSKGTPATKLLQTGDTVTVDASNGIVYQGDVTAMFTQPQPVDQTGTVQAVGETFAPTATPVMMNLGDPDLIERYADLPVDGIGLMREEFIWTSYIHEHPLYLIEEGQQGKAIRMLAAGIAKVARAMSPRPVVLRLSDFKSSEYRQLKGGSKYEPNEPADLLGWRGASRYYDPKYIEAFKLELAAVKKVRQEFGLTNLNVMIPFVRTVAEVEKVTEIMRVEGLERTADFKVYMMAEIPSNIILADQFNQYIDGYSIGSNDLTMLLLGCDRNNDTVASLFDERNLAVKRAIRHLIKTAHAAGKTVSICGQAPSEFPDFTNFLVQSGIDYVSVNPDMVKETKRNVAHFEQRILIDAATGRGLKDQTDYEW
>NZ_CP018888.1|WP_082611600.1|1024992_1025562_+|GNAT-family-N-acetyltransferase
MQMTVYLKRLNQADAAVEYEFFQKMPEINGFEVPYQNISFAEFLTNAIDEREDSSNGLNLPDGHVPDTYFFLWDNDKIVGLFKIRHYLNDFLRQGPGHIGYGILPEFQGRGYGTAGLKLALRKADKILPSNEPEIFLACAKTNLASLQVMKKNGGHVRHENEHEYFVRVLRKAIDEPTSLVGRAAKFEY
>NZ_CP018888.1|WP_056947127.1|1025763_1027575_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGTIGTSQSKNILLKGLERLEYRGYDSAGIFLSEDGSDELVKSVGKIADLEEQIAPEMSGTMGIAHTRWATHGQPSIENAHPQFSTSERFYLVHNGVISNFTQLKEQELAGTTFVSQTDTEVIVQLIAKFVEQDGLTTLAAFQKTLGLLEGSYALMLVDKENEEQLYVAKNKSPMLIGLANGYNIVASDALATFDVTDQYLELHDGDFAVVTKTTVSVFDQDGQDVHRAPITIKIDHAAATKGTYDTFMLKEIDEQPAVLRRISQHYLANNSSINVPAELLQLMAQADRFYFVAAGTSYHASLVGKRLFEKYTKKPVEVGVASEFGYHWPLLSQKPFFIFLSQSGETADSRQVLVEAKKRGLSTLVLTNVVNSTLAREADFHLPLLAGPEIAVASTKAYTAQIAVEAVLAKALGVQLQERLAVEWDLQQQLSLAAVGIDRVLAEKDKFAALTKEYLTDQEHAFYLGRGIDYDVSLEAALKLKEISYVHTEGFAAGELKHGTIALIEDRVPAIFFITEKLTASHTRGNVQEVKARGGNVVVVSTEETKGSGDQFVLPTLTPELMPLLTGVVGQLIAYFSTLQRGLNVDQPRNLAKSVTVE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018888_1	1.27\|1016918\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1016918-1016950	33	NZ_CP024415	Lactobacillus plantarum strain ATCC 8014 plasmid pLP39, complete sequence	7047-7079	3	0.909
NZ_CP018888_1	1.27\|1016918\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1016918-1016950	33	NZ_CP018210	Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_1, complete sequence	25538-25570	3	0.909
NZ_CP018888_1	1.27\|1016918\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1016918-1016950	33	MG788324	Lactobacillus phage PM411, complete genome	42777-42809	3	0.909
NZ_CP018888_1	1.30\|1017101\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017101-1017133	33	MN882551	Butyrivibrio virus Arian, complete genome	13922-13954	6	0.818
NZ_CP018888_1	1.30\|1017101\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017101-1017133	33	MN882552	Butyrivibrio virus Bo-Finn, complete genome	13922-13954	6	0.818
NZ_CP018888_1	1.37\|1017528\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017528-1017560	33	MN693096	Marine virus AFVG_25M80, complete genome	48204-48236	6	0.818
NZ_CP018888_1	1.22\|1016613\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1016613-1016645	33	NZ_CP031070	Bacillus sp. JAS24-2 plasmid pl278, complete sequence	163519-163551	7	0.788
NZ_CP018888_1	1.5\|1015576\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015576-1015608	33	NZ_CP050443	Tolypothrix sp. PCC 7910 plasmid unnamed3, complete sequence	7360-7392	8	0.758
NZ_CP018888_1	1.38\|1017589\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017589-1017621	33	AP014181	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S40-C70, * SEQUENCING IN PROGRESS *	16982-17014	8	0.758
NZ_CP018888_1	1.40\|1017711\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017711-1017743	33	MN693508	Marine virus AFVG_25M1, complete genome	2126-2158	8	0.758
NZ_CP018888_1	1.46\|1018077\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1018077-1018109	33	NC_009926	Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence	41066-41098	8	0.758
NZ_CP018888_1	1.6\|1015637\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015637-1015669	33	MN693774	Marine virus AFVG_250M641, complete genome	5512-5544	9	0.727
NZ_CP018888_1	1.9\|1015820\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015820-1015852	33	NZ_CP023246	Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence	498112-498144	9	0.727
NZ_CP018888_1	1.12\|1016003\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1016003-1016035	33	NZ_LT604075	Lactobacillus salivarius isolate LPM01 plasmid II	189410-189442	9	0.727
NZ_CP018888_1	1.33\|1017284\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017284-1017316	33	MH669274	Escherichia phage PD38, complete genome	71749-71781	9	0.727
NZ_CP018888_1	1.33\|1017284\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017284-1017316	33	KJ135004	Enterobacteria phage Bp4, complete genome	843-875	9	0.727
NZ_CP018888_1	1.38\|1017589\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017589-1017621	33	AJ630128	Bacteriophage S-PM2 complete genome	183618-183650	9	0.727
NZ_CP018888_1	1.38\|1017589\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017589-1017621	33	NC_006820	Synechococcus phage S-PM2, complete genome	183618-183650	9	0.727
NZ_CP018888_1	1.38\|1017589\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017589-1017621	33	LN828717	Synechococcus phage S-PM2 spontaneous deletion mutant, complete genome	174074-174106	9	0.727
NZ_CP018888_1	1.45\|1018016\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1018016-1018048	33	NZ_AP021860	Alteromonas sp. I4 plasmid pAltI4, complete sequence	10402-10434	9	0.727
NZ_CP018888_1	1.1\|1015332\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015332-1015364	33	AP014092	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31A-MedDCM-OCT-S29-C108, * SEQUENCING IN PROGRESS *	14555-14587	10	0.697
NZ_CP018888_1	1.1\|1015332\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015332-1015364	33	AP013625	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S27-C198, * SEQUENCING IN PROGRESS *	8424-8456	10	0.697
NZ_CP018888_1	1.1\|1015332\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015332-1015364	33	AP014088	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31-MedDCM-OCT-S31-C137, * SEQUENCING IN PROGRESS *	2841-2873	10	0.697
NZ_CP018888_1	1.1\|1015332\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015332-1015364	33	AP014089	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31-MedDCM-OCT-S41-C221, * SEQUENCING IN PROGRESS *	6685-6717	10	0.697
NZ_CP018888_1	1.1\|1015332\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015332-1015364	33	AP014091	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31A-MedDCM-OCT-S27-C193, * SEQUENCING IN PROGRESS *	13-45	10	0.697
NZ_CP018888_1	1.1\|1015332\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015332-1015364	33	AP013635	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S45-C323, * SEQUENCING IN PROGRESS *	2155-2187	10	0.697
NZ_CP018888_1	1.1\|1015332\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015332-1015364	33	AP014488	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31A-MedDCM-OCT-S45-C60, * SEQUENCING IN PROGRESS *, 7 ordered pieces	3275-3307	10	0.697
NZ_CP018888_1	1.1\|1015332\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1015332-1015364	33	AP014090	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31A-MedDCM-OCT-S25-C164, * SEQUENCING IN PROGRESS *	1190-1222	10	0.697
NZ_CP018888_1	1.25\|1016796\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1016796-1016828	33	NZ_CP021457	Lactobacillus brevis strain ZLB004 plasmid p1, complete sequence	10279-10311	10	0.697
NZ_CP018888_1	1.29\|1017040\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017040-1017072	33	MK075001	Staphylococcus phage phiSP15-1, complete genome	32254-32286	10	0.697
NZ_CP018888_1	1.37\|1017528\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017528-1017560	33	NC_027331	Citrobacter phage Moon, complete genome	127788-127820	10	0.697
NZ_CP018888_1	1.37\|1017528\|33\|NZ_CP018888\|PILER-CR,CRISPRCasFinder,CRT	1017528-1017560	33	MG250484	Citrobacter phage CF1 ERZ-2017, complete genome	128580-128612	10	0.697

1. spacer 1.27|1016918|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024415 (Lactobacillus plantarum strain ATCC 8014 plasmid pLP39, complete sequence) position: , mismatch: 3, identity: 0.909

cactagtggttcttgtaatggtagcttgaccga	CRISPR spacer
cgctagtagttcttgtaatggtagcttggccga	Protospacer
*.*****.********************.****

2. spacer 1.27|1016918|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018210 (Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_1, complete sequence) position: , mismatch: 3, identity: 0.909

cactagtggttcttgtaatggtagcttgaccga	CRISPR spacer
cgctagtagttcttgtaatggtagcttggccga	Protospacer
*.*****.********************.****

3. spacer 1.27|1016918|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MG788324 (Lactobacillus phage PM411, complete genome) position: , mismatch: 3, identity: 0.909

cactagtggttcttgtaatggtagcttgaccga	CRISPR spacer
cgctagtagttcttgtaatggtagcttggccga	Protospacer
*.*****.********************.****

4. spacer 1.30|1017101|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MN882551 (Butyrivibrio virus Arian, complete genome) position: , mismatch: 6, identity: 0.818

tgatacattgaacccgtctgatttaatgaaaca	CRISPR spacer
tgagtatttgaacccgtctgatttgctgaaaca	Protospacer
***    *****************. *******

5. spacer 1.30|1017101|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MN882552 (Butyrivibrio virus Bo-Finn, complete genome) position: , mismatch: 6, identity: 0.818

tgatacattgaacccgtctgatttaatgaaaca	CRISPR spacer
tgagtatttgaacccgtctgatttgctgaaaca	Protospacer
***    *****************. *******

6. spacer 1.37|1017528|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MN693096 (Marine virus AFVG_25M80, complete genome) position: , mismatch: 6, identity: 0.818

tcaagttaaaagctgatggttcaaaggtggata	CRISPR spacer
tcaagttaaaagctgacggttcaatagaagtta	Protospacer
****************.******* .* .* **

7. spacer 1.22|1016613|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031070 (Bacillus sp. JAS24-2 plasmid pl278, complete sequence) position: , mismatch: 7, identity: 0.788

taatttctgtcaaacaatttatattagttgttg	CRISPR spacer
tatagtctgtcaaacaatttctattatttgtaa	Protospacer
**   *************** ***** **** .

8. spacer 1.5|1015576|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050443 (Tolypothrix sp. PCC 7910 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

cgcggtaggccgtgctaggtatgac----aacggcgc	CRISPR spacer
tgcggttagccgtgctaggtatgacttgaaact----	Protospacer
.***** .*****************    ***

9. spacer 1.38|1017589|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP014181 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C67-MedDCM-OCT-S40-C70, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.758

tccgcgcaatgatttaacaggtgcagaggttaa	CRISPR spacer
agtaggaaatgatttaacaggtgcaaaggttac	Protospacer
  .. * ******************.******

10. spacer 1.40|1017711|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MN693508 (Marine virus AFVG_25M1, complete genome) position: , mismatch: 8, identity: 0.758

tcatgataattcaaaagtttttgaaatgtttac	CRISPR spacer
aaatttaaatccaaaattttttgaaatgtttat	Protospacer
  **   ***.***** ***************.

11. spacer 1.46|1018077|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NC_009926 (Acaryochloris marina MBIC11017 plasmid pREB1, complete sequence) position: , mismatch: 8, identity: 0.758

taagtgttcgataaatttacctagattttcaaa---	CRISPR spacer
gtagtgttcgataaagttacctggatt---agattt	Protospacer
  ************* ******.****   *.*

12. spacer 1.6|1015637|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MN693774 (Marine virus AFVG_250M641, complete genome) position: , mismatch: 9, identity: 0.727

tctcatagtgcccgtttttcttatatattgctt	CRISPR spacer
tggaatagtgcccgtttttcttctaaattctcg	Protospacer
*   ****************** ** *** ..

13. spacer 1.9|1015820|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ttgtattatataaatatagaagagagcaggaga	CRISPR spacer
ttgtattatgtaaatatagatgagttaaatatg	Protospacer
*********.********** ***   *. * .

14. spacer 1.12|1016003|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT604075 (Lactobacillus salivarius isolate LPM01 plasmid II) position: , mismatch: 9, identity: 0.727

tatgttacgccatcatcaatatcatcagggaac	CRISPR spacer
ttagttacgccatcttcaatatcaccaccagaa	Protospacer
*  *********** *********.**  ..*

15. spacer 1.33|1017284|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MH669274 (Escherichia phage PD38, complete genome) position: , mismatch: 9, identity: 0.727

ttgctaatccatggcatatcaataccgacaatt	CRISPR spacer
gattcagtccatggcatctcaatacagacaagt	Protospacer
   ..*.********** ******* ***** *

16. spacer 1.33|1017284|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to KJ135004 (Enterobacteria phage Bp4, complete genome) position: , mismatch: 9, identity: 0.727

ttgctaatccatggcatatcaataccgacaatt	CRISPR spacer
gattcagtccatggcatctcaatacagacaagt	Protospacer
   ..*.********** ******* ***** *

17. spacer 1.38|1017589|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AJ630128 (Bacteriophage S-PM2 complete genome) position: , mismatch: 9, identity: 0.727

tccgcgcaatgatttaacaggtgcagaggttaa	CRISPR spacer
tctatcatatgatttaacagttgcagagattac	Protospacer
**...   ************ *******.***

18. spacer 1.38|1017589|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NC_006820 (Synechococcus phage S-PM2, complete genome) position: , mismatch: 9, identity: 0.727

tccgcgcaatgatttaacaggtgcagaggttaa	CRISPR spacer
tctatcatatgatttaacagttgcagagattac	Protospacer
**...   ************ *******.***

19. spacer 1.38|1017589|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to LN828717 (Synechococcus phage S-PM2 spontaneous deletion mutant, complete genome) position: , mismatch: 9, identity: 0.727

tccgcgcaatgatttaacaggtgcagaggttaa	CRISPR spacer
tctatcatatgatttaacagttgcagagattac	Protospacer
**...   ************ *******.***

20. spacer 1.45|1018016|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP021860 (Alteromonas sp. I4 plasmid pAltI4, complete sequence) position: , mismatch: 9, identity: 0.727

ttacaaccgcttttacggcatttatgcataatc	CRISPR spacer
ctgcaaccggttttacggcaattatgctggcac	Protospacer
.*.****** ********** ******  .  *

21. spacer 1.1|1015332|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP014092 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31A-MedDCM-OCT-S29-C108, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

tattgcaaagaccgctactgaagcgcggccggt	CRISPR spacer
tattgcaaagacagctactaaagctataattct	Protospacer
************ ******.****   . .  *

22. spacer 1.1|1015332|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP013625 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S27-C198, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

tattgcaaagaccgctactgaagcgcggccggt	CRISPR spacer
tattgcaaagacagctactaaagctataattct	Protospacer
************ ******.****   . .  *

23. spacer 1.1|1015332|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP014088 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31-MedDCM-OCT-S31-C137, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

tattgcaaagaccgctactgaagcgcggccggt	CRISPR spacer
tattgcaaagacagctactaaagctataattct	Protospacer
************ ******.****   . .  *

24. spacer 1.1|1015332|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP014089 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31-MedDCM-OCT-S41-C221, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

tattgcaaagaccgctactgaagcgcggccggt	CRISPR spacer
tattgcaaagacagctactaaagctataattct	Protospacer
************ ******.****   . .  *

25. spacer 1.1|1015332|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP014091 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31A-MedDCM-OCT-S27-C193, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

tattgcaaagaccgctactgaagcgcggccggt	CRISPR spacer
tattgcaaagacagctactaaagctataattct	Protospacer
************ ******.****   . .  *

26. spacer 1.1|1015332|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP013635 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28-MedDCM-OCT-S45-C323, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

tattgcaaagaccgctactgaagcgcggccggt	CRISPR spacer
tattgcaaagacagctactaaagctataattct	Protospacer
************ ******.****   . .  *

27. spacer 1.1|1015332|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP014488 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31A-MedDCM-OCT-S45-C60, *** SEQUENCING IN PROGRESS ***, 7 ordered pieces) position: , mismatch: 10, identity: 0.697

tattgcaaagaccgctactgaagcgcggccggt	CRISPR spacer
tattgcaaagacagctactaaagctataattct	Protospacer
************ ******.****   . .  *

28. spacer 1.1|1015332|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to AP014090 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C31A-MedDCM-OCT-S25-C164, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.697

tattgcaaagaccgctactgaagcgcggccggt	CRISPR spacer
tattgcaaagacagctactaaagctataattct	Protospacer
************ ******.****   . .  *

29. spacer 1.25|1016796|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021457 (Lactobacillus brevis strain ZLB004 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

ttgtcttccccccttggcgtaattttgaagttt	CRISPR spacer
tgagaactcctccttggcgtaattttgaaattc	Protospacer
* .   ..**.******************.**.

30. spacer 1.29|1017040|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MK075001 (Staphylococcus phage phiSP15-1, complete genome) position: , mismatch: 10, identity: 0.697

ccatcgcttcctattatacttttaacaccatcg	CRISPR spacer
aacacagttgctattacacttttaacaccatta	Protospacer
    *. ** ******.**************..

31. spacer 1.37|1017528|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to NC_027331 (Citrobacter phage Moon, complete genome) position: , mismatch: 10, identity: 0.697

tcaagttaaaagctgatggttcaaaggtggata	CRISPR spacer
ctcagttaaaagctgatggtgcaagggcatttg	Protospacer
.. ***************** ***.**..  *.

32. spacer 1.37|1017528|33|NZ_CP018888|PILER-CR,CRISPRCasFinder,CRT matches to MG250484 (Citrobacter phage CF1 ERZ-2017, complete genome) position: , mismatch: 10, identity: 0.697

tcaagttaaaagctgatggttcaaaggtggata	CRISPR spacer
ctcagttaaaagctgatggtgcaagggcatttg	Protospacer
.. ***************** ***.**..  *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

725471 : 743779

Streptococcus_phage(42.86%)

integrase,holin,transposase

attL 716402:716416|attR 744653:744667

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
716402:716416	attL	NA	NA	NA	NA
WP_141322579.1\|725471_726380_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.5e-40	36.0
WP_083605803.1\|726402_726855_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_056946946.1\|726874_727024_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_017866965.1\|727410_727551_-	hypothetical protein	NA	NA	NA	NA
WP_003680323.1\|727562_727814_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003680323.1\|727828_728080_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003680323.1\|728094_728346_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003680323.1\|728360_728612_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_056946817.1\|728626_729169_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003596522.1\|729196_729382_-	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_056946814.1\|729393_729954_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_012477193.1\|730171_730543_+	DUF3021 family protein	NA	NA	NA	NA
WP_056946811.1\|730606_731224_+	recombinase family protein	A0A219YA40	Aeromonas_phage	6.5e-16	35.5
WP_075362795.1\|731482_732061_-\|integrase	tyrosine-type recombinase/integrase	U5Q0B8	Bacillus_phage	2.9e-10	29.6
WP_002325565.1\|733548_734229_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	1.3e-126	99.1
WP_056945824.1\|734266_734461_-	hypothetical protein	NA	NA	NA	NA
WP_002328822.1\|734584_734740_-	protein RepA	NA	NA	NA	NA
WP_001038790.1\|735719_736457_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	1.4e-134	99.6
WP_013641314.1\|736581_736665_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA
WP_074412848.1\|737401_738613_-	plasmid recombination protein	NA	NA	NA	NA
WP_075362796.1\|738865_739384_-	replication protein repB	NA	NA	NA	NA
WP_002325565.1\|739408_740089_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	1.3e-126	99.1
WP_054746482.1\|740681_740948_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_054746483.1\|741153_741402_-	hypothetical protein	NA	NA	NA	NA
WP_054746484.1\|741613_742510_+	diacylglycerol kinase	NA	NA	NA	NA
WP_056946950.1\|742603_743779_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	2.0e-26	28.3
744653:744667	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1025763 : 1036095

Enterococcus_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056947127.1\|1025763_1027575_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1HMK6	Paramecium_bursaria_Chlorella_virus	4.6e-94	36.2
WP_054745630.1\|1027629_1028088_-	OsmC family protein	NA	NA	NA	NA
WP_056947124.1\|1028227_1029196_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	1.8e-121	66.3
WP_056947120.1\|1029257_1031423_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.1e-246	59.2
WP_056947118.1\|1031403_1031784_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	Q4Z9B0	Staphylococcus_phage	5.8e-07	31.6
WP_054745628.1\|1031783_1032014_-	glutaredoxin-like protein NrdH	A0A249XVP4	Enterococcus_phage	1.0e-14	55.4
WP_056947115.1\|1032329_1032962_+	hypothetical protein	NA	NA	NA	NA
WP_056947111.1\|1033023_1033233_-	DUF2187 family protein	NA	NA	NA	NA
WP_054745624.1\|1033313_1033871_+	AAA family ATPase	A0A0K2FM14	Brevibacillus_phage	3.7e-10	29.6
WP_056947108.1\|1034016_1035168_+	C40 family peptidase	A0A0A8WIF2	Clostridium_phage	6.8e-19	44.1
WP_141322592.1\|1035363_1036095_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.6e-37	40.2

DBSCAN-SWA_3

1048135 : 1106974

Streptococcus_phage(55.17%)

integrase,protease,transposase

attL 1068625:1068684|attR 1090844:1092172

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056947099.1\|1048135_1049437_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	6.7e-55	56.6
WP_056947096.1\|1049499_1050069_-	hypothetical protein	NA	NA	NA	NA
WP_054745602.1\|1050148_1050622_+	hypothetical protein	NA	NA	NA	NA
WP_056947093.1\|1050605_1051526_+	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	4.5e-29	31.8
WP_056947090.1\|1051613_1053179_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.3e-23	33.5
WP_000237797.1\|1053246_1054440_-\|integrase	site-specific integrase	H0UST3	Bacillus_phage	2.2e-44	35.6
WP_000633907.1\|1054466_1054667_-	DUF3173 domain-containing protein	NA	NA	NA	NA
WP_071875954.1\|1054747_1054951_+	conjugal transfer protein	NA	NA	NA	NA
WP_000845143.1\|1055164_1055395_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	1.0e-27	78.9
WP_000804879.1\|1055391_1055814_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	7.5e-48	68.6
WP_001227350.1\|1056344_1056698_+	helix-turn-helix domain-containing protein	A0A1S5SFA6	Streptococcus_phage	2.2e-53	89.7
WP_032506803.1\|1056755_1056944_-	conjugal transfer protein	D0R0F6	Streptococcus_phage	7.4e-16	61.4
WP_002299749.1\|1057019_1058210_-\|transposase	IS256-like element ISLgar5 family transposase	A0A0N9STL0	Staphylococcus_phage	7.3e-24	28.4
WP_000691737.1\|1058385_1060305_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	97.2
WP_001791010.1\|1060320_1060437_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_000584387.1\|1060681_1061611_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.1e-83	56.6
WP_000768374.1\|1061627_1062650_-	lysozyme family protein	A0A1S5SEZ8	Streptococcus_phage	1.4e-132	75.5
WP_000192390.1\|1062646_1064674_-	hypothetical protein	A0A1S5SF30	Streptococcus_phage	1.8e-195	65.7
WP_000941001.1\|1064670_1067124_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	79.1
WP_000723886.1\|1067107_1067503_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	1.7e-49	75.0
WP_000234705.1\|1067573_1068599_-	hypothetical protein	NA	NA	NA	NA
1068625:1068684	attL	NA	NA	NA	NA
WP_000195404.1\|1068685_1069852_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.2e-106	76.0
WP_000421245.1\|1070014_1070515_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	5.4e-53	61.1
WP_000678782.1\|1070575_1071355_-	abortive infection family protein	NA	NA	NA	NA
WP_001009054.1\|1071396_1071618_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	3.1e-29	93.2
WP_000055367.1\|1071614_1071887_-	hypothetical protein	NA	NA	NA	NA
WP_000426691.1\|1071883_1073068_-	replication initiation factor	A0A1S5SEX3	Streptococcus_phage	1.0e-158	67.6
WP_082611526.1\|1073249_1074653_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	6.7e-178	67.2
WP_000185760.1\|1074674_1075448_-	hypothetical protein	A0A0C4UQZ7	Shigella_phage	1.4e-07	25.5
WP_001234189.1\|1075457_1075835_-	YdcP family protein	A0A1S5SF96	Streptococcus_phage	5.6e-47	77.2
WP_000421280.1\|1075855_1076170_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	7.0e-43	76.7
WP_054746443.1\|1076696_1077155_-	hypothetical protein	NA	NA	NA	NA
WP_056945777.1\|1077231_1077768_-	hypothetical protein	NA	NA	NA	NA
WP_056945776.1\|1078242_1079082_-	hypothetical protein	NA	NA	NA	NA
WP_056945775.1\|1079204_1079498_+	hypothetical protein	NA	NA	NA	NA
WP_056945774.1\|1079591_1079975_+	hypothetical protein	NA	NA	NA	NA
WP_075362811.1\|1079964_1081308_+	hypothetical protein	NA	NA	NA	NA
WP_056945773.1\|1081310_1082528_+	replication initiation factor domain-containing protein	NA	NA	NA	NA
WP_054746436.1\|1082593_1082791_+	DUF3173 domain-containing protein	NA	NA	NA	NA
WP_056945779.1\|1082797_1084096_+\|integrase	site-specific integrase	A0A1B2AQ00	Phage_Wrath	7.2e-25	26.9
WP_054746435.1\|1084327_1084825_+	super-infection exclusion protein B	NA	NA	NA	NA
WP_082611527.1\|1085088_1089576_+	DEAD/DEAH box helicase	A0A2H4UTW8	Bodo_saltans_virus	2.9e-49	27.7
WP_000195404.1\|1089675_1090842_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.2e-106	76.0
WP_056945780.1\|1091130_1091313_+	hypothetical protein	NA	NA	NA	NA
WP_056945781.1\|1091352_1091868_+	hypothetical protein	NA	NA	NA	NA
WP_156408156.1\|1091920_1092067_+	hypothetical protein	NA	NA	NA	NA
WP_056945782.1\|1092305_1093835_-	hypothetical protein	NA	NA	NA	NA
1090844:1092172	attR	NA	NA	NA	NA
WP_054746238.1\|1094113_1094638_-	flavodoxin	NA	NA	NA	NA
WP_056945783.1\|1095013_1096204_+	hypothetical protein	NA	NA	NA	NA
WP_056945784.1\|1096358_1097981_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	5.6e-43	26.6
WP_056945785.1\|1098044_1098572_+	PASTA domain-containing protein	NA	NA	NA	NA
WP_056945786.1\|1098651_1099398_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_056945787.1\|1099480_1099906_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_054746207.1\|1099920_1100544_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_156408157.1\|1100543_1100924_+	CrcB family protein	A0A2H4PQR0	Staphylococcus_phage	3.2e-05	29.9
WP_056945789.1\|1100927_1101296_+	CrcB family protein	NA	NA	NA	NA
WP_056945790.1\|1101442_1102528_+	ABC transporter permease	NA	NA	NA	NA
WP_056945791.1\|1102531_1103230_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-29	38.3
WP_056945792.1\|1103234_1103834_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_054746212.1\|1103928_1104111_+	hypothetical protein	NA	NA	NA	NA
WP_054746213.1\|1104151_1104682_+	hypothetical protein	NA	NA	NA	NA
WP_056945793.1\|1104788_1106177_+	hypothetical protein	NA	NA	NA	NA
WP_056945794.1\|1106293_1106974_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_4

1286104 : 1295072

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056945977.1\|1286104_1288975_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.7e-305	55.3
WP_054745938.1\|1289026_1289563_+	DUF308 domain-containing protein	NA	NA	NA	NA
WP_056945978.1\|1289680_1290562_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	2.2e-09	28.7
WP_054745939.1\|1290561_1291596_+	YvcK family protein	A1IMD5	Streptococcus_phage	3.0e-90	50.2
WP_056945979.1\|1291595_1292543_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.5e-48	36.6
WP_054745940.1\|1292557_1293031_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_054745941.1\|1293111_1293699_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	6.1e-48	50.5
WP_054745942.1\|1293800_1294271_-	transcriptional repressor	NA	NA	NA	NA
WP_054745943.1\|1294430_1295072_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.7e-17	30.8

DBSCAN-SWA_5

1508920 : 1518865

Staphylococcus_phage(37.5%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056946109.1\|1508920_1509811_-	YitT family protein	M1Q1P6	Streptococcus_phage	2.4e-56	41.7
WP_056946110.1\|1509900_1511109_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.6e-42	49.3
WP_054745115.1\|1511135_1511588_+	hypothetical protein	NA	NA	NA	NA
WP_056946423.1\|1511715_1512687_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	8.4e-111	58.2
WP_056946111.1\|1512686_1513217_+	dihydrofolate reductase	A0A076GDN3	Bacillus_phage	2.6e-21	35.4
WP_054745110.1\|1513258_1513924_-	hemolysin III family protein	NA	NA	NA	NA
WP_056946112.1\|1514093_1514939_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	1.5e-15	37.0
WP_054745310.1\|1514953_1515175_+	YozE family protein	NA	NA	NA	NA
WP_056946114.1\|1515210_1516647_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	3.0e-16	25.6
WP_056946115.1\|1516668_1517091_+	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	8.9e-33	52.3
WP_054745104.1\|1517208_1518057_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_082611550.1\|1518049_1518865_+	ribonuclease HII	D2TEQ2	Emiliania_huxleyi_virus	4.2e-23	37.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage