CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP019036	Massilia putida strain 6NM-7 plasmid unnamed1, complete sequence	1 crisprs	csa3	1	1
NZ_CP019038	Massilia putida strain 6NM-7 chromosome, complete genome	2 crisprs	csa3,DEDDh,DinG,cas3,RT,WYL,Cas9_archaeal	0	8
NZ_CP019037	Massilia putida strain 6NM-7 plasmid unnamed2, complete sequence	0 crisprs	NA	0	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019036_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019036_1

216-331

Orphan

Consensus_repeat	Method
GTTGCAACCTACTTGCAACCTATCTGCAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019036_1

>merge|NZ_CP019036|1|216-331|CRISPRCasFinder
GCTGCAACTTAGTTGCAACCTACTTGCAACCTATCTGCAACCATCATAGGCCGGTTTTCGGCTGCCCGCAACTTCGTTCGCATGGGTTGCAACCTACTTGCAACCTATCTGCAACC

>NZ_CP019036|1|1|216-331|CRISPRCasFinder
GCTGCAACTTAGTTGCAACCTACTTGCAACC	TATCTGCAACCATCATAGGCCGGTTTTCGGCTGCCCGCAACTTCGTTCGCATGG
GTTGCAACCTACTTGCAACCTATCTGCAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019036.1\|WP_075790647.1\|8601_8865_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019036.1\|WP_075790580.1\|7332_8082_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019036.1\|WP_083684251.1\|10060_10402_-\|antitoxin-VbhA-family-protein	unknown	unknown	gnl\|CDD\|212155
NZ_CP019036.1\|WP_156895462.1\|8129_8594_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019036.1\|WP_156895460.1\|881_3824_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376240
NZ_CP019036.1\|WP_075790646.1\|3919_4834_-\|XamI-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|312917
NZ_CP019036.1\|WP_156895461.1\|4882_6529_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP019036.1\|WP_083684247.1\|505_892_+\|plasmid-mobilization-relaxosome-protein-MobC	unknown	unknown	gnl\|CDD\|368576
NZ_CP019036.1\|WP_075790582.1\|9105_10068_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225095
NZ_CP019036.1\|WP_169926764.1\|6498_6669_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019036.1\|WP_156895460.1\|881_3824_+\|hypothetical-protein	gnl\|CDD\|376240	pfam18821, LPD7, Large polyvalent protein-associated domain 7. This domain contains conserved aspartate and phenylalanine residues. It is widely present in polyvalent proteins and gene neighbourhoods of conjugative elements. This domain is also known as PTox1.	1.03636e-18
NZ_CP019036.1\|WP_075790582.1\|9105_10068_-\|Fic-family-protein	gnl\|CDD\|225095	COG2184, Fic, Protein involved in cell division [Cell division and chromosome partitioning].	6.20064e-20
NZ_CP019036.1\|WP_075790646.1\|3919_4834_-\|XamI-family-restriction-endonuclease	gnl\|CDD\|312917	pfam09572, RE_XamI, XamI restriction endonuclease. This family includes the XamI (recognizes GTCGAC but cleavage site unknown) restriction endonuclease.	1.60739e-59
NZ_CP019036.1\|WP_156895461.1\|4882_6529_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	4.24515e-06
NZ_CP019036.1\|WP_083684247.1\|505_892_+\|plasmid-mobilization-relaxosome-protein-MobC	gnl\|CDD\|368576	pfam05713, MobC, Bacterial mobilisation protein (MobC). This family consists of several bacterial MobC-like, mobilisation proteins. MobC proteins belong to the group of relaxases. Together with MobA and MobB they bind to a single cis-active site of a mobilising plasmid, the origin of transfer (oriT) region. The absence of MobC has several different effects on oriT DNA. Site- and strand-specific nicking by MobA protein is severely reduced, accounting for the lower frequency of mobilisation. The localized DNA strand separation required for this nicking is less affected, but becomes more sensitive to the level of active DNA gyrase in the cell. In addition, strand separation is not efficiently extended through the region containing the nick site. These effects suggest a model in which MobC acts as a molecular wedge for the relaxosome-induced melting of oriT DNA. The effect of MobC on strand separation may be partially complemented by the helical distortion induced by supercoiling. However, MobC extends the melted region through the nick site, thus providing the single-stranded substrate required for cleavage by MobA.	0.00882013
NZ_CP019036.1\|WP_083684251.1\|10060_10402_-\|antitoxin-VbhA-family-protein	gnl\|CDD\|212155	cd11586, VbhA_like, VbhA antitoxin and related proteins. VbhA is the antitoxin to VbhT. The VbhT toxin of the mammalian pathogen Bartonella schoenbuchensis is responsible for the disruptive adenylation of host proteins. VbhT also induces FIC-domain-mediated growth arrest in bacteria; it is inhibited by this antitoxin which binds to block the ATP binding site of the VbhT FIC domain.	1.11406e-09

>NZ_CP019036.1|WP_083684247.1|505_892_+|plasmid-mobilization-relaxosome-protein-MobC
MQLKQEQAMGRRAVGDQKLSKAYSFRLPEDQAAELNAKIVESGLDASVFLRDFVLKNKTTVVVRPKASLEKRRMQFVINKAGNNLNQIAHMLNTANKSQRMTDQLFRQSAAALQEIAKYMKAALDHVD
>NZ_CP019036.1|WP_156895460.1|881_3824_+|hypothetical-protein
MLIRVSGGEEGIKEYLEEGHKQGREFSRDELDERVILAGDLDFTQGIIDRMEPGRERYLHITLAFKEDEIPEETLRAIAEDFRKFLFSAYRDDEYSFYAEAHLPKIKSYEHQSTGETVERKPHIHIVVPKVNLRSGGVLNPPGLVERNEMYVDACQENINNKYGLASPKDNRRVHFTDASDMIQRYRDDNFSGAYKDLKKAILTAVTERDITTYQEFGKLVEEYGATKVRNAGSDTAYFNVKLDVNAKGVNLKDYPFSREFIELPGEEKKRILSAEVQREYEIQGQARKDKGNIDAALNDWHRFRAREIKYVNSGNKKLYQAYRQASPEDREKILDQLATRFYTRYPEPNFEREPFTGKNPFAPDYGFKQPSRSGSEQRDRGELRSTPGRAGYDDRAIDQFGGHPTRDRAPLAAGDFEQKHKLNQEQNHEPERYAGKNRVRYEYGFKRPSGDAGRDTLQDRSERATGRRSAGLGGYGLGVAGRGPGATGRGGNGAFANRADRQYDARSLRQVEQAHSINHLRNVPGGRVVRAREEGSVLLPHHAPDQLGNGRSESDHALRRPRDRQPVRGSGRVNDSVVSQVARDFTERQRASGAGRSPLFQEIKQQLDANRLLAELSRSHGILVDKYEVTSTPDGSARILCGNRHLNVCDFMTKEMRLPWAEASTILQQSYGRQVDRHPGMAPRFPPDPALWRAFQDQRRARGGLRSQLAAQLASERARREAIRLRLSDARSAAAGLPLAQRKAALSVAKMEYVTAESALRSAIRQERAPFRLPVTDQYRQFLQQRAQAGEAAALAELRRRSRSASAPLDPNVGQILPAKAIQEPNGLFYRGREVRFRVRQNGDVIYSLAGRVMIEDKGESVRLLRTERVAIEAALRLAQAKFGDRLKLSGSAEFQQRAARIAAEVGLTVRFDNKQAEQIREQRAAELESQRAAGRRFVEQQKGRQPSQVLPSGRPQLNRGEPDVGSTKPDKNDRDIER
>NZ_CP019036.1|WP_075790646.1|3919_4834_-|XamI-family-restriction-endonuclease
MITPPSWTPDELAASAQIAAANFRNERLSPSAAWGGHFAEARSKFEALFTQLGDLDPRHFTDTTLAGAYREQLGEALRYLAGPPISDDDLKVIADVRSLAPNVLSRNHADVRKVFDVIECVIDEKRFPWVREERAPTPEEKSAALLASSVLLAAQRMATERRNDGKSTQEGMVRDYLRTLGFREVPTTHITTIVKGPGPGEFCAECKLGDRKADIVVRLFDTRLMPIECKVSNSSTNSVKRLNNDAAAKADFWLHEFGKQQVVPAAMLSGVFNKLNLVQAQNRGLTIFWAHDLDRLGEFIHATR
>NZ_CP019036.1|WP_156895461.1|4882_6529_-|class-I-SAM-dependent-methyltransferase
MDTLQKDECMIIQSPATPCFEELFNLPVLVSVAAAIASTSDLTPQEQAVVQAHAAPVSSDLVKFAVDAIRAGTDPLGAAYCIVKSPKERRDTGQTFTPIEAVTGMYSWAEAQGEVARIVDPGAGSGRYVLYGLRRNANAVGVAVETDPLVALLLRANAEALGLTHRLQIHLGDYRTLELDSIDGRTLFIGNPPYVRHHDIEPHWKEWYSSSLKALGHASSQLAGLHLHFFLKTLSLAKQGDLGCFITAAEWLDVNYGQSLRDLLTNGLGGRAVFVVSPEVSVFGDAMVTACITCFAPGANTETIEFKNIASATELLDLSGGHYAEKSRAKSERSWSILLRNTDVARNEGFVSLGDFFQVRRGQVTGMNRVWVMKDNNRFGLPEEFLVPSITDAADIIHAPNNRIDDPSVLKRVVALPASFDELSDHKRGAILDFLEWARSEDADKGFVARNRKPWWRVNMTSIPQVVVTYMGRRPPVFAINTAGAGLINVAHGLYPKVALDPDALEWLVRWLNSNIRQESGRVYAGGLTKFEPSEVMRLQVPGIPMLG
>NZ_CP019036.1|WP_169926764.1|6498_6669_-|hypothetical-protein
MKTDTTSPSKAQPRKIVGLSLSPEVAAELKMEAARRGVSLRALFLEMWTLYKKTSA
>NZ_CP019036.1|WP_075790580.1|7332_8082_+|hypothetical-protein
MHPDYFKAMLVEHYGLDKKVDTSTWNYGLNLANMAAAEGELFDQILESSYTTKLDIFTLWEFVDSVQRNFVPQTLSARLVNDPSNSLVHLRDYYERADDRAPIDIAQLRTLAQAAKLCPHNLLAPSRGPEAEVYFWEYFYEVIRTELFPQAPKRSDSFFLFHDQEAAVEYNLRHEKGEICCRVIVDKVRTMFEGDMTILDETGMDLNFDQAAARIARYWRGELSDRPLIEILFQGTARCGAVVGDFRRS
>NZ_CP019036.1|WP_156895462.1|8129_8594_-|hypothetical-protein
MKIILSAVCGCLFLTGCVNKEQACLDSDRLNFKDPDVVFVANLGTRGLSLNENQFWVRYKAKNSYGAYLQGNMLCGRNEANQYVRLKSDEYLQWMDVKIALWTNIQKGLYSDDREITEGYKRNGEEFVDKMAKEIVFTSPDDLSMYKHDEGTKK
>NZ_CP019036.1|WP_075790647.1|8601_8865_-|hypothetical-protein
MASTAAFAEEYDIAKYCAKVSDTVGGSYQIEQACREQEATSKATLQKMKLPTRIENYCSKVASTIGGSYQIKLACAQQELAARNQIK
>NZ_CP019036.1|WP_075790582.1|9105_10068_-|Fic-family-protein
MTDSKDALRQRLEADLTSTRIAELRLAPVQGKFDVDHLREIHRRIFQDLPSVGFPDATPGQFRPPVDAGVTWMKHRALETMSGPLFVAYSKMDDAAKQRLEEVLQNKSVDALAQLGPKDFAATFGKIYTELDYLHPFLDGNSRTLRSFTSQLAEAAGYTVNWERFSTSPQGRDALYIARDLAVNKLAKPDIEHPNSMMRIVGSMSRLQGHPELSDLLADAIRPGRSVAFERAERDQAVKAHPELAPAYDVLDAASKYMASEGWNAEKTKTALQDVKATLLAKMDAGEIVHYDQRNIEQAKSPVRTTLQQERGTHGPDLER
>NZ_CP019036.1|WP_083684251.1|10060_10402_-|antitoxin-VbhA-family-protein
MIKDEQMVFRVPSDLKAEFQQAANAIERPASQVLREFMRTFISRVNQEQPRGTDSTTIQRQDAINFGRASVALEGMTVSPEAEALQQRFVGGEISIEECIAAIKLGHQVASRD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019036_1	1.1\|247\|54\|NZ_CP019036\|CRISPRCasFinder	247-300	54	NZ_CP019036	Massilia putida strain 6NM-7 plasmid unnamed1, complete sequence	247-300	0	1.0

1. spacer 1.1|247|54|NZ_CP019036|CRISPRCasFinder matches to NZ_CP019036 (Massilia putida strain 6NM-7 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatctgcaaccatcataggccggttttcggctgcccgcaacttcgttcgcatgg	CRISPR spacer
tatctgcaaccatcataggccggttttcggctgcccgcaacttcgttcgcatgg	Protospacer
******************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12484 : 70910

Shigella_phage(25.0%)

tRNA,transposase,integrase

attL 18425:18446|attR 72734:72755

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075790585.1\|12484_13288_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	7.9e-22	34.2
WP_075790649.1\|13390_14680_-	CDF family Co(II)/Ni(II) efflux transporter DmeF	NA	NA	NA	NA
WP_075790586.1\|14762_14939_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_075790587.1\|14944_15220_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA
WP_075790588.1\|15358_16354_-	sodium:calcium antiporter	NA	NA	NA	NA
WP_075790650.1\|16758_17904_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_156895464.1\|18095_18392_+	hypothetical protein	NA	NA	NA	NA
18425:18446	attL	NA	NA	NA	NA
WP_075790590.1\|18445_20383_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_075790591.1\|20451_22332_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_075790592.1\|22351_23407_-	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA
WP_075790593.1\|23387_24701_-	type IV secretion system protein VirB10	NA	NA	NA	NA
WP_075790594.1\|24697_25528_-	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_156895465.1\|25524_26415_-	type IV secretion system protein	NA	NA	NA	NA
WP_169926765.1\|26457_27315_-	type IV secretion system protein	NA	NA	NA	NA
WP_083684272.1\|27457_28108_-	P-type DNA transfer protein VirB5	NA	NA	NA	NA
WP_075790597.1\|28196_30587_-	transporter	NA	NA	NA	NA
WP_075790598.1\|30567_30945_-	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_075790599.1\|30941_31232_-	hypothetical protein	NA	NA	NA	NA
WP_156895476.1\|31252_31882_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_075790601.1\|31893_32199_-	hypothetical protein	NA	NA	NA	NA
WP_083684275.1\|32436_33465_+\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_075790652.1\|33549_34530_-	fatty acid desaturase	NA	NA	NA	NA
WP_075790603.1\|34718_35468_-	autoinducer binding domain-containing protein	NA	NA	NA	NA
WP_075790604.1\|35777_36056_-	hypothetical protein	NA	NA	NA	NA
WP_156895466.1\|36277_36607_-	hypothetical protein	NA	NA	NA	NA
WP_075790606.1\|36697_37354_+	OmpW family protein	NA	NA	NA	NA
WP_075790607.1\|37526_37760_+	hypothetical protein	NA	NA	NA	NA
WP_156895467.1\|37965_39288_+	hypothetical protein	NA	NA	NA	NA
WP_169926766.1\|39836_40634_+	AAA family ATPase	NA	NA	NA	NA
WP_075790609.1\|40637_41783_+	ParB/RepB/Spo0J family partition protein	A0A1C9EHY8	Gordonia_phage	1.1e-05	30.6
WP_083684278.1\|42054_42318_+	hypothetical protein	NA	NA	NA	NA
WP_075790610.1\|42325_42691_+	hypothetical protein	NA	NA	NA	NA
WP_075790611.1\|42919_43069_+\|transposase	transposase	NA	NA	NA	NA
WP_075790612.1\|43372_43744_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075790613.1\|43737_44679_+	hypothetical protein	NA	NA	NA	NA
WP_156895468.1\|44668_45241_+	hypothetical protein	NA	NA	NA	NA
WP_075790615.1\|45237_45621_+	hypothetical protein	NA	NA	NA	NA
WP_075790616.1\|45617_46778_+	ABC transporter permease	NA	NA	NA	NA
WP_075790617.1\|46770_47433_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-32	40.6
WP_075790618.1\|47472_47973_+	protein-disulfide reductase DsbD N-terminal domain-containing protein	NA	NA	NA	NA
WP_075790619.1\|48255_48831_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.0e-44	51.3
WP_075790620.1\|48811_50470_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_075790621.1\|50459_51431_+	ExeA family protein	NA	NA	NA	NA
WP_075790622.1\|51439_52144_+	hypothetical protein	NA	NA	NA	NA
WP_075790623.1\|52261_52456_+	hypothetical protein	NA	NA	NA	NA
WP_075790624.1\|52452_53337_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.4e-48	42.8
WP_156895470.1\|53374_54154_-	hypothetical protein	NA	NA	NA	NA
WP_156895471.1\|54888_55197_+	hypothetical protein	NA	NA	NA	NA
WP_075790627.1\|55305_56505_-	MFS transporter	NA	NA	NA	NA
WP_083684261.1\|56501_57905_-	bifunctional DedA family/phosphatase PAP2 family protein	NA	NA	NA	NA
WP_075790628.1\|57906_59265_-	sensor histidine kinase N-terminal domain-containing protein	NA	NA	NA	NA
WP_169926767.1\|60067_61432_+	TolC family protein	NA	NA	NA	NA
WP_075790657.1\|62482_65584_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	7.9e-62	23.1
WP_075790630.1\|65965_66523_-	recombinase family protein	A0A0C4UR34	Shigella_phage	8.0e-58	62.4
WP_075790631.1\|66531_67176_-	cation transporter	NA	NA	NA	NA
WP_075790632.1\|67172_67556_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_075790633.1\|67552_67843_-	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_075790634.1\|68000_70910_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	74.6
72734:72755	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP019038

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019038_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019038_1

2148349-2148458

Orphan

Consensus_repeat	Method
CAGAGCCCGGTGTTGCCTTTAAAGGGCTCTGACCCCGG	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP019038_1

>merge|NZ_CP019038|1|2148349-2148458|CRISPRCasFinder
CAGAGCCCGGTGTTGCCTTTAAAGGGCTCTGACCCCGGCTCTCAAAGGTAGCGTATAACGAAGCGAAGGGGTCAGAGCCCGGTGTTGCCTTAAAAGGGCTCTGACCCCGG

>NZ_CP019038|1|1|2148349-2148458|CRISPRCasFinder
CAGAGCCCGGTGTTGCCTTTAAAGGGCTCTGACCCCGG	CTCTCAAAGGTAGCGTATAACGAAGCGAAGGGGT
CAGAGCCCGGTGTTGCCTTAAAAGGGCTCTGACCCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019038.1\|WP_075792564.1\|2155421_2155763_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_CP019038.1\|WP_075792565.1\|2155819_2157082_-\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP019038.1\|WP_075792563.1\|2153783_2155217_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235779
NZ_CP019038.1\|WP_075792553.1\|2142463_2143477_-\|RNA-polymerase-sigma-factor-RpoS	unknown	unknown	gnl\|CDD\|235548
NZ_CP019038.1\|WP_179966285.1\|2148490_2150509_-\|ATP-dependent-DNA-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_CP019038.1\|WP_075792558.1\|2147609_2148218_-\|toll/interleukin-1-receptor-domain-containing-protein	unknown	unknown	gnl\|CDD\|379328
NZ_CP019038.1\|WP_075792550.1\|2135334_2135673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019038.1\|WP_075792566.1\|2157152_2160008_-\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP019038.1\|WP_075792556.1\|2145267_2146005_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP019038.1\|WP_075796318.1\|2152533_2153631_-\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|224402
NZ_CP019038.1\|WP_075796317.1\|2140884_2142270_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP019038.1\|WP_075792552.1\|2138110_2140795_+\|response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_CP019038.1\|WP_075792557.1\|2146089_2147601_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019038.1\|WP_169926860.1\|2151819_2152482_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP019038.1\|WP_075792554.1\|2143486_2144383_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|236782
NZ_CP019038.1\|WP_075792561.1\|2150940_2151711_+\|protein-phosphatase-2C-domain-containing-protein	unknown	unknown	gnl\|CDD\|223704
NZ_CP019038.1\|WP_075792567.1\|2160625_2162056_-\|carboxylesterase-family-protein	unknown	unknown	gnl\|CDD\|225181
NZ_CP019038.1\|WP_075792551.1\|2135761_2137765_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP019038.1\|WP_075792555.1\|2144416_2145271_-\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NZ_CP019038.1\|WP_075792560.1\|2150562_2150763_-\|DUF465-domain-containing-protein	unknown	unknown	gnl\|CDD\|227768

Protein	Function_ID	Function_description	E-value
NZ_CP019038.1\|WP_075792564.1\|2155421_2155763_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	2.89938e-22
NZ_CP019038.1\|WP_075792565.1\|2155819_2157082_-\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP019038.1\|WP_075792563.1\|2153783_2155217_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235779	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated.	0
NZ_CP019038.1\|WP_075792553.1\|2142463_2143477_-\|RNA-polymerase-sigma-factor-RpoS	gnl\|CDD\|235548	PRK05657, PRK05657, RNA polymerase sigma factor RpoS; Validated.	0
NZ_CP019038.1\|WP_179966285.1\|2148490_2150509_-\|ATP-dependent-DNA-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	2.0214e-169
NZ_CP019038.1\|WP_075792558.1\|2147609_2148218_-\|toll/interleukin-1-receptor-domain-containing-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	5.89308e-10
NZ_CP019038.1\|WP_075792566.1\|2157152_2160008_-\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP019038.1\|WP_075792556.1\|2145267_2146005_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	6.59309e-140
NZ_CP019038.1\|WP_075796318.1\|2152533_2153631_-\|cell-division-protein-ZapE	gnl\|CDD\|224402	COG1485, COG1485, Predicted ATPase [General function prediction only].	1.46019e-169
NZ_CP019038.1\|WP_075796317.1\|2140884_2142270_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP019038.1\|WP_075792552.1\|2138110_2140795_+\|response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.71125e-53
NZ_CP019038.1\|WP_169926860.1\|2151819_2152482_-\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	0.000212988
NZ_CP019038.1\|WP_075792554.1\|2143486_2144383_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|236782	PRK10871, nlpD, murein hydrolase activator NlpD.	1.14291e-67
NZ_CP019038.1\|WP_075792561.1\|2150940_2151711_+\|protein-phosphatase-2C-domain-containing-protein	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	2.78242e-25
NZ_CP019038.1\|WP_075792567.1\|2160625_2162056_-\|carboxylesterase-family-protein	gnl\|CDD\|225181	COG2272, PnbA, Carboxylesterase type B [Lipid metabolism].	3.96859e-106
NZ_CP019038.1\|WP_075792551.1\|2135761_2137765_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.15255e-45
NZ_CP019038.1\|WP_075792555.1\|2144416_2145271_-\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	2.22908e-77
NZ_CP019038.1\|WP_075792560.1\|2150562_2150763_-\|DUF465-domain-containing-protein	gnl\|CDD\|227768	COG5481, COG5481, Uncharacterized conserved small protein containing a coiled-coil domain [Function unknown].	1.09566e-06

>NZ_CP019038.1|WP_075792558.1|2147609_2148218_-|toll/interleukin-1-receptor-domain-containing-protein
MAIRYGCFFSYAHGRHELMQRFKATLADALRCYLEPYFDNEDELFVDTEQLGGGDDLDRKIARALCESACMVLIYTPKYEAHAYTRREYAAMRLIEAERSTWYTLPSQLIIPVVMTRHPVSLPPQISESTFYVDFSRFTMATADLKSNPDFLPDIDKMVRRIVTHYQYQKKTMPPAHDCNQFVLPAVPPAWRELPDPTFPKK
>NZ_CP019038.1|WP_075792557.1|2146089_2147601_-|hypothetical-protein
METNRITAVPAGQTGEVTTFYSYDSSPARSLALAHAAWLLAGRASAKTPVLMIDWDLEAPGLHHYFPCAEGNHRADGLLELFETCREQLSGNTSNDDADALAARMLDTLDWDDYIVRVDDSRPLYLMRAGRFDDSYGERVDRLDWDALFCACPALFRTFAAHVARRFAHVLIDCRSGRSAAASVCTALLPDKIVGLFTPDARSLDGLQGVVARALDYRCSHEDEQRPLLVYPLPCPVDGAGEARLRWRFGDAQRGQAGYQATLEHMLAECYGLSSVVLDSYLDEVLLPQAAIVGMPPAGGRAQAGEHDRYGPQCAIAALLEWLEPGHFPWRPLPEVRLVQAVESLRERAADPQAPALVRELARLAQLYLGQQSELEAARRIEQHVIALEQGLHAMEEGKRGHAASRRPGEPPPDALDDKLSRLQELIDNRSPHEARALADSLRSTILRPSVAHPLRRRGAAMIKQVYLQEGDKDALLAFTLDEVSSLEGALIQAAGGRPLVTG
>NZ_CP019038.1|WP_075792556.1|2145267_2146005_-|5'/3'-nucleotidase-SurE
MRILISNDDGYLAPGINALADALATVADIVVVAPDSNRSGASNSLSLDRPLSVSKAANGYYFVNGTPTDCVHIALTGMLDTRPDLVVSGINNGQNMGDDTLYSGTVAAATEAYLFGIPAIAFSQVHGGWAEIESAARVARDIVLRRFDMLESPFLLNVNIPNLPYEQMGPLTPTRLGRRHQSEPVVRAQDPRGREIFWIGAPGACRDAGEGTDFYATSKGCVSVTPLQVDLTHRDQLDLLRRGLG
>NZ_CP019038.1|WP_075792555.1|2144416_2145271_-|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MSEKRSQFPLPLSSVTGGSTRKPAAPAPVATPQTATQNARQNNQHRAGNPPNVPGTAKPAPLPPQQTVARSDLAATEAPRRAMAARTARQGVKDAQVLAALEIVPRHMFVEPGMLGQAYADISLPIGHNQTISQPYIVARMIELLKGSGQPLRRVLEIGTGCGYQAAVLSRVAQEVYSIERIKPLHELAKANLRPLRIANLRLQYGDGMLGLPQVAPFDGIILAAAGLEVPRALLEQMAIGARLVAPLGAQVQHLQRIIRIGKAEWTSETLEACHFVPLRPGTA
>NZ_CP019038.1|WP_075792554.1|2143486_2144383_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MKPTPRLALLTLSLGILSACSTETRVAPVIDRPTPTASSFRPRPQPAPAPVAEENKPDARGTYTVRRGDTLLRIALDHGQNYRDLVAWNNLADPDDIKVGQVLKVAQPERGGNAVVTTPITMPGAEKAPAVPKKTEPNGAKKPYSESNLAKEDNPKAERVISAGVTPGTTVTANDDEKLSWMWPSDGKIVATFDEGKNKGIDIAGKMGQQVMAAGSGKVMYAGSGIRGYGNLVIVKHSNSLLSAYAHNRTILVKEGQNVTKGQPIAEMGDSDADAVKLHFEIRQQGKPVDPAKFLPSR
>NZ_CP019038.1|WP_075792553.1|2142463_2143477_-|RNA-polymerase-sigma-factor-RpoS
MTLPPDPLDHDTPEDNPDEPLDDSEFGADGVDRAELLPEGAVVAVVDTVDELKSVLQAELSTDTTQHYLNRIGAKPLLNAEQESHYATLAKAGDFNARQKMIEHNLRLVVSIAKHYINRGVVLLDLIEEGNIGLMRAIDKFEPERGFRFSTYATWWIRQSIERAIMNQARTVRLPVHMVRELNQVLRAKYHLEAQHHDGKEASAEDIASLVGRPVEEVQDILALSEHATSLDAPLDNDPQSSLMDMLPDEGDVSPDAHAEQHEMTVLVRDWLQKLPDKQRLVVMRRFGLDNDDPATLETLAEEMGVTRERVRQIQQEALVKLKRAMAARGVVRDSLL
>NZ_CP019038.1|WP_075796317.1|2140884_2142270_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MQETFINIKSLDMDARGVGHLENEDGTPGKVIFVEGALPGERVSFETLRKKKNWESGRMVTLQKASSMRVEPKCPHFWHCGGCSMQHLEPSAQVAMKQRVLEDNLWHIGKTKAENIMRPMYGPTWDYRYRARLSVRHVAKKGTVLVGFHERHSSYVADMTSCEILPDHLSNMLVPLRELVGALSIYQQMPQIEIAVGEETTVLVLRIMAPLSPADETLVKAFADKWNIQWWLQPKGPDTAAPYYPLGKELYYTLPEFGIKMPFKPTDFTQVNHQINRLLVHKALTLLDVQKDDRVADLFCGLGNFTLPLATQAREVVGIEGSTALTTRALENARANGLAGKTTFYTRNLFEVTKDDLIALGKFDRMLVDPPRDGAVALAIALAELRLTNPDLMPKRIVYVSCSPSTLARDAGILTHRAGYVLKKAGVANMFPHTSHVESIGVFELLDEFQPREFSAPKDVE
>NZ_CP019038.1|WP_075792552.1|2138110_2140795_+|response-regulator
MEAATRDFHLLGSTGAVRAGYHVHDWSASPLGSPDRWSPALRNAVSLILESEFPMYLAWGPHLALLYNAAFIPLLDGTHPVSLGRPLAQVWPDRWPGLKPLVERALAGHATYGEDVPSPIDRNGKPYNAWFTLAYSPLRDDSGNVRGVLCVTSETTQRVQLERRHAVQLRVVDSLRRMHHPSDIIECSCTLLGRHLELERACYVETDEADGSFEVMHDWARDASAPLIGRRARLDDFGPQALALLRTGSPLAVRDATADPRLPERGDRYAAAGARAILVVPKVRRGQLVAALVGYSTLPRDWDEETQRLATDIAERSWEALDRVRAEQALRDAVARQTTLLDMNEFRLEVSDQLRHLNDPSQIFVQTGALLGRFLQASRVLYGDYDADKQLVTFHSNYTDGIVAELNGTFPAALFGTANFASLAQGTWVSSDLQRDPRTSGADVWPNYAALQIRSSVVVPLNRNGALTSCLFINDNLPRVWSADIVRLIEDVAERAWSAVERVRAEDALRLADRRKDEFLAMLAHELRNPLAPISAAAQLLNMGPPDGARVERTSAIIARQVAHMTGLIDDLLDVSRVTRGLVVLAREEVDLRRVIGDAVEQVRPLIEARRHQLALHLSTEPAIVQGDPKRLVQVVANLLNNAAKYTHEGGRLSIWMGITAEQVLVSVSDNGIGISAELLPTVFELFSQAERTPDRSQGGLGLGLALVKSLVELHGGMVTAASEGRNLGSEFTIRLPRLHGAGVPPCEKVVSTQAPGSTQGLSLMLVDDNVDAAMTLGLLLESGGHDVTVMHHPGEALEQAAQGRYDAFLLDIGLPGMSGYELARRLRKLPACADATLVAITGYGQQSDQASAAYAGFDSYFVKPVDPAGLFALLDRVAPGRVGGPPPTRSPAA
>NZ_CP019038.1|WP_075792551.1|2135761_2137765_+|TonB-dependent-receptor
MKIERTLLASALLLAFHPAVRAADDQQTINEGKIQQVVVTASPLRNGEGDQILTPAKVLAGDELRDKVGSSLGETLQNELGVSASAFGAGASRPIIRGMEGSRVKMLENGMATSDVSGLSNDHAVASEGAVARQIEILRGPAALLYGSGAIGGLVNVVNERIPTALEPKPTGQIETRLSTVDNGKNMSGTLDGAVGKIGLHLDGNMRNTDDYQIPDLRVVNDPASRMNRLPNSDTRERNIGVGGSYIDDWGYAGLSASHLTNFYGIPTNEGSHISQRQNRYDFDSIVKSPLDGFESARIKAGYTDYHHAELDNGVPATLFSNKSFESRIELTHKPLTSLGLHGTFGVQTENTHFSALSAEGGPDTVPVTHSTTQAAFLVEEWKQGPLRWNAGLRYEHVDRKPVSNKERSFDLQSGSIGALWPFTTGYSLGATLSYAQRAPSTDELYSGGPHDATLTFDIGDPDLHKEISRNLELSLQKTSGLLRWRVNAYRNNVNNFIFGHITGATFDADGNPGGDFRERLFQQAKAHIQGAEAEMTWNQVGMGWNGRVFADTSRGYLDDVGNLPLQPADRVGAAVGYRQPHWRASLDWTHARAQDRLAAFEATPTPSYNQVDANVSYTQKLEKMDLTYFLTAKNLLNEDIRLSTSLLKDIAPLPGRNITFGVRAKF
>NZ_CP019038.1|WP_075792550.1|2135334_2135673_+|hypothetical-protein
MSRSLVHVLLSLLLLVSQQLSLGHGYTHWADIDETLVQQAGADDGSGKLPKPGLHDLCGQCAASAQIAFALPTTLRRFVPAELAYAAPAVPETPGICLLAACPFQSRAPPQA
>NZ_CP019038.1|WP_179966285.1|2148490_2150509_-|ATP-dependent-DNA-helicase
MSGVDAGEPDAAPASAEPAGKYDAEVERIFGAGGPLAPAVGTFKPRESQTEMAKAIAHAIGTQGTLIAEAGTGTGKTFAYLVPALLWGGKTIISTGTKNLQDQLFSRDIPTVRGALRAPVSVALLKGRSNYLCHYHLERTLSNGRLTSRDDVGHLREISRFIKMSQSGDKAELTKVPETASVWNLVTSTRENCVGQECQYYQDCFVMKARREAQQADVVVVNHHLFFADVALKEGGMAELLPSANTIIFDEAHQLPEVATLFFGTTVSTGQVLELCRDVLAEGLAHARGGVDWAKVVTVVEKAARDLRLTFPEGGTRLSLPQIPPSSEFFPALDKLKEELEGMIDVLEAQAERAETIEQCRVRAIEILDQYKAWKSEPKKGKEIEGDDAVLWVEAFSSSLQLHKTPLSIAPIFAGQRAGTPRSWIFTSATLAVKNDFKHFTAQLGMTGEPAQSWPSPFNYQDQGILYVPTGLPEPNTFGYTDAVVDMALPVIEAAGGRCFFLCTTIRAVNRVAERLREEFAARGLDFPLFVQGERGRTELLDSFRNAGNAVLVGSQSFWEGVDVRGEALSLVIIDKLPFAPPDDPVLAARIEVMEKKGMNGFVHHTLPEAIINLKQGAGRLIRDVEDRGVLMLCDPRVISKPYGRRIWQSLPPFRRTRVQADVIEFFKSPKA
>NZ_CP019038.1|WP_075792560.1|2150562_2150763_-|DUF465-domain-containing-protein
MIDVQEIQRRIIELDVEHRDLDAVIEMLTRDGHSDQLQLRRLKKRKLQLKDHITLLKMQLVPDVPA
>NZ_CP019038.1|WP_075792561.1|2150940_2151711_+|protein-phosphatase-2C-domain-containing-protein
MTSYKLEAGTAQHIGNRPQQNDRVALMTGARAPGYALAVLSDGVAGAAGADQVLHTAKQVFDEFKPGDRPTALRLQQLLRDIVQETHLVINMNAVTTQVEAHASFVGLVLTPHGDAVWAHVGDSRLYHFRDGKCLSRTSDAAYVEHLVSSDRLPPEAAKNHRKSKLLVNLLGNSRKDPFITFGQRQDLAPGDTFLLCSDGLWHFFTDAELGAATAKASPRQASEMLINKAGERSQGKGGNCSMAIVKLVKPVLERP
>NZ_CP019038.1|WP_169926860.1|2151819_2152482_-|hypothetical-protein
MRALPAIAFAALLTACAGPDVVPREVPPPPVTSVAQADQQLAAVARERAAIEARFAERERVCYDKFFVNNCLDEAKERRRSALAAQRAIEVQADRFKRQAIVEERDRNLAEAERRFQEQEARLAAAPPKPTPEPTPTPPPRKPTVPGRVAERDARLRAERQEEAANADKRAQNVREFEKRKAESAERQRKVAERKAEKAAKAAKEAEDAKAKAAQDTTKK
>NZ_CP019038.1|WP_075796318.1|2152533_2153631_-|cell-division-protein-ZapE
MNVQEYYQHALTERGFKSDPAQQRAVDRLQEAYDDWVAYKSQRSSAFKRLINRPEVPQGVYMWGGVGRGKSFLMDSFYSVVPVVRKTRLHFHEFMRAVHRQLDELKGMEDPLLEVARRIAKKYRLICFDEFHVSDVADAMIMYNLLSALFSHGVSFVMTSNYDPDKLYPDGLHRDRMLPTIALLKDKLDVLNVDAGIDYRHRALEQVQAYYTPLGAAADHALRDTYSKIADTADEDPRVHIEQREIRALRRAGGVIWFDFATLCGGPRSQNDYLELASQFHTVILSGVPRMSAAMSSEARRFTWLIDVFYDHKVKLIMSAEVEPEQLYTEGAMSNEFHRTVSRIIEMQSREYMLAERRGAADALA
>NZ_CP019038.1|WP_075792563.1|2153783_2155217_-|dihydrolipoyl-dehydrogenase
MSNEKQFDVVVIGGGPGGYVAAIRAAQLGFKTACIDEWQNAKGGPALGGTCTNVGCIPSKALLQSSEHFEHAGHAFAEHGIDVAGLSLNLGQMLKRKEGVVKANNDGIVYLFKKNKVTFFHGRGTLAGKAGEGYAVNVSGPTTDSITAKNVIIATGSNARELPGAPFDEKVILSNTGALTVDAVPAKLGVIGAGVIGLEMGSVWRRLGAKVTVLEGLPTFLGAVDEQIAKEAHKLFTKQGLDIQLGVKINSVTKGDNNVTVEYADASGAAQSATFDRLIVSIGRVPNTNGLGIETVGVQLDERGFVAVDDECRTNVPGIWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPWVIYTSPEIAWVGKTEQQLKKEGVAYKAGTFPFMANGRARALGDTSGMVKFLADATTDEILGVHIVGPVASELISEAVVAMEFRASSEDIARICHAHPSLSEATKEAALAVDKRSLNF
>NZ_CP019038.1|WP_075792564.1|2155421_2155763_-|PspC-domain-containing-protein
MMIADEIKRLHELHQAGALTDAEFEQAKAKVLSSASSTVNLNKTASADGTFASELNTLRRSRTDRWLGGVCGGLARVSGVDAWVWRLVFTLFTITFGFGIVVYLLLWIFVPEE
>NZ_CP019038.1|WP_075792565.1|2155819_2157082_-|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MAQIEVKVPQLSESVAEATLLSWHKKVGEAVSRDENLIDIETDKVVLELPAPAAGVIVQVIKNDGATVVAGEVIAIIDTEASAGASTGQVSAAPAPAAEAAPAAAPAAGAATGSKGDVAMPAAAKILADNNLTALDATGTGRDGRVTKGDALAAVANKPAVAAPAPLAAAAPKAALPQVAAPVANLGERPEERVPMSRLRARIAERLLQSQSTNAILTTFNEVNMAPVMELRNKYKDKFEKEHGVKLGFMSFFVKAAVAALKKYPILNASVDGNDIIYHGYFDIGIAVGSPRGLVVPILRNADQMSIADIEKKIGEFGQKAKDGKLTLEDLTGGTFSISNGGVFGSMLSTPIINPPQSAILGVHATKDRAVVENGQIVIRPMNYLAMSYDHRIIDGREAVLGLVAMKDALEDPARLLLDL
>NZ_CP019038.1|WP_075792566.1|2157152_2160008_-|2-oxoglutarate-dehydrogenase-E1-component
MMQQYNANSYLFGGNAPYVEELYEAYLNNPGSVPDNWRAYFDAMQHMPAVDGTAKPDVDHSSVIASFAERAKQGPIRTVTASPDAELGRKRVAVTQLIAAYRYLGSRWANLDPLQRQERPPIPELEPSFYGFTEADLDTKFNISNTYFGQETASLRDLLNMLRDTYCRSIGAEFMYVSDPTEKRWLQEKLESIRSTPSFTAEKKKHILERLTAAEGLERYLHTKYVGAKRFSLEGGESFIASMDEVIRRAGEHGVQEVVIGMAHRGRLNVLVNTLGKAPSELFEEFEGKHADDLPAGDVKYHQGFSSDISTPGGPVHLSLAFNPSHLEIVNPVVEGSAKARMERRGDRLGKEVLPVLVHGDAAFAGQGVVMETLNLAQTRGYGTGGTVHLVINNQIGFTTSDPRDARSTLYCTDVVKMIEAPVLHVNADDPEAVVLATQIAMDYRTEFHKDVVVDIICYRKLGHNEQDTPALTQPLMYKKIAKHPGTRKMYADKLAAQGTIAPDGGDQLVAEYRAAMDAGKHTVDPVLTDFKNKYAVDWAPFLNKKWTDAADTAVPLTELKRLAQRITTVPENFKLHSLVEKVLGDRATMGRGEMNLDWGMGEHLAYASLLASGYAVRLSGQDAGRGTFVHRHAVLHDQNRERWDQGIYLPLANVSENQANFTVIDSVLSEEAVLGFEYGYSTAEPNTLTIWEAQFGDFVNGAQVVIDQFIASGEVKWGRASGLVMMLPHGYEGQGPEHSSARIERFLQLSADHNMQVVQPTTAAQIFHLLRRQMVRQFRKPLVIFTPKSLLRNKDAGSPLTDLAKGGFQTVIGELDDKIDANKVKRVIACSGKVYYDLVNARKTRGTTDTAIIRVEQLYPFPHKAFGAELKKFPNVTEVVWAQDEPQNQGPWFQIQHNVFESMETGQRLAYAGRPASASPAVGYTDKHVAQQKELLDTAFSKLKGFVLTK
>NZ_CP019038.1|WP_075792567.1|2160625_2162056_-|carboxylesterase-family-protein
MPRPPLQSLLMVALTFLVSSGAAQGASGPVATVDTGKVRGAVEKGVASWKGIPFAAPPVGDLRWRAPQPAAAWSGVREATAYGSDCMQLPFPSDAAPLGTPPSEDCLYVNVWRPAKARASGKLPVIVWIYGGGFVNGGSSPPTYAGAALAKQGVVLVSFNYRLGRFGFFAHPQLTQQAHGEALGNYGYMDQLAALQWVKRNVAAFGGDASNVTIMGESAGGMSVNALLTSPMAQGLFAKAVVLSGGDGTTADPGLASVEQVGVNFAAAKGIAADDPQALAKLRALPAEQVVDGMNLANRAPQNPSTYAGPFADGKVAVETGAAFASGRFAKVPVMIGATSADIGGKTGFMVAGARGLAGRLAAQGVPVYAYRFSYVADTIGKPGAQHASDIPYFFDTVDVKYGAAVTKKDVAMGRAMSAYLVNFAKKGDPNGRKLPAWPRYAGDEDVIMDFAASGRPVAQRDPWGPDIDATTVAGR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019038_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019038_2

5952176-5952254

Orphan

Consensus_repeat	Method
GCAGATCAAATTCGGGGTCGGAGCACG	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP019038_2

>merge|NZ_CP019038|2|5952176-5952254|CRISPRCasFinder
GCAGATCAAATTCGGGGTCGGAGCACGGTTTTACGGTCGTGCTTTGAGCCCGGCAGATCAAATTCGGGATCGGAGCACG

>NZ_CP019038|2|2|5952176-5952254|CRISPRCasFinder
GCAGATCAAATTCGGGGTCGGAGCACG	GTTTTACGGTCGTGCTTTGAGCCCG
GCAGATCAAATTCGGGATCGGAGCACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019038.1\|WP_075795380.1\|5950841_5952107_-\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|320702
NZ_CP019038.1\|WP_075795381.1\|5952311_5952890_+\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
NZ_CP019038.1\|WP_075795374.1\|5944476_5944926_-\|purine-binding-chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NZ_CP019038.1\|WP_156895763.1\|5958469_5958931_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP019038.1\|WP_075795385.1\|5960268_5960955_-\|UPF0149-family-protein	unknown	unknown	gnl\|CDD\|236680
NZ_CP019038.1\|WP_075795379.1\|5950512_5950845_-\|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl\|CDD\|376528
NZ_CP019038.1\|WP_075795375.1\|5944934_5946749_-\|CHASE3-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP019038.1\|WP_075795387.1\|5962168_5964784_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP019038.1\|WP_075795372.1\|5942615_5943296_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|366716
NZ_CP019038.1\|WP_075796622.1\|5946825_5947140_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|223799
NZ_CP019038.1\|WP_075795377.1\|5948584_5949517_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|234835
NZ_CP019038.1\|WP_075795376.1\|5947262_5948495_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP019038.1\|WP_075795382.1\|5952964_5955472_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP019038.1\|WP_075795383.1\|5956704_5958465_-\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|238233
NZ_CP019038.1\|WP_083685850.1\|5959062_5960178_+\|HPP-family-protein	unknown	unknown	gnl\|CDD\|225979
NZ_CP019038.1\|WP_075795378.1\|5949607_5950516_-\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234631
NZ_CP019038.1\|WP_075795386.1\|5961053_5962055_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|236974
NZ_CP019038.1\|WP_075795373.1\|5943292_5944480_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224271
NZ_CP019038.1\|WP_075796623.1\|5955658_5956600_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293806
NZ_CP019038.1\|WP_075795388.1\|5964951_5966454_-\|tryptophan-7-halogenase	unknown	unknown	gnl\|CDD\|368139

Protein	Function_ID	Function_description	E-value
NZ_CP019038.1\|WP_075795380.1\|5950841_5952107_-\|M48-family-metallopeptidase	gnl\|CDD\|320702	cd07343, M48A_Zmpste24p_like, Peptidase M48 subfamily A, a type 1 CaaX endopeptidase. This family contains peptidase family M48 subfamily A which includes a number of well-characterized genes such as those found in humans (ZMPSTE24, also known as farnesylated protein-converting enzyme 1 or FACE-1 or Hs Ste24), Taenia solium metacestode (TsSte24p), Arabidopsis (AtSte24) and yeast (Ste24p). Ste24p contains the zinc metalloprotease motif (HEXXH), likely exposed on the cytoplasmic side. It is thought to be intimately associated with the endoplasmic reticulum (ER), regardless of whether its genes possess the conventional signal motif (KKXX) in the C-terminal. Proteins in this family proteolytically remove the C-terminal three residues of farnesylated proteins. Ste24p is involved in the post-translational processing of prelamin A to mature lamin A, a major component of the nuclear envelope. ZmpSte24 deficiency causes an accumulation of prelamin A leading to lipodystrophy and other disease phenotypes, while mutations in this gene or in that encoding its substrate, prelamin A, result in a series of human inherited diseases known as laminopathies, the most severe of which are Hutchinson Gilford progeria syndrome (HGPS) and restrictive dermopathy (RD) which arise due to unsuccessful maturation of prelamin A. Two forms of mandibuloacral dysplasia, a condition that causes a variety of abnormalities involving bone development, skin pigmentation, and fat distribution, are caused by mutations in two different genes; mutations in the LMNA gene, which normally provides instructions for making lamin A and lamin C, cause mandibuloacral dysplasia with A-type lipodystrophy (MAD-A), and mutations in the ZMPSTE24 gene cause mandibuloacral dysplasia with B-type lipodystrophy (MAD-B). Within cells, these genes are involved in maintaining the structure of the nucleus and may play a role in many cellular processes. Certain HIV protease inhibitors have been shown to inhibit the enzymatic activity of ZMPSTE24, but not enzymes involved in prelamin A processing.	2.45534e-180
NZ_CP019038.1\|WP_075795381.1\|5952311_5952890_+\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	3.63863e-141
NZ_CP019038.1\|WP_075795374.1\|5944476_5944926_-\|purine-binding-chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	1.50621e-23
NZ_CP019038.1\|WP_156895763.1\|5958469_5958931_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	3.93397e-13
NZ_CP019038.1\|WP_075795385.1\|5960268_5960955_-\|UPF0149-family-protein	gnl\|CDD\|236680	PRK10396, PRK10396, hypothetical protein; Provisional.	2.43677e-43
NZ_CP019038.1\|WP_075795379.1\|5950512_5950845_-\|4a-hydroxytetrahydrobiopterin-dehydratase	gnl\|CDD\|376528	pfam01329, Pterin_4a, Pterin 4 alpha carbinolamine dehydratase. Pterin 4 alpha carbinolamine dehydratase is also known as DCoH (dimerization cofactor of hepatocyte nuclear factor 1-alpha).	1.45865e-32
NZ_CP019038.1\|WP_075795375.1\|5944934_5946749_-\|CHASE3-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.0889e-43
NZ_CP019038.1\|WP_075795387.1\|5962168_5964784_+\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	7.63662e-22
NZ_CP019038.1\|WP_075795372.1\|5942615_5943296_-\|chemotaxis-protein-CheW	gnl\|CDD\|366716	pfam01584, CheW, CheW-like domain. CheW proteins are part of the chemotaxis signaling mechanism in bacteria. CheW interacts with the methyl accepting chemotaxis proteins (MCPs) and relays signals to CheY, which affects flageller rotation. This family includes CheW and other related proteins that are involved in chemotaxis. The CheW-like regulatory domain in CheA binds to CheW, suggesting that these domains can interact with each other.	1.3904e-20
NZ_CP019038.1\|WP_075796622.1\|5946825_5947140_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	9.94497e-11
NZ_CP019038.1\|WP_075795377.1\|5948584_5949517_-\|ornithine-carbamoyltransferase	gnl\|CDD\|234835	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional.	0
NZ_CP019038.1\|WP_075795376.1\|5947262_5948495_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_CP019038.1\|WP_075795382.1\|5952964_5955472_+\|PAS-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	7.20796e-49
NZ_CP019038.1\|WP_075795383.1\|5956704_5958465_-\|chloride-channel-protein	gnl\|CDD\|238233	cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl- ions across cell membranes, thereby regulating electrical excitation in skeletal muscle and the flow of salt and water across epithelial barriers. This domain is found in the halogen ions (Cl-, Br- and I-) transport proteins of the ClC family. The ClC channels are found in all three kingdoms of life and perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, transepithelial transport in animals, and the extreme acid resistance response in eubacteria. They lack any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. Unlike cation-selective ion channels, which form oligomers containing a single pore along the axis of symmetry, the ClC channels form two-pore homodimers with one pore per subunit without axial symmetry. Although lacking the typical voltage-sensor found in cation channels, all studied ClC channels are gated (opened and closed) by transmembrane voltage. The gating is conferred by the permeating ion itself, acting as the gating charge. In addition, eukaryotic and some prokaryotic ClC channels have two additional C-terminal CBS (cystathionine beta synthase) domains of putative regulatory function.	5.74836e-90
NZ_CP019038.1\|WP_083685850.1\|5959062_5960178_+\|HPP-family-protein	gnl\|CDD\|225979	COG3448, COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms].	3.8678e-120
NZ_CP019038.1\|WP_075795378.1\|5949607_5950516_-\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	1.26654e-151
NZ_CP019038.1\|WP_075795386.1\|5961053_5962055_+\|serine/threonine-protein-kinase	gnl\|CDD\|236974	PRK11768, PRK11768, serine/threonine protein kinase.	0
NZ_CP019038.1\|WP_075795373.1\|5943292_5944480_-\|hypothetical-protein	gnl\|CDD\|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	3.64608e-48
NZ_CP019038.1\|WP_075796623.1\|5955658_5956600_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293806	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain. Pseudomonas pseudoalcaligenes OPHC2 is a thermostable organophosphorus hydrolase which a broad substrate activity spectrum: it hydrolyzes various phosphotriesters, esters, and a lactone. This subgroup also includes Pseudomonas oleovorans PoOPH which exhibits high lactonase and esterase activities, and latent PTE activity. However, double mutations His250Ile/Ile263Trp switch PoOPH into an efficient and thermostable PTE. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	8.07853e-117
NZ_CP019038.1\|WP_075795388.1\|5964951_5966454_-\|tryptophan-7-halogenase	gnl\|CDD\|368139	pfam04820, Trp_halogenase, Tryptophan halogenase. Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.	0

>NZ_CP019038.1|WP_075795380.1|5950841_5952107_-|M48-family-metallopeptidase
MLSSAFSVLFVVFLLLTLGLRYWLASRHIRHVQRHRAQVPAEFAEKIPLSAHQKAADYTVAKTRFGLWAALWNTLVLTGFTLLGGLQALSTALLHVTGPGMVHQILLIVAFAVVSGALDLPFSYYRQFVLEERFGFNKMTLKLWIADAVKGALVGAVIGLPLLWVVLTLMDKTGALWWLYAWLVWSGFQLLMMVLYPTVIAPLFNKFTPLTDEKLKDRIEGLMTRVGFAAKGLFVMDGSKRSAHGNAYFSGFGANKRIVFFDTLLSRLAPAEIEAVLAHELGHFKLKHIIKRIAVLFALSLAFLALLGWLKTQVWFYTGLGVLPLLGQSNDAMALLLFSLVLPVFTFPFSPLTSITSRKHEFEADAFAASHSDARDLVSALVKMYEDNASTLTPDPIHSAFYDSHPPASVRIRQLRLAGAA
>NZ_CP019038.1|WP_075795379.1|5950512_5950845_-|4a-hydroxytetrahydrobiopterin-dehydratase
MSLIDRHCVHDAPALDDAAIQSLLTEVPDWRVNGTRIERAFVFRDFHETMEFVNALAFMIHREDHHPDLAVGYRRCTASWTTHSAGNRLSANDFICAAKADALYAGRAGA
>NZ_CP019038.1|WP_075795378.1|5949607_5950516_-|ribosome-small-subunit-dependent-GTPase-A
MSKQNKNNELTGTIVAAHGRHYLADVDGEFLQCVTRGKKTNVAVGDIVHLKRTSNDQAVIEKIAERTTLLYRSDQYKSKLLASNITRLFIVIATEPSFADDLVSRALVACEAAGVDAHLILNKVDLEPNLTRARERASLYTNLGYPLHEVSAKTHPEETVATLTPLLRDQSSILIGQSGMGKSSLVNLLVPDADIAVREISEALDTGKHTTTFTRLYKLPGGGTLIDSPGFQEFGLYHLTEGMLERAFVEFKPYLGGCKYYNCRHLAEPQCAVLQAVADGKIAKLRHELYAQLLHESAQTLY
>NZ_CP019038.1|WP_075795377.1|5948584_5949517_-|ornithine-carbamoyltransferase
MAGTTPTNIKHFLQFSDFTRDEFEYLIERATVIKRKFKNYEIYHPLVDRTLVMVFEKNSTRTRLSFEAGMHQLGGAAIYLNTRDSQLGRGEPVEDAGQVMSRMCDIIMVRTFGQDIIERFAAHSRVPVINGLTNEHHPCQVLADIFTYYEHRGSIVGKTVAWIGDANNMLYSWLQAAEVFGFHLNVSTPKGYDIDPALVTTKNYTFFENPSDACAGAHLVNTDVWTSMGYEKENAERLKAFDGFIVDEAKMARASGDALFMHCLPAHRGEEVSAGVIDGPQSVVWDEAENRLHVQKALIEYLLLGRIEGK
>NZ_CP019038.1|WP_075795376.1|5947262_5948495_-|argininosuccinate-synthase
MSDIKKVVLAYSGGLDTSVILKWLQDNYKCEIVTFTADLGQGEELEPARAKALKFGIKPDNIYIDDVREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIANETGADAVSHGATGKGNDQVRFELGAYALKPDVKIIAPWREWDLLSREKLLKYAEDAGIEIDMKHKNGGAPYSMDANLLHISFEGRHLENPSAEAEESMWRWTVSPEAAPDQPEYLDIEFQHGDIVGLNGKQLTPAAVLTELNRLGGKHGIGRLDLVENRYVGMKSRGCYETPGGTIMLKAHRAIESITLDREVAHLKDDLMPRYASLIYNGYWWAPERVALQTLIDHTQKSVNGWVRVKLYKGNVIVVARDSKTDSLFDQTIATFDEDGGAYNQADAGGFIKLNALRMRIAANARKKRGQ
>NZ_CP019038.1|WP_075796622.1|5946825_5947140_-|YkgJ-family-cysteine-cluster-protein
MSDYSENPCLSCGACCMTYRVSFYWADGDARGLPPALTERVNAHLACMAGTNANMPRCAALQGEPGGRYACRVYEQRPEPCREVQIGDDKCRHARARHGLAALS
>NZ_CP019038.1|WP_075795375.1|5944934_5946749_-|CHASE3-domain-containing-protein
MFHNLTIRNKLIAGFGAIVAIILLLLILAYNNFARLSEANQWNRHTLEVLLEVDHISTSVLQVQSSTRGYLLTGNETLVAPIRNEYATARSHLKRAQALTVDNGQQQERLRRLDTLLSTWMDQAIMPQVEQRRGAAPAGTMTMSPKIEAVVLAGTSSVATMRDLLDDIEAEENRLLVQRQKDTDTLRQMMNSLLTAGGVVCVLLAALIATLLVRAISRPLDSLMRAAGELAGGAHGARAEVLSRDELGQVALEFNRMAQSIEDSQAKEMAATNTLRAKVDALLEVVSKAARGDLTGTIGIAGSDAIGRLGEGLSTMFDNLRSLLNNVQRAGIQVTTSATQIAASARQQEATGIEQAQTSVEVLSTTREISANTSQLLRTIEEAGEVADYTTAATAEAQNNLRRMDQSMQQMVAATDAISAKLATLSEKASNINGVLTTITKVADQTNILSLNAAIEAEKAGEAGRGFAVVASEIRRLADQTSVSTWDIEQMLKEMQSAVSASVMGMDKFTEDIRRSVDEARHVAEQLSSMTDQVAKLAPRFDLVLQGMQSQAVGASQITETMTQLSDASQQTVDSLKATSEAVYQLQYAATDLQQSVANFSVSQ
>NZ_CP019038.1|WP_075795374.1|5944476_5944926_-|purine-binding-chemotaxis-protein-CheW
MKAMVFHIGGERYALPLAAVLRVLPVARLKALPGAPHFVPGLLDLHGEALPVIDLSRLAGTPPDAVRYDTRILLVEVWAGGRRRRLGLKAERVLGVASIAGPLVDAGVASAPWLGQVAPGADGMLQLLDPDRLLAPDVESLLFGTGDPT
>NZ_CP019038.1|WP_075795373.1|5943292_5944480_-|hypothetical-protein
MNLTFRLRAATGLDLSVAAVERAVRERMRHAGPGIDYDPQPGTAEFDALVDLVVVPESWILRDPAVFDAALSFVQARLAAQPGRCVRVLSLPCAGGEEPYSLAMLLARAGVPPDACRIDAFDVSHAAIARACAGRYTRNAFRGDDRGLRVRFFTQDGDACVIDAVPRAYVAFEQANLFDVDPHRTGTYDLVICRNLLIYFDDATQARAATCLGALLADDGLLLAGHAEAPALCRHGFAPGGPRDTLALRKQGRGAAPVLRSAVRSTLPPVPAVPRPAAQVAVPARAPAPRDLLAEAKRHADAGRLAEAEQCCRAALALRADDAEAWFLLGLTAECAHRPQDAEHSWRRCVYLDPDHYEALCALALLLEQRGDASAGAGFRRRAARVHARRGSTTT
>NZ_CP019038.1|WP_075795372.1|5942615_5943296_-|chemotaxis-protein-CheW
MKQLPLPEWKDDACWRRIGVAGDRSCPELARHVHCRNCPVYAGAAQRNLQRPVDAAYREAWARELARPEPPPARTDAAAMVFRVGREWLAVQMALAAEVAPLAPVHRLPHRSRGALLGIVNVGGRLLPAVSLARLMDVDTDGAPPPSGRHAFTRLLVLALGGHRFALPVDEVHGVLRYAQDGVRPPAANVDHAPPPLVAGIVADDAIEAALLDTARLGAQLEALLR
>NZ_CP019038.1|WP_075795381.1|5952311_5952890_+|oligoribonuclease
MSQANPTEASAPRPNEFNLVWIDMEMTGLDPDNDRIIEVAAVVTDANLNVLAEGPVIAVHQSDATLDKMDAWNKGTHGRSGLIDRVKASTIDEAQAEEQLIAFLKQWVPANKSPMCGNSICQDRRFMARGMPKLEAFFHYRNLDVSTLKELCRRWKPELASGFKKAQKHTALADIIESIEELRYYREHFIKL
>NZ_CP019038.1|WP_075795382.1|5952964_5955472_+|PAS-domain-containing-protein
MADILRTTAGLGGESEVRRLLREHDWTTSPLGPPDGWPPELATAVSMAFSSAFPMFIAWGPDLRFLYNDAYIAILGDKHPAAFGAPFQQVWAEIWPELVPIVDRALSNKSAYFEDLPFTMERRGFREPTWFTFSYSPLHDGHGRVAGVYCTVIETTNRVQAERRAAFELTLADALRPPASGDDAIRKGCTLLGLELGMARVLYGEVDEGLGTLSVARDWSRPGVASVAGHTFSIEAFGPELGRAGRAGAILALADVRADPRSAARQGTYLALGIHACLAVPLRKGGHLHAFLVLGLDRPHPWTGAEEALARGTAERIRAAVDLARVQATLREERDRSRTIIDTIAEGFMLLDRDWTVLQMNPAGQRIAHLDPDDIIGRNHWDIWPEAIDSEAGRMYRRVMRDRVAGTAEYRQRLPDGVEIWCEVRAYPTADGGLVSFFRDITERRAAEDKLRAADRRKDEFLAMLAHELRNPLAPISAAADLLRIGRLDEARVRQSSAIIGRQVRHMTSLVDDLLDVSRVTRGLVKLARAPVAARTIVDEAIEQVRPMFEARRQHLAVHIADPDALVLGDKARLVQVLANLLNNAAKYTPEDRRIDVAATVDAAAVATARGRLHLTVRDEGIGMEPELTGQVFDLFTQAQRSVDRAQGGLGLGLALVKNLVELHGGTVACTSPGLGQGSTFEVALPLMEPAPRQSSSGDYAGTGGVVAGGRRPLRVLVVDDNVDAAATLGMLLEACGYLVDVEHDSHRALERARHQRPDVALLDIGLPDMDGNELARRLRADAQTGAIVLVAVTGYGQEQDRRAAFEAGFDHHLVKPVDMDELAGLLAGIEAQRD
>NZ_CP019038.1|WP_075796623.1|5955658_5956600_-|MBL-fold-metallo-hydrolase
MIKHTLLAAALAAAAFTAQAAAPMVKTPAPGFYRVMVGDIEITPISDGTFDLPMDQYMHQKPELTRAAIAKNFLKLPVETSDNAFLINTGSKLVLVDTGAGVLMGPTVGKFVSNLKAAGYQPEQIDEIYITHMHGDHVGGLVNNGKRVFPNAIVRAGKADADFWLSQANMDKAPADKKDFFKGAMASINPYVEAGKFKPIDADGELVPGVSAIAEHGHTPGHTVYAVESHGQKLVLIGDLIHLAAVQFDNPQVTIAFDNDEKAAYAARKKVFDDAAKNGWMIGGAHLQFPGLGHLANQGKGYRWVPVNYTQMR
>NZ_CP019038.1|WP_075795383.1|5956704_5958465_-|chloride-channel-protein
MKPAPHPSTPRRDFSGDVRLLRIVALAALIGGLSTVAARVLLTMIRFFTDLFFYGKFSFSELSPADNTLGAWVIVIPVIGGLIIGLIARYGTEAIRGHGIPEAIEAILFKRSAMSPKVAVLKPLSSGIAIGSGGPFGAEGPIIMTGGAIGSLIAQHFHLTGGERKSLLVAGAVSGMTAVFGTPVAAVLMAVELLLFELRPRSLLPVATACAVAGFLRPLAIGAGALFPLQTAPVSPIALGSCLVAGIACGALAWLMSTALYRVEDAFHRLPFHWMWWPALGGLAVGIGGYFQPRALGVGYDVIGDLLHNHMVASAIVALLAVKLVIWLIALGSGTSGGVLAPLLMLGAGLGAVLGPYLPGADPALWPLVFMAATLGGMMRAPVMAVVFAFELTHDANSLLPLLAASAGAYGFTVLTMGRSILTEKIARRGHHIYREYGIDPLERHSVAEVMSTNVVHIDADATIGDVLATHFGPDQKHRGFPVTRGGLIVGMVERGTLNGHAPATRVGALFGANPPLVALPGETCRAVATRLAVHGIERLPVVAQSGNAQLLGVVSRSDLIKATATLHDEEHERRTLRTLPLVRRN
>NZ_CP019038.1|WP_156895763.1|5958469_5958931_-|MarR-family-transcriptional-regulator
MIYYLVPKANALESYQPVKDDTPPLSKTDFAALSEFRYQMRRYERFSENAVQAEGITPLQYLLLLHIKGFSGREWATVGELAERLQAKQHGVVALVTRCEAGELVARRTNAEDRRRVEVHLLPKGEALLTRLAAVHRAELRALQGVFTVPNLV
>NZ_CP019038.1|WP_083685850.1|5959062_5960178_+|HPP-family-protein
MRAVAGALVGLFVTAILSDMLTKGSGIVPLTLVAPMGASAVLLFCVPASPLAQPWSVIGGNTISALVGIICAKAVDNPALAAPLAGACAIFVMFVLRCLHPPSGAVALTAVLGGPAIHAVGFKFAFLPVCLNSTLIVLAALVFNNLTGRRYPHNQKSILRTAQKEAHATGDQPPMARLGFTAEDLDAVLARYGQVLDVSRDDLEEILLQTEQRAYARRFGTVNCGAIMSKDVVTATPDMPLAEAWRLLRHHNLHALPVLDASHRVAGIIGQGDFLHHAGLDDYQTVGERLRGLFAHVLGVRPDRAATVGELMSTKVAVVEANEPIATLVPLMSNVGFHHIPVVDERAVFLGVVSQSDLLAALFESRLAEAA
>NZ_CP019038.1|WP_075795385.1|5960268_5960955_-|UPF0149-family-protein
MQLDQPLSEKEFDDLDNFLLSDRCSDDAMTMDTLHGYLTAIAIGPETIMPAEWLPHVWGEAGAVPKWKNPKEEERIVNLIMRFMNEVLVTFEVAPKEFEPLYVEHEIDGETLIDAEAWCWGFWEGMELRPGSWNEIWESEAAPLMRPIYLLGADEIEESELAEVENPKLAHKLALEIEANLPGIHRFWLPRRKAAVETVRRDEPKVGRNDDCPCGSGKKYKKCCGAND
>NZ_CP019038.1|WP_075795386.1|5961053_5962055_+|serine/threonine-protein-kinase
MHNPDIPDSHPFSRLDPLMVLDAVDSVGLRGDGRLLALNSYENRVYRVGREEGQPVVVKFYRPGRWSDAAILEEHAFVQELADQEVPVVPADVLDGRTLHEHDGFRFAVFPSRGGRAPELSDPSTLEWIGRFIGRIHAVGASATYAERPRLDLDTFGREPRAWLIGHGFIPPELLTAYTSVLDQALDGVARCYDRAGALPLLRLHGDCHVGNVLWTADGPHFVDFDDSRMGPAVQDLWMLLSGERQEMVRQLGDVLAGYEDFCEFDPRQLYLVEALRTLRLIHYSAWLAMRWDDPAFPAAFPWFNTQRYWQDRILELREQVALMDEPPLWPVI
>NZ_CP019038.1|WP_075795387.1|5962168_5964784_+|hypothetical-protein
MTDADRNDPSAQKDDADFTIDLMPAAQDHAAPQVEPQREHLEQRAIKEGIARVEAEAKAAVAAENRAHAEARARSLAEERAAIDAEAAAAALANAQASEEAIEANRDRIETLRAAAKAAAERLEAVRQETAGLRARVESDTQIRLAAEARARAEEDARKRAAEQARIDTEIAARAQRDAEDLAIHAEQARLQAAERVAAVHAAREEVHHSASADARVAILARERERAERAARQTAEKLAQAEAEALELAQQRERADQVALASAFARAAAEARALEEARALAHIEQEREAIALAQVESERTAAQSLRMRLQTEKELRDAAIHRERQEQMSFEAAAARREAEARILAATQARIEADRKLRDVAMARAAAEEEEAQQSEARLHAEREAAEQARLRAEADRAAVVAAQRDLDAQQRERQLAEERAALSEAAAAARSAQNAALEAEVAAQAEQTEREREAARLAGQRAAQARELAEAEQARVQAEQDALARQQARIEAERALAAAAEARAAAEQEQAAQLAERVETLQREIAALQAETAARLAAAEQEHAVRLQAQRDMLTAQQAEIDARLATAEQEHAARLQAQRELLSAQQAEIDARRAAAEQEHAALLAAQAESEQRIAAERQAAIDAQRAITEHAARQAAHEQAIADAQRVQAARAAELAQAQADRAAHERRQQQLTEELLAAERAAADAAHDALLLLEQKLTSQQQQTAADVRANDAAAARMASERAAVAAAEARAAAEAERAQLAKMREAAEQAAAQAALDKRDAQRALLANAQLAAEMQRKTALATQEMMEAKKRLVELESARQEEQVAELAALREQIEARQAEAKQRAESEDLAREVLGRFSQQPSKVQAAMRLADAVAKQRADRDHE
>NZ_CP019038.1|WP_075795388.1|5964951_5966454_-|tryptophan-7-halogenase
MQHNAIRTIVIVGGGTAGWMAAAPLAQRLGKRCEIVLVESPEIGTIGVGEATLPTIRFYNNALQLDNADFMKKTQATFKLGIDFQDWGHLGNRFFHGFGDFGPPINGLSPHHHWLHLARAFDKMPALENWSVASRMACENKFTMPANTQPGVTDAFSFGFQFDAGLYAAYLRDYATARGATRIEGMIVGVDQHPETGFVTGLRLRDGRTVEGDLFIDCSGFRGLLIEDTLKAGYEDWSEHLPCNSALAVPCARVEPVTPYTRSTAKGSGWLWRIPLQHRTGNGHVYSNAFTTDEQARRDLLDGLDGAALDEPRQLRFVTGRRKKSWVKNVVAVGLSAGFVEPLESTSISLIETAVGKLIELWPDRDFRPELAAEFNRVMGSRYESVRDFIILHYKLTKRDDTPFWRYCANMKIPDSLAHQIELFRTTGRITILDRDGFAEPSFIAMLMGLGVVPERYDPFADDVDMRQLHGHFAGLRDLIAQTVAKMPGHRAYLERNAKA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

21554 : 33292

uncultured_Caudovirales_phage(55.56%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075791042.1\|21554_22868_+	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	5.0e-42	33.3
WP_075791043.1\|22877_23216_+	DUF190 domain-containing protein	NA	NA	NA	NA
WP_075791044.1\|23229_23616_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	9.3e-29	58.5
WP_075791045.1\|23627_23945_+	DUF190 domain-containing protein	NA	NA	NA	NA
WP_075791046.1\|23955_24387_+	EamA family transporter	NA	NA	NA	NA
WP_075791047.1\|24420_24795_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_075796160.1\|24884_25214_-	YnfA family protein	A0A218MNG8	uncultured_virus	1.2e-24	54.5
WP_075791048.1\|25319_25742_-	EamA family transporter	NA	NA	NA	NA
WP_075791049.1\|25860_26577_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	5.1e-89	68.7
WP_075791050.1\|26573_26996_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-49	67.4
WP_075791051.1\|27009_28290_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	5.0e-180	76.3
WP_075791052.1\|28376_28856_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	8.5e-40	53.2
WP_075791053.1\|28941_29286_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075791054.1\|29558_30575_+	phosphate ABC transporter substrate-binding protein PstS	M4SNR3	Cyanophage	5.1e-50	39.0
WP_075791055.1\|30631_31618_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_075791056.1\|31614_32475_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_075791057.1\|32467_33292_+	phosphate ABC transporter ATP-binding protein PstB	W8CYL7	Bacillus_phage	3.9e-16	32.1

DBSCAN-SWA_2

57231 : 127443

uncultured_Caudovirales_phage(30.0%)

transposase,integrase

attL 83555:83572|attR 133628:133645

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_083684450.1\|57231_58248_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_075791078.1\|58394_58991_-	c-type cytochrome	NA	NA	NA	NA
WP_051306791.1\|59044_60298_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_075791079.1\|60363_61758_-	beta-propeller fold lactonase family protein	NA	NA	NA	NA
WP_051306793.1\|61761_62205_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.0e-07	44.8
WP_075791080.1\|62210_63008_-	anti-sigma factor	NA	NA	NA	NA
WP_075791081.1\|63004_63511_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_075791082.1\|63539_63968_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_036216428.1\|64049_64973_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_075791083.1\|65079_66096_+	putative sulfate exporter family transporter	NA	NA	NA	NA
WP_075791084.1\|66771_68052_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	1.6e-178	76.1
WP_075791085.1\|68126_68606_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.9e-39	51.9
WP_075796165.1\|68642_68987_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075796166.1\|69048_69561_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.6e-23	40.6
WP_075791086.1\|69794_71198_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_075791087.1\|71249_72464_+	MFS transporter	NA	NA	NA	NA
WP_075791088.1\|72500_72818_+	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_169926782.1\|73513_74638_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_156895508.1\|74841_75378_-	hypothetical protein	NA	NA	NA	NA
WP_156895509.1\|75370_77764_-	hypothetical protein	NA	NA	NA	NA
WP_156895510.1\|77856_79551_-	hypothetical protein	NA	NA	NA	NA
WP_156895511.1\|79811_80885_-	hypothetical protein	NA	NA	NA	NA
WP_075791091.1\|81027_81864_-	thymidylate synthase	E5DV96	Deep-sea_thermophilic_phage	8.8e-109	65.8
WP_075791092.1\|82640_83735_-	threonine aldolase	NA	NA	NA	NA
83555:83572	attL	NA	NA	NA	NA
WP_075791093.1\|83887_85900_-	Cache 3/Cache 2 fusion domain-containing protein	NA	NA	NA	NA
WP_075791094.1\|86053_87883_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	6.1e-62	31.6
WP_075791095.1\|87924_88992_-	carotenoid 1,2-hydratase	NA	NA	NA	NA
WP_075791096.1\|88991_91541_-	ABC transporter permease	NA	NA	NA	NA
WP_075791097.1\|91528_91963_-	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_075791098.1\|91976_93386_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_075791099.1\|93378_93777_-	DUF2069 domain-containing protein	NA	NA	NA	NA
WP_075791100.1\|93780_94392_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA
WP_075796167.1\|94493_95840_+	YihY family inner membrane protein	NA	NA	NA	NA
WP_075791101.1\|95829_96138_-	DUF962 domain-containing protein	NA	NA	NA	NA
WP_075791102.1\|96177_96987_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_075791103.1\|96988_98125_-	PLP-dependent transferase	NA	NA	NA	NA
WP_075791104.1\|98315_98771_+	CBS domain-containing protein	NA	NA	NA	NA
WP_075791105.1\|98778_101019_-	EAL domain-containing protein	NA	NA	NA	NA
WP_075791106.1\|101195_102290_+	chorismate synthase	A0A291AU41	Pandoravirus	2.8e-86	46.4
WP_083685630.1\|102440_103847_-	HDOD domain-containing protein	NA	NA	NA	NA
WP_075796168.1\|103930_105592_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_075791108.1\|106002_107709_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
WP_075791109.1\|107831_108482_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_075791110.1\|108478_108853_+	Hpt domain-containing protein	NA	NA	NA	NA
WP_036231758.1\|109147_109351_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	77.6
WP_075791111.1\|109434_110349_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_075791112.1\|110520_112110_+	malate synthase A	NA	NA	NA	NA
WP_075791113.1\|112277_113075_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_075791114.1\|113098_113884_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_075791115.1\|113909_114350_+	ribonuclease HI	J9Q745	Salmonella_phage	5.2e-36	50.0
WP_075791116.1\|115098_116877_+	hypothetical protein	NA	NA	NA	NA
WP_169926783.1\|117216_118089_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_075791118.1\|118666_119653_-	hypothetical protein	NA	NA	NA	NA
WP_156895495.1\|119912_121134_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.9e-129	80.6
WP_156895512.1\|121190_121628_+	hypothetical protein	NA	NA	NA	NA
WP_156895513.1\|122035_122185_-	hypothetical protein	NA	NA	NA	NA
WP_075791119.1\|122529_122940_-	hypothetical protein	NA	NA	NA	NA
WP_075791120.1\|122932_125008_-\|integrase	integrase	NA	NA	NA	NA
WP_156895514.1\|125009_126659_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_169926784.1\|126720_127443_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
133628:133645	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1159591 : 1191349

Acidithiobacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075791334.1\|1159591_1161121_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	3.3e-130	49.6
WP_075791880.1\|1161210_1161963_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	8.6e-71	57.7
WP_083684740.1\|1161981_1163148_+	MFS transporter	NA	NA	NA	NA
WP_075791882.1\|1163925_1165290_+	porin	NA	NA	NA	NA
WP_075791884.1\|1166212_1166494_-	hypothetical protein	NA	NA	NA	NA
WP_075791886.1\|1167481_1168915_+	sugar porter family MFS transporter	NA	NA	NA	NA
WP_075791887.1\|1169387_1170338_-	PHB depolymerase family esterase	NA	NA	NA	NA
WP_075791888.1\|1170443_1170749_+	hypothetical protein	NA	NA	NA	NA
WP_169926779.1\|1170992_1171340_-	hypothetical protein	NA	NA	NA	NA
WP_075791890.1\|1171676_1171958_-\|transposase	transposase	NA	NA	NA	NA
WP_075791891.1\|1172566_1173562_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_075791892.1\|1173591_1174590_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_075791893.1\|1174614_1175724_-	porin	NA	NA	NA	NA
WP_156895568.1\|1175834_1177715_+	hypothetical protein	NA	NA	NA	NA
WP_075791895.1\|1177711_1178308_+	response regulator transcription factor	NA	NA	NA	NA
WP_156895569.1\|1178961_1180111_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.1e-64	47.9
WP_075791898.1\|1180436_1180733_-	hypothetical protein	NA	NA	NA	NA
WP_156895493.1\|1181260_1182459_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	5.6e-141	90.1
WP_156895539.1\|1182871_1183967_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-38	38.2
WP_156895570.1\|1184354_1184696_-	hypothetical protein	NA	NA	NA	NA
WP_083684746.1\|1184927_1186646_+	DUF1800 domain-containing protein	NA	NA	NA	NA
WP_075791899.1\|1186657_1188043_+	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_075796250.1\|1188257_1189253_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_075791900.1\|1189360_1189777_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_075791135.1\|1190098_1191349_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.2e-48	46.5

DBSCAN-SWA_4

1282695 : 1287022

uncultured_Caudovirales_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052233875.1\|1282695_1283208_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	3.5e-23	40.0
WP_075796259.1\|1283269_1283614_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075791958.1\|1283650_1284130_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.1e-39	51.9
WP_052233741.1\|1284204_1285485_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	7.3e-179	76.3
WP_179966256.1\|1285498_1285933_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.0e-47	67.2
WP_052233740.1\|1285929_1286646_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.6e-90	71.0
WP_052233873.1\|1286695_1287022_-	YnfA family protein	A0A218MNG8	uncultured_virus	1.8e-25	59.6

DBSCAN-SWA_5

3038920 : 3047235

Bacillus_virus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075793209.1\|3038920_3040723_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.3e-69	38.0
WP_075793210.1\|3040872_3041322_-	GatB/YqeY domain-containing protein	G3MAQ0	Bacillus_virus	2.7e-11	31.8
WP_005665410.1\|3041451_3041664_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_075793211.1\|3041770_3042982_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_075793212.1\|3043038_3044019_-	DNA-binding protein YbiB	A0A2H4JBY5	uncultured_Caudovirales_phage	7.3e-22	28.5
WP_075796389.1\|3044131_3045190_+	3-deoxy-7-phosphoheptulonate synthase	S4W5F1	Pandoravirus	8.3e-80	46.8
WP_075793213.1\|3045372_3046410_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	9.0e-95	53.7
WP_075793214.1\|3046428_3047235_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-28	39.7

DBSCAN-SWA_6

4234772 : 4286269

Burkholderia_virus(10.0%)

holin,transposase,protease,integrase

attL 4226711:4226726|attR 4260016:4260031

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4226711:4226726	attL	NA	NA	NA	NA
WP_156895493.1\|4234772_4235971_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	5.6e-141	90.1
WP_156895700.1\|4236495_4236981_-	hypothetical protein	NA	NA	NA	NA
WP_169926834.1\|4236977_4237610_-	hypothetical protein	NA	NA	NA	NA
WP_156895702.1\|4237711_4238878_-	hypothetical protein	NA	NA	NA	NA
WP_156895703.1\|4238874_4240356_-	hypothetical protein	NA	NA	NA	NA
WP_075794108.1\|4240352_4241456_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_075794109.1\|4241977_4242448_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	4.3e-20	45.8
WP_036231132.1\|4242537_4243149_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_075794110.1\|4243239_4244001_-	cytochrome c1	NA	NA	NA	NA
WP_075794111.1\|4244053_4245469_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_179966291.1\|4246354_4246789_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_075794113.1\|4246805_4247957_+	Do family serine endopeptidase	A0A1B1IT49	uncultured_Mediterranean_phage	7.6e-18	33.0
WP_075794114.1\|4247972_4248659_+	DUF2461 domain-containing protein	NA	NA	NA	NA
WP_075794115.1\|4248671_4249043_+	cupin domain-containing protein	NA	NA	NA	NA
WP_075794116.1\|4249051_4250104_-	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_075794117.1\|4250115_4250571_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_036231111.1\|4250702_4251176_-	protein-export chaperone SecB	NA	NA	NA	NA
WP_075794118.1\|4251311_4251581_-	glutaredoxin 3	V9QKN6	Rhizobium_phage	3.9e-10	44.0
WP_075794119.1\|4251598_4252003_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_075794120.1\|4252091_4252838_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_156895872.1\|4252904_4254317_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_075794121.1\|4254345_4255842_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	8.9e-19	25.4
WP_075794122.1\|4255838_4256594_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA
WP_075794123.1\|4256760_4257216_+	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_075794124.1\|4257229_4257730_+	type II secretion system minor pseudopilin GspH	NA	NA	NA	NA
WP_075796486.1\|4257740_4258130_+	type II secretion system minor pseudopilin GspI	NA	NA	NA	NA
WP_075794125.1\|4258126_4258810_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_075794126.1\|4258806_4259784_+	type II secretion system minor pseudopilin GspK	NA	NA	NA	NA
WP_075794127.1\|4259863_4261075_+	general secretion pathway protein GspL	NA	NA	NA	NA
4260016:4260031	attR	NA	NA	NA	NA
WP_075794128.1\|4261071_4261590_+	type II secretion system protein M	NA	NA	NA	NA
WP_075794129.1\|4261586_4262360_+	type II secretion system protein N	NA	NA	NA	NA
WP_075794130.1\|4262359_4264720_+	type II secretion system secretin GspD	A7BJX1	Enterobacteria_phage	1.1e-26	29.6
WP_075794131.1\|4264726_4266151_+	type II secretion system ATPase GspE	NA	NA	NA	NA
WP_075794132.1\|4266154_4267375_+	type II secretion system inner membrane protein GspF	NA	NA	NA	NA
WP_075794133.1\|4267386_4268133_+	hypothetical protein	NA	NA	NA	NA
WP_075794134.1\|4268146_4268878_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075794136.1\|4269121_4269502_+	cupin domain-containing protein	NA	NA	NA	NA
WP_075794137.1\|4269522_4269720_-	hypothetical protein	NA	NA	NA	NA
WP_075794138.1\|4269747_4271082_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	6.0e-43	29.1
WP_075794139.1\|4271119_4271656_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_075794140.1\|4271763_4273089_-	hypothetical protein	NA	NA	NA	NA
WP_036231049.1\|4273317_4273770_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA
WP_075794141.1\|4273959_4275003_-	GTP-binding protein	NA	NA	NA	NA
WP_075794142.1\|4275126_4276074_-	tyrosine recombinase XerC	G1JX48	Mycobacterium_phage	1.9e-11	28.3
WP_075794143.1\|4276075_4276741_-	DUF484 family protein	NA	NA	NA	NA
WP_075794144.1\|4276927_4278004_-	porin	NA	NA	NA	NA
WP_075794145.1\|4278471_4280055_+	sel1 repeat family protein	NA	NA	NA	NA
WP_075794146.1\|4280207_4281071_-	diaminopimelate epimerase	NA	NA	NA	NA
WP_075794147.1\|4281081_4281945_-	lipid A biosynthesis acyltransferase	NA	NA	NA	NA
WP_075794148.1\|4281941_4282793_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_075794149.1\|4282973_4284143_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.1e-117	59.5
WP_179966236.1\|4284398_4285817_+	adenosylhomocysteinase	S4VPF6	Pandoravirus	2.9e-43	30.0
WP_075794151.1\|4285915_4286269_+\|holin	phage holin family protein	NA	NA	NA	NA

DBSCAN-SWA_7

4884227 : 4896360

Dickeya_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075794571.1\|4884227_4888004_-	methionine synthase	A0A140XBC7	Dickeya_phage	2.5e-09	50.8
WP_075794572.1\|4888330_4888570_+	BrnA antitoxin family protein	NA	NA	NA	NA
WP_075794573.1\|4888768_4889716_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	9.0e-09	41.7
WP_075794574.1\|4889727_4890255_-	peptide deformylase	E3SLL2	Synechococcus_phage	1.8e-19	41.1
WP_075794575.1\|4890507_4891623_+	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	3.5e-12	39.1
WP_075794576.1\|4891630_4892812_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	3.0e-30	40.1
WP_075794577.1\|4892934_4893399_+	DUF494 domain-containing protein	NA	NA	NA	NA
WP_075794578.1\|4893678_4896360_+	DNA topoisomerase III	A0A2P1ELA0	Moumouvirus	9.7e-24	25.7

DBSCAN-SWA_8

5707568 : 5738142

Acidithiobacillus_phage(30.77%)

plate,capsid,terminase,head,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_169926844.1\|5707568_5708192_-	DUF2313 domain-containing protein	Q8W614	Enterobacteria_phage	1.7e-24	35.4
WP_075795190.1\|5708182_5709244_-\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	1.0e-40	36.6
WP_083685471.1\|5709236_5709704_-	phage GP46 family protein	Q8HAB8	Salmonella_phage	9.2e-31	56.1
WP_075795191.1\|5709718_5710357_-\|plate	phage baseplate assembly protein	Q8SBG6	Shigella_phage	4.8e-30	41.2
WP_075795192.1\|5710367_5711663_-	hypothetical protein	B5TK72	Pseudomonas_phage	2.8e-69	39.0
WP_075795193.1\|5711664_5712927_-	DNA circularization N-terminal domain-containing protein	Q8W619	Enterobacteria_phage	7.5e-43	33.4
WP_075795194.1\|5712942_5714751_-\|tail	phage tail tape measure protein	A0A0U2BXT9	Paracoccus_phage	7.0e-10	24.4
WP_075795195.1\|5714828_5715209_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_042549277.1\|5715205_5715574_-\|tail	phage tail tube protein	Q8W622	Enterobacteria_phage	2.0e-20	42.5
WP_075795196.1\|5715587_5717156_-\|tail	phage tail sheath subtilisin-like domain-containing protein	B5TK67	Pseudomonas_phage	2.3e-126	48.5
WP_075795197.1\|5717152_5717443_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_075795198.1\|5717526_5718210_-	hypothetical protein	Q8SBH4	Shigella_phage	1.6e-23	36.6
WP_156895755.1\|5718209_5718647_-	hypothetical protein	NA	NA	NA	NA
WP_075795200.1\|5718655_5719045_-\|head,tail	head-tail adaptor protein	U5P0R0	Shigella_phage	5.7e-10	34.1
WP_075795201.1\|5719041_5719683_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_075795202.1\|5719682_5720252_-	hypothetical protein	NA	NA	NA	NA
WP_075795203.1\|5720291_5720747_-	hypothetical protein	NA	NA	NA	NA
WP_075795204.1\|5720777_5722163_-\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_075796602.1\|5722287_5723211_-	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	2.2e-28	33.2
WP_075795205.1\|5723200_5724493_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	1.9e-78	41.5
WP_075795206.1\|5724492_5726205_-\|terminase	terminase large subunit	A0A141GEV8	Brucella_phage	4.9e-154	53.0
WP_075795207.1\|5726213_5726675_-\|terminase	phage terminase small subunit P27 family	Q8W632	Enterobacteria_phage	5.3e-07	28.7
WP_075795208.1\|5726795_5727194_-	HNH endonuclease	Q8W6N0	Burkholderia_virus	1.9e-32	54.8
WP_075795209.1\|5727302_5727500_+	hypothetical protein	NA	NA	NA	NA
WP_075795210.1\|5727516_5727990_+	DUF3489 domain-containing protein	A0A2H4JE21	uncultured_Caudovirales_phage	2.0e-25	81.7
WP_156895756.1\|5727971_5729234_-	ParB N-terminal domain-containing protein	K4HZA5	Acidithiobacillus_phage	2.0e-160	68.2
WP_075795212.1\|5729426_5729807_-	RNA polymerase subunit sigma	NA	NA	NA	NA
WP_075795213.1\|5729799_5730012_-	hypothetical protein	NA	NA	NA	NA
WP_179966300.1\|5730013_5730526_-	hypothetical protein	K4ICN3	Acidithiobacillus_phage	2.7e-60	74.0
WP_083685844.1\|5730798_5733015_-	AAA family ATPase	A0A1B2LRQ1	Wolbachia_phage	2.1e-104	32.8
WP_075795214.1\|5732984_5733740_-	hypothetical protein	K4HZA0	Acidithiobacillus_phage	1.2e-80	59.4
WP_075795215.1\|5733739_5734162_-	hypothetical protein	K4I3X7	Acidithiobacillus_phage	6.1e-26	47.2
WP_075795216.1\|5734158_5735832_-	DEAD/DEAH box helicase	A0A0A1CM43	Vibrio_phage	5.3e-36	28.4
WP_075795217.1\|5735847_5736453_-	hypothetical protein	K4ICM8	Acidithiobacillus_phage	4.1e-63	60.6
WP_075795218.1\|5736455_5737355_-	ATP-binding protein	K4HZX9	Acidithiobacillus_phage	7.0e-104	67.7
WP_075795219.1\|5737351_5737666_-	hypothetical protein	NA	NA	NA	NA
WP_075795220.1\|5737671_5738142_-	hypothetical protein	K4HZ96	Acidithiobacillus_phage	1.3e-29	44.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP019037

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

313053 : 353526

Burkholderia_virus(37.5%)

integrase,transposase

attL 314539:314598|attR 327348:328668

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075790888.1\|313053_313713_+\|integrase	tyrosine-type recombinase/integrase	K4K327	Caulobacter_virus	1.5e-07	27.8
WP_075790889.1\|313712_313931_+	hypothetical protein	NA	NA	NA	NA
WP_075790890.1\|314015_314444_+	hypothetical protein	NA	NA	NA	NA
314539:314598	attL	NA	NA	NA	NA
WP_156895493.1\|314589_315787_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	5.6e-141	90.1
WP_075790892.1\|316045_317299_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_075790893.1\|317295_318066_-	hypothetical protein	NA	NA	NA	NA
WP_075790894.1\|319410_320940_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	5.3e-128	48.9
WP_075790895.1\|321031_321784_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	3.5e-72	58.9
WP_075790896.1\|323196_323499_-	Dabb family protein	NA	NA	NA	NA
WP_075790897.1\|323495_325181_-	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-17	26.0
WP_083684389.1\|325346_326087_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_156895493.1\|326157_327356_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	5.6e-141	90.1
WP_075790899.1\|327403_327631_-	hypothetical protein	NA	NA	NA	NA
WP_075790900.1\|327633_328503_-	intradiol ring-cleavage dioxygenase	NA	NA	NA	NA
WP_083684392.1\|328502_329633_-	maleylacetate reductase	NA	NA	NA	NA
327348:328668	attR	NA	NA	NA	NA
WP_075791018.1\|329665_331129_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_075790901.1\|331179_332187_-	hydroxyquinol 1,2-dioxygenase	NA	NA	NA	NA
WP_075790902.1\|332245_332749_-	hydroxyquinol 1,2-dioxygenase	NA	NA	NA	NA
WP_075790903.1\|333128_335879_+	hypothetical protein	NA	NA	NA	NA
WP_075790904.1\|335893_336952_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_075790905.1\|336990_338241_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_075791019.1\|338304_339525_-	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_083684398.1\|339657_342102_-	RND family transporter	NA	NA	NA	NA
WP_156895503.1\|342098_343064_-	hypothetical protein	NA	NA	NA	NA
WP_156895494.1\|343246_344590_-	DUF1329 domain-containing protein	NA	NA	NA	NA
WP_083684428.1\|344615_346205_-	DUF1302 domain-containing protein	NA	NA	NA	NA
WP_075790908.1\|346367_347651_-	MFS transporter	NA	NA	NA	NA
WP_075790909.1\|347810_348764_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_075790910.1\|348788_350327_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_075790911.1\|350338_350887_-	hypothetical protein	NA	NA	NA	NA
WP_083684401.1\|350883_351291_-	cytochrome c	NA	NA	NA	NA
WP_075790913.1\|351392_352184_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	5.2e-18	32.3
WP_156895495.1\|352304_353526_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.9e-129	80.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019036

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP019038

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP019037

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection