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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP019439 Thioclava nitratireducens strain 25B10_4 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP019438 Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence 0 crisprs csa3 0 0 1 0
NZ_CP019437 Thioclava nitratireducens strain 25B10_4 chromosome, complete genome 0 crisprs c2c9_V-U4,cas3,WYL,csa3,DEDDh 0 0 4 0

Results visualization

1. NZ_CP019439
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 12868 : 62915 49 Shigella_phage(18.18%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP019438
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 55184 : 154565 99 Stx2-converting_phage(16.67%) transposase,integrase attL 45941:45956|attR 88152:88167
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP019437
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1964175 : 1973485 8 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_2 2066855 : 2081868 16 Streptococcus_phage(40.0%) portal,integrase,terminase,head,tail attL 2063444:2063459|attR 2086308:2086323
DBSCAN-SWA_3 2530930 : 2541900 13 Paracoccus_phage(57.14%) head,tail,capsid,protease NA
DBSCAN-SWA_4 2849583 : 2897828 51 Catovirus(20.0%) integrase,holin,protease attL 2847502:2847518|attR 2905369:2905385
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage