CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008925	Salmonella enterica subsp. enterica serovar Cerro strain 87 chromosome, complete genome	3 crisprs	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK	0	38	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008925_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008925_1

1900954-1902507

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

25 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP008925_1

>merge|NZ_CP008925|1|1900954-1902507|CRISPRCasFinder,CRT,PILER-CR
GTGTTTATCCCCGCTGACGCGGGGAACATTTTTCAGCCCTTGCCGACTGCGGAACGCCCCTCGACTTATCCCCGCTGGCGCGGGGAACACATACCGGTTCTGCCATTTCTCGGCTGGATAGCCGGTTTATCCCCGCTGGCGCGGGGAACACAGAACTATCGGGTAAACAGTTACGATAAAGCGCGGTTTATCCCCGCTGGCGCGGGGAACACGGTGTTTAATACCGCCATAAGTTGAGCGCGAACGGTTTATCCCCGCTGGCGCGGGGAACACACTGAATCCCTCAACCATGAGGGATGCCAGTTCGGTTTATCCCCGCTGGCGCGGGGAACACAGATATGCATTTGCTGTATTTATTAAACATTTCGGTTTATCCCCGCTGGCGCGGGGAACACCACACTGTTCGATGATAGCCGCTGAAATGTCGCGGTTTATCCCCGCTGGCGCGGGGAACACAACAGGAAATGGCTCTACAGCGTCAGGGGATGCGGTTTATCCCCGCTGGCGCGGGGAACACGAATAAGCCGGTGTAGGTTTCGGGTGCGTGATCGGTTTATCCCCGCTGGCGCGGGGAACACGATGTGGTAACAAAGAGATTGGTTTTCCAATCCGGTTTATCCCCGCTGGCGCGGGGAACACATATTCAAAAACAATATCGAATAAAAAATAAACGGTTTATCCCCGCTGGCGCGGGGAACACCGTGTTGATCATCTCCCAATGTTCCAGCATCACGGTTTATCCCCGCTGGCGCGGGGAACACAGTGAGTTAATTTATTGTCGCGGCGGCTGTGGCGGTTTATCCCCGCTGGCGCGGGGAACACGTAATGTCCCCATCTATATTCTGCGCATTCACCGGTTTATCCCCGCTGGCGCGGGGAACACCTTAGGGAAATCTCCCGTTATCGTCTTCTGTGCGGTTTATCCCCGCTGGCGCGGGGAACACTAACCGCGGGTATCGATATGCAGATCGACCGACGGTTTATCCCCGCTGGCGCGGGGAACACCTCACCAAACGAAACAACCCCTCCCCAAAGCTCGGTTTATCCCCGCTGGCGCGGGGAACACGAATGAGAACCCATTTAGAGGTCGAATCACGGCGGTTTATCCCCGCTGGCGCGGGGAACACTACCTCACCCTGATCCGTGTCGGACGAGGCTGCGGTTTATCCCCGCTGGCGCGGGGAACACACCTGAGTTAAAGCCGCCAGGCGGCGGCGCGTCGGTTTATCCCCGCTGGCGCGGGGAACACATTTCGTAAATAACTTTTCCGGCCTGAGTGCGCGGTTTATCCCCGCTGGCGCGGGGAACACGCGTGTTTTTTTGCTCTGTACCGTTGCGGAGCCGGTTTATCCCCGCTGGCGCGGGGAACACCCGGGTTGATCAACTGCTGAAAATTTACGCGGCGGTTTATCCCCGCTGGCGCGGGGAACACGGTTCAGGATGGCAGAAGAGTTCGCAGGGAAGCGGTTTATCCCCGCTGGCGCGGGGAACACTAATTCTGAAGGGGGGCGAGGCAGTTCCGGTGCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP008925|1|1|1900954-1902507|CRISPRCasFinder
GTGTTTATCCCCGCTGACGCGGGGAACAT	TTTTCAGCCCTTGCCGACTGCGGAACGCCCCT
CGACTTATCCCCGCTGGCGCGGGGAACAC	ATACCGGTTCTGCCATTTCTCGGCTGGATAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAACTATCGGGTAAACAGTTACGATAAAGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTGTTTAATACCGCCATAAGTTGAGCGCGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGAATCCCTCAACCATGAGGGATGCCAGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGATATGCATTTGCTGTATTTATTAAACATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACACTGTTCGATGATAGCCGCTGAAATGTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACAGGAAATGGCTCTACAGCGTCAGGGGATG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATAAGCCGGTGTAGGTTTCGGGTGCGTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATGTGGTAACAAAGAGATTGGTTTTCCAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTCAAAAACAATATCGAATAAAAAATAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTGTTGATCATCTCCCAATGTTCCAGCATCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTGAGTTAATTTATTGTCGCGGCGGCTGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTAATGTCCCCATCTATATTCTGCGCATTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTTAGGGAAATCTCCCGTTATCGTCTTCTGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAACCGCGGGTATCGATATGCAGATCGACCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCACCAAACGAAACAACCCCTCCCCAAAGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATGAGAACCCATTTAGAGGTCGAATCACGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACCTCACCCTGATCCGTGTCGGACGAGGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCTGAGTTAAAGCCGCCAGGCGGCGGCGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTCGTAAATAACTTTTCCGGCCTGAGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTGTTTTTTTGCTCTGTACCGTTGCGGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGGTTGATCAACTGCTGAAAATTTACGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTCAGGATGGCAGAAGAGTTCGCAGGGAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATTCTGAAGGGGGGCGAGGCAGTTCCGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP008925|1|1|1900954-1902507|CRT
GTGTTTATCCCCGCTGACGCGGGGAACAT	TTTTCAGCCCTTGCCGACTGCGGAACGCCCCT
CGACTTATCCCCGCTGGCGCGGGGAACAC	ATACCGGTTCTGCCATTTCTCGGCTGGATAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGAACTATCGGGTAAACAGTTACGATAAAGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTGTTTAATACCGCCATAAGTTGAGCGCGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACTGAATCCCTCAACCATGAGGGATGCCAGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGATATGCATTTGCTGTATTTATTAAACATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CACACTGTTCGATGATAGCCGCTGAAATGTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACAGGAAATGGCTCTACAGCGTCAGGGGATG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATAAGCCGGTGTAGGTTTCGGGTGCGTGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATGTGGTAACAAAGAGATTGGTTTTCCAATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTCAAAAACAATATCGAATAAAAAATAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTGTTGATCATCTCCCAATGTTCCAGCATCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTGAGTTAATTTATTGTCGCGGCGGCTGTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTAATGTCCCCATCTATATTCTGCGCATTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTTAGGGAAATCTCCCGTTATCGTCTTCTGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAACCGCGGGTATCGATATGCAGATCGACCGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTCACCAAACGAAACAACCCCTCCCCAAAGCT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAATGAGAACCCATTTAGAGGTCGAATCACGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACCTCACCCTGATCCGTGTCGGACGAGGCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCTGAGTTAAAGCCGCCAGGCGGCGGCGCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTCGTAAATAACTTTTCCGGCCTGAGTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTGTTTTTTTGCTCTGTACCGTTGCGGAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGGGTTGATCAACTGCTGAAAATTTACGCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGTTCAGGATGGCAGAAGAGTTCGCAGGGAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAATTCTGAAGGGGGGCGAGGCAGTTCCGGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP008925|1|1|1901019-1902507|PILER-CR
TTATCCCCGCTGGCGCGGGGAACACATAC	CGGTTCTGCCATTTCTCGGCTGGATAGCCGGT
TTATCCCCGCTGGCGCGGGGAACACAGAA	CTATCGGGTAAACAGTTACGATAAAGCGCGGT
TTATCCCCGCTGGCGCGGGGAACACGGTG	TTTAATACCGCCATAAGTTGAGCGCGAACGGT
TTATCCCCGCTGGCGCGGGGAACACACTG	AATCCCTCAACCATGAGGGATGCCAGTTCGGT
TTATCCCCGCTGGCGCGGGGAACACAGAT	ATGCATTTGCTGTATTTATTAAACATTTCGGT
TTATCCCCGCTGGCGCGGGGAACACCACA	CTGTTCGATGATAGCCGCTGAAATGTCGCGGT
TTATCCCCGCTGGCGCGGGGAACACAACA	GGAAATGGCTCTACAGCGTCAGGGGATGCGGT
TTATCCCCGCTGGCGCGGGGAACACGAAT	AAGCCGGTGTAGGTTTCGGGTGCGTGATCGGT
TTATCCCCGCTGGCGCGGGGAACACGATG	TGGTAACAAAGAGATTGGTTTTCCAATCCGGT
TTATCCCCGCTGGCGCGGGGAACACATAT	TCAAAAACAATATCGAATAAAAAATAAACGGT
TTATCCCCGCTGGCGCGGGGAACACCGTG	TTGATCATCTCCCAATGTTCCAGCATCACGGT
TTATCCCCGCTGGCGCGGGGAACACAGTG	AGTTAATTTATTGTCGCGGCGGCTGTGGCGGT
TTATCCCCGCTGGCGCGGGGAACACGTAA	TGTCCCCATCTATATTCTGCGCATTCACCGGT
TTATCCCCGCTGGCGCGGGGAACACCTTA	GGGAAATCTCCCGTTATCGTCTTCTGTGCGGT
TTATCCCCGCTGGCGCGGGGAACACTAAC	CGCGGGTATCGATATGCAGATCGACCGACGGT
TTATCCCCGCTGGCGCGGGGAACACCTCA	CCAAACGAAACAACCCCTCCCCAAAGCTCGGT
TTATCCCCGCTGGCGCGGGGAACACGAAT	GAGAACCCATTTAGAGGTCGAATCACGGCGGT
TTATCCCCGCTGGCGCGGGGAACACTACC	TCACCCTGATCCGTGTCGGACGAGGCTGCGGT
TTATCCCCGCTGGCGCGGGGAACACACCT	GAGTTAAAGCCGCCAGGCGGCGGCGCGTCGGT
TTATCCCCGCTGGCGCGGGGAACACATTT	CGTAAATAACTTTTCCGGCCTGAGTGCGCGGT
TTATCCCCGCTGGCGCGGGGAACACGCGT	GTTTTTTTGCTCTGTACCGTTGCGGAGCCGGT
TTATCCCCGCTGGCGCGGGGAACACCCGG	GTTGATCAACTGCTGAAAATTTACGCGGCGGT
TTATCCCCGCTGGCGCGGGGAACACGGTT	CAGGATGGCAGAAGAGTTCGCAGGGAAGCGGT
TTATCCCCGCTGGCGCGGGGAACACTAAT	TCTGAAGGGGGGCGAGGCAGTTCCGGTGCGGT
TTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008925.1\|WP_023227127.1\|1906943_1908479_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP008925.1\|WP_023233925.1\|1906324_1906927_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP008925.1\|WP_023201015.1\|1913082_1913817_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP008925.1\|WP_001173663.1\|1896692_1897298_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP008925.1\|WP_023227126.1\|1905243_1906302_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP008925.1\|WP_000134246.1\|1893562_1894612_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP008925.1\|WP_000372384.1\|1898733_1899642_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP008925.1\|WP_020839118.1\|1895087_1895798_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP008925.1\|WP_001221538.1\|1892820_1893582_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP008925.1\|WP_000517480.1\|1895816_1896128_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP008925.1\|WP_001537530.1\|1896318_1896642_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP008925.1\|WP_023893472.1\|1908836_1911536_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP008925.1\|WP_000281412.1\|1903804_1904509_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
NZ_CP008925.1\|WP_023233927.1\|1897284_1898724_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP008925.1\|WP_000666425.1\|1904508_1905234_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP008925.1\|WP_001219244.1\|1894608_1895088_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP008925.1\|WP_000490481.1\|1899892_1900939_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP008925.1\|WP_000062282.1\|1902591_1902885_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP008925.1\|WP_000118674.1\|1902887_1903805_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP008925.1\|WP_023233923.1\|1911916_1912870_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277

Protein	Function_ID	Function_description	E-value
NZ_CP008925.1\|WP_023227127.1\|1906943_1908479_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP008925.1\|WP_023233925.1\|1906324_1906927_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.35849e-36
NZ_CP008925.1\|WP_023201015.1\|1913082_1913817_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.08407e-139
NZ_CP008925.1\|WP_001173663.1\|1896692_1897298_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP008925.1\|WP_023227126.1\|1905243_1906302_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.13373e-121
NZ_CP008925.1\|WP_000134246.1\|1893562_1894612_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP008925.1\|WP_000372384.1\|1898733_1899642_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP008925.1\|WP_020839118.1\|1895087_1895798_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.27466e-119
NZ_CP008925.1\|WP_001221538.1\|1892820_1893582_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP008925.1\|WP_000517480.1\|1895816_1896128_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP008925.1\|WP_001537530.1\|1896318_1896642_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_CP008925.1\|WP_023893472.1\|1908836_1911536_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.84861e-141
NZ_CP008925.1\|WP_000281412.1\|1903804_1904509_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	4.22526e-90
NZ_CP008925.1\|WP_023233927.1\|1897284_1898724_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP008925.1\|WP_000666425.1\|1904508_1905234_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	3.27863e-48
NZ_CP008925.1\|WP_001219244.1\|1894608_1895088_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP008925.1\|WP_000490481.1\|1899892_1900939_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP008925.1\|WP_000062282.1\|1902591_1902885_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	5.81067e-65
NZ_CP008925.1\|WP_000118674.1\|1902887_1903805_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.03247e-157
NZ_CP008925.1\|WP_023233923.1\|1911916_1912870_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0

>NZ_CP008925.1|WP_000490481.1|1899892_1900939_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP008925.1|WP_000372384.1|1898733_1899642_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP008925.1|WP_023233927.1|1897284_1898724_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVDMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP008925.1|WP_001173663.1|1896692_1897298_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP008925.1|WP_001537530.1|1896318_1896642_-|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP008925.1|WP_000517480.1|1895816_1896128_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP008925.1|WP_020839118.1|1895087_1895798_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP008925.1|WP_001219244.1|1894608_1895088_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP008925.1|WP_000134246.1|1893562_1894612_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP008925.1|WP_001221538.1|1892820_1893582_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP008925.1|WP_000062282.1|1902591_1902885_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ
>NZ_CP008925.1|WP_000118674.1|1902887_1903805_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSQPIAIPLPVALGDSGHRST
>NZ_CP008925.1|WP_000281412.1|1903804_1904509_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
>NZ_CP008925.1|WP_000666425.1|1904508_1905234_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLASDEVGTLISQREYRCDGYWHVAISATPDAPYSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>NZ_CP008925.1|WP_023227126.1|1905243_1906302_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAALDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSELIAKQFGKLKSDKDAKPEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>NZ_CP008925.1|WP_023233925.1|1906324_1906927_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAVLCRILHPDAQKALLDWFATLSERYERKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSYVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNRIRWANEYLSTSRGK
>NZ_CP008925.1|WP_023227127.1|1906943_1908479_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVSHEEQFLAALNIVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRTLQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>NZ_CP008925.1|WP_023893472.1|1908836_1911536_+|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTKNIICNYHLLAYHCLDVAACGKYIIKNNIFNSCNILKECNISGTNAENWIIWFLASHDIGKFARGFQKYAEFPDSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRNRFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMPLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRIVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYTDHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQVVLVSDAGEASYYSKHFGLVG
>NZ_CP008925.1|WP_023233923.1|1911916_1912870_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRIAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP008925.1|WP_023201015.1|1913082_1913817_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNDLPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP008925_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008925_2

1919213-1920522

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

21 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP008925_2

>merge|NZ_CP008925|2|1919213-1920522|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCCCGCTGGCGCGGGGAACACTAACTCATCACATCCGCGTCAGACCTCGTGACCGGTTTATCCCCGCTGGCGCGGGGAACACTGCGACCCGGCCGGACCGGGCACCATTACCACCGGTTTATCCCCGCTGGCGCGGGGAACACAGTTGCTAAATACTCAGGTAAACAACCCAACGCGGTTTATCCCCGCTGGCGCGGGGAACACGCCCATCATCCCCTGCGGCGCGCATTTTTCCGAGGTTTATCCCCGCTGGCGCGGGGAACACCATTGAGTCGTGAGCGCATTGAGTTGATTACTCGGTTTATCCCCGCTGGCGCGGGGAACACTTTGTGCTGATAAAATTTAATTTCCGGGTTGTCGGTTTATCCCCGCTGGCGCGGGGAACACAGCCCCGCCGCCACCGCCTGTATTTAACAAGGCGGTTTATCCCCGCTGGCGCGGGGAACACGCCGCATGCTGGATGAAATGGTTCGTTATGGTCGGTTTATCCCCGCTGGCGCGGGGAACACATGATCCAGATGTAAAAGAAAAGGCATTCAGACGGTTTATCCCCGCTGGCGCGGGGAACACTCATTATCAAAGACCCAGCCGAACTCGCCGCCCGGTTTATCCCCGCTGGCGCGGGGAACACAATGGGCGCGACACGGCCCCGAGGGAAGCAAACGGTTTATCCCCGCTGGCGCGGGGAACACTTTCACAAATCATACCTGCCATACCCAGCATCCGGTTTATCCCCGCTGGCGCGGGGAACACGTTTGCGGACAAAAGTAACTATAACTCTATGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCCGAGGGCGGCGATCTGCGAAACGGGGTTGCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGTTGTCATTCCAGCTTACCAGGCCGTTTTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGATTTGTCGATGTTGCTCATTGGGCTGACTCCGGTTTATCCCCGCTGGCGCGGGGAACACATGAAAAAGATGACCATTGGTGAACGCATACGCGGTTTATCCCCGCTGGCGCGGGGAACACTTCACTTGGCAAATTTTAAGCCGCATTTCATACGGTTTATCCCCGCTGGCGCGGGGAACACATCGATCATTGTACTGTAAACAGATGACTGACCGGTTTATCCCCGCTGGCGCGGGGAACACACCGCCTGGCGAATCAATATCCAGCAAGATCCCGGTTTATCCCCGCTGGCGCGGGGAACACATACGACATAACATCAATATCTGAGCCGGTCACGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP008925|2|2|1919213-1920522|CRISPRCasFinder
ACGGCTATCCCCGCTGGCGCGGGGAACAC	TAACTCATCACATCCGCGTCAGACCTCGTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGACCCGGCCGGACCGGGCACCATTACCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTGCTAAATACTCAGGTAAACAACCCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCCATCATCCCCTGCGGCGCGCATTTTTCCG
AGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTGAGTCGTGAGCGCATTGAGTTGATTACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTGCTGATAAAATTTAATTTCCGGGTTGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCCCGCCGCCACCGCCTGTATTTAACAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGCATGCTGGATGAAATGGTTCGTTATGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGATCCAGATGTAAAAGAAAAGGCATTCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCATTATCAAAGACCCAGCCGAACTCGCCGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGGGCGCGACACGGCCCCGAGGGAAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTCACAAATCATACCTGCCATACCCAGCATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTGCGGACAAAAGTAACTATAACTCTATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGAGGGCGGCGATCTGCGAAACGGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTTGTCATTCCAGCTTACCAGGCCGTTTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATTTGTCGATGTTGCTCATTGGGCTGACTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGAAAAAGATGACCATTGGTGAACGCATACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCACTTGGCAAATTTTAAGCCGCATTTCATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGATCATTGTACTGTAAACAGATGACTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGCCTGGCGAATCAATATCCAGCAAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATACGACATAACATCAATATCTGAGCCGGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP008925|2|2|1919213-1920522|CRT
ACGGCTATCCCCGCTGGCGCGGGGAACAC	TAACTCATCACATCCGCGTCAGACCTCGTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGACCCGGCCGGACCGGGCACCATTACCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTGCTAAATACTCAGGTAAACAACCCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCCATCATCCCCTGCGGCGCGCATTTTTCCG
AGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTGAGTCGTGAGCGCATTGAGTTGATTACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTGCTGATAAAATTTAATTTCCGGGTTGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCCCGCCGCCACCGCCTGTATTTAACAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGCATGCTGGATGAAATGGTTCGTTATGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGATCCAGATGTAAAAGAAAAGGCATTCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCATTATCAAAGACCCAGCCGAACTCGCCGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGGGCGCGACACGGCCCCGAGGGAAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTCACAAATCATACCTGCCATACCCAGCATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTGCGGACAAAAGTAACTATAACTCTATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGAGGGCGGCGATCTGCGAAACGGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTTGTCATTCCAGCTTACCAGGCCGTTTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATTTGTCGATGTTGCTCATTGGGCTGACTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGAAAAAGATGACCATTGGTGAACGCATACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCACTTGGCAAATTTTAAGCCGCATTTCATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGATCATTGTACTGTAAACAGATGACTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGCCTGGCGAATCAATATCCAGCAAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATACGACATAACATCAATATCTGAGCCGGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP008925|2|2|1919274-1920522|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGACCCGGCCGGACCGGGCACCATTACCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTGCTAAATACTCAGGTAAACAACCCAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCCATCATCCCCTGCGGCGCGCATTTTTCCG
AGGTTTATCCCCGCTGGCGCGGGGAACAC	CATTGAGTCGTGAGCGCATTGAGTTGATTACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGTGCTGATAAAATTTAATTTCCGGGTTGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCCCCGCCGCCACCGCCTGTATTTAACAAGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCCGCATGCTGGATGAAATGGTTCGTTATGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGATCCAGATGTAAAAGAAAAGGCATTCAGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCATTATCAAAGACCCAGCCGAACTCGCCGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATGGGCGCGACACGGCCCCGAGGGAAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTCACAAATCATACCTGCCATACCCAGCATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTTGCGGACAAAAGTAACTATAACTCTATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCCGAGGGCGGCGATCTGCGAAACGGGGTTGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGTTGTCATTCCAGCTTACCAGGCCGTTTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGATTTGTCGATGTTGCTCATTGGGCTGACTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATGAAAAAGATGACCATTGGTGAACGCATACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCACTTGGCAAATTTTAAGCCGCATTTCATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGATCATTGTACTGTAAACAGATGACTGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACCGCCTGGCGAATCAATATCCAGCAAGATCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATACGACATAACATCAATATCTGAGCCGGTCA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008925.1\|WP_023227127.1\|1906943_1908479_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP008925.1\|WP_000210861.1\|1923006_1924644_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP008925.1\|WP_023201015.1\|1913082_1913817_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP008925.1\|WP_023233922.1\|1913918_1915631_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP008925.1\|WP_000832397.1\|1930974_1931445_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP008925.1\|WP_000036734.1\|1921625_1922924_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP008925.1\|WP_023227126.1\|1905243_1906302_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP008925.1\|WP_023233915.1\|1931441_1931978_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP008925.1\|WP_023233921.1\|1915630_1917430_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP008925.1\|WP_000108313.1\|1917865_1918228_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP008925.1\|WP_077910620.1\|1926948_1929648_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP008925.1\|WP_023233925.1\|1906324_1906927_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP008925.1\|WP_023233917.1\|1929660_1930434_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP008925.1\|WP_023233916.1\|1930453_1930960_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP008925.1\|WP_023233919.1\|1924871_1925672_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP008925.1\|WP_023893472.1\|1908836_1911536_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP008925.1\|WP_000842511.1\|1926280_1926868_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP008925.1\|WP_001199961.1\|1920818_1921490_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP008925.1\|WP_023233920.1\|1918317_1919115_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP008925.1\|WP_023233923.1\|1911916_1912870_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277

Protein	Function_ID	Function_description	E-value
NZ_CP008925.1\|WP_023227127.1\|1906943_1908479_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP008925.1\|WP_000210861.1\|1923006_1924644_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP008925.1\|WP_023201015.1\|1913082_1913817_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.08407e-139
NZ_CP008925.1\|WP_023233922.1\|1913918_1915631_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP008925.1\|WP_000832397.1\|1930974_1931445_+\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	4.46838e-99
NZ_CP008925.1\|WP_000036734.1\|1921625_1922924_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP008925.1\|WP_023227126.1\|1905243_1906302_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.13373e-121
NZ_CP008925.1\|WP_023233915.1\|1931441_1931978_+\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	2.33622e-120
NZ_CP008925.1\|WP_023233921.1\|1915630_1917430_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP008925.1\|WP_000108313.1\|1917865_1918228_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP008925.1\|WP_077910620.1\|1926948_1929648_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP008925.1\|WP_023233925.1\|1906324_1906927_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.35849e-36
NZ_CP008925.1\|WP_023233917.1\|1929660_1930434_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP008925.1\|WP_023233916.1\|1930453_1930960_+\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.04257e-104
NZ_CP008925.1\|WP_023233919.1\|1924871_1925672_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.92241e-158
NZ_CP008925.1\|WP_023893472.1\|1908836_1911536_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.84861e-141
NZ_CP008925.1\|WP_000842511.1\|1926280_1926868_+\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	6.76622e-100
NZ_CP008925.1\|WP_001199961.1\|1920818_1921490_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP008925.1\|WP_023233920.1\|1918317_1919115_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.49245e-101
NZ_CP008925.1\|WP_023233923.1\|1911916_1912870_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0

>NZ_CP008925.1|WP_023233920.1|1918317_1919115_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGSDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP008925.1|WP_000108313.1|1917865_1918228_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP008925.1|WP_023233921.1|1915630_1917430_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKLPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAVEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP008925.1|WP_023233922.1|1913918_1915631_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGFLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP008925.1|WP_023201015.1|1913082_1913817_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNDLPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP008925.1|WP_023233923.1|1911916_1912870_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRIAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP008925.1|WP_023893472.1|1908836_1911536_+|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTKNIICNYHLLAYHCLDVAACGKYIIKNNIFNSCNILKECNISGTNAENWIIWFLASHDIGKFARGFQKYAEFPDSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRNRFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMPLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRIVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYTDHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQVVLVSDAGEASYYSKHFGLVG
>NZ_CP008925.1|WP_023227127.1|1906943_1908479_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVSHEEQFLAALNIVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRTLQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>NZ_CP008925.1|WP_023233925.1|1906324_1906927_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAVLCRILHPDAQKALLDWFATLSERYERKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSYVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNRIRWANEYLSTSRGK
>NZ_CP008925.1|WP_023227126.1|1905243_1906302_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAALDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSELIAKQFGKLKSDKDAKPEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>NZ_CP008925.1|WP_001199961.1|1920818_1921490_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP008925.1|WP_000036734.1|1921625_1922924_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP008925.1|WP_000210861.1|1923006_1924644_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP008925.1|WP_023233919.1|1924871_1925672_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLEPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP008925.1|WP_000842511.1|1926280_1926868_+|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDSILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP008925.1|WP_077910620.1|1926948_1929648_+|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIAYGVGMLLSASPYSVSGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVSWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESSYQAVALGSGKDLGVVGAVAVDITHSIAHMPQNDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP008925.1|WP_023233917.1|1929660_1930434_+|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKGNETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP008925.1|WP_023233916.1|1930453_1930960_+|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVEGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP008925.1|WP_000832397.1|1930974_1931445_+|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGTEPAEGDFEAFATLQVDYQ
>NZ_CP008925.1|WP_023233915.1|1931441_1931978_+|fimbrial-protein
MNRIFQTVGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALESSSIANGFAIGIETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGENIMPGEFNASAMVNFEYQ

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Crispr_ID: NZ_CP008925_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008925_3

4182043-4182132

Orphan

Consensus_repeat	Method
TTGTCCAACGGATGTCCAACGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008925_3

>merge|NZ_CP008925|3|4182043-4182132|CRISPRCasFinder
TTGTCCAACGGATGTCCAACGGATGTCCAACGCAAACACCAGTAATGACGCGGCTCACAGCAAATGTTGTCCAACGGATGTCCAACGATT

>NZ_CP008925|3|3|4182043-4182132|CRISPRCasFinder
TTGTCCAACGGATGTCCAACGGAT	GTCCAACGCAAACACCAGTAATGACGCGGCTCACAGCAAATG
TTGTCCAACGGATGTCCAACGATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008925.1\|WP_000786966.1\|4178795_4179005_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP008925.1\|WP_000736917.1\|4184049_4184490_+\|recombination-protein-NinB	unknown	unknown	gnl\|CDD\|368607
NZ_CP008925.1\|WP_000131496.1\|4182536_4183973_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP008925.1\|WP_001083253.1\|4177551_4178052_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379158
NZ_CP008925.1\|WP_000611490.1\|4184486_4185359_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	unknown	unknown	gnl\|CDD\|238846
NZ_CP008925.1\|WP_000188967.1\|4186846_4187050_+\|phage-NinH-family-protein	unknown	unknown	gnl\|CDD\|283883
NZ_CP008925.1\|WP_001200013.1\|4176754_4176907_-\|protease-FtsH-inhibitory-lysogeny-factor-CIII	unknown	unknown	gnl\|CDD\|280268
NZ_CP008925.1\|WP_000984218.1\|4185355_4185529_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340181
NZ_CP008925.1\|WP_000738703.1\|4188407_4188734_+\|phage-holin,-lambda-family	unknown	unknown	gnl\|CDD\|273709
NZ_CP008925.1\|WP_000924603.1\|4185674_4186076_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008925.1\|WP_000712403.1\|4180066_4180756_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP008925.1\|WP_000841071.1\|4179346_4179865_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008925.1\|WP_000713611.1\|4177230_4177518_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008925.1\|WP_001047565.1\|4187207_4187981_+\|antitermination-protein	unknown	unknown	gnl\|CDD\|367572
NZ_CP008925.1\|WP_001103493.1\|4181192_4181474_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP008925.1\|WP_000113772.1\|4185495_4185672_+\|NinE-family-protein	unknown	unknown	gnl\|CDD\|283078
NZ_CP008925.1\|WP_001108075.1\|4186238_4186850_+\|recombination-protein-NinG	unknown	unknown	gnl\|CDD\|368603
NZ_CP008925.1\|WP_000182204.1\|4180866_4181082_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP008925.1\|WP_001125981.1\|4181508_4181655_+\|DUF2740-family-protein	unknown	unknown	gnl\|CDD\|287804
NZ_CP008925.1\|WP_000216186.1\|4178133_4178436_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP008925.1\|WP_000786966.1\|4178795_4179005_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	1.69786e-28
NZ_CP008925.1\|WP_000736917.1\|4184049_4184490_+\|recombination-protein-NinB	gnl\|CDD\|368607	pfam05772, NinB, NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	2.49909e-58
NZ_CP008925.1\|WP_000131496.1\|4182536_4183973_+\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	0
NZ_CP008925.1\|WP_001083253.1\|4177551_4178052_-\|HNH-endonuclease	gnl\|CDD\|379158	pfam13392, HNH_3, HNH endonuclease. This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.	7.67113e-08
NZ_CP008925.1\|WP_000188967.1\|4186846_4187050_+\|phage-NinH-family-protein	gnl\|CDD\|283883	pfam06322, Phage_NinH, Phage NinH protein. This family consists of several phage NinH proteins. The function of this family is unknown.	1.01371e-32
NZ_CP008925.1\|WP_001200013.1\|4176754_4176907_-\|protease-FtsH-inhibitory-lysogeny-factor-CIII	gnl\|CDD\|280268	pfam02061, Lambda_CIII, Lambda Phage CIII. The CIII protein from bacteriophage lambda is an inhibitor of the FtsH peptidase.	1.90693e-20
NZ_CP008925.1\|WP_000984218.1\|4185355_4185529_+\|hypothetical-protein	gnl\|CDD\|340181	pfam17466, NinD, Family of unknown function. This is a family of unknown function found in Enterobacteria phage P22 and Enterobacteria phage lambda.	2.12039e-29
NZ_CP008925.1\|WP_000738703.1\|4188407_4188734_+\|phage-holin,-lambda-family	gnl\|CDD\|273709	TIGR01594, Uncharacterized_protein_HI_1416, phage holin, lambda family. This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions].	3.67945e-38
NZ_CP008925.1\|WP_001103493.1\|4181192_4181474_+\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	3.24682e-25
NZ_CP008925.1\|WP_000712403.1\|4180066_4180756_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	4.14427e-29
NZ_CP008925.1\|WP_001047565.1\|4187207_4187981_+\|antitermination-protein	gnl\|CDD\|367572	pfam03589, Antiterm, Antitermination protein.	3.43217e-25
NZ_CP008925.1\|WP_000611490.1\|4184486_4185359_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	gnl\|CDD\|238846	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly modified version of the P loop, the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues. Although PAPS reductase has no ATPase activity, it shows a striking similarity to the structure of the ATP pyrophosphatase (ATP PPase) domain of GMP synthetase, indicating that both enzyme families have evolved from a common ancestral nucleotide-binding fold. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP) . It is also found in NodP nodulation protein P from Rhizobium meliloti which has ATP sulphurylase activity (sulphate adenylate transferase) .	1.52318e-27
NZ_CP008925.1\|WP_000113772.1\|4185495_4185672_+\|NinE-family-protein	gnl\|CDD\|283078	pfam05322, NinE, NINE Protein. This family consists of NINE proteins from several bacteriophages and from E. coli.	6.0732e-25
NZ_CP008925.1\|WP_001108075.1\|4186238_4186850_+\|recombination-protein-NinG	gnl\|CDD\|368603	pfam05766, NinG, Bacteriophage Lambda NinG protein. NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.	1.00672e-88
NZ_CP008925.1\|WP_000182204.1\|4180866_4181082_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	4.10103e-21
NZ_CP008925.1\|WP_001125981.1\|4181508_4181655_+\|DUF2740-family-protein	gnl\|CDD\|287804	pfam10872, DUF2740, Protein of unknown function (DUF2740). This family of proteins with unknown function has a highly conserved sequence.	5.85578e-19

>NZ_CP008925.1|WP_001125981.1|4181508_4181655_+|DUF2740-family-protein
MPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE
>NZ_CP008925.1|WP_001103493.1|4181192_4181474_+|hypothetical-protein
MNVVATKSKKVARIESTLLNKLAMMGQKTFAKAMGVPEYQVSRWKNGFFSQVSMMLAVLEYGIEDEEMAELTRRLATYLTKEKAPKNGEFFEA
>NZ_CP008925.1|WP_000182204.1|4180866_4181082_+|helix-turn-helix-domain-containing-protein
MTNKAIQKAVAIAGSQQKLASLCGVKQPTVWRWLHGGGIDAKYVAAIVKATGGRIKARELRPDLADLLAAS
>NZ_CP008925.1|WP_000712403.1|4180066_4180756_-|helix-turn-helix-transcriptional-regulator
MKKETLSDRLNKAMELAGMSQGALAKASGVAQPTIWRLTSGNARGSTKIVEIANALGVNSEWLSTGIGPMKKDGTTPINASPSSNTFKIDILDLEVSAGPGVINREFVEILRSVEYSQDDARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDVSIKNFDGDGIYAFLYDDTAHVKRLQKMKDKLLVISDNKSYSAWDPIERDEMNRVFVFGKVIGSMPQTYRKHG
>NZ_CP008925.1|WP_000841071.1|4179346_4179865_-|hypothetical-protein
MAESNVSVQAFKGFLEELMSLNIMKEATARNLKNSSARLLTVVKEEEMDDVTKLDVNELAERYINATEPKPSDSSITAYKSRMESAIKKFVAYQAGETIPYIPVERQEEEEELVELKQPVEVKSATPSSYSLPVVIRPELGVTVTISGIPTDLTSEEAERISSILKVYVRPH
>NZ_CP008925.1|WP_000786966.1|4178795_4179005_+|fumarate-hydratase-FumD
MKNEELAQLRYQEMCRIVGDVVFAMVAEGHETKRVAIADVIRTELAKGLDKWDIDQIQVMELAVKLLEE
>NZ_CP008925.1|WP_000216186.1|4178133_4178436_-|hypothetical-protein
MTVIVYGKSTFAGNAKTRRHERRRKLAMERDTICNIIDSIFGCDAPDASHEVKAKRIDRVTKAISLAGTRHKEVEGGSVLLPDVALYAAGHRKCGQITAR
>NZ_CP008925.1|WP_001083253.1|4177551_4178052_-|HNH-endonuclease
MNSADLSKILEYEPSTGVFRWNKSKGTALAGDVAGSVNHHGYREITIDGKKLQANRLAWLFVTGMFPNGVIDHINRVRDDNRFSNLRDISVAENNLNKSIRLDNKSGTSGVNWDIKREKWRATGQINRKQKHLGYFKNIDDAIEARRIFCRKYHLTSKEYAYEVTE
>NZ_CP008925.1|WP_000713611.1|4177230_4177518_-|hypothetical-protein
MKKFKGTPGPWSGKDVRICRQDRAGLQLGFIMTHDENRVAECEANAHLIAAAPDLLEALQLAEKAMAEGRNVTYPEWYGVINKARAAISKALGEE
>NZ_CP008925.1|WP_001200013.1|4176754_4176907_-|protease-FtsH-inhibitory-lysogeny-factor-CIII
MQYRFAGWPIAGCPSESLLDRITRKLRAGWKRLGEILNQPGVPRHDHYAC
>NZ_CP008925.1|WP_000131496.1|4182536_4183973_+|AAA-family-ATPase
MTDNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHREQKPVDGLTLFDELERKSLTVSVGGFAYIADIAKNTPSAANVVAYAMRVRETAMERYAINRMTEATELLYSRNGMTATQKYEAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKRFDPSGEQRGMSTGISSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKKPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDSDFNRAIETANRLSEIDLLYIDDTPGLSLAQIVSESRRIKRENGCVGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGNTGTVYCIQENGAIYDTDQQSAEMRRREREEPQSKKKGGF
>NZ_CP008925.1|WP_000736917.1|4184049_4184490_+|recombination-protein-NinB
MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLGDVSRQVEWHGRWLDVESWKCVFTAALKQQDVVPNLAGDGFVVIGQSTSRMRVSEFAELLELIQAFGAERGVKWSDEARLALEWKARWGDRAA
>NZ_CP008925.1|WP_000611490.1|4184486_4185359_+|phosphoadenosine-phosphosulfate-reductase-family-protein
MINVVSFSGGRTSAYLLWLMEQKRRAGEDVHYVFMDTGCEHPMTYRFVREVVKFWDIPLTVLQVDINPELGQPNGYTVWEPKDIQTRMPVLKPFIDMVKKYGTPYVGGAFCTDRLKLVPFTKYCDDHFGRWNYTTWIGIRADEPKRLKPKPGIRYLAELSDFEKEDILAWWKQQPFDLQIPEHLGNCIFCIKKSTQKIGLACKDEEGLQRVFNEVITGSHVRDGHRETPKEIMYRGRMSLDGIAKMYSENDYQALYQDMVRAKRFDTGSCSESCEIFGGQLDFDFGREAA
>NZ_CP008925.1|WP_000984218.1|4185355_4185529_+|hypothetical-protein
MMRCYRCGECKEDNRFRPNQPYWNRWCLRCERTPTGVLPLPQEKEDVWRDSDEVSPT
>NZ_CP008925.1|WP_000113772.1|4185495_4185672_+|NinE-family-protein
MARQRRSITDIICENCKYLPTKRSRNKRKPIPKESDVKTFNYTAHLWDIRWLRHRARK
>NZ_CP008925.1|WP_000924603.1|4185674_4186076_+|hypothetical-protein
MLLIQPGFGLSIKKGHMFGQKDSQRKMLSIRLPFISIYWLNKEATNYWYECARAAFNDPDWFIENHHAVRQAKRKSTITKMKAYRDAWEEHRNRYQKDIEKLESENTELKRRLGEAKRDIDAYKRLVGGDSHA
>NZ_CP008925.1|WP_001108075.1|4186238_4186850_+|recombination-protein-NinG
MAKPARRRCKNEECREWFHPAFANQWWCSPECGTKIALERRSKEREKAEKAAEKKRRREEQQHKDRLKIRKLALKPRSYWIKQAQQAVNAYIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELINRIGQAAVDEIESNHNRHRWTVEECKAIKAEYQQKLKDLCESRSEAA
>NZ_CP008925.1|WP_000188967.1|4186846_4187050_+|phage-NinH-family-protein
MTPSIKTIPELLIETYGNQTEVARRLSCHRNTVRRYLYDKEARYHAIVNGVLMIHQGGRGVYDRNQH
>NZ_CP008925.1|WP_001047565.1|4187207_4187981_+|antitermination-protein
MNLENTVKFHSPKSPQLSDSPRATASDSLTNTDVMAAFGMAQSRAPLGFSAFSGKMNLSDNDKRKAIQLLVQHGMKHCDKVAALRKLDTNVKGKVVQTLATFAYQDYCRSAASNVMCSCCKGRGVLRKKKRIVKHPGCGEKTPAKTAVEVTESLCTKCNGAGVVSTSCVKCRGRGVALDRKKSELQGAPVYSSCKQCSGRGYERIPAASCFRAICQFTAAISPGVWDKAIKPFYESLISKVEMEESAANVVLSKVTS
>NZ_CP008925.1|WP_000738703.1|4188407_4188734_+|phage-holin,-lambda-family
MKKMPEKHDLLTAMMAAKEQGIGAILAFAMAYLRGRYNGGAFKKTLIDATMCAIIAWFIRDLLVFAGLSSNLAYIASVFIGYIGTDSIGSLIKRFAAKKAGVDDANQQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	MW013502	Salmonella virus L cI-40 13-am43, complete genome	31672-31713	0	1.0
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	NC_004348	Enterobacteria phage ST64T, complete genome	14874-14915	0	1.0
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	MW013503	Salmonella virus L cII-101, complete genome	31673-31714	0	1.0
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	14874-14915	0	1.0
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	MF188997	Salmonella phage vB_SalP_PM43, complete genome	14769-14810	0	1.0
NZ_CP008925_1	1.5\|1901227\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901227-1901258	32	MH370364	Salmonella phage S107, complete genome	31892-31923	1	0.969
NZ_CP008925_1	1.5\|1901227\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901227-1901258	32	MH370382	Salmonella phage S135, complete genome	31892-31923	1	0.969
NZ_CP008925_1	1.5\|1901227\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901227-1901258	32	MH370383	Salmonella phage S137, complete genome	31892-31923	1	0.969
NZ_CP008925_1	1.29\|1901231\|32\|NZ_CP008925\|PILER-CR	1901231-1901262	32	MH370364	Salmonella phage S107, complete genome	31892-31923	1	0.969
NZ_CP008925_1	1.29\|1901231\|32\|NZ_CP008925\|PILER-CR	1901231-1901262	32	MH370382	Salmonella phage S135, complete genome	31892-31923	1	0.969
NZ_CP008925_1	1.29\|1901231\|32\|NZ_CP008925\|PILER-CR	1901231-1901262	32	MH370383	Salmonella phage S137, complete genome	31892-31923	1	0.969
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	KC911857	Salmonella phage SPC32N, complete genome	38263-38294	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	MK972697	Salmonella phage SF10, complete genome	8043-8074	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	KC139516	Salmonella phage FSL SP-016, partial genome	45062-45093	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	KC911856	Salmonella phage SPC32H, complete genome	38263-38294	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	MK972696	Salmonella phage Si3 KFo-2019, complete genome	7908-7939	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	NC_016761	Salmonella phage SPN1S, complete genome	38287-38318	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	KT630649	Salmonella phage SEN34, complete genome	32213-32244	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	JQ691610	Salmonella phage SPN9TCW, complete genome	38292-38323	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	MK972695	Salmonella phage SI5, complete genome	12574-12605	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	MK972688	Salmonella phage SI8, complete genome	27535-27566	2	0.938
NZ_CP008925_1	1.3\|1901105\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901105-1901136	32	MK972689	Salmonella phage SF6, complete genome	14215-14246	2	0.938
NZ_CP008925_1	1.5\|1901227\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901227-1901258	32	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	62100-62131	2	0.938
NZ_CP008925_1	1.5\|1901227\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901227-1901258	32	MT774487	Salmonella phage MG40, complete genome	22903-22934	2	0.938
NZ_CP008925_1	1.5\|1901227\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901227-1901258	32	JQ806764	Salmonella phage vB_SosS_Oslo, complete genome	29884-29915	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	KC911857	Salmonella phage SPC32N, complete genome	38263-38294	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	MK972697	Salmonella phage SF10, complete genome	8043-8074	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	KC139516	Salmonella phage FSL SP-016, partial genome	45062-45093	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	KC911856	Salmonella phage SPC32H, complete genome	38263-38294	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	MK972696	Salmonella phage Si3 KFo-2019, complete genome	7908-7939	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	NC_016761	Salmonella phage SPN1S, complete genome	38287-38318	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	KT630649	Salmonella phage SEN34, complete genome	32213-32244	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	JQ691610	Salmonella phage SPN9TCW, complete genome	38292-38323	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	MK972695	Salmonella phage SI5, complete genome	12574-12605	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	MK972688	Salmonella phage SI8, complete genome	27535-27566	2	0.938
NZ_CP008925_1	1.27\|1901109\|32\|NZ_CP008925\|PILER-CR	1901109-1901140	32	MK972689	Salmonella phage SF6, complete genome	14215-14246	2	0.938
NZ_CP008925_1	1.29\|1901231\|32\|NZ_CP008925\|PILER-CR	1901231-1901262	32	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	62100-62131	2	0.938
NZ_CP008925_1	1.29\|1901231\|32\|NZ_CP008925\|PILER-CR	1901231-1901262	32	MT774487	Salmonella phage MG40, complete genome	22903-22934	2	0.938
NZ_CP008925_1	1.29\|1901231\|32\|NZ_CP008925\|PILER-CR	1901231-1901262	32	JQ806764	Salmonella phage vB_SosS_Oslo, complete genome	29884-29915	2	0.938
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	NC_011802	Salmonella enterica bacteriophage SE1, complete genome	15034-15075	2	0.952
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	CP051278	Salmonella phage ST-87, complete genome	25843-25884	2	0.952
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	CP051288	Salmonella phage ST-29, complete genome	38685-38726	2	0.952
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	CP051285	Salmonella phage ST-32, complete genome	31779-31820	2	0.952
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	NC_014900	Salmonella phage ST160, complete genome	15102-15143	2	0.952
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	CP051272	Salmonella phage SW-70, complete genome	35832-35873	2	0.952
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_006949	Enterobacteria phage ES18, complete genome	30394-30425	3	0.906
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AY736146	Salmonella typhimurium bacteriophage ES18, complete sequence	30394-30425	3	0.906
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MT774487	Salmonella phage MG40, complete genome	22957-22988	3	0.906
NZ_CP008925_2	2.10\|1919791\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919791-1919822	32	NZ_CP035200	Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence	15470-15501	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	CP053324	Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence	35872-35903	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	25479-25510	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	25479-25510	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	25416-25447	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KC911857	Salmonella phage SPC32N, complete genome	37812-37843	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	JQ182733	Enterobacterial phage mEp213, complete genome	26431-26462	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KR296686	Salmonella phage 22, complete genome	22170-22201	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	L06296	Bacteriophage P22 eaA - eaI genes, complete cds	4168-4199	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_002371	Enterobacteria phage P22 virus, complete genome	25479-25510	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KR296688	Salmonella phage 34, complete genome	32359-32390	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KC911856	Salmonella phage SPC32H, complete genome	37812-37843	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AF217253	Bacteriophage P22 complete genome	7230-7261	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_016761	Salmonella phage SPN1S, complete genome	37836-37867	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MH370364	Salmonella phage S107, complete genome	32302-32333	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KR296687	Salmonella phage 25, complete genome	32366-32397	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	25416-25447	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MH370382	Salmonella phage S135, complete genome	32302-32333	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	JQ691610	Salmonella phage SPN9TCW, complete genome	37841-37872	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MH370383	Salmonella phage S137, complete genome	32302-32333	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_019706	Enterobacteria phage mEp043 c-1, complete genome	26431-26462	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AF527608	Bacteriophage P22-pbi, complete sequence	25479-25510	4	0.875
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	EU570103	Salmonella phage epsilon34, complete genome	25178-25209	4	0.875
NZ_CP008925_2	2.10\|1919791\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919791-1919822	32	NZ_CP040809	Escherichia fergusonii strain EFCF056 plasmid pEF04, complete sequence	37389-37420	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	BK000583	TPA_inf: Enterobacteria phage P22 wild type, complete genome	25835-25866	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AB426868	Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1	25772-25803	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KR296686	Salmonella phage 22, complete genome	21814-21845	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	L06296	Bacteriophage P22 eaA - eaI genes, complete cds	4524-4555	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_002371	Enterobacteria phage P22 virus, complete genome	25835-25866	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KR296688	Salmonella phage 34, complete genome	32003-32034	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AF217253	Bacteriophage P22 complete genome	7586-7617	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MH370364	Salmonella phage S107, complete genome	31946-31977	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KR296687	Salmonella phage 25, complete genome	32010-32041	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AB362338	Enterobacteria phage P22 DNA, complete sequence, strain: MSU	25772-25803	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MH370382	Salmonella phage S135, complete genome	31946-31977	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MH370383	Salmonella phage S137, complete genome	31946-31977	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AF527608	Bacteriophage P22-pbi, complete sequence	25835-25866	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	EU570103	Salmonella phage epsilon34, complete genome	25534-25565	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	45477-45508	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	36919-36950	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	116178-116209	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_004313	Salmonella phage ST64B, complete genome	24475-24506	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MW013502	Salmonella virus L cI-40 13-am43, complete genome	24979-25010	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MG969415	UNVERIFIED: Salmonella phage GE_vB_TR, complete genome	18928-18959	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	JQ182729	Enterobacterial phage mEp390, complete genome	24991-25022	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_004348	Enterobacteria phage ST64T, complete genome	8166-8197	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MW013503	Salmonella virus L cII-101, complete genome	24979-25010	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	JQ182730	Enterobacteria phage mEp237, complete genome	36018-36049	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_018275	Salmonella phage vB_SemP_Emek, complete genome	25145-25176	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	8166-8197	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MF188997	Salmonella phage vB_SalP_PM43, complete genome	8165-8196	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_031077	Enterobacter phage Tyrion, complete genome	39907-39938	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	AY055382	Salmonella typhimurium phage ST64B complete sequence	24475-24506	5	0.844
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_047875	Salmonella phage UPF_BP1, complete genome	36139-36170	5	0.844
NZ_CP008925_1	1.11\|1901593\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901593-1901624	32	MN693712	Marine virus AFVG_250M462, complete genome	5681-5712	6	0.812
NZ_CP008925_1	1.24\|1902386\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902386-1902417	32	NZ_CP012699	Microbacterium sp. No. 7 plasmid B, complete sequence	32437-32468	6	0.812
NZ_CP008925_1	1.35\|1901597\|32\|NZ_CP008925\|PILER-CR	1901597-1901628	32	MN693712	Marine virus AFVG_250M462, complete genome	5681-5712	6	0.812
NZ_CP008925_1	1.48\|1902390\|32\|NZ_CP008925\|PILER-CR	1902390-1902421	32	NZ_CP012699	Microbacterium sp. No. 7 plasmid B, complete sequence	32437-32468	6	0.812
NZ_CP008925_2	2.6\|1919547\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919547-1919578	32	CP053405	Salmonella enterica strain 2010K-2057 plasmid unnamed2, complete sequence	2380-2411	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	MN161573	UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome	25835-25866	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	45664-45695	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	12205-12236	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	JQ288021	Salmonella phage SPN3UB, complete genome	37684-37715	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_010393	Phage Gifsy-2, complete genome	10137-10168	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_010392	Phage Gifsy-1, complete genome	38182-38213	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_013059	Salmonella phage c341, complete genome	23418-23449	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	FJ000341	Salmonella phage g341c, complete genome	23418-23449	6	0.812
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	JQ806764	Salmonella phage vB_SosS_Oslo, complete genome	29938-29969	6	0.812
NZ_CP008925_2	2.20\|1920401\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920401-1920432	32	NZ_CP011413	Sedimenticola thiotaurini strain SIP-G1 plasmid, complete sequence	21113-21144	6	0.812
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	NC_016160	Escherichia phage HK75, complete genome	28592-28633	6	0.857
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	NC_019705	Enterobacteria phage mEpX2, complete genome	29046-29087	6	0.857
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	KY979108	Escherichia phage ECP1, complete genome	427-468	6	0.857
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	NC_019719	Enterobacteria phage HK633, complete genome	31740-31781	6	0.857
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	JF974339	Enterobacteria phage IME10, complete genome	9723-9764	6	0.857
NZ_CP008925_3	3.1\|4182067\|42\|NZ_CP008925\|CRISPRCasFinder	4182067-4182108	42	NC_005344	Enterobacteria phage Sf6, complete genome	28410-28451	6	0.857
NZ_CP008925_1	1.6\|1901288\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901288-1901319	32	MN045230	Klebsiella phage Magnus, complete genome	53159-53190	7	0.781
NZ_CP008925_1	1.22\|1902264\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902264-1902295	32	NC_015851	Acidithiobacillus caldus SM-1 megaplasmid, complete sequence	75085-75116	7	0.781
NZ_CP008925_1	1.24\|1902386\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902386-1902417	32	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	336660-336691	7	0.781
NZ_CP008925_1	1.24\|1902386\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902386-1902417	32	NZ_CP023069	Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence	345447-345478	7	0.781
NZ_CP008925_1	1.24\|1902386\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902386-1902417	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	474631-474662	7	0.781
NZ_CP008925_1	1.24\|1902386\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902386-1902417	32	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	344351-344382	7	0.781
NZ_CP008925_1	1.24\|1902386\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902386-1902417	32	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	74586-74617	7	0.781
NZ_CP008925_1	1.24\|1902386\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902386-1902417	32	NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	353164-353195	7	0.781
NZ_CP008925_1	1.30\|1901292\|32\|NZ_CP008925\|PILER-CR	1901292-1901323	32	MN045230	Klebsiella phage Magnus, complete genome	53159-53190	7	0.781
NZ_CP008925_1	1.46\|1902268\|32\|NZ_CP008925\|PILER-CR	1902268-1902299	32	NC_015851	Acidithiobacillus caldus SM-1 megaplasmid, complete sequence	75085-75116	7	0.781
NZ_CP008925_1	1.48\|1902390\|32\|NZ_CP008925\|PILER-CR	1902390-1902421	32	NZ_CP029453	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence	336660-336691	7	0.781
NZ_CP008925_1	1.48\|1902390\|32\|NZ_CP008925\|PILER-CR	1902390-1902421	32	NZ_CP023069	Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence	345447-345478	7	0.781
NZ_CP008925_1	1.48\|1902390\|32\|NZ_CP008925\|PILER-CR	1902390-1902421	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	474631-474662	7	0.781
NZ_CP008925_1	1.48\|1902390\|32\|NZ_CP008925\|PILER-CR	1902390-1902421	32	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	344351-344382	7	0.781
NZ_CP008925_1	1.48\|1902390\|32\|NZ_CP008925\|PILER-CR	1902390-1902421	32	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	74586-74617	7	0.781
NZ_CP008925_1	1.48\|1902390\|32\|NZ_CP008925\|PILER-CR	1902390-1902421	32	NZ_CP029233	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence	353164-353195	7	0.781
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	218580-218611	7	0.781
NZ_CP008925_2	2.10\|1919791\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919791-1919822	32	NZ_CP045514	Salmonella enterica subsp. enterica serovar Anatum strain Sal-3948 plasmid p77k, complete sequence	52930-52961	7	0.781
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_004775	Enterobacteria phage epsilon15, complete genome	37188-37219	7	0.781
NZ_CP008925_2	2.18\|1920279\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920279-1920310	32	NC_014534	Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence	192537-192568	7	0.781
NZ_CP008925_1	1.9\|1901471\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901471-1901502	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	739930-739961	8	0.75
NZ_CP008925_1	1.11\|1901593\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901593-1901624	32	NZ_CP043618	Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence	2884-2915	8	0.75
NZ_CP008925_1	1.11\|1901593\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901593-1901624	32	NZ_CP043618	Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence	33680-33711	8	0.75
NZ_CP008925_1	1.16\|1901898\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901898-1901929	32	MT457553	Shewanella phage Thanatos-2, complete genome	101453-101484	8	0.75
NZ_CP008925_1	1.16\|1901898\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901898-1901929	32	MT457552	Shewanella phage Thanatos-1, complete genome	101239-101270	8	0.75
NZ_CP008925_1	1.25\|1902447\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902447-1902478	32	NZ_CP051681	Cohnella sp. MFER-1 plasmid unnamed1	170097-170128	8	0.75
NZ_CP008925_1	1.33\|1901475\|32\|NZ_CP008925\|PILER-CR	1901475-1901506	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	739930-739961	8	0.75
NZ_CP008925_1	1.35\|1901597\|32\|NZ_CP008925\|PILER-CR	1901597-1901628	32	NZ_CP043618	Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence	2884-2915	8	0.75
NZ_CP008925_1	1.35\|1901597\|32\|NZ_CP008925\|PILER-CR	1901597-1901628	32	NZ_CP043618	Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence	33680-33711	8	0.75
NZ_CP008925_1	1.40\|1901902\|32\|NZ_CP008925\|PILER-CR	1901902-1901933	32	MT457553	Shewanella phage Thanatos-2, complete genome	101453-101484	8	0.75
NZ_CP008925_1	1.40\|1901902\|32\|NZ_CP008925\|PILER-CR	1901902-1901933	32	MT457552	Shewanella phage Thanatos-1, complete genome	101239-101270	8	0.75
NZ_CP008925_1	1.49\|1902451\|32\|NZ_CP008925\|PILER-CR	1902451-1902482	32	NZ_CP051681	Cohnella sp. MFER-1 plasmid unnamed1	170097-170128	8	0.75
NZ_CP008925_2	2.1\|1919242\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1919242-1919273	32	JX434031	Pseudomonas phage JBD24, complete genome	2242-2273	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1360697-1360728	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1192633-1192664	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1479214-1479245	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1101414-1101445	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1254375-1254406	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1788112-1788143	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	201276-201307	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	68798-68829	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	739302-739333	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	834490-834521	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	904068-904099	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	945210-945241	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	904068-904099	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	945210-945241	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	904068-904099	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	904072-904103	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	945210-945241	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	945210-945241	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	945210-945241	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1239950-1239981	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	904068-904099	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	945212-945243	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1153739-1153770	8	0.75
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1153739-1153770	8	0.75
NZ_CP008925_2	2.4\|1919425\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919425-1919456	32	NZ_LR594663	Variovorax sp. RA8 plasmid 2	138418-138449	8	0.75
NZ_CP008925_2	2.6\|1919547\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919547-1919578	32	NC_048053	Dickeya phage vB_DsoM_JA29, complete genome	7262-7293	8	0.75
NZ_CP008925_2	2.6\|1919547\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919547-1919578	32	MH389777	Dickeya phage vB_DsoM_JA11, complete genome	7230-7261	8	0.75
NZ_CP008925_2	2.6\|1919547\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919547-1919578	32	MH460462	Dickeya phage vB_DsoM_JA33, complete genome	7220-7251	8	0.75
NZ_CP008925_2	2.6\|1919547\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919547-1919578	32	MH460460	Dickeya phage vB_DsoM_JA13, complete genome	7377-7408	8	0.75
NZ_CP008925_2	2.10\|1919791\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919791-1919822	32	NZ_CP007767	Campylobacter peloridis LMG 23910 plasmid pPEL1, complete sequence	40956-40987	8	0.75
NZ_CP008925_2	2.10\|1919791\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919791-1919822	32	NC_012040	Campylobacter lari RM2100 plasmid pCL2100, complete sequence	13740-13771	8	0.75
NZ_CP008925_2	2.10\|1919791\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919791-1919822	32	NZ_CP044261	Campylobacter armoricus strain CA639 plasmid pCA639-1, complete sequence	42319-42350	8	0.75
NZ_CP008925_2	2.14\|1920035\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920035-1920066	32	NZ_HG813238	Erwinia amylovora strain 692 plasmid pEA68, complete sequence	43006-43037	8	0.75
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KC911857	Salmonella phage SPC32N, complete genome	38168-38199	8	0.75
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	KC911856	Salmonella phage SPC32H, complete genome	38168-38199	8	0.75
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_016761	Salmonella phage SPN1S, complete genome	38192-38223	8	0.75
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	JQ691610	Salmonella phage SPN9TCW, complete genome	38197-38228	8	0.75
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_016158	Escherichia phage HK639, complete genome	41028-41059	8	0.75
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	62046-62077	8	0.75
NZ_CP008925_1	1.11\|1901593\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901593-1901624	32	NC_015704	Runella slithyformis DSM 19594 plasmid pRUNSL02, complete sequence	21172-21203	9	0.719
NZ_CP008925_1	1.11\|1901593\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901593-1901624	32	MH572349	Microviridae sp. isolate SD_SC_70, complete genome	2872-2903	9	0.719
NZ_CP008925_1	1.12\|1901654\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901654-1901685	32	MH598805	Pelagibacter phage HTVC109P, complete genome	10400-10431	9	0.719
NZ_CP008925_1	1.15\|1901837\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901837-1901868	32	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	81694-81725	9	0.719
NZ_CP008925_1	1.15\|1901837\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901837-1901868	32	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	104642-104673	9	0.719
NZ_CP008925_1	1.16\|1901898\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901898-1901929	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1814217-1814248	9	0.719
NZ_CP008925_1	1.35\|1901597\|32\|NZ_CP008925\|PILER-CR	1901597-1901628	32	NC_015704	Runella slithyformis DSM 19594 plasmid pRUNSL02, complete sequence	21172-21203	9	0.719
NZ_CP008925_1	1.35\|1901597\|32\|NZ_CP008925\|PILER-CR	1901597-1901628	32	MH572349	Microviridae sp. isolate SD_SC_70, complete genome	2872-2903	9	0.719
NZ_CP008925_1	1.36\|1901658\|32\|NZ_CP008925\|PILER-CR	1901658-1901689	32	MH598805	Pelagibacter phage HTVC109P, complete genome	10400-10431	9	0.719
NZ_CP008925_1	1.39\|1901841\|32\|NZ_CP008925\|PILER-CR	1901841-1901872	32	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	81694-81725	9	0.719
NZ_CP008925_1	1.39\|1901841\|32\|NZ_CP008925\|PILER-CR	1901841-1901872	32	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	104642-104673	9	0.719
NZ_CP008925_1	1.40\|1901902\|32\|NZ_CP008925\|PILER-CR	1901902-1901933	32	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1814217-1814248	9	0.719
NZ_CP008925_2	2.6\|1919547\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919547-1919578	32	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	50637-50668	9	0.719
NZ_CP008925_2	2.9\|1919730\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919730-1919761	32	NZ_CP029540	Aquitalea sp. USM4 plasmid unnamed, complete sequence	43646-43677	9	0.719
NZ_CP008925_2	2.9\|1919730\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919730-1919761	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2619366-2619397	9	0.719
NZ_CP008925_2	2.9\|1919730\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919730-1919761	32	CP047483	Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence	16394-16425	9	0.719
NZ_CP008925_2	2.9\|1919730\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919730-1919761	32	NZ_CP044170	Campylobacter jejuni strain AR-0413 plasmid pAR-0413-1, complete sequence	58434-58465	9	0.719
NZ_CP008925_2	2.9\|1919730\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919730-1919761	32	JN700520	Staphylococcus phage StB12, complete genome	6612-6643	9	0.719
NZ_CP008925_2	2.14\|1920035\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920035-1920066	32	NZ_CP028352	Pantoea vagans strain PV989 plasmid pPV989-94, complete sequence	63877-63908	9	0.719
NZ_CP008925_2	2.14\|1920035\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920035-1920066	32	NZ_CP035035	Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence	108053-108084	9	0.719
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NC_010333	Caulobacter sp. K31 plasmid pCAUL02, complete sequence	41837-41868	9	0.719
NZ_CP008925_2	2.16\|1920157\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920157-1920188	32	NZ_CP039495	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence	16657-16688	9	0.719
NZ_CP008925_1	1.11\|1901593\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901593-1901624	32	NZ_CP015356	Bacillus thuringiensis strain MYBT18246 plasmid p101287, complete sequence	100524-100555	10	0.688
NZ_CP008925_1	1.11\|1901593\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901593-1901624	32	NC_047948	Staphylococcus phage phiSA_BS2, complete genome	143901-143932	10	0.688
NZ_CP008925_1	1.11\|1901593\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901593-1901624	32	MH078572	Staphylococcus phage phiSA_BS1, complete genome	98187-98218	10	0.688
NZ_CP008925_1	1.19\|1902081\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902081-1902112	32	NZ_CP028488	Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence	100853-100884	10	0.688
NZ_CP008925_1	1.35\|1901597\|32\|NZ_CP008925\|PILER-CR	1901597-1901628	32	NZ_CP015356	Bacillus thuringiensis strain MYBT18246 plasmid p101287, complete sequence	100524-100555	10	0.688
NZ_CP008925_1	1.35\|1901597\|32\|NZ_CP008925\|PILER-CR	1901597-1901628	32	NC_047948	Staphylococcus phage phiSA_BS2, complete genome	143901-143932	10	0.688
NZ_CP008925_1	1.35\|1901597\|32\|NZ_CP008925\|PILER-CR	1901597-1901628	32	MH078572	Staphylococcus phage phiSA_BS1, complete genome	98187-98218	10	0.688
NZ_CP008925_1	1.43\|1902085\|32\|NZ_CP008925\|PILER-CR	1902085-1902116	32	NZ_CP028488	Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence	100853-100884	10	0.688
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	236279-236310	10	0.688
NZ_CP008925_2	2.2\|1919303\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919303-1919334	32	NZ_CP045421	Maribius sp. THAF1 plasmid pTHAF1_a, complete sequence	4186-4217	10	0.688
NZ_CP008925_2	2.14\|1920035\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920035-1920066	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	651807-651838	10	0.688
NZ_CP008925_2	2.14\|1920035\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1920035-1920066	32	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	652244-652275	10	0.688
NZ_CP008925_1	1.1\|1900983\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1900983-1901014	32	CP054927	Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence	47822-47853	11	0.656
NZ_CP008925_1	1.12\|1901654\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1901654-1901685	32	KJ019071	Synechococcus phage ACG-2014g isolate Syn7803US105, complete genome	112213-112244	11	0.656
NZ_CP008925_1	1.36\|1901658\|32\|NZ_CP008925\|PILER-CR	1901658-1901689	32	KJ019071	Synechococcus phage ACG-2014g isolate Syn7803US105, complete genome	112213-112244	11	0.656
NZ_CP008925_2	2.6\|1919547\|32\|NZ_CP008925\|CRISPRCasFinder,CRT,PILER-CR	1919547-1919578	32	AP014501	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, * SEQUENCING IN PROGRESS *, 3 ordered pieces	8916-8947	11	0.656
NZ_CP008925_1	1.20\|1902142\|32\|NZ_CP008925\|CRISPRCasFinder,CRT	1902142-1902173	32	NZ_LR594664	Variovorax sp. RA8 plasmid 3	225855-225886	19	0.406
NZ_CP008925_1	1.44\|1902146\|32\|NZ_CP008925\|PILER-CR	1902146-1902177	32	NZ_LR594664	Variovorax sp. RA8 plasmid 3	225855-225886	19	0.406

1. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

2. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

3. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

4. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

5. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 0, identity: 1.0

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
******************************************

6. spacer 1.5|1901227|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 1, identity: 0.969

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgagggatgccagtt	Protospacer
******** ***********************

7. spacer 1.5|1901227|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 1, identity: 0.969

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgagggatgccagtt	Protospacer
******** ***********************

8. spacer 1.5|1901227|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 1, identity: 0.969

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgagggatgccagtt	Protospacer
******** ***********************

9. spacer 1.29|1901231|32|NZ_CP008925|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 1, identity: 0.969

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgagggatgccagtt	Protospacer
******** ***********************

10. spacer 1.29|1901231|32|NZ_CP008925|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 1, identity: 0.969

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgagggatgccagtt	Protospacer
******** ***********************

11. spacer 1.29|1901231|32|NZ_CP008925|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 1, identity: 0.969

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgagggatgccagtt	Protospacer
******** ***********************

12. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

13. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MK972697 (Salmonella phage SF10, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

14. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

15. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

16. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MK972696 (Salmonella phage Si3 KFo-2019, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

17. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

18. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

19. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

20. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MK972695 (Salmonella phage SI5, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

21. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MK972688 (Salmonella phage SI8, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

22. spacer 1.3|1901105|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MK972689 (Salmonella phage SF6, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

23. spacer 1.5|1901227|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 2, identity: 0.938

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgaaggatgccagtt	Protospacer
******** ***********.***********

24. spacer 1.5|1901227|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 2, identity: 0.938

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgaaggatgccagtt	Protospacer
******** ***********.***********

25. spacer 1.5|1901227|32|NZ_CP008925|CRISPRCasFinder,CRT matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 2, identity: 0.938

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgaaggatgccagtt	Protospacer
******** ***********.***********

26. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

27. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to MK972697 (Salmonella phage SF10, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

28. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

29. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

30. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to MK972696 (Salmonella phage Si3 KFo-2019, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

31. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

32. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

33. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

34. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to MK972695 (Salmonella phage SI5, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

35. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to MK972688 (Salmonella phage SI8, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

36. spacer 1.27|1901109|32|NZ_CP008925|PILER-CR matches to MK972689 (Salmonella phage SF6, complete genome) position: , mismatch: 2, identity: 0.938

agaactatcgggtaaacagttacgataaagcg	CRISPR spacer
agaactatcgggtaaacagatacgataaaacg	Protospacer
******************* *********.**

37. spacer 1.29|1901231|32|NZ_CP008925|PILER-CR matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 2, identity: 0.938

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgaaggatgccagtt	Protospacer
******** ***********.***********

38. spacer 1.29|1901231|32|NZ_CP008925|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 2, identity: 0.938

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgaaggatgccagtt	Protospacer
******** ***********.***********

39. spacer 1.29|1901231|32|NZ_CP008925|PILER-CR matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 2, identity: 0.938

actgaatccctcaaccatgagggatgccagtt	CRISPR spacer
actgaatcgctcaaccatgaaggatgccagtt	Protospacer
******** ***********.***********

40. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to NC_011802 (Salmonella enterica bacteriophage SE1, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

41. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to CP051278 (Salmonella phage ST-87, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

42. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to CP051288 (Salmonella phage ST-29, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

43. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to CP051285 (Salmonella phage ST-32, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

44. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to NC_014900 (Salmonella phage ST160, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

45. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to CP051272 (Salmonella phage SW-70, complete genome) position: , mismatch: 2, identity: 0.952

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
***************************** *******.****

46. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_006949 (Enterobacteria phage ES18, complete genome) position: , mismatch: 3, identity: 0.906

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgactc	Protospacer
. .*****************************

47. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AY736146 (Salmonella typhimurium bacteriophage ES18, complete sequence) position: , mismatch: 3, identity: 0.906

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgactc	Protospacer
. .*****************************

48. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 3, identity: 0.906

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgactc	Protospacer
. .*****************************

49. spacer 2.10|1919791|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035200 (Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence) position: , mismatch: 4, identity: 0.875

tcattatcaaagacccagccgaactcgccgcc	CRISPR spacer
tggttatcaaacacccagccgaactcaccgcc	Protospacer
* .******** **************.*****

50. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to CP053324 (Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgcctc	Protospacer
. .************************* ***

51. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

52. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

53. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

54. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggcggactc	Protospacer
 ..*********************** *****

55. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to JQ182733 (Enterobacterial phage mEp213, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgcctc	Protospacer
. .************************* ***

56. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

57. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

58. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

59. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

60. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggcggactc	Protospacer
 ..*********************** *****

61. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

62. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggcggactc	Protospacer
 ..*********************** *****

63. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattggtctgactc	Protospacer
 ..********************* *******

64. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

65. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

66. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattggtctgactc	Protospacer
 ..********************* *******

67. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggcggactc	Protospacer
 ..*********************** *****

68. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattggtctgactc	Protospacer
 ..********************* *******

69. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_019706 (Enterobacteria phage mEp043 c-1, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgcctc	Protospacer
. .************************* ***

70. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

71. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to EU570103 (Salmonella phage epsilon34, complete genome) position: , mismatch: 4, identity: 0.875

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgtctc	Protospacer
. .************************* ***

72. spacer 2.10|1919791|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040809 (Escherichia fergusonii strain EFCF056 plasmid pEF04, complete sequence) position: , mismatch: 5, identity: 0.844

tcattatcaaagacccagccgaactcgccgcc	CRISPR spacer
tcattatcaaacacccagccaaactcccgccc	Protospacer
*********** ********.***** *  **

73. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

74. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

75. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

76. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

77. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

78. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

79. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

80. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttatcgatgttgctcattgggctgtctc	Protospacer
. .***.********************* ***

81. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

82. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

83. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttatcgatgttgctcattgggctgtctc	Protospacer
. .***.********************* ***

84. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttatcgatgttgctcattgggctgtctc	Protospacer
. .***.********************* ***

85. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

86. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to EU570103 (Salmonella phage epsilon34, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgtcgatgttgctcattgggctggccc	Protospacer
 ..*************************.*.*

87. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggcggcctc	Protospacer
. .*********************** * ***

88. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgcccc	Protospacer
. .************************* *.*

89. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgcccc	Protospacer
. .************************* *.*

90. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggcagcctc	Protospacer
. .*********************** * ***

91. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ccgtttgtcgatgttgctcattgggcggcctc	Protospacer
. .*********************** * ***

92. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MG969415 (UNVERIFIED: Salmonella phage GE_vB_TR, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
acgtttgtcgatgttgctcattgggctggccc	Protospacer
  .*************************.*.*

93. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gcgtttgtcgatgttgctcattgggcggcctc	Protospacer
  .*********************** * ***

94. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ccgtttgtcgatgttgctcattgggcggcctc	Protospacer
. .*********************** * ***

95. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ccgtttgtcgatgttgctcattgggcggcctc	Protospacer
. .*********************** * ***

96. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to JQ182730 (Enterobacteria phage mEp237, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
acgtttgtcgatgttgctcattgggcggcctc	Protospacer
  .*********************** * ***

97. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ccgtttgtcgatgttgctcattgggcggcctc	Protospacer
. .*********************** * ***

98. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ccgtttgtcgatgttgctcattgggcggcctc	Protospacer
. .*********************** * ***

99. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ccgtttgtcgatgttgctcattgggcggcctc	Protospacer
. .*********************** * ***

100. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_031077 (Enterobacter phage Tyrion, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggcggcctc	Protospacer
. .*********************** * ***

101. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggcagcctc	Protospacer
. .*********************** * ***

102. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 5, identity: 0.844

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggcagcctc	Protospacer
. .*********************** * ***

103. spacer 1.11|1901593|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MN693712 (Marine virus AFVG_250M462, complete genome) position: , mismatch: 6, identity: 0.812

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
tcatcgaaaaacaaaatcaaataaaaaataaa	Protospacer
 .**. ******** ***.*************

104. spacer 1.24|1902386|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP012699 (Microbacterium sp. No. 7 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.812

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggagaacgatggcagaagagttcgcgggcaag	Protospacer
**   * ******************.** ***

105. spacer 1.35|1901597|32|NZ_CP008925|PILER-CR matches to MN693712 (Marine virus AFVG_250M462, complete genome) position: , mismatch: 6, identity: 0.812

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
tcatcgaaaaacaaaatcaaataaaaaataaa	Protospacer
 .**. ******** ***.*************

106. spacer 1.48|1902390|32|NZ_CP008925|PILER-CR matches to NZ_CP012699 (Microbacterium sp. No. 7 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.812

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggagaacgatggcagaagagttcgcgggcaag	Protospacer
**   * ******************.** ***

107. spacer 2.6|1919547|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to CP053405 (Salmonella enterica strain 2010K-2057 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tttgtgctgataaaatttaatttccgggttgt	CRISPR spacer
cgattgctgataaaattttatttccgggttat	Protospacer
.   ************** ***********.*

108. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
gagtttgttgatgttgctcattgggctggccc	Protospacer
 ..*****.*******************.*.*

109. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgctcc	Protospacer
. .************************* ..*

110. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctgccct	Protospacer
. .************************* *..

111. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctccccc	Protospacer
. .************************  *.*

112. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_010393 (Phage Gifsy-2, complete genome) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ccgtttgtcgatgttgctcattgggctccccc	Protospacer
. .************************  *.*

113. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ccgtttgtcgatgttgctcattgggctccccc	Protospacer
. .************************  *.*

114. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_013059 (Salmonella phage c341, complete genome) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
cctgttgtcgatgttgctcattgggctggccc	Protospacer
.   ************************.*.*

115. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to FJ000341 (Salmonella phage g341c, complete genome) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
cctgttgtcgatgttgctcattgggctggccc	Protospacer
.   ************************.*.*

116. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 6, identity: 0.812

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttatcgatgttgctcattgggctggccc	Protospacer
. .***.*********************.*.*

117. spacer 2.20|1920401|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011413 (Sedimenticola thiotaurini strain SIP-G1 plasmid, complete sequence) position: , mismatch: 6, identity: 0.812

accgcctggcgaatcaatatcca---gcaagatcc	CRISPR spacer
accccctggcgattcaatatccacgtgcatga---	Protospacer
*** ******** **********   *** **

118. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to NC_016160 (Escherichia phage HK75, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

119. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to NC_019705 (Enterobacteria phage mEpX2, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

120. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to KY979108 (Escherichia phage ECP1, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

121. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

122. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

123. spacer 3.1|4182067|42|NZ_CP008925|CRISPRCasFinder matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 6, identity: 0.857

gtccaacgcaaacaccagtaatgacgcggctcacagcaaatg	CRISPR spacer
gtccaacgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
***********************.******** ****..* .

124. spacer 1.6|1901288|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MN045230 (Klebsiella phage Magnus, complete genome) position: , mismatch: 7, identity: 0.781

-agatatgcatttgctgtatttattaaacattt	CRISPR spacer
atgttacac-tttgctgtatttcttaaacaatt	Protospacer
  * **..* ************ ******* **

125. spacer 1.22|1902264|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtgtttttttgctctgtaccgttgcggagc	CRISPR spacer
gcgtgtttttttcttctgtaccgatcccgtgg	Protospacer
************ .********* * * * *

126. spacer 1.24|1902386|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

127. spacer 1.24|1902386|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP023069 (Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

128. spacer 1.24|1902386|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

129. spacer 1.24|1902386|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

130. spacer 1.24|1902386|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

131. spacer 1.24|1902386|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP029233 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

132. spacer 1.30|1901292|32|NZ_CP008925|PILER-CR matches to MN045230 (Klebsiella phage Magnus, complete genome) position: , mismatch: 7, identity: 0.781

-agatatgcatttgctgtatttattaaacattt	CRISPR spacer
atgttacac-tttgctgtatttcttaaacaatt	Protospacer
  * **..* ************ ******* **

133. spacer 1.46|1902268|32|NZ_CP008925|PILER-CR matches to NC_015851 (Acidithiobacillus caldus SM-1 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781

gcgtgtttttttgctctgtaccgttgcggagc	CRISPR spacer
gcgtgtttttttcttctgtaccgatcccgtgg	Protospacer
************ .********* * * * *

134. spacer 1.48|1902390|32|NZ_CP008925|PILER-CR matches to NZ_CP029453 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

135. spacer 1.48|1902390|32|NZ_CP008925|PILER-CR matches to NZ_CP023069 (Ensifer sojae CCBAU 05684 plasmid pSJ05684a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

136. spacer 1.48|1902390|32|NZ_CP008925|PILER-CR matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

137. spacer 1.48|1902390|32|NZ_CP008925|PILER-CR matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

138. spacer 1.48|1902390|32|NZ_CP008925|PILER-CR matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

139. spacer 1.48|1902390|32|NZ_CP008925|PILER-CR matches to NZ_CP029233 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436a, complete sequence) position: , mismatch: 7, identity: 0.781

ggttcaggatggcagaagagttcgcagggaag	CRISPR spacer
ggttcagcatggaagaagagttcgaatccaaa	Protospacer
******* **** *********** *   **.

140. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 7, identity: 0.781

tgcgacccggccggaccgggcaccattaccac	CRISPR spacer
agcaccgaggccggaccgtgcaccatttccac	Protospacer
 **. *  ********** ******** ****

141. spacer 2.10|1919791|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045514 (Salmonella enterica subsp. enterica serovar Anatum strain Sal-3948 plasmid p77k, complete sequence) position: , mismatch: 7, identity: 0.781

tcattatcaaagacccagccgaac-tcgccgcc	CRISPR spacer
tcattatcaaacacccagccaaacggcactgt-	Protospacer
*********** ********.***  *.*.*.

142. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_004775 (Enterobacteria phage epsilon15, complete genome) position: , mismatch: 7, identity: 0.781

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcattgggctactcc	Protospacer
. .************************. ..*

143. spacer 2.18|1920279|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 7, identity: 0.781

ttcacttggcaaattttaagccgcatttcata	CRISPR spacer
tggacttgacaaatttttagccgcattggatc	Protospacer
*  *****.******** *********  **

144. spacer 1.9|1901471|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.75

gaataagccggtgtaggtttcgggtgcgtgat	CRISPR spacer
ggcgcagccggtggaggtttcgggtgcgtcgc	Protospacer
*.   ******** *************** ..

145. spacer 1.11|1901593|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP043618 (Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
aaattcaaaaacaatatcaaaaaaattatcgg	Protospacer
* ****************.** ***  ** ..

146. spacer 1.11|1901593|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP043618 (Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
aaattcaaaaacaatatcaaaaaaattatcgg	Protospacer
* ****************.** ***  ** ..

147. spacer 1.16|1901898|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MT457553 (Shewanella phage Thanatos-2, complete genome) position: , mismatch: 8, identity: 0.75

taaccgcgggtatcgatatgcagatcgaccga	CRISPR spacer
tcattttgggtatcgatatgcaaattgaccaa	Protospacer
* *.. .***************.**.****.*

148. spacer 1.16|1901898|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MT457552 (Shewanella phage Thanatos-1, complete genome) position: , mismatch: 8, identity: 0.75

taaccgcgggtatcgatatgcagatcgaccga	CRISPR spacer
tcattttgggtatcgatatgcaaattgaccaa	Protospacer
* *.. .***************.**.****.*

149. spacer 1.25|1902447|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP051681 (Cohnella sp. MFER-1 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

taattctgaaggggggcgaggcagttccggtg	CRISPR spacer
tcggtctgaagcggggcgaggcatttcagcag	Protospacer
* . ******* *********** *** *  *

150. spacer 1.33|1901475|32|NZ_CP008925|PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.75

gaataagccggtgtaggtttcgggtgcgtgat	CRISPR spacer
ggcgcagccggtggaggtttcgggtgcgtcgc	Protospacer
*.   ******** *************** ..

151. spacer 1.35|1901597|32|NZ_CP008925|PILER-CR matches to NZ_CP043618 (Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
aaattcaaaaacaatatcaaaaaaattatcgg	Protospacer
* ****************.** ***  ** ..

152. spacer 1.35|1901597|32|NZ_CP008925|PILER-CR matches to NZ_CP043618 (Sulfurimonas sp. GYSZ_1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
aaattcaaaaacaatatcaaaaaaattatcgg	Protospacer
* ****************.** ***  ** ..

153. spacer 1.40|1901902|32|NZ_CP008925|PILER-CR matches to MT457553 (Shewanella phage Thanatos-2, complete genome) position: , mismatch: 8, identity: 0.75

taaccgcgggtatcgatatgcagatcgaccga	CRISPR spacer
tcattttgggtatcgatatgcaaattgaccaa	Protospacer
* *.. .***************.**.****.*

154. spacer 1.40|1901902|32|NZ_CP008925|PILER-CR matches to MT457552 (Shewanella phage Thanatos-1, complete genome) position: , mismatch: 8, identity: 0.75

taaccgcgggtatcgatatgcagatcgaccga	CRISPR spacer
tcattttgggtatcgatatgcaaattgaccaa	Protospacer
* *.. .***************.**.****.*

155. spacer 1.49|1902451|32|NZ_CP008925|PILER-CR matches to NZ_CP051681 (Cohnella sp. MFER-1 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

taattctgaaggggggcgaggcagttccggtg	CRISPR spacer
tcggtctgaagcggggcgaggcatttcagcag	Protospacer
* . ******* *********** *** *  *

156. spacer 2.1|1919242|32|NZ_CP008925|CRISPRCasFinder,CRT matches to JX434031 (Pseudomonas phage JBD24, complete genome) position: , mismatch: 8, identity: 0.75

taact--catcacatccgcgtcagacctcgtgac	CRISPR spacer
--actgccatcacattcgcggcagacctcgccga	Protospacer
  ***  ********.**** *********. .

157. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

158. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

159. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

160. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

161. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

162. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

163. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

164. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcaccattaccac--	CRISPR spacer
ggcggcccggccggaccgggccccg--gccagga	Protospacer
 ***.**************** **.  .***

165. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

166. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

167. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

168. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

169. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

170. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

171. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

172. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

173. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

174. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

175. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

176. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

177. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

178. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

179. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

180. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgacccggccggaccgggcacc-attaccac	CRISPR spacer
cgcgacccagccgaaccgggcaccggtcgaca-	Protospacer
.*******.****.********** .*.. **

181. spacer 2.4|1919425|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594663 (Variovorax sp. RA8 plasmid 2) position: , mismatch: 8, identity: 0.75

gcccatcatcccctgcggcgcgcatttttccg	CRISPR spacer
gcccgtcatcccctgctgcgcgcagctcagcc	Protospacer
****.*********** ******* .*.  *

182. spacer 2.6|1919547|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_048053 (Dickeya phage vB_DsoM_JA29, complete genome) position: , mismatch: 8, identity: 0.75

tttgtgctgataaaatttaatttccgggttgt	CRISPR spacer
attgttctgatgaaatttaatttcaatgttcc	Protospacer
 **** *****.************ . *** .

183. spacer 2.6|1919547|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH389777 (Dickeya phage vB_DsoM_JA11, complete genome) position: , mismatch: 8, identity: 0.75

tttgtgctgataaaatttaatttccgggttgt	CRISPR spacer
attgttctgatgaaatttaatttcaatgttcc	Protospacer
 **** *****.************ . *** .

184. spacer 2.6|1919547|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH460462 (Dickeya phage vB_DsoM_JA33, complete genome) position: , mismatch: 8, identity: 0.75

tttgtgctgataaaatttaatttccgggttgt	CRISPR spacer
attgttctgatgaaatttaatttcaatgttcc	Protospacer
 **** *****.************ . *** .

185. spacer 2.6|1919547|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to MH460460 (Dickeya phage vB_DsoM_JA13, complete genome) position: , mismatch: 8, identity: 0.75

tttgtgctgataaaatttaatttccgggttgt	CRISPR spacer
attgttctgatgaaatttaatttcaatgttcc	Protospacer
 **** *****.************ . *** .

186. spacer 2.10|1919791|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007767 (Campylobacter peloridis LMG 23910 plasmid pPEL1, complete sequence) position: , mismatch: 8, identity: 0.75

tcattatcaaagacccagccgaactcgccgcc	CRISPR spacer
tcattatcaaacacccagccaaattgttttcc	Protospacer
*********** ********.**.*  .. **

187. spacer 2.10|1919791|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_012040 (Campylobacter lari RM2100 plasmid pCL2100, complete sequence) position: , mismatch: 8, identity: 0.75

tcattatcaaagacccagccgaactcgccgcc	CRISPR spacer
tcattatcaaacacccagccaaattgttttcc	Protospacer
*********** ********.**.*  .. **

188. spacer 2.10|1919791|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044261 (Campylobacter armoricus strain CA639 plasmid pCA639-1, complete sequence) position: , mismatch: 8, identity: 0.75

tcattatcaaagacccagccgaactcgccgcc	CRISPR spacer
tcattatcaaacacccagccaaattgttttcc	Protospacer
*********** ********.**.*  .. **

189. spacer 2.14|1920035|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG813238 (Erwinia amylovora strain 692 plasmid pEA68, complete sequence) position: , mismatch: 8, identity: 0.75

tccgagggcggcgatctgcgaaacggggttgc	CRISPR spacer
gtcgagggcggcgaactgcgcaacggtgagcc	Protospacer
 .************ ***** ***** *   *

190. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KC911857 (Salmonella phage SPC32N, complete genome) position: , mismatch: 8, identity: 0.75

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
cggacctttgatgttgctcattgggctgtctc	Protospacer
.*. .. *.******************* ***

191. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to KC911856 (Salmonella phage SPC32H, complete genome) position: , mismatch: 8, identity: 0.75

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
cggacctttgatgttgctcattgggctgtctc	Protospacer
.*. .. *.******************* ***

192. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_016761 (Salmonella phage SPN1S, complete genome) position: , mismatch: 8, identity: 0.75

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
cggacctttgatgttgctcattgggctgtctc	Protospacer
.*. .. *.******************* ***

193. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to JQ691610 (Salmonella phage SPN9TCW, complete genome) position: , mismatch: 8, identity: 0.75

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
cggacctttgatgttgctcattgggctgtctc	Protospacer
.*. .. *.******************* ***

194. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 8, identity: 0.75

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
atgtttgtcgatgttgctcattgggcgcccct	Protospacer
  .***********************   *..

195. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 8, identity: 0.75

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttatcgatgttgctcattgggctactcc	Protospacer
. .***.********************. ..*

196. spacer 1.11|1901593|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NC_015704 (Runella slithyformis DSM 19594 plasmid pRUNSL02, complete sequence) position: , mismatch: 9, identity: 0.719

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
caattcaaaaacaatattaaataaactatttt	Protospacer
  ***************..******  **

197. spacer 1.11|1901593|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MH572349 (Microviridae sp. isolate SD_SC_70, complete genome) position: , mismatch: 9, identity: 0.719

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
caaacctaaatcaatatggaataaaaaatatg	Protospacer
  * .* *** ****** ************ .

198. spacer 1.12|1901654|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MH598805 (Pelagibacter phage HTVC109P, complete genome) position: , mismatch: 9, identity: 0.719

cgtgttgatcatctcccaatgttccagcatca	CRISPR spacer
tgttacctacatctcctaatgttccatcatca	Protospacer
.**  .   *******.********* *****

199. spacer 1.15|1901837|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 9, identity: 0.719

cttagggaaatctcccgttatcgtcttctgtg	CRISPR spacer
gggagggaagtcgcccgttatcgtctttcccg	Protospacer
   ******.** **************.. .*

200. spacer 1.15|1901837|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 9, identity: 0.719

cttagggaaatctcccgttatcgtcttctgtg	CRISPR spacer
gggagggaagtcgcccgttatcgtctttcccg	Protospacer
   ******.** **************.. .*

201. spacer 1.16|1901898|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 9, identity: 0.719

taaccgcgggtatcgatatgcagatcgaccga	CRISPR spacer
tcgaagcgggtatcgacatgccgatcgacgcg	Protospacer
* .  ***********.**** *******  .

202. spacer 1.35|1901597|32|NZ_CP008925|PILER-CR matches to NC_015704 (Runella slithyformis DSM 19594 plasmid pRUNSL02, complete sequence) position: , mismatch: 9, identity: 0.719

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
caattcaaaaacaatattaaataaactatttt	Protospacer
  ***************..******  **

203. spacer 1.35|1901597|32|NZ_CP008925|PILER-CR matches to MH572349 (Microviridae sp. isolate SD_SC_70, complete genome) position: , mismatch: 9, identity: 0.719

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
caaacctaaatcaatatggaataaaaaatatg	Protospacer
  * .* *** ****** ************ .

204. spacer 1.36|1901658|32|NZ_CP008925|PILER-CR matches to MH598805 (Pelagibacter phage HTVC109P, complete genome) position: , mismatch: 9, identity: 0.719

cgtgttgatcatctcccaatgttccagcatca	CRISPR spacer
tgttacctacatctcctaatgttccatcatca	Protospacer
.**  .   *******.********* *****

205. spacer 1.39|1901841|32|NZ_CP008925|PILER-CR matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 9, identity: 0.719

cttagggaaatctcccgttatcgtcttctgtg	CRISPR spacer
gggagggaagtcgcccgttatcgtctttcccg	Protospacer
   ******.** **************.. .*

206. spacer 1.39|1901841|32|NZ_CP008925|PILER-CR matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 9, identity: 0.719

cttagggaaatctcccgttatcgtcttctgtg	CRISPR spacer
gggagggaagtcgcccgttatcgtctttcccg	Protospacer
   ******.** **************.. .*

207. spacer 1.40|1901902|32|NZ_CP008925|PILER-CR matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 9, identity: 0.719

taaccgcgggtatcgatatgcagatcgaccga	CRISPR spacer
tcgaagcgggtatcgacatgccgatcgacgcg	Protospacer
* .  ***********.**** *******  .

208. spacer 2.6|1919547|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 9, identity: 0.719

tttgtgctgataaaatttaatttccgggttgt	CRISPR spacer
tttttgctgataaagtttaatttctcgccaag	Protospacer
*** **********.*********. * . .

209. spacer 2.9|1919730|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029540 (Aquitalea sp. USM4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

atgatccagatgtaaaagaaaaggcattcaga	CRISPR spacer
ccaatccagatgcaaaagaaaaagcatttcac	Protospacer
 ..*********.*********.*****. .

210. spacer 2.9|1919730|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

atgatccagatgtaaaagaaaaggcattcaga	CRISPR spacer
atgttccagatgtaaaagaataggaacaagag	Protospacer
*** **************** *** *.  ...

211. spacer 2.9|1919730|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to CP047483 (Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence) position: , mismatch: 9, identity: 0.719

atgatccagatgtaaaagaaaaggcattcaga	CRISPR spacer
taaatccaaatctaaaagaaaaggcaataaat	Protospacer
  .*****.** ************** * *.

212. spacer 2.9|1919730|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044170 (Campylobacter jejuni strain AR-0413 plasmid pAR-0413-1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatccagatgtaaaagaaaaggcattcaga	CRISPR spacer
taaatccaaatctaaaagaaaaggcactaaat	Protospacer
  .*****.** **************.* *.

213. spacer 2.9|1919730|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 9, identity: 0.719

atgatccagatgtaaaagaaaaggcattcaga	CRISPR spacer
atgatgcagatgcaaaagaaaagcaggaaaaa	Protospacer
***** ******.**********  .   *.*

214. spacer 2.14|1920035|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028352 (Pantoea vagans strain PV989 plasmid pPV989-94, complete sequence) position: , mismatch: 9, identity: 0.719

tccgagggcggcgatctgcgaaacggggttgc	CRISPR spacer
gtggagggcggcgaactgcgcaacggtgaacc	Protospacer
 . *********** ***** ***** *   *

215. spacer 2.14|1920035|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035035 (Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tccgagggcggcgatctgcgaaacggggttgc	CRISPR spacer
gtggagggcggtgagctgcgaaacggcgagcc	Protospacer
 . ********.** *********** *   *

216. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NC_010333 (Caulobacter sp. K31 plasmid pCAUL02, complete sequence) position: , mismatch: 9, identity: 0.719

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
cgtcccgtcgatgttgctgatcgggctgacca	Protospacer
.* ...************ **.********.

217. spacer 2.16|1920157|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 9, identity: 0.719

tgatttgtcgatgttgctcattgggctgactc	CRISPR spacer
ctgtttgtcgatgttgctcatagcgcggctcc	Protospacer
. .****************** * ** * ..*

218. spacer 1.11|1901593|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP015356 (Bacillus thuringiensis strain MYBT18246 plasmid p101287, complete sequence) position: , mismatch: 10, identity: 0.688

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
gagagtcacaacaagagcgaataaaaaataaa	Protospacer
. .  . * ***** * ***************

219. spacer 1.11|1901593|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 10, identity: 0.688

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
tagaagaaaaacaaaattgaataaaaaattta	Protospacer
  .   ******** **.***********  *

220. spacer 1.11|1901593|32|NZ_CP008925|CRISPRCasFinder,CRT matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 10, identity: 0.688

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
tagaagaaaaacaaaattgaataaaaaattta	Protospacer
  .   ******** **.***********  *

221. spacer 1.19|1902081|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_CP028488 (Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tacctcaccctgatccgtgtcggacgaggctg	CRISPR spacer
aggcattgtctgatccgtatcgtacgaggctg	Protospacer
 . * .  .*********.*** *********

222. spacer 1.35|1901597|32|NZ_CP008925|PILER-CR matches to NZ_CP015356 (Bacillus thuringiensis strain MYBT18246 plasmid p101287, complete sequence) position: , mismatch: 10, identity: 0.688

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
gagagtcacaacaagagcgaataaaaaataaa	Protospacer
. .  . * ***** * ***************

223. spacer 1.35|1901597|32|NZ_CP008925|PILER-CR matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 10, identity: 0.688

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
tagaagaaaaacaaaattgaataaaaaattta	Protospacer
  .   ******** **.***********  *

224. spacer 1.35|1901597|32|NZ_CP008925|PILER-CR matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 10, identity: 0.688

atattcaaaaacaatatcgaataaaaaataaa	CRISPR spacer
tagaagaaaaacaaaattgaataaaaaattta	Protospacer
  .   ******** **.***********  *

225. spacer 1.43|1902085|32|NZ_CP008925|PILER-CR matches to NZ_CP028488 (Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tacctcaccctgatccgtgtcggacgaggctg	CRISPR spacer
aggcattgtctgatccgtatcgtacgaggctg	Protospacer
 . * .  .*********.*** *********

226. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 10, identity: 0.688

tgcgacccggccggaccgggcaccattaccac	CRISPR spacer
atcgacccggccggaacgggcgccaagggggc	Protospacer
  ************* *****.***  .  .*

227. spacer 2.2|1919303|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045421 (Maribius sp. THAF1 plasmid pTHAF1_a, complete sequence) position: , mismatch: 10, identity: 0.688

tgcgacccggccggaccgggcaccattaccac	CRISPR spacer
gacccaccggccggaccggacaccatcactgg	Protospacer
 .*   *************.******.**..

228. spacer 2.14|1920035|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 10, identity: 0.688

tccgagggcggcgatctgcgaaacggggttgc	CRISPR spacer
ggagagggcggcgatctgcggatcggtggaat	Protospacer
   *****************.* *** *  ..

229. spacer 2.14|1920035|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 10, identity: 0.688

tccgagggcggcgatctgcgaaacggggttgc	CRISPR spacer
agagagggcggcgatctgcggatcggtggaat	Protospacer
   *****************.* *** *  ..

230. spacer 1.1|1900983|32|NZ_CP008925|CRISPRCasFinder,CRT matches to CP054927 (Streptomyces fulvissimus strain NA06532 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ttttcagcccttgccgactgcggaacgcccct	CRISPR spacer
cgccgcacccttgccgactgcgggatgcccga	Protospacer
. ..  .****************.*.****

231. spacer 1.12|1901654|32|NZ_CP008925|CRISPRCasFinder,CRT matches to KJ019071 (Synechococcus phage ACG-2014g isolate Syn7803US105, complete genome) position: , mismatch: 11, identity: 0.656

cgtgttgatcatctcccaatgttccagcatca	CRISPR spacer
gaatttgaacatctcccaatgttacaggtggg	Protospacer
 .  **** ************** ***    .

232. spacer 1.36|1901658|32|NZ_CP008925|PILER-CR matches to KJ019071 (Synechococcus phage ACG-2014g isolate Syn7803US105, complete genome) position: , mismatch: 11, identity: 0.656

cgtgttgatcatctcccaatgttccagcatca	CRISPR spacer
gaatttgaacatctcccaatgttacaggtggg	Protospacer
 .  **** ************** ***    .

233. spacer 2.6|1919547|32|NZ_CP008925|CRISPRCasFinder,CRT,PILER-CR matches to AP014501 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 11, identity: 0.656

tttgtgctgataaaatttaatttccgggttgt	CRISPR spacer
caatcataaatgaaattttatttccgggttgt	Protospacer
.   ... .**.****** *************

234. spacer 1.20|1902142|32|NZ_CP008925|CRISPRCasFinder,CRT matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 19, identity: 0.406

acctgagttaaagccgccaggcggcggcgcgt-----	CRISPR spacer
-----gtgcgccgccgccaggcggttttaagagcctc	Protospacer
     .  ..  ************.  .. *

235. spacer 1.44|1902146|32|NZ_CP008925|PILER-CR matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 19, identity: 0.406

acctgagttaaagccgccaggcggcggcgcgt-----	CRISPR spacer
-----gtgcgccgccgccaggcggttttaagagcctc	Protospacer
     .  ..  ************.  .. *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

130397 : 180329

Salmonella_phage(62.69%)

protease,terminase,tail,capsid,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023234528.1\|130397_131693_-	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	1.7e-180	69.9
WP_001856431.1\|131738_131984_-	excisionase family protein	Q8W657	Enterobacteria_phage	9.4e-27	66.7
WP_023234529.1\|132089_132413_-	hypothetical protein	NA	NA	NA	NA
WP_000487123.1\|132422_132665_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_023205219.1\|132627_133701_-	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	5.4e-143	68.2
WP_000200029.1\|133700_133922_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	1.6e-14	54.3
WP_023216154.1\|134212_134764_-	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	1.8e-57	60.0
WP_000870087.1\|134760_134928_-	hypothetical protein	G8C7S7	Escherichia_phage	1.9e-15	74.1
WP_001275767.1\|134927_135212_-	hypothetical protein	NA	NA	NA	NA
WP_042848110.1\|135713_136172_-	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	1.4e-71	90.3
WP_075696912.1\|136172_136880_-	recombinase	I6R0N0	Salmonella_phage	1.6e-135	98.3
WP_000902091.1\|136876_137020_-	hypothetical protein	I6S1M5	Salmonella_phage	4.2e-19	100.0
WP_000156731.1\|137009_137198_-	DUF5444 family protein	I6S647	Salmonella_phage	3.7e-31	100.0
WP_001670815.1\|137178_137352_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	I6R987	Salmonella_phage	8.9e-24	100.0
WP_075696913.1\|137546_138665_-	hypothetical protein	Q5G8T6	Enterobacteria_phage	1.2e-68	72.6
WP_048485658.1\|138748_138943_-	Restriction inhibitor protein ral	E7C9Q6	Salmonella_phage	4.2e-30	98.4
WP_048485659.1\|139021_139405_-	hypothetical protein	C6ZR44	Salmonella_phage	1.2e-36	84.5
WP_000834176.1\|139761_139965_+	hypothetical protein	A0A2H5BFH9	Salmonella_phage	5.9e-27	98.5
WP_000759585.1\|140109_141129_-	ParA family protein	H2BD62	Pseudomonas_phage	3.5e-51	36.0
WP_001104736.1\|141335_141989_-	LexA family transcriptional regulator	I6R0S2	Salmonella_phage	2.3e-128	100.0
WP_001059982.1\|142098_142308_+	helix-turn-helix transcriptional regulator	I6S1U2	Salmonella_phage	2.1e-35	100.0
WP_000424137.1\|142438_142732_+	Regulatory protein CII from phage origin	I6RSP4	Salmonella_phage	4.7e-41	92.8
WP_001244625.1\|142754_143027_+	hypothetical protein	G9L679	Escherichia_phage	7.9e-43	98.9
WP_048485665.1\|143089_143977_+	replication protein	A5VW95	Enterobacteria_phage	1.2e-143	93.5
WP_048485663.1\|143973_145350_+	DNA helicase	A0A075B8G2	Enterobacteria_phage	6.3e-253	99.3
WP_075696914.1\|145423_145864_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	2.5e-78	97.3
WP_000611490.1\|145860_146733_+	phosphoadenosine phosphosulfate reductase family protein	I6R0S6	Salmonella_phage	2.3e-176	99.3
WP_000984218.1\|146729_146903_+	hypothetical protein	I6S1V2	Salmonella_phage	5.8e-31	100.0
WP_000113772.1\|146869_147046_+	NinE family protein	I6RSQ2	Salmonella_phage	4.6e-28	100.0
WP_000924603.1\|147048_147450_+	hypothetical protein	G9L690	Escherichia_phage	8.6e-62	82.7
WP_001108075.1\|147612_148224_+	recombination protein NinG	I6R0S7	Salmonella_phage	1.9e-97	94.6
WP_000188967.1\|148220_148424_+	phage NinH family protein	A0A1R3Y5V4	Salmonella_virus	2.7e-32	98.5
WP_000219136.1\|148404_148584_+	hypothetical protein	A0A1V0E5I7	Salmonella_phage	2.7e-23	94.9
WP_001047565.1\|148580_149354_+	antitermination protein	Q76H66	Enterobacteria_phage	5.3e-132	99.6
WP_000738703.1\|149781_150108_+\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_016048832.1\|151205_151892_+	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	1.6e-124	100.0
WP_000147264.1\|152384_152816_+\|terminase	terminase small subunit	A0A1V0E5Q4	Salmonella_phage	7.6e-72	100.0
WP_000445802.1\|152799_154119_+\|terminase	terminase	H6WRS9	Salmonella_phage	1.9e-262	100.0
WP_020838511.1\|154251_155604_+	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	1.3e-258	99.6
WP_020838512.1\|155557_156517_+\|capsid	minor capsid protein	H6WRT1	Salmonella_phage	4.6e-178	99.7
WP_023205066.1\|156532_157795_+	hypothetical protein	H6WRT2	Salmonella_phage	8.0e-239	99.8
WP_001650234.1\|157807_158254_+	hypothetical protein	H6WRT3	Salmonella_phage	3.1e-76	100.0
WP_000273924.1\|158271_159348_+	hypothetical protein	Q5G8Y0	Enterobacteria_phage	1.4e-207	100.0
WP_001151796.1\|159357_159546_+	hypothetical protein	Q5G8X9	Enterobacteria_phage	2.9e-28	100.0
WP_000633370.1\|159597_159999_+	hypothetical protein	Q5G8X8	Enterobacteria_phage	1.4e-72	100.0
WP_001650231.1\|159998_160178_+	DUF551 domain-containing protein	Q5G8X7	Enterobacteria_phage	2.5e-29	98.3
WP_015976785.1\|160170_160533_+	hypothetical protein	Q5G8X6	Enterobacteria_phage	9.5e-68	100.0
WP_015976786.1\|160540_160936_+	hypothetical protein	Q5G8X5	Enterobacteria_phage	7.2e-69	100.0
WP_023234671.1\|160932_161319_+	hypothetical protein	Q5G8X4	Enterobacteria_phage	2.9e-67	98.4
WP_010835559.1\|161334_162072_+	immunoglobulin domain-containing protein	Q5G8X3	Enterobacteria_phage	2.7e-130	98.8
WP_023205069.1\|162116_162770_+	hypothetical protein	H6WRU2	Salmonella_phage	1.3e-120	99.5
WP_000065269.1\|162991_163720_+	KilA-N domain-containing protein	H6WRU3	Salmonella_phage	3.1e-142	100.0
WP_001260076.1\|163741_164113_-	hypothetical protein	H6WRU4	Salmonella_phage	1.9e-63	99.2
WP_023230837.1\|164033_164291_+	hypothetical protein	H6WRU5	Salmonella_phage	1.0e-39	98.8
WP_000049860.1\|164311_164638_-	Arc family DNA-binding protein	H6WRU6	Salmonella_phage	3.3e-51	100.0
WP_001154344.1\|164748_164922_+	hypothetical protein	H6WRU7	Salmonella_phage	5.8e-23	100.0
WP_001028069.1\|164995_165634_+	hypothetical protein	H6WRU8	Salmonella_phage	2.1e-118	100.0
WP_001187765.1\|165713_166502_+	ORF6N domain-containing protein	H6WRU9	Salmonella_phage	5.2e-127	100.0
WP_117160639.1\|166932_167283_+	hypothetical protein	H6WRV1	Salmonella_phage	5.2e-63	100.0
WP_048485424.1\|167275_167578_+	hypothetical protein	H6WRV2	Salmonella_phage	3.7e-41	90.0
WP_000184444.1\|167667_168522_-	KilA-N domain-containing protein	I6R977	Salmonella_phage	5.2e-56	46.0
WP_023234673.1\|168830_169160_+	hypothetical protein	NA	NA	NA	NA
WP_023234674.1\|169156_169624_+	hypothetical protein	NA	NA	NA	NA
WP_048485422.1\|169683_172080_+\|tail	phage tail protein	F1C5E9	Cronobacter_phage	2.8e-163	52.8
WP_023234676.1\|172080_172479_-	hypothetical protein	Q5G8W7	Enterobacteria_phage	8.5e-70	97.7
WP_023234677.1\|172571_172919_+\|tail	phage tail protein	H6WRV8	Salmonella_phage	8.2e-61	95.7
WP_023234678.1\|172954_173659_+\|tail	phage minor tail protein L	A0A1V0E5N2	Salmonella_phage	1.9e-133	96.2
WP_023234679.1\|173658_174378_+	C40 family peptidase	H6WRW2	Salmonella_phage	1.7e-132	99.1
WP_023234680.1\|174320_174848_+\|tail	tail assembly protein	H6WRW3	Salmonella_phage	2.4e-67	84.5
WP_023234681.1\|174857_178037_+\|tail	phage tail protein	H6WRW4	Salmonella_phage	0.0e+00	93.2
WP_023234682.1\|178045_179005_+	hypothetical protein	H6WRW5	Salmonella_phage	2.8e-183	99.7
WP_023234683.1\|179015_180329_+	hypothetical protein	I6R0Q9	Salmonella_phage	1.1e-140	60.8

DBSCAN-SWA_2

910516 : 920464

Salmonella_phage(36.36%)

tail,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060710283.1\|910516_911011_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.4e-13	31.5
WP_023234313.1\|911169_911331_-	isocitrate dehydrogenase	Q77Z09	Phage_21	2.9e-08	63.0
WP_023234314.1\|911584_912256_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	2.8e-81	60.8
WP_031222499.1\|913068_914184_+	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	3.2e-29	31.9
WP_023234317.1\|914235_914667_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	5.1e-36	51.8
WP_077910631.1\|914669_915452_-\|tail	phage tail protein	A0A0M3ULD8	Salmonella_phage	5.4e-68	88.4
WP_023234318.1\|915451_916132_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	4.9e-126	97.8
WP_023234319.1\|916128_917328_-\|plate	baseplate J/gp47 family protein	A0A0M4RD32	Salmonella_phage	5.0e-214	97.5
WP_023234320.1\|917328_917682_-	hypothetical protein	A0A0M4R339	Salmonella_phage	4.6e-59	96.6
WP_000502119.1\|918558_919017_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_000444509.1\|919213_920464_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6

DBSCAN-SWA_3

1203699 : 1212879

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195340.1\|1203699_1205733_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	6.1e-55	26.9
WP_000703137.1\|1205973_1206432_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_023234558.1\|1206603_1207134_+	YehR family lipoprotein	NA	NA	NA	NA
WP_001598435.1\|1207190_1207658_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.0e-74	91.0
WP_000598637.1\|1207704_1208424_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272850.1\|1208420_1210106_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_023234557.1\|1210328_1211069_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	5.1e-100	87.1
WP_001261696.1\|1211128_1211236_+	protein YohO	NA	NA	NA	NA
WP_000824854.1\|1211216_1211948_-	ABC transporter permease	NA	NA	NA	NA
WP_000569166.1\|1211931_1212879_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8

DBSCAN-SWA_4

1726155 : 1737418

Salmonella_phage(42.86%)

tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023233681.1\|1726155_1728336_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	5.8e-19	34.5
WP_010989057.1\|1728343_1729507_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_000980503.1\|1730057_1730273_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	3.6e-22	70.8
WP_023233680.1\|1730340_1731444_-	phage late control D family protein	E5G6Q3	Salmonella_phage	9.7e-180	87.2
WP_023233679.1\|1731440_1731926_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	9.4e-71	85.1
WP_023233678.1\|1731922_1733479_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	4.3e-165	62.8
WP_023233677.1\|1733640_1734771_+	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	2.4e-40	33.6
WP_023233676.1\|1734727_1735711_+	HNH endonuclease	NA	NA	NA	NA
WP_023207031.1\|1736257_1737418_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.7e-39	36.4

DBSCAN-SWA_5

4153141 : 4211858

Salmonella_phage(60.34%)

protease,portal,tRNA,lysis,integrase,holin,coat

attL 4170656:4170702|attR 4212148:4212194

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023234230.1\|4153141_4154227_-\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_000815601.1\|4154322_4155390_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_000098736.1\|4155386_4155896_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_023234229.1\|4156013_4156736_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_000255991.1\|4156738_4157233_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_000912377.1\|4157405_4158791_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.1e-44	35.5
WP_001143570.1\|4158881_4159430_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_000190278.1\|4159556_4159769_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_000729165.1\|4159770_4160637_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	4.2e-29	36.5
WP_000681035.1\|4161183_4161741_+	type 1 fimbrial protein subunit FimA	NA	NA	NA	NA
WP_000619618.1\|4161815_4162349_+	type 1 fimbrial protein subunit FimI	NA	NA	NA	NA
WP_001675699.1\|4162392_4163085_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_023234228.1\|4163115_4165728_+	fimbrial biogenesis usher protein	NA	NA	NA	NA
WP_023234227.1\|4165742_4166750_+	type 1 fimbrin D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_000603407.1\|4166759_4167278_+	fimbria assembly protein	NA	NA	NA	NA
WP_000801272.1\|4167323_4167956_-	fimbria biosynthesis transcriptional regulator FimZ	NA	NA	NA	NA
WP_023234225.1\|4168559_4169282_-	fimbria biosynthesis regulator FimY	NA	NA	NA	NA
WP_000948629.1\|4169772_4170369_-	fimbria biosynthesis transcriptional regulator FimW	NA	NA	NA	NA
4170656:4170702	attL	NA	NA	NA	NA
WP_023234224.1\|4170715_4171879_-\|integrase	site-specific integrase	B9UDL9	Salmonella_phage	5.2e-224	97.7
WP_109161052.1\|4172648_4173056_-	ead/Ea22-like family protein	C6ZR30	Salmonella_phage	8.8e-38	92.1
WP_023893317.1\|4173112_4173472_-	Eaf protein	T1SA95	Salmonella_phage	8.0e-59	90.8
WP_023234218.1\|4173580_4174198_-	hypothetical protein	Q5G8U6	Enterobacteria_phage	8.0e-67	65.9
WP_023234217.1\|4174194_4174365_-	DUF2737 family protein	I6S642	Salmonella_phage	1.1e-23	96.4
WP_023234216.1\|4174375_4174669_-	DUF2856 family protein	A0A0N7CAQ6	Salmonella_phage	9.4e-50	97.9
WP_023893316.1\|4174684_4175233_-	3'-5' exoribonuclease	C6ZR35	Salmonella_phage	3.0e-105	98.9
WP_048485107.1\|4175241_4175748_-	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	2.3e-91	99.4
WP_052892833.1\|4175748_4176456_-	recombinase	I6R0N0	Salmonella_phage	2.7e-135	98.3
WP_000017617.1\|4176452_4176596_-	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	4.6e-18	95.7
WP_000156731.1\|4176585_4176774_-	DUF5444 family protein	I6S647	Salmonella_phage	3.7e-31	100.0
WP_001200013.1\|4176754_4176907_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	I6R0R7	Salmonella_phage	2.4e-25	100.0
WP_000713611.1\|4177230_4177518_-	hypothetical protein	Q76H36	Enterobacteria_phage	7.8e-49	98.9
WP_001083253.1\|4177551_4178052_-	HNH endonuclease	A5H1L2	Xanthomonas_virus	5.2e-32	44.5
WP_000216186.1\|4178133_4178436_-	hypothetical protein	I6S5Z3	Salmonella_phage	4.5e-47	94.0
WP_000786966.1\|4178795_4179005_+	fumarate hydratase FumD	I6R0R9	Salmonella_phage	2.0e-30	100.0
WP_000841071.1\|4179346_4179865_-	hypothetical protein	I6R9C4	Salmonella_phage	1.9e-85	100.0
WP_000712403.1\|4180066_4180756_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.3e-126	100.0
WP_000182204.1\|4180866_4181082_+	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.3e-32	100.0
WP_001103493.1\|4181192_4181474_+	hypothetical protein	Q76H54	Enterobacteria_phage	1.3e-43	98.9
WP_001125981.1\|4181508_4181655_+	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_000065658.1\|4181647_4182547_+	hypothetical protein	E7C9R4	Salmonella_phage	3.0e-155	98.7
WP_000131496.1\|4182536_4183973_+	AAA family ATPase	E7C9R5	Salmonella_phage	4.1e-271	98.5
WP_000736917.1\|4184049_4184490_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	5.0e-79	97.9
WP_000611490.1\|4184486_4185359_+	phosphoadenosine phosphosulfate reductase family protein	I6R0S6	Salmonella_phage	2.3e-176	99.3
WP_000984218.1\|4185355_4185529_+	hypothetical protein	I6S1V2	Salmonella_phage	5.8e-31	100.0
WP_000113772.1\|4185495_4185672_+	NinE family protein	I6RSQ2	Salmonella_phage	4.6e-28	100.0
WP_000924603.1\|4185674_4186076_+	hypothetical protein	G9L690	Escherichia_phage	8.6e-62	82.7
WP_001108075.1\|4186238_4186850_+	recombination protein NinG	I6R0S7	Salmonella_phage	1.9e-97	94.6
WP_000188967.1\|4186846_4187050_+	phage NinH family protein	A0A1R3Y5V4	Salmonella_virus	2.7e-32	98.5
WP_001047565.1\|4187207_4187981_+	antitermination protein	Q76H66	Enterobacteria_phage	5.3e-132	99.6
WP_000738703.1\|4188407_4188734_+\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_001167376.1\|4188717_4189155_+	lysozyme	Q5G8R3	Enterobacteria_phage	3.6e-69	91.0
WP_000088937.1\|4189151_4189619_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	6.1e-67	88.4
WP_016048832.1\|4189831_4190518_+	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	1.6e-124	100.0
WP_000807793.1\|4190911_4191154_+	DUF2560 family protein	A0A1R3Y5V5	Salmonella_virus	1.7e-36	100.0
WP_023217189.1\|4191156_4191561_+	hypothetical protein	C6ZR73	Salmonella_phage	9.0e-67	98.5
WP_001629224.1\|4191573_4192032_+	hypothetical protein	A0A2P1MXF5	Escherichia_phage	3.3e-49	66.2
WP_023217188.1\|4192031_4193492_+	hypothetical protein	W6MW26	Pseudomonas_phage	3.3e-220	76.5
WP_031601950.1\|4193491_4195669_+\|portal	portal protein	A0A1R3Y5N6	Salmonella_virus	0.0e+00	99.9
WP_023217186.1\|4195682_4196594_+	scaffolding protein	A0A1R3Y5R6	Salmonella_virus	8.3e-161	99.7
WP_023217185.1\|4196593_4197886_+\|coat	coat protein	C6ZR10	Salmonella_phage	1.9e-243	99.5
WP_023217184.1\|4197926_4198487_+	hypothetical protein	C6ZR11	Salmonella_phage	1.8e-102	98.9
WP_001166101.1\|4198470_4198971_+	packaged DNA stabilization gp4 family protein	I1TEJ0	Salmonella_phage	5.5e-90	98.8
WP_023233541.1\|4198930_4200349_+	packaged DNA stabilization protein gp10	I1TEJ1	Salmonella_phage	7.3e-273	98.3
WP_023233542.1\|4200352_4201054_+	hypothetical protein	A0A0M4QWW6	Salmonella_phage	1.7e-73	95.7
WP_000627700.1\|4201053_4201509_+	DUF2824 family protein	A0A1R3Y5P3	Salmonella_virus	1.8e-87	100.0
WP_023233543.1\|4201511_4202204_+	hypothetical protein	A0A0M4RTU3	Salmonella_phage	1.1e-104	95.7
WP_023233544.1\|4202214_4203597_+	DNA transfer protein	A0A192Y834	Salmonella_phage	1.6e-224	92.9
WP_023233545.1\|4203596_4205546_+	hypothetical protein	A0A192Y934	Salmonella_phage	3.7e-283	89.0
WP_000889769.1\|4205563_4205893_-	hypothetical protein	NA	NA	NA	NA
WP_000757527.1\|4205923_4206289_+	hypothetical protein	E7C9U7	Salmonella_phage	8.1e-67	100.0
WP_001085430.1\|4206302_4206482_-	hypothetical protein	B8K1I9	Salmonella_phage	2.1e-28	100.0
WP_000532175.1\|4206581_4206833_-	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	1.4e-38	100.0
WP_023233546.1\|4206968_4208759_+	right-handed parallel beta-helix repeat-containing protein	S4TWS4	Salmonella_phage	1.7e-229	78.5
WP_023233547.1\|4208794_4210585_-	hypothetical protein	NA	NA	NA	NA
WP_023233548.1\|4210581_4211499_-	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	7.5e-162	93.1
WP_023233549.1\|4211495_4211858_-	GtrA family protein	I1TED9	Salmonella_phage	9.2e-55	91.7
4212148:4212194	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4548786 : 4556099

Dickeya_phage(16.67%)

integrase,protease

attL 4550364:4550378|attR 4561604:4561618

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023227176.1\|4548786_4549905_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	8.1e-09	39.8
WP_000125881.1\|4549901_4551848_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.6e-39	42.0
4550364:4550378	attL	NA	NA	NA	NA
WP_000447499.1\|4551977_4552199_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000520789.1\|4552522_4552843_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000934064.1\|4552873_4555150_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_001117984.1\|4555362_4555560_-	hypothetical protein	NA	NA	NA	NA
WP_048484675.1\|4555778_4556099_-\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.0e-17	44.7
4561604:4561618	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008925

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection