CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007188	Campylobacter jejuni strain HF5-4A-4, complete genome	5 crisprs	DEDDh,WYL,cas14j,cas2,cas1,cas9	3	19	6	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007188_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007188_1

168795-168892

Orphan

Consensus_repeat	Method
TCTTGTTCTTTTTCTAGATTTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007188_1

>merge|NZ_CP007188|1|168795-168892|CRISPRCasFinder
TCTTGTTCTTTTTCTAGATTTTCTTTGCTTTCTTTATAAAGTGTTTCAGCAATTATTTCTTTTAAAATAATCTGCTTTTGTTCTTTTTCTAGATTTTC

>NZ_CP007188|1|1|168795-168892|CRISPRCasFinder
TCTTGTTCTTTTTCTAGATTTTC	TTTGCTTTCTTTATAAAGTGTTTCAGCAATTATTTCTTTTAAAATAATCTGC
TTTTGTTCTTTTTCTAGATTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007188.1\|WP_002790261.1\|163886_164201_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374352
NZ_CP007188.1\|WP_002870187.1\|167188_168322_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309383
NZ_CP007188.1\|WP_014517220.1\|161775_162087_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002806832.1\|170783_171269_-\|host-nuclease-inhibitor-protein-Gam	unknown	unknown	gnl\|CDD\|377819
NZ_CP007188.1\|WP_002790896.1\|162083_162437_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_075912925.1\|162788_163178_+\|DUF882-domain-containing-protein	unknown	unknown	gnl\|CDD\|311960
NZ_CP007188.1\|WP_002864977.1\|169594_169774_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002790266.1\|162433_162799_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002791413.1\|169888_170275_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370597
NZ_CP007188.1\|WP_002865465.1\|164290_165817_+\|phage-terminase-large-subunit	unknown	unknown	gnl\|CDD\|130691
NZ_CP007188.1\|WP_002784496.1\|163526_163775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002791419.1\|171375_171717_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002790256.1\|168926_169118_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234774
NZ_CP007188.1\|WP_002795448.1\|172032_172224_-\|DNA-directed-RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|377380
NZ_CP007188.1\|WP_052834784.1\|169169_169598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002791414.1\|170271_170544_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214915
NZ_CP007188.1\|WP_043012819.1\|170607_170787_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002827119.1\|163188_163530_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002824157.1\|171850_172036_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_044261469.1\|165813_167196_+\|DUF935-family-protein	unknown	unknown	gnl\|CDD\|368731

Protein	Function_ID	Function_description	E-value
NZ_CP007188.1\|WP_002790261.1\|163886_164201_+\|hypothetical-protein	gnl\|CDD\|374352	pfam16083, Phage_holin_3_3, LydA holin phage, holin superfamily III. Phage_holin_3_3 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as those of the bacteriophages of these organisms. Their primary function appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases. LydA and lydB are encoded on the dar operon. The phenotype of a rapid lysis in the absence of active LydB suggests that this protein might be an antagonist of the holin LydA.	0.00031578
NZ_CP007188.1\|WP_002790256.1\|168926_169118_-\|hypothetical-protein	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	0.000383031
NZ_CP007188.1\|WP_002870187.1\|167188_168322_+\|hypothetical-protein	gnl\|CDD\|309383	pfam04233, Phage_Mu_F, Phage Mu protein F like protein. Members of this family are found in double-stranded DNA bacteriophages, and in some bacteria. A member of this family is required for viral head morphogenesis in bacteriophage SPP1. This family is possibly a minor head protein. This family may be related to the family TT_ORF1 (pfam02956).	1.19327e-13
NZ_CP007188.1\|WP_002791414.1\|170271_170544_-\|hypothetical-protein	gnl\|CDD\|214915	smart00924, MgtE_N, MgtE intracellular N domain. This region is the integral membrane part of the eubacterial MgtE family of magnesium transporters. It is presumed to be an intracellular domain, that may be involved in magnesium binding.	0.00748422
NZ_CP007188.1\|WP_002806832.1\|170783_171269_-\|host-nuclease-inhibitor-protein-Gam	gnl\|CDD\|377819	pfam07352, Phage_Mu_Gam, Bacteriophage Mu Gam like protein. This family consists of bacterial and phage Gam proteins. The gam gene of bacteriophage Mu encodes a protein which protects linear double stranded DNA from exonuclease degradation in vitro and in vivo.	4.35689e-36
NZ_CP007188.1\|WP_075912925.1\|162788_163178_+\|DUF882-domain-containing-protein	gnl\|CDD\|311960	pfam08291, Peptidase_M15_3, Peptidase M15.	4.48828e-25
NZ_CP007188.1\|WP_002791413.1\|169888_170275_-\|hypothetical-protein	gnl\|CDD\|370597	pfam09643, YopX, YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	2.69618e-10
NZ_CP007188.1\|WP_002865465.1\|164290_165817_+\|phage-terminase-large-subunit	gnl\|CDD\|130691	TIGR01630, psiM2_ORF9, phage uncharacterized protein (putative large terminase), C-terminal domain. This model represents the C-terminal region of a set of phage proteins typically about 400-500 amino acids in length, although some members are considerably shorter. An article on Methanobacterium phage Psi-M2 ( calls the member from that phage, ORF9, a putative large terminase subunit, and ORF8 a candidate terminase small subunit. Most proteins in this family have an apparent P-loop nucleotide-binding sequence toward the N-terminus. [Mobile and extrachromosomal element functions, Prophage functions].	2.10454e-08
NZ_CP007188.1\|WP_002795448.1\|172032_172224_-\|DNA-directed-RNA-polymerase-sigma-70-factor	gnl\|CDD\|377380	pfam04545, Sigma70_r4, Sigma-70, region 4. Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif. Due to the way Pfam works, the threshold has been set artificially high to prevent overlaps with other helix-turn-helix families. Therefore there are many false negatives.	1.41194e-05
NZ_CP007188.1\|WP_044261469.1\|165813_167196_+\|DUF935-family-protein	gnl\|CDD\|368731	pfam06074, DUF935, Protein of unknown function (DUF935). This family consists of several bacterial proteins of unknown function as well as the Bacteriophage Mu gp29 protein.	5.43115e-28

>NZ_CP007188.1|WP_002870187.1|167188_168322_+|hypothetical-protein
MSNIFNKSVDEAYSYLENKGLKISFKYHEIKKQAHDRAFSAAGIMKTDVLNDLHEELKKAMKEGRNFNEFKNNLKELLTSKGWYGKKEITNPKTGEKRTININANRLKTIYHTNMQSAYAKARAKQLSTYSYKTYWVYKCALLEDSRSEHKKMHNCAIHRDDPFWKTSFPPNDYNCKCKVIAVSEKEARAKYKILENPKSIASKNFAYDKRENSQIPKETRISLDESLENLPKIQNYENLSDKELIDKVYEAFNVKKGDLLVDKIGDVISLDDDFFYDKKKQTTKIKKQNRHFYLDYFPKLINDPDEIRLSMDADPRFKGFTKKTYIKYFYDNGVKALVMVLNQKGNQINNKTMFLSEDNSYFKEILNQGKTIYKKQ
>NZ_CP007188.1|WP_044261469.1|165813_167196_+|DUF935-family-protein
MRILNKTARKSVASSVDFDSIIAALNSENFSELISIYDYFKRFDPQIASEVMKRRFKMCSFPMFITCKDETQRIFLQNYISKSDFRKFVFEMSAAVVYGFAAFLLEWKVKDLNVFPKLKYISPRFFSMDDKERLFIYNESKKLFVDECDDIFLHLHPSDSGSFIEQSLFYNVVSIAVLKQLAMSKNISYLDNLSVPPIIAKTTNANSDKEIEELLMQLSNLRSASVGIFNKDDMVELLNSGLSTSTFTDFLRYCDEAISKLISGQVLAGNAVQNGTQALGNVHEEVRLNVGEMDTLFLSKSIQKLLEQILKLNFAKPAEFEFVFDTNKEVDEQYLAGVYSTISSMGYEIPAEFLAKTFRIEGLKKKEVSTENYAFNSLMLEKNNRLSKDKIELNSSAEDEISDEIYEKIKAFWKECQSYEELEERIFKEYPNISFEKLKESLDKKIALASMQALLDTGNE
>NZ_CP007188.1|WP_002865465.1|164290_165817_+|phage-terminase-large-subunit
MDKLEINEIKSRLKALKFNHKEDKNLRRDRILKQGFKAFVFEYFPHHINFIKKESSNFRNFIYDNIDELEKKNNHLCFKAYRGSAKTTLLVRLFTLYSLLSNKKQYALIISSTLDIASESIASLKTELEENAKLINDFEIKLGDEWTSEAIVFTSFKIHKKIKAFGSGKKIRGTNYLGKRPDLIICDDIENDENVESKTQRDKLYKWFNKAILKLVARTQENYLYLVVGTILHQDSLLNRLNDDKRFLIYDFPLVLSFPDKLDLIDKNNILKSDLKGFKLDDENLNKIEILKEYFADTQSFFSEYQNKALSTENAIFSEYKIIEKEQDFDLVVLGIDPALGKAKGDYFAIAELKKVDKNKFHLKASGYKISPSKMIDVILKLYIKYLSLGKIVKIAIETIAFQEFFKDKLKEEALKLGIILSICELKNKVAKELRIDSLAPYINDGTILIDNNSNLLIEEMLTYPKAAHDDLLDASEMAFRIACSAANADYKAINRILSKRKIKKGFL
>NZ_CP007188.1|WP_002790261.1|163886_164201_+|hypothetical-protein
MKLEDIFVYMVLMIVSFIAGLVGIVTKNKLSKALNLKGKFTLFLKGMLGSMFVAYLVFEIVNYLNFGIKLSVAVGGFAAYMGTDALLKIEQLVEKLINKKLDKL
>NZ_CP007188.1|WP_002784496.1|163526_163775_+|hypothetical-protein
MNDKMRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK
>NZ_CP007188.1|WP_002827119.1|163188_163530_+|hypothetical-protein
MFSFILSRFLSPSKIAFFVLIALCGFLYLKNNALALENENLKLKALHFNNEINVFKDKLAQQNKAIDKLKLDLKPKETLKEVLKVDKVFIKDKSCESELKAYKELFNILGAKK
>NZ_CP007188.1|WP_075912925.1|162788_163178_+|DUF882-domain-containing-protein
MKNNPYFKESEFKCKCGKCELPQNVPSDELIDILCKIREHYNAPVIINSGYRCKEHNAEVGGAPKSQHAIGSAADFVVKGVKTEEVHQYVLITYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWTYP
>NZ_CP007188.1|WP_002790266.1|162433_162799_+|hypothetical-protein
MTLDSVSKDLLKHFNAIGIANYEDVKQGGLYLMLESLTSINHHKDSVNFSLIFSSHTFNKDKDSLIKKIDELRLKLFEFDTSKKLLSSIESGFISSSLFAYRLKFNIEIFSKPEGEEENEK
>NZ_CP007188.1|WP_002790896.1|162083_162437_+|hypothetical-protein
MIALLSPPKMLALTLKELALMKRAQQNLANIDEITREVVAKAAKDADDICKNKDIADFIWEDFAYIRIKIYLKIVLDDEDKILLDNALKRIENAPLIDKEGNLSSLRLKIMQRKDRF
>NZ_CP007188.1|WP_014517220.1|161775_162087_+|hypothetical-protein
MDNIVSANKLRNQNAILNPKENDDQKALFLKEKQEFEKEKALFLKEKQEFEKEKALFLKEKQEFEKEKALFLKEKQKTLEENEETIINESLKNKETKKGKQDK
>NZ_CP007188.1|WP_002790256.1|168926_169118_-|hypothetical-protein
MICPRCANEKTKVLKTIKSDTNERFRRCLKCGYTFMSIELIKVDNWAKYYIKETQKGLFDEAL
>NZ_CP007188.1|WP_052834784.1|169169_169598_-|hypothetical-protein
MSPKQAMLRKQLLAKIHMHKEYLYYKENNAWQDFLALRFEVLSSKDLSIDELKILLDIFDGKIKDDVNFTPDFKGRSMLKKASSNKQFFYLKALLKQTKMPIFSFYKLCKKTLKKDIYSLQTLSKKDCTIMLVVLEKIAKTK
>NZ_CP007188.1|WP_002864977.1|169594_169774_-|hypothetical-protein
MSKRNGALRAFKTLLKDVLNDENGFYKHKNGKVNIAKLSRVSGLSRSFLKKELYIRGLL
>NZ_CP007188.1|WP_002791413.1|169888_170275_-|hypothetical-protein
MKLQDFDFRVWDKHHKGCGNKDCKCQTKYVYGEEAKTRLSEFKEDCEIELFTGLYDKKGKKVYENDIVKVKSLYDYFLAKISIHKEGTFYFEGKNGDYIGSLIYLVEDEGYTIETIGNIHENPELLKC
>NZ_CP007188.1|WP_002791414.1|170271_170544_-|hypothetical-protein
MYVNVSIDASDLEDIDAHDLAELFEDLSTKEQEEFFGIIHKDIKPLERIRAILSNLSNDEALKLLKELNNEFKSDEEWQKTIKSINGGNK
>NZ_CP007188.1|WP_043012819.1|170607_170787_-|hypothetical-protein
MRELSLATFKLLNSVFKTKTAHFNGFLELDFKNKPKLKKQSFKRKKKMTSKQKIRLERI
>NZ_CP007188.1|WP_002806832.1|170783_171269_-|host-nuclease-inhibitor-protein-Gam
MQINNLEDVNLALKKVAELSVKIEKINGEVTLACNEIKEARAGEIKVLSDELKYIEQCITTFCENNKHEFAEKRSKEFTFGKIGYRLSKSVSLPRVKEKLENLIKALKSYGLNDCITYKEELNKDAIAELEDSTLVKLGLKRVVKDNFRIEPKIESLEIEK
>NZ_CP007188.1|WP_002791419.1|171375_171717_-|hypothetical-protein
MALVYVASPYKALVVRESQRKAQAISIAQQECLKIMRECEGFVPVSPILQFSYLDENKHRDKALQMGLELLKACDYIYLSKHKDAKYSQGMQEELALAKKLGIKELVLELPLQ
>NZ_CP007188.1|WP_002824157.1|171850_172036_-|hypothetical-protein
MIPMIKGEKADYSASLFEIKGVSIIYKESGVFVDVLKGIYPDYIAKKIIRFHLGKKLNKSA
>NZ_CP007188.1|WP_002795448.1|172032_172224_-|DNA-directed-RNA-polymerase-sigma-70-factor
MSFEEIAKELNLSVTRVHQIYTEALRKLKSPKNKDKWMAIFETIDLIKKEKAKKENLIQGEKK

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Crispr_ID: NZ_CP007188_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007188_2

297671-297768

Orphan

Consensus_repeat	Method
TCTTGTTCTTTTTCTAGATTTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007188_2

>merge|NZ_CP007188|2|297671-297768|CRISPRCasFinder
TCTTGTTCTTTTTCTAGATTTTCTTTGCTTTCTTTATAAAGTGTTTCAGCAATTATTTCTTTTAAAATAATCTGCTTTTGTTCTTTTTCTAGATTTTC

>NZ_CP007188|2|2|297671-297768|CRISPRCasFinder
TCTTGTTCTTTTTCTAGATTTTC	TTTGCTTTCTTTATAAAGTGTTTCAGCAATTATTTCTTTTAAAATAATCTGC
TTTTGTTCTTTTTCTAGATTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007188.1\|WP_002790266.1\|291309_291675_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_014517220.1\|290651_290963_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002791413.1\|298764_299151_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370597
NZ_CP007188.1\|WP_002791414.1\|299147_299420_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214915
NZ_CP007188.1\|WP_002865074.1\|300339_300678_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_075912930.1\|299659_300145_-\|host-nuclease-inhibitor-protein-Gam	unknown	unknown	gnl\|CDD\|377819
NZ_CP007188.1\|WP_002790256.1\|297802_297994_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234774
NZ_CP007188.1\|WP_002870187.1\|296064_297198_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309383
NZ_CP007188.1\|WP_002790751.1\|301608_302466_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225398
NZ_CP007188.1\|WP_002864977.1\|298470_298650_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_044261469.1\|294689_296072_+\|DUF935-family-protein	unknown	unknown	gnl\|CDD\|368731
NZ_CP007188.1\|WP_043012819.1\|299483_299663_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002784496.1\|292402_292651_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002827119.1\|292064_292406_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_075912925.1\|291664_292054_+\|DUF882-domain-containing-protein	unknown	unknown	gnl\|CDD\|311960
NZ_CP007188.1\|WP_002865465.1\|293166_294693_+\|phage-terminase-large-subunit	unknown	unknown	gnl\|CDD\|130691
NZ_CP007188.1\|WP_002795448.1\|301420_301612_-\|DNA-directed-RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|377380
NZ_CP007188.1\|WP_002790261.1\|292762_293077_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374352
NZ_CP007188.1\|WP_002790896.1\|290959_291313_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_052834784.1\|298045_298474_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007188.1\|WP_044261469.1\|294689_296072_+\|DUF935-family-protein	gnl\|CDD\|368731	pfam06074, DUF935, Protein of unknown function (DUF935). This family consists of several bacterial proteins of unknown function as well as the Bacteriophage Mu gp29 protein.	5.43115e-28
NZ_CP007188.1\|WP_002791413.1\|298764_299151_-\|hypothetical-protein	gnl\|CDD\|370597	pfam09643, YopX, YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	2.69618e-10
NZ_CP007188.1\|WP_002791414.1\|299147_299420_-\|hypothetical-protein	gnl\|CDD\|214915	smart00924, MgtE_N, MgtE intracellular N domain. This region is the integral membrane part of the eubacterial MgtE family of magnesium transporters. It is presumed to be an intracellular domain, that may be involved in magnesium binding.	0.00748422
NZ_CP007188.1\|WP_075912925.1\|291664_292054_+\|DUF882-domain-containing-protein	gnl\|CDD\|311960	pfam08291, Peptidase_M15_3, Peptidase M15.	4.48828e-25
NZ_CP007188.1\|WP_002865465.1\|293166_294693_+\|phage-terminase-large-subunit	gnl\|CDD\|130691	TIGR01630, psiM2_ORF9, phage uncharacterized protein (putative large terminase), C-terminal domain. This model represents the C-terminal region of a set of phage proteins typically about 400-500 amino acids in length, although some members are considerably shorter. An article on Methanobacterium phage Psi-M2 ( calls the member from that phage, ORF9, a putative large terminase subunit, and ORF8 a candidate terminase small subunit. Most proteins in this family have an apparent P-loop nucleotide-binding sequence toward the N-terminus. [Mobile and extrachromosomal element functions, Prophage functions].	2.10454e-08
NZ_CP007188.1\|WP_002790751.1\|301608_302466_-\|AAA-family-ATPase	gnl\|CDD\|225398	COG2842, COG2842, Uncharacterized ATPase, putative transposase [General function prediction only].	8.1738e-29
NZ_CP007188.1\|WP_002790256.1\|297802_297994_-\|hypothetical-protein	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	0.000383031
NZ_CP007188.1\|WP_002870187.1\|296064_297198_+\|hypothetical-protein	gnl\|CDD\|309383	pfam04233, Phage_Mu_F, Phage Mu protein F like protein. Members of this family are found in double-stranded DNA bacteriophages, and in some bacteria. A member of this family is required for viral head morphogenesis in bacteriophage SPP1. This family is possibly a minor head protein. This family may be related to the family TT_ORF1 (pfam02956).	1.19327e-13
NZ_CP007188.1\|WP_002795448.1\|301420_301612_-\|DNA-directed-RNA-polymerase-sigma-70-factor	gnl\|CDD\|377380	pfam04545, Sigma70_r4, Sigma-70, region 4. Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif. Due to the way Pfam works, the threshold has been set artificially high to prevent overlaps with other helix-turn-helix families. Therefore there are many false negatives.	1.41194e-05
NZ_CP007188.1\|WP_002790261.1\|292762_293077_+\|hypothetical-protein	gnl\|CDD\|374352	pfam16083, Phage_holin_3_3, LydA holin phage, holin superfamily III. Phage_holin_3_3 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as those of the bacteriophages of these organisms. Their primary function appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases. LydA and lydB are encoded on the dar operon. The phenotype of a rapid lysis in the absence of active LydB suggests that this protein might be an antagonist of the holin LydA.	0.00031578
NZ_CP007188.1\|WP_075912930.1\|299659_300145_-\|host-nuclease-inhibitor-protein-Gam	gnl\|CDD\|377819	pfam07352, Phage_Mu_Gam, Bacteriophage Mu Gam like protein. This family consists of bacterial and phage Gam proteins. The gam gene of bacteriophage Mu encodes a protein which protects linear double stranded DNA from exonuclease degradation in vitro and in vivo.	3.1249e-35

>NZ_CP007188.1|WP_002870187.1|296064_297198_+|hypothetical-protein
MSNIFNKSVDEAYSYLENKGLKISFKYHEIKKQAHDRAFSAAGIMKTDVLNDLHEELKKAMKEGRNFNEFKNNLKELLTSKGWYGKKEITNPKTGEKRTININANRLKTIYHTNMQSAYAKARAKQLSTYSYKTYWVYKCALLEDSRSEHKKMHNCAIHRDDPFWKTSFPPNDYNCKCKVIAVSEKEARAKYKILENPKSIASKNFAYDKRENSQIPKETRISLDESLENLPKIQNYENLSDKELIDKVYEAFNVKKGDLLVDKIGDVISLDDDFFYDKKKQTTKIKKQNRHFYLDYFPKLINDPDEIRLSMDADPRFKGFTKKTYIKYFYDNGVKALVMVLNQKGNQINNKTMFLSEDNSYFKEILNQGKTIYKKQ
>NZ_CP007188.1|WP_044261469.1|294689_296072_+|DUF935-family-protein
MRILNKTARKSVASSVDFDSIIAALNSENFSELISIYDYFKRFDPQIASEVMKRRFKMCSFPMFITCKDETQRIFLQNYISKSDFRKFVFEMSAAVVYGFAAFLLEWKVKDLNVFPKLKYISPRFFSMDDKERLFIYNESKKLFVDECDDIFLHLHPSDSGSFIEQSLFYNVVSIAVLKQLAMSKNISYLDNLSVPPIIAKTTNANSDKEIEELLMQLSNLRSASVGIFNKDDMVELLNSGLSTSTFTDFLRYCDEAISKLISGQVLAGNAVQNGTQALGNVHEEVRLNVGEMDTLFLSKSIQKLLEQILKLNFAKPAEFEFVFDTNKEVDEQYLAGVYSTISSMGYEIPAEFLAKTFRIEGLKKKEVSTENYAFNSLMLEKNNRLSKDKIELNSSAEDEISDEIYEKIKAFWKECQSYEELEERIFKEYPNISFEKLKESLDKKIALASMQALLDTGNE
>NZ_CP007188.1|WP_002865465.1|293166_294693_+|phage-terminase-large-subunit
MDKLEINEIKSRLKALKFNHKEDKNLRRDRILKQGFKAFVFEYFPHHINFIKKESSNFRNFIYDNIDELEKKNNHLCFKAYRGSAKTTLLVRLFTLYSLLSNKKQYALIISSTLDIASESIASLKTELEENAKLINDFEIKLGDEWTSEAIVFTSFKIHKKIKAFGSGKKIRGTNYLGKRPDLIICDDIENDENVESKTQRDKLYKWFNKAILKLVARTQENYLYLVVGTILHQDSLLNRLNDDKRFLIYDFPLVLSFPDKLDLIDKNNILKSDLKGFKLDDENLNKIEILKEYFADTQSFFSEYQNKALSTENAIFSEYKIIEKEQDFDLVVLGIDPALGKAKGDYFAIAELKKVDKNKFHLKASGYKISPSKMIDVILKLYIKYLSLGKIVKIAIETIAFQEFFKDKLKEEALKLGIILSICELKNKVAKELRIDSLAPYINDGTILIDNNSNLLIEEMLTYPKAAHDDLLDASEMAFRIACSAANADYKAINRILSKRKIKKGFL
>NZ_CP007188.1|WP_002790261.1|292762_293077_+|hypothetical-protein
MKLEDIFVYMVLMIVSFIAGLVGIVTKNKLSKALNLKGKFTLFLKGMLGSMFVAYLVFEIVNYLNFGIKLSVAVGGFAAYMGTDALLKIEQLVEKLINKKLDKL
>NZ_CP007188.1|WP_002784496.1|292402_292651_+|hypothetical-protein
MNDKMRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK
>NZ_CP007188.1|WP_002827119.1|292064_292406_+|hypothetical-protein
MFSFILSRFLSPSKIAFFVLIALCGFLYLKNNALALENENLKLKALHFNNEINVFKDKLAQQNKAIDKLKLDLKPKETLKEVLKVDKVFIKDKSCESELKAYKELFNILGAKK
>NZ_CP007188.1|WP_075912925.1|291664_292054_+|DUF882-domain-containing-protein
MKNNPYFKESEFKCKCGKCELPQNVPSDELIDILCKIREHYNAPVIINSGYRCKEHNAEVGGAPKSQHAIGSAADFVVKGVKTEEVHQYVLITYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWTYP
>NZ_CP007188.1|WP_002790266.1|291309_291675_+|hypothetical-protein
MTLDSVSKDLLKHFNAIGIANYEDVKQGGLYLMLESLTSINHHKDSVNFSLIFSSHTFNKDKDSLIKKIDELRLKLFEFDTSKKLLSSIESGFISSSLFAYRLKFNIEIFSKPEGEEENEK
>NZ_CP007188.1|WP_002790896.1|290959_291313_+|hypothetical-protein
MIALLSPPKMLALTLKELALMKRAQQNLANIDEITREVVAKAAKDADDICKNKDIADFIWEDFAYIRIKIYLKIVLDDEDKILLDNALKRIENAPLIDKEGNLSSLRLKIMQRKDRF
>NZ_CP007188.1|WP_014517220.1|290651_290963_+|hypothetical-protein
MDNIVSANKLRNQNAILNPKENDDQKALFLKEKQEFEKEKALFLKEKQEFEKEKALFLKEKQEFEKEKALFLKEKQKTLEENEETIINESLKNKETKKGKQDK
>NZ_CP007188.1|WP_002790256.1|297802_297994_-|hypothetical-protein
MICPRCANEKTKVLKTIKSDTNERFRRCLKCGYTFMSIELIKVDNWAKYYIKETQKGLFDEAL
>NZ_CP007188.1|WP_052834784.1|298045_298474_-|hypothetical-protein
MSPKQAMLRKQLLAKIHMHKEYLYYKENNAWQDFLALRFEVLSSKDLSIDELKILLDIFDGKIKDDVNFTPDFKGRSMLKKASSNKQFFYLKALLKQTKMPIFSFYKLCKKTLKKDIYSLQTLSKKDCTIMLVVLEKIAKTK
>NZ_CP007188.1|WP_002864977.1|298470_298650_-|hypothetical-protein
MSKRNGALRAFKTLLKDVLNDENGFYKHKNGKVNIAKLSRVSGLSRSFLKKELYIRGLL
>NZ_CP007188.1|WP_002791413.1|298764_299151_-|hypothetical-protein
MKLQDFDFRVWDKHHKGCGNKDCKCQTKYVYGEEAKTRLSEFKEDCEIELFTGLYDKKGKKVYENDIVKVKSLYDYFLAKISIHKEGTFYFEGKNGDYIGSLIYLVEDEGYTIETIGNIHENPELLKC
>NZ_CP007188.1|WP_002791414.1|299147_299420_-|hypothetical-protein
MYVNVSIDASDLEDIDAHDLAELFEDLSTKEQEEFFGIIHKDIKPLERIRAILSNLSNDEALKLLKELNNEFKSDEEWQKTIKSINGGNK
>NZ_CP007188.1|WP_043012819.1|299483_299663_-|hypothetical-protein
MRELSLATFKLLNSVFKTKTAHFNGFLELDFKNKPKLKKQSFKRKKKMTSKQKIRLERI
>NZ_CP007188.1|WP_075912930.1|299659_300145_-|host-nuclease-inhibitor-protein-Gam
MQINSFEDVNLALKKVAELSVKIEKINGEVTLACNEIKEARAGEIKVLSDELKYIEQCITTFCENNKHEFAEKRSKEFTFGKIGYRLSKSVSLPRVKEKLENLIKAFKSYNLNECIIYKEELNKDAIVELEDSTLVKLGLKRVVKDNFRIEPKIESLEIEK
>NZ_CP007188.1|WP_002865074.1|300339_300678_-|hypothetical-protein
MALVYVASPYKALAVRESQRKAQAISVAQQECLKIMRECEGFTPVSPILQFSYLDENKHRDKALQMGLELLKASDYIYMSNHKDAKYSKGMQEELALAKKLGIKELVLELPL
>NZ_CP007188.1|WP_002795448.1|301420_301612_-|DNA-directed-RNA-polymerase-sigma-70-factor
MSFEEIAKELNLSVTRVHQIYTEALRKLKSPKNKDKWMAIFETIDLIKKEKAKKENLIQGEKK
>NZ_CP007188.1|WP_002790751.1|301608_302466_-|AAA-family-ATPase
MQELSKELECFLEQSGMKPSALARAIGASASLISQIKSASYKGDVALWSKKIRDFIANHKDKQNEKPKKEQLFRSRDFSMATFVMSEAVNEKEIALIFGEAGTGKTTIINEFIKTRPQSILIEATCHTSVGVMLDELLNALKIEANSNNASKLKAIARFLKTNEKILIVDEAEYLPLKALEDLRRIADFARVPLILVGTEILYKNLMGKNKELKQLYSRICGKWMMRGLSKEESDEFFGKGYFKFSNGNFRSSAKLLKKALRLAELEECEINDELLTSASEMVIL

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007188_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007188_3

1377911-1378008

Orphan

Consensus_repeat	Method
TCTTGTTCTTTTTCTAGATTTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007188_3

>merge|NZ_CP007188|3|1377911-1378008|CRISPRCasFinder
TCTTGTTCTTTTTCTAGATTTTCTTTGCTTTCTTTATAAAGTGTTTCAGCAATTATTTCTTTTAAAATAATCTGCTTTTGTTCTTTTTCTAGATTTTC

>NZ_CP007188|3|3|1377911-1378008|CRISPRCasFinder
TCTTGTTCTTTTTCTAGATTTTC	TTTGCTTTCTTTATAAAGTGTTTCAGCAATTATTTCTTTTAAAATAATCTGC
TTTTGTTCTTTTTCTAGATTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007188.1\|WP_052834784.1\|1378285_1378714_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002791413.1\|1379004_1379391_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370597
NZ_CP007188.1\|WP_002864977.1\|1378710_1378890_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002791419.1\|1380491_1380833_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002790896.1\|1371199_1371553_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002790256.1\|1378042_1378234_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234774
NZ_CP007188.1\|WP_002784496.1\|1372642_1372891_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002806832.1\|1379899_1380385_-\|host-nuclease-inhibitor-protein-Gam	unknown	unknown	gnl\|CDD\|377819
NZ_CP007188.1\|WP_002824157.1\|1380966_1381152_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002870187.1\|1376304_1377438_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309383
NZ_CP007188.1\|WP_002795448.1\|1381148_1381340_-\|DNA-directed-RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|377380
NZ_CP007188.1\|WP_044261469.1\|1374929_1376312_+\|DUF935-family-protein	unknown	unknown	gnl\|CDD\|368731
NZ_CP007188.1\|WP_043012819.1\|1379723_1379903_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_075912925.1\|1371904_1372294_+\|DUF882-domain-containing-protein	unknown	unknown	gnl\|CDD\|311960
NZ_CP007188.1\|WP_002827119.1\|1372304_1372646_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_014517220.1\|1370891_1371203_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002865465.1\|1373406_1374933_+\|phage-terminase-large-subunit	unknown	unknown	gnl\|CDD\|130691
NZ_CP007188.1\|WP_002791414.1\|1379387_1379660_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214915
NZ_CP007188.1\|WP_002790261.1\|1373002_1373317_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374352
NZ_CP007188.1\|WP_002790266.1\|1371549_1371915_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007188.1\|WP_075912925.1\|1371904_1372294_+\|DUF882-domain-containing-protein	gnl\|CDD\|311960	pfam08291, Peptidase_M15_3, Peptidase M15.	4.48828e-25
NZ_CP007188.1\|WP_002791413.1\|1379004_1379391_-\|hypothetical-protein	gnl\|CDD\|370597	pfam09643, YopX, YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	2.69618e-10
NZ_CP007188.1\|WP_002795448.1\|1381148_1381340_-\|DNA-directed-RNA-polymerase-sigma-70-factor	gnl\|CDD\|377380	pfam04545, Sigma70_r4, Sigma-70, region 4. Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif. Due to the way Pfam works, the threshold has been set artificially high to prevent overlaps with other helix-turn-helix families. Therefore there are many false negatives.	1.41194e-05
NZ_CP007188.1\|WP_044261469.1\|1374929_1376312_+\|DUF935-family-protein	gnl\|CDD\|368731	pfam06074, DUF935, Protein of unknown function (DUF935). This family consists of several bacterial proteins of unknown function as well as the Bacteriophage Mu gp29 protein.	5.43115e-28
NZ_CP007188.1\|WP_002870187.1\|1376304_1377438_+\|hypothetical-protein	gnl\|CDD\|309383	pfam04233, Phage_Mu_F, Phage Mu protein F like protein. Members of this family are found in double-stranded DNA bacteriophages, and in some bacteria. A member of this family is required for viral head morphogenesis in bacteriophage SPP1. This family is possibly a minor head protein. This family may be related to the family TT_ORF1 (pfam02956).	1.19327e-13
NZ_CP007188.1\|WP_002790261.1\|1373002_1373317_+\|hypothetical-protein	gnl\|CDD\|374352	pfam16083, Phage_holin_3_3, LydA holin phage, holin superfamily III. Phage_holin_3_3 is a family of small hydrophobic holin proteins with one or more transmembrane domains. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as those of the bacteriophages of these organisms. Their primary function appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded, these enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases. LydA and lydB are encoded on the dar operon. The phenotype of a rapid lysis in the absence of active LydB suggests that this protein might be an antagonist of the holin LydA.	0.00031578
NZ_CP007188.1\|WP_002865465.1\|1373406_1374933_+\|phage-terminase-large-subunit	gnl\|CDD\|130691	TIGR01630, psiM2_ORF9, phage uncharacterized protein (putative large terminase), C-terminal domain. This model represents the C-terminal region of a set of phage proteins typically about 400-500 amino acids in length, although some members are considerably shorter. An article on Methanobacterium phage Psi-M2 ( calls the member from that phage, ORF9, a putative large terminase subunit, and ORF8 a candidate terminase small subunit. Most proteins in this family have an apparent P-loop nucleotide-binding sequence toward the N-terminus. [Mobile and extrachromosomal element functions, Prophage functions].	2.10454e-08
NZ_CP007188.1\|WP_002790256.1\|1378042_1378234_-\|hypothetical-protein	gnl\|CDD\|234774	PRK00464, nrdR, transcriptional repressor NrdR.	0.000383031
NZ_CP007188.1\|WP_002806832.1\|1379899_1380385_-\|host-nuclease-inhibitor-protein-Gam	gnl\|CDD\|377819	pfam07352, Phage_Mu_Gam, Bacteriophage Mu Gam like protein. This family consists of bacterial and phage Gam proteins. The gam gene of bacteriophage Mu encodes a protein which protects linear double stranded DNA from exonuclease degradation in vitro and in vivo.	4.35689e-36
NZ_CP007188.1\|WP_002791414.1\|1379387_1379660_-\|hypothetical-protein	gnl\|CDD\|214915	smart00924, MgtE_N, MgtE intracellular N domain. This region is the integral membrane part of the eubacterial MgtE family of magnesium transporters. It is presumed to be an intracellular domain, that may be involved in magnesium binding.	0.00748422

>NZ_CP007188.1|WP_002870187.1|1376304_1377438_+|hypothetical-protein
MSNIFNKSVDEAYSYLENKGLKISFKYHEIKKQAHDRAFSAAGIMKTDVLNDLHEELKKAMKEGRNFNEFKNNLKELLTSKGWYGKKEITNPKTGEKRTININANRLKTIYHTNMQSAYAKARAKQLSTYSYKTYWVYKCALLEDSRSEHKKMHNCAIHRDDPFWKTSFPPNDYNCKCKVIAVSEKEARAKYKILENPKSIASKNFAYDKRENSQIPKETRISLDESLENLPKIQNYENLSDKELIDKVYEAFNVKKGDLLVDKIGDVISLDDDFFYDKKKQTTKIKKQNRHFYLDYFPKLINDPDEIRLSMDADPRFKGFTKKTYIKYFYDNGVKALVMVLNQKGNQINNKTMFLSEDNSYFKEILNQGKTIYKKQ
>NZ_CP007188.1|WP_044261469.1|1374929_1376312_+|DUF935-family-protein
MRILNKTARKSVASSVDFDSIIAALNSENFSELISIYDYFKRFDPQIASEVMKRRFKMCSFPMFITCKDETQRIFLQNYISKSDFRKFVFEMSAAVVYGFAAFLLEWKVKDLNVFPKLKYISPRFFSMDDKERLFIYNESKKLFVDECDDIFLHLHPSDSGSFIEQSLFYNVVSIAVLKQLAMSKNISYLDNLSVPPIIAKTTNANSDKEIEELLMQLSNLRSASVGIFNKDDMVELLNSGLSTSTFTDFLRYCDEAISKLISGQVLAGNAVQNGTQALGNVHEEVRLNVGEMDTLFLSKSIQKLLEQILKLNFAKPAEFEFVFDTNKEVDEQYLAGVYSTISSMGYEIPAEFLAKTFRIEGLKKKEVSTENYAFNSLMLEKNNRLSKDKIELNSSAEDEISDEIYEKIKAFWKECQSYEELEERIFKEYPNISFEKLKESLDKKIALASMQALLDTGNE
>NZ_CP007188.1|WP_002865465.1|1373406_1374933_+|phage-terminase-large-subunit
MDKLEINEIKSRLKALKFNHKEDKNLRRDRILKQGFKAFVFEYFPHHINFIKKESSNFRNFIYDNIDELEKKNNHLCFKAYRGSAKTTLLVRLFTLYSLLSNKKQYALIISSTLDIASESIASLKTELEENAKLINDFEIKLGDEWTSEAIVFTSFKIHKKIKAFGSGKKIRGTNYLGKRPDLIICDDIENDENVESKTQRDKLYKWFNKAILKLVARTQENYLYLVVGTILHQDSLLNRLNDDKRFLIYDFPLVLSFPDKLDLIDKNNILKSDLKGFKLDDENLNKIEILKEYFADTQSFFSEYQNKALSTENAIFSEYKIIEKEQDFDLVVLGIDPALGKAKGDYFAIAELKKVDKNKFHLKASGYKISPSKMIDVILKLYIKYLSLGKIVKIAIETIAFQEFFKDKLKEEALKLGIILSICELKNKVAKELRIDSLAPYINDGTILIDNNSNLLIEEMLTYPKAAHDDLLDASEMAFRIACSAANADYKAINRILSKRKIKKGFL
>NZ_CP007188.1|WP_002790261.1|1373002_1373317_+|hypothetical-protein
MKLEDIFVYMVLMIVSFIAGLVGIVTKNKLSKALNLKGKFTLFLKGMLGSMFVAYLVFEIVNYLNFGIKLSVAVGGFAAYMGTDALLKIEQLVEKLINKKLDKL
>NZ_CP007188.1|WP_002784496.1|1372642_1372891_+|hypothetical-protein
MNDKMRIFLLIIPFVFLSACASKDILIKTEIKEVKVPIKCPLKLPLKPLDKKDLESAKEISKYYLEVENIAKLCTGEKDERK
>NZ_CP007188.1|WP_002827119.1|1372304_1372646_+|hypothetical-protein
MFSFILSRFLSPSKIAFFVLIALCGFLYLKNNALALENENLKLKALHFNNEINVFKDKLAQQNKAIDKLKLDLKPKETLKEVLKVDKVFIKDKSCESELKAYKELFNILGAKK
>NZ_CP007188.1|WP_075912925.1|1371904_1372294_+|DUF882-domain-containing-protein
MKNNPYFKESEFKCKCGKCELPQNVPSDELIDILCKIREHYNAPVIINSGYRCKEHNAEVGGAPKSQHAIGSAADFVVKGVKTEEVHQYVLITYGERGLGIAIKHNFNDPYAGFVHLDTRGKKARWTYP
>NZ_CP007188.1|WP_002790266.1|1371549_1371915_+|hypothetical-protein
MTLDSVSKDLLKHFNAIGIANYEDVKQGGLYLMLESLTSINHHKDSVNFSLIFSSHTFNKDKDSLIKKIDELRLKLFEFDTSKKLLSSIESGFISSSLFAYRLKFNIEIFSKPEGEEENEK
>NZ_CP007188.1|WP_002790896.1|1371199_1371553_+|hypothetical-protein
MIALLSPPKMLALTLKELALMKRAQQNLANIDEITREVVAKAAKDADDICKNKDIADFIWEDFAYIRIKIYLKIVLDDEDKILLDNALKRIENAPLIDKEGNLSSLRLKIMQRKDRF
>NZ_CP007188.1|WP_014517220.1|1370891_1371203_+|hypothetical-protein
MDNIVSANKLRNQNAILNPKENDDQKALFLKEKQEFEKEKALFLKEKQEFEKEKALFLKEKQEFEKEKALFLKEKQKTLEENEETIINESLKNKETKKGKQDK
>NZ_CP007188.1|WP_002790256.1|1378042_1378234_-|hypothetical-protein
MICPRCANEKTKVLKTIKSDTNERFRRCLKCGYTFMSIELIKVDNWAKYYIKETQKGLFDEAL
>NZ_CP007188.1|WP_052834784.1|1378285_1378714_-|hypothetical-protein
MSPKQAMLRKQLLAKIHMHKEYLYYKENNAWQDFLALRFEVLSSKDLSIDELKILLDIFDGKIKDDVNFTPDFKGRSMLKKASSNKQFFYLKALLKQTKMPIFSFYKLCKKTLKKDIYSLQTLSKKDCTIMLVVLEKIAKTK
>NZ_CP007188.1|WP_002864977.1|1378710_1378890_-|hypothetical-protein
MSKRNGALRAFKTLLKDVLNDENGFYKHKNGKVNIAKLSRVSGLSRSFLKKELYIRGLL
>NZ_CP007188.1|WP_002791413.1|1379004_1379391_-|hypothetical-protein
MKLQDFDFRVWDKHHKGCGNKDCKCQTKYVYGEEAKTRLSEFKEDCEIELFTGLYDKKGKKVYENDIVKVKSLYDYFLAKISIHKEGTFYFEGKNGDYIGSLIYLVEDEGYTIETIGNIHENPELLKC
>NZ_CP007188.1|WP_002791414.1|1379387_1379660_-|hypothetical-protein
MYVNVSIDASDLEDIDAHDLAELFEDLSTKEQEEFFGIIHKDIKPLERIRAILSNLSNDEALKLLKELNNEFKSDEEWQKTIKSINGGNK
>NZ_CP007188.1|WP_043012819.1|1379723_1379903_-|hypothetical-protein
MRELSLATFKLLNSVFKTKTAHFNGFLELDFKNKPKLKKQSFKRKKKMTSKQKIRLERI
>NZ_CP007188.1|WP_002806832.1|1379899_1380385_-|host-nuclease-inhibitor-protein-Gam
MQINNLEDVNLALKKVAELSVKIEKINGEVTLACNEIKEARAGEIKVLSDELKYIEQCITTFCENNKHEFAEKRSKEFTFGKIGYRLSKSVSLPRVKEKLENLIKALKSYGLNDCITYKEELNKDAIAELEDSTLVKLGLKRVVKDNFRIEPKIESLEIEK
>NZ_CP007188.1|WP_002791419.1|1380491_1380833_-|hypothetical-protein
MALVYVASPYKALVVRESQRKAQAISIAQQECLKIMRECEGFVPVSPILQFSYLDENKHRDKALQMGLELLKACDYIYLSKHKDAKYSQGMQEELALAKKLGIKELVLELPLQ
>NZ_CP007188.1|WP_002824157.1|1380966_1381152_-|hypothetical-protein
MIPMIKGEKADYSASLFEIKGVSIIYKESGVFVDVLKGIYPDYIAKKIIRFHLGKKLNKSA
>NZ_CP007188.1|WP_002795448.1|1381148_1381340_-|DNA-directed-RNA-polymerase-sigma-70-factor
MSFEEIAKELNLSVTRVHQIYTEALRKLKSPKNKDKWMAIFETIDLIKKEKAKKENLIQGEKK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007188_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007188_4

1487242-1487321

Orphan

Consensus_repeat	Method
TCTTTTTGTTCTTTTAAAGCTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007188_4

>merge|NZ_CP007188|4|1487242-1487321|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTCTTTTTTAGCTTTATACTCAGCCTTACTCATATAATCTTTTTGTTCTTTTAAAGCATC

>NZ_CP007188|4|4|1487242-1487321|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTC	TTTTTTAGCTTTATACTCAGCCTTACTCATATAA
TCTTTTTGTTCTTTTAAAGCATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007188.1\|WP_002855339.1\|1486841_1487168_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|223870
NZ_CP007188.1\|WP_002852383.1\|1487623_1488994_-\|phosphoglucosamine-mutase-PgmL	unknown	unknown	gnl\|CDD\|100091
NZ_CP007188.1\|WP_002855324.1\|1484005_1485208_-\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_CP007188.1\|WP_002780456.1\|1482509_1483334_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|181416
NZ_CP007188.1\|WP_002780453.1\|1485210_1486209_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NZ_CP007188.1\|WP_002855429.1\|1489115_1489652_+\|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl\|CDD\|181433
NZ_CP007188.1\|WP_002857891.1\|1494148_1496218_-\|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226093
NZ_CP007188.1\|WP_002855307.1\|1490415_1491777_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP007188.1\|WP_002858304.1\|1491773_1492895_-\|membrane-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002855470.1\|1486268_1486814_+\|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|223985
NZ_CP007188.1\|WP_002857981.1\|1492967_1494152_-\|capsule-polysaccharide-modification-protein-KpsS	unknown	unknown	gnl\|CDD\|226092
NZ_CP007188.1\|WP_052834767.1\|1481012_1482506_-\|hydrogenase-small-subunit	unknown	unknown	gnl\|CDD\|224654
NZ_CP007188.1\|WP_002857989.1\|1476156_1477524_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|176469
NZ_CP007188.1\|WP_002858404.1\|1496716_1497478_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224134
NZ_CP007188.1\|WP_002825806.1\|1489651_1489999_+\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|223807
NZ_CP007188.1\|WP_002858462.1\|1496214_1496727_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|235498
NZ_CP007188.1\|WP_052834768.1\|1479174_1481016_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP007188.1\|WP_002855518.1\|1489999_1490419_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007188.1\|WP_002855528.1\|1483337_1484009_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_CP007188.1\|WP_002779147.1\|1478953_1479178_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|224830

Protein	Function_ID	Function_description	E-value
NZ_CP007188.1\|WP_002855339.1\|1486841_1487168_+\|ribosome-silencing-factor	gnl\|CDD\|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	8.97235e-38
NZ_CP007188.1\|WP_002852383.1\|1487623_1488994_-\|phosphoglucosamine-mutase-PgmL	gnl\|CDD\|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP007188.1\|WP_002855324.1\|1484005_1485208_-\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP007188.1\|WP_002780456.1\|1482509_1483334_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP007188.1\|WP_002780453.1\|1485210_1486209_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	2.96117e-168
NZ_CP007188.1\|WP_002855429.1\|1489115_1489652_+\|flagellar-basal-body-associated-protein-FliL	gnl\|CDD\|181433	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.19231e-91
NZ_CP007188.1\|WP_002857891.1\|1494148_1496218_-\|capsular-polysaccharide-biosynthesis-protein	gnl\|CDD\|226093	COG3563, KpsC, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP007188.1\|WP_002855307.1\|1490415_1491777_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.74847e-77
NZ_CP007188.1\|WP_002855470.1\|1486268_1486814_+\|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl\|CDD\|223985	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].	3.16494e-57
NZ_CP007188.1\|WP_002857981.1\|1492967_1494152_-\|capsule-polysaccharide-modification-protein-KpsS	gnl\|CDD\|226092	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP007188.1\|WP_052834767.1\|1481012_1482506_-\|hydrogenase-small-subunit	gnl\|CDD\|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	4.90577e-157
NZ_CP007188.1\|WP_002857989.1\|1476156_1477524_+\|adenylosuccinate-lyase	gnl\|CDD\|176469	cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.	0
NZ_CP007188.1\|WP_002858404.1\|1496716_1497478_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|224134	COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane].	3.82934e-76
NZ_CP007188.1\|WP_002825806.1\|1489651_1489999_+\|holo-ACP-synthase	gnl\|CDD\|223807	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism].	3.71491e-40
NZ_CP007188.1\|WP_002858462.1\|1496214_1496727_-\|adenylyl-sulfate-kinase	gnl\|CDD\|235498	PRK05541, PRK05541, adenylylsulfate kinase; Provisional.	1.00012e-100
NZ_CP007188.1\|WP_052834768.1\|1479174_1481016_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP007188.1\|WP_002855528.1\|1483337_1484009_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	2.79646e-86
NZ_CP007188.1\|WP_002779147.1\|1478953_1479178_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.69416e-22

>NZ_CP007188.1|WP_002855339.1|1486841_1487168_+|ribosome-silencing-factor
MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKGRV
>NZ_CP007188.1|WP_002855470.1|1486268_1486814_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKIALFGGSFDPPHNGHNSVILEALEKLDIDKLIIMPTYINPFKQNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNTNEVCEEIKDEVKKYYEKLQKN
>NZ_CP007188.1|WP_002780453.1|1485210_1486209_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDDERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA
>NZ_CP007188.1|WP_002855324.1|1484005_1485208_-|phosphoglycerate-kinase
MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKENE
>NZ_CP007188.1|WP_002855528.1|1483337_1484009_-|triose-phosphate-isomerase
MIFAANLKCNHTRASFKIYAKILNKTMGVKCDDIIVFPPSIAFLENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGVSAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFIKLIKG
>NZ_CP007188.1|WP_002780456.1|1482509_1483334_-|enoyl-ACP-reductase-FabI
MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG
>NZ_CP007188.1|WP_052834767.1|1481012_1482506_-|hydrogenase-small-subunit
MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLSLGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKGPYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYTFIEQNFDENPMPSKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAEKPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKTFGDNIAKISSLKAS
>NZ_CP007188.1|WP_052834768.1|1479174_1481016_+|ferrous-iron-transport-protein-B
MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKSFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKIIILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNTLGEFVKNNISNTFIASALADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFQPLELDWKLSVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIYNPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN
>NZ_CP007188.1|WP_002779147.1|1478953_1479178_+|ferrous-iron-transport-protein-A
MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSLKNATIMVELDTSCVILRSDEAKTIEVNLI
>NZ_CP007188.1|WP_002857989.1|1476156_1477524_+|adenylosuccinate-lyase
MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKAQAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEYVHFRVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQALPITFGHKVAIWLSELDRHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLENLGLEVPNISWQSTRDRFIELGFVLGNINATFNKIAHQLLILSHNEIDEVAEPFGKGQVGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMFLMLSVVLANMKFALSDLEVKKDKMLKNLDTLKGFVLAERVMFALSDHYGKQHAHEIVYENAMLGIEQQKTFKEVLLADTRVSQVLKEKDIDALLDATSYVGYAPKLVDEFLAKIKNSAILK
>NZ_CP007188.1|WP_002852383.1|1487623_1488994_-|phosphoglucosamine-mutase-PgmL
MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILSLYVKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAKPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTYVFCGDELCYLFAKNIPNPRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEIKARLKN
>NZ_CP007188.1|WP_002855429.1|1489115_1489652_+|flagellar-basal-body-associated-protein-FliL
MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDFVVS
>NZ_CP007188.1|WP_002825806.1|1489651_1489999_+|holo-ACP-synthase
MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAGLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSISHDNGFAIAIVAIV
>NZ_CP007188.1|WP_002855518.1|1489999_1490419_-|hypothetical-protein
MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGYLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKITDFFQKDHCKRANKREQPVVDFIISRNLDKQTIGK
>NZ_CP007188.1|WP_002855307.1|1490415_1491777_-|cytochrome-P450
MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVKMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAIIEVDEAMTFITADVIFRTIMSSKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQVLSDIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKKDTQVRDKLIKKDSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKREL
>NZ_CP007188.1|WP_002858304.1|1491773_1492895_-|membrane-protein
MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKADLSKIEKNEQFPFFQISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKFGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLNHFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQERIKLFANTIVDKLKQNENKQDYELVLVAHSVGTIVCIEVLECILRQNLDLSLLHKLKILTLGECIPLVSYQKKADEFRKKLEFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI
>NZ_CP007188.1|WP_002857981.1|1492967_1494152_-|capsule-polysaccharide-modification-protein-KpsS
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKIDAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK
>NZ_CP007188.1|WP_002857891.1|1494148_1496218_-|capsular-polysaccharide-biosynthesis-protein
MKYYSISKKLIANVRNFYTISLYKKNLKIKKDDLFFGWGRKKSGLKAMNLAKKYKAKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDATMPSKLENLLNTCEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDNYFQKDEKRVLIITQTANDASLEFGLAKDFKTLDMIKDAIKENPKSTIYIKIHPDVLSGKKQSDLDLNSLPKECILITENFNPIALLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKRSLEEVFYAAYILYAEYFNPYLNQKSNIFDTIQTLAKYKDIEKVNSNKLFMLGFTLWKRHFIKPFFKAKDNEIIFLNSLKSLARYKLKENDKFFIWGKRIDYNALKTTLIKKAQDENLLHFTPKISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKASKLEELLQNEIFDENMLNRAKNIIKILLENRFSKYNGLKHEDLKINAKIGQKIILIPAQVEDDASMILGGFGLSTLDLLKEVRAKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSAIKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRIRKLSLEELVAGALIIYPRYINPKTKTLCEIEVCLDIMLNLQKAYFSKKYIKLAIDFKTFMLRKIRRFYEFLAKK
>NZ_CP007188.1|WP_002858462.1|1496214_1496727_-|adenylyl-sulfate-kinase
MKNNPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDELREILGHYAYDRQGRIDMALKRAKFAKFLNDQGMMVIVTTISMFNEIYDYNRKQLKNYYEIYIECDMHELIQRDQKGLYTKALNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEKVELIIKKLAL
>NZ_CP007188.1|WP_002858404.1|1496716_1497478_-|NTP-transferase-domain-containing-protein
MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSAGINEIAVVGGYLNDVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFMLKCIEEKQDLIISYADIVYFQDCVQKLINAKEELAIVVDKSWCKLWSKRFANPLEDAETLKMTNGYIIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSFLQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIEK

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Crispr_ID: NZ_CP007188_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007188_5

1602972-1603403

TypeII

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder

6 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP007188_5

>merge|NZ_CP007188|5|1602972-1603403|CRT,PILER-CR,CRISPRCasFinder
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTATGGCAGTTTTTAAAAGAGCTTGGCGGTTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAAACTAATGTGTGGATTTTTGTTTAATGCTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATCTACAAGAATGAGGATGATGATATTTTACAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTCCATTCTCATAAAATATTTAGCCATTATTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTTTCCAAAGTTTCATTAGTTGAATTTAACTGTTTTAGTCCCTTTTTAAATTTTTTTATGGTAAAATTTTTGTTGAGTGGGTTATGAGCCAAAAGAAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP007188|5|1|1602972-1603403|CRT
ATTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATGGCAGTTTTTAAAAGAGCTTGGCGGTT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AAACTAATGTGTGGATTTTTGTTTAATGCT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CTACAAGAATGAGGATGATGATATTTTACA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TCCATTCTCATAAAATATTTAGCCATTATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTTCCAAAGTTTCATTAGTTGAATTTAACT
GTTTTAGTCCCTTTTTAAATTTTTTTATGGTAAAAT	TTTTGTTGAGTGGGTTATGAGCCAAAAGAA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP007188|5|1|1602973-1603403|PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	ATGGCAGTTTTTAAAAGAGCTTGGCGGTTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATA	AACTAATGTGTGGATTTTTGTTTAATGCTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATC	TACAAGAATGAGGATGATGATATTTTACAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	CCATTCTCATAAAATATTTAGCCATTATTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATT	TTCCAAAGTTTCATTAGTTGAATTTAACTG
TTTTAGTCCCTTTTTAAATTTTTTTATGGTAAAATT	TTTGTTGAGTGGGTTATGAGCCAAAAGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP007188|5|5|1602973-1603403|CRISPRCasFinder
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TATGGCAGTTTTTAAAAGAGCTTGGCGGTTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AAACTAATGTGTGGATTTTTGTTTAATGCTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CTACAAGAATGAGGATGATGATATTTTACAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TCCATTCTCATAAAATATTTAGCCATTATTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TTTCCAAAGTTTCATTAGTTGAATTTAACTG
TTTTAGTCCCTTTTTAAATTTTTTTATGGTAAAAT	TTTTGTTGAGTGGGTTATGAGCCAAAAGAAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007188.1\|WP_002851320.1\|1609482_1610472_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP007188.1\|WP_002851155.1\|1612586_1613624_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224292
NZ_CP007188.1\|WP_002851174.1\|1592620_1593553_-\|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl\|CDD\|130645
NZ_CP007188.1\|WP_052834735.1\|1604858_1607813_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP007188.1\|WP_002781229.1\|1601211_1601658_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|223391
NZ_CP007188.1\|WP_002858151.1\|1601661_1602852_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|223380
NZ_CP007188.1\|WP_010891941.1\|1594187_1596992_-\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|239153
NZ_CP007188.1\|WP_002851173.1\|1611134_1611884_+\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP007188.1\|WP_002851537.1\|1596991_1597183_-\|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl\|CDD\|236534
NZ_CP007188.1\|WP_002851546.1\|1613688_1614138_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NZ_CP007188.1\|WP_002797819.1\|1603971_1604862_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP007188.1\|WP_002855462.1\|1614267_1615488_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|235168
NZ_CP007188.1\|WP_002797817.1\|1603547_1603979_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP007188.1\|WP_002858431.1\|1598174_1599323_-\|carboxynorspermidine-decarboxylase	unknown	unknown	gnl\|CDD\|273414
NZ_CP007188.1\|WP_002851407.1\|1611858_1612590_+\|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	unknown	unknown	gnl\|CDD\|225539
NZ_CP007188.1\|WP_002858205.1\|1599446_1600988_+\|multicopper-oxidase-CueO	unknown	unknown	gnl\|CDD\|225043
NZ_CP007188.1\|WP_002851502.1\|1597157_1597871_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225916
NZ_CP007188.1\|WP_002851523.1\|1610532_1611138_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP007188.1\|WP_002851264.1\|1593549_1594191_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|319893
NZ_CP007188.1\|WP_002857949.1\|1600989_1601211_+\|MoaD/ThiS-family-protein	unknown	unknown	gnl\|CDD\|224888

Protein	Function_ID	Function_description	E-value
NZ_CP007188.1\|WP_002851320.1\|1609482_1610472_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP007188.1\|WP_002851155.1\|1612586_1613624_-\|ATP-binding-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.54942e-34
NZ_CP007188.1\|WP_002851174.1\|1592620_1593553_-\|formate-dehydrogenase-subunit-gamma	gnl\|CDD\|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.78832e-90
NZ_CP007188.1\|WP_052834735.1\|1604858_1607813_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP007188.1\|WP_002781229.1\|1601211_1601658_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	1.4187e-43
NZ_CP007188.1\|WP_002858151.1\|1601661_1602852_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	2.37307e-143
NZ_CP007188.1\|WP_010891941.1\|1594187_1596992_-\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP007188.1\|WP_002851173.1\|1611134_1611884_+\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.97072e-93
NZ_CP007188.1\|WP_002851537.1\|1596991_1597183_-\|twin-arginine-translocation-signal-domain-containing-protein	gnl\|CDD\|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NZ_CP007188.1\|WP_002851546.1\|1613688_1614138_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.92874e-51
NZ_CP007188.1\|WP_002797819.1\|1603971_1604862_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.93781e-121
NZ_CP007188.1\|WP_002855462.1\|1614267_1615488_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|235168	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP007188.1\|WP_002797817.1\|1603547_1603979_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.92184e-59
NZ_CP007188.1\|WP_002858431.1\|1598174_1599323_-\|carboxynorspermidine-decarboxylase	gnl\|CDD\|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP007188.1\|WP_002851407.1\|1611858_1612590_+\|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase	gnl\|CDD\|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	2.12305e-102
NZ_CP007188.1\|WP_002858205.1\|1599446_1600988_+\|multicopper-oxidase-CueO	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	2.73566e-121
NZ_CP007188.1\|WP_002851502.1\|1597157_1597871_-\|hypothetical-protein	gnl\|CDD\|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.00059716
NZ_CP007188.1\|WP_002851523.1\|1610532_1611138_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	5.24929e-70
NZ_CP007188.1\|WP_002851264.1\|1593549_1594191_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57
NZ_CP007188.1\|WP_002857949.1\|1600989_1601211_+\|MoaD/ThiS-family-protein	gnl\|CDD\|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	2.76562e-11

>NZ_CP007188.1|WP_002858151.1|1601661_1602852_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENIRIENNTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTRLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILVTTGGVSMGDFDFLKKAIKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYTREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNIEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDIIFMP
>NZ_CP007188.1|WP_002781229.1|1601211_1601658_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFSKDKNCGALLTFCGIVREEGGIEALSFDIYESLLKKWFDEWQKRVDFDGISLLFAHSIGDVAIHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NZ_CP007188.1|WP_002857949.1|1600989_1601211_+|MoaD/ThiS-family-protein
MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFNENTKLKDGDKIALLPPVCGG
>NZ_CP007188.1|WP_002858205.1|1599446_1600988_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEESNTLFLANINLKKEKLELPKNLKIFKPLEEPKEFKEIIMSEDHMQMHGMMGKSENELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRAFRDTINVRPNEELRLKMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_CP007188.1|WP_002858431.1|1598174_1599323_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCEESAGALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLNAKNELQMIREFSYKDYSLRN
>NZ_CP007188.1|WP_002851502.1|1597157_1597871_-|hypothetical-protein
MGALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NZ_CP007188.1|WP_002851537.1|1596991_1597183_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NZ_CP007188.1|WP_010891941.1|1594187_1596992_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAYYIRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTVEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_CP007188.1|WP_002851264.1|1593549_1594191_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_CP007188.1|WP_002851174.1|1592620_1593553_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGEVFGGGVFVRVCKNLHAFATILFIISIIPMFLCWIKRMLPASYDIRWMMIVGGYLSKIKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NZ_CP007188.1|WP_002797817.1|1603547_1603979_-|CRISPR-associated-endonuclease-Cas2
MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQINKKQEKYHQQNLFEF
>NZ_CP007188.1|WP_002797819.1|1603971_1604862_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQISISSALFNAFAKYKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFILKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGTSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_CP007188.1|WP_052834735.1|1604858_1607813_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKVENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQSVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLNNLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGEHNLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDAELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNKTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNYKDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSTKDRDNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK
>NZ_CP007188.1|WP_002851320.1|1609482_1610472_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNTFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALSSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKILENSDAFIIGEICINEGIVLE
>NZ_CP007188.1|WP_002851523.1|1610532_1611138_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENALELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGNM
>NZ_CP007188.1|WP_002851173.1|1611134_1611884_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFAYKNEELFFEGKVKYCFEANYNFF
>NZ_CP007188.1|WP_002851407.1|1611858_1612590_+|mannosyl-glycoprotein-endo-beta-N-acetylglucosamidase
MKPIIIFFSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_CP007188.1|WP_002851155.1|1612586_1613624_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINIPIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFEVISFDKFSLGF
>NZ_CP007188.1|WP_002851546.1|1613688_1614138_-|DNA-starvation/stationary-phase-protection-protein
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM
>NZ_CP007188.1|WP_002855462.1|1614267_1615488_-|glucose-6-phosphate-isomerase
MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNLIDESLQFIQDKEYVKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFNKTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLHQEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKKDEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIALIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELLNAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPGVEVGKLILKNILNS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP007188_1	1.1\|168818\|52\|NZ_CP007188\|CRISPRCasFinder	168818-168869	52	NZ_CP007188.1	1758690-1758741	1.0
NZ_CP007188_2	2.1\|297694\|52\|NZ_CP007188\|CRISPRCasFinder	297694-297745	52	NZ_CP007188.1	1758690-1758741	1.0
NZ_CP007188_3	3.1\|1377934\|52\|NZ_CP007188\|CRISPRCasFinder	1377934-1377985	52	NZ_CP007188.1	1758690-1758741	1.0

1. spacer 1.1|168818|52|NZ_CP007188|CRISPRCasFinder matches to position: 1758690-1758741, mismatch: 0, identity: 1.0

tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	CRISPR spacer
tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	Protospacer
****************************************************

2. spacer 2.1|297694|52|NZ_CP007188|CRISPRCasFinder matches to position: 1758690-1758741, mismatch: 0, identity: 1.0

tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	CRISPR spacer
tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	Protospacer
****************************************************

3. spacer 3.1|1377934|52|NZ_CP007188|CRISPRCasFinder matches to position: 1758690-1758741, mismatch: 0, identity: 1.0

tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	CRISPR spacer
tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	Protospacer
****************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007188_5	5.1\|1603008\|30\|NZ_CP007188\|CRT	1603008-1603037	30	MN530981	Campylobacter phage DA10, complete genome	5259-5288	0	1.0
NZ_CP007188_5	5.2\|1603074\|30\|NZ_CP007188\|CRT	1603074-1603103	30	NZ_CP007184	Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence	3205-3234	0	1.0
NZ_CP007188_5	5.3\|1603140\|30\|NZ_CP007188\|CRT	1603140-1603169	30	MN530981	Campylobacter phage DA10, complete genome	30556-30585	0	1.0
NZ_CP007188_5	5.5\|1603272\|30\|NZ_CP007188\|CRT	1603272-1603301	30	MN530981	Campylobacter phage DA10, complete genome	33283-33312	0	1.0
NZ_CP007188_5	5.7\|1603009\|30\|NZ_CP007188\|PILER-CR	1603009-1603038	30	MN530981	Campylobacter phage DA10, complete genome	5259-5288	0	1.0
NZ_CP007188_5	5.8\|1603075\|30\|NZ_CP007188\|PILER-CR	1603075-1603104	30	NZ_CP007184	Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence	3205-3234	0	1.0
NZ_CP007188_5	5.9\|1603141\|30\|NZ_CP007188\|PILER-CR	1603141-1603170	30	MN530981	Campylobacter phage DA10, complete genome	30556-30585	0	1.0
NZ_CP007188_5	5.11\|1603273\|30\|NZ_CP007188\|PILER-CR	1603273-1603302	30	MN530981	Campylobacter phage DA10, complete genome	33283-33312	0	1.0
NZ_CP007188_5	5.2\|1603074\|30\|NZ_CP007188\|CRT	1603074-1603103	30	NZ_CP028373	Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence	13581-13610	1	0.967
NZ_CP007188_5	5.2\|1603074\|30\|NZ_CP007188\|CRT	1603074-1603103	30	CP047483	Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence	14073-14102	1	0.967
NZ_CP007188_5	5.2\|1603074\|30\|NZ_CP007188\|CRT	1603074-1603103	30	CP013734	Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence	13919-13948	1	0.967
NZ_CP007188_5	5.8\|1603075\|30\|NZ_CP007188\|PILER-CR	1603075-1603104	30	NZ_CP028373	Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence	13581-13610	1	0.967
NZ_CP007188_5	5.8\|1603075\|30\|NZ_CP007188\|PILER-CR	1603075-1603104	30	CP047483	Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence	14073-14102	1	0.967
NZ_CP007188_5	5.8\|1603075\|30\|NZ_CP007188\|PILER-CR	1603075-1603104	30	CP013734	Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence	13919-13948	1	0.967
NZ_CP007188_5	5.13\|1603008\|31\|NZ_CP007188\|CRISPRCasFinder	1603008-1603038	31	MN530981	Campylobacter phage DA10, complete genome	5258-5288	1	0.968
NZ_CP007188_5	5.14\|1603074\|31\|NZ_CP007188\|CRISPRCasFinder	1603074-1603104	31	NZ_CP007184	Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence	3204-3234	1	0.968
NZ_CP007188_5	5.15\|1603140\|31\|NZ_CP007188\|CRISPRCasFinder	1603140-1603170	31	MN530981	Campylobacter phage DA10, complete genome	30555-30585	1	0.968
NZ_CP007188_5	5.17\|1603272\|31\|NZ_CP007188\|CRISPRCasFinder	1603272-1603302	31	MN530981	Campylobacter phage DA10, complete genome	33283-33313	1	0.968
NZ_CP007188_5	5.3\|1603140\|30\|NZ_CP007188\|CRT	1603140-1603169	30	KX229736	Campylobacter phage PC5, complete genome	24059-24088	2	0.933
NZ_CP007188_5	5.9\|1603141\|30\|NZ_CP007188\|PILER-CR	1603141-1603170	30	KX229736	Campylobacter phage PC5, complete genome	24059-24088	2	0.933
NZ_CP007188_5	5.14\|1603074\|31\|NZ_CP007188\|CRISPRCasFinder	1603074-1603104	31	NZ_CP028373	Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence	13581-13611	2	0.935
NZ_CP007188_5	5.14\|1603074\|31\|NZ_CP007188\|CRISPRCasFinder	1603074-1603104	31	CP047483	Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence	14072-14102	2	0.935
NZ_CP007188_5	5.14\|1603074\|31\|NZ_CP007188\|CRISPRCasFinder	1603074-1603104	31	CP013734	Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence	13919-13949	2	0.935
NZ_CP007188_5	5.15\|1603140\|31\|NZ_CP007188\|CRISPRCasFinder	1603140-1603170	31	KX229736	Campylobacter phage PC5, complete genome	24059-24089	3	0.903
NZ_CP007188_5	5.2\|1603074\|30\|NZ_CP007188\|CRT	1603074-1603103	30	NC_015251	Aeromonas phage 65, complete genome	88860-88889	4	0.867
NZ_CP007188_5	5.4\|1603206\|30\|NZ_CP007188\|CRT	1603206-1603235	30	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	837-866	4	0.867
NZ_CP007188_5	5.8\|1603075\|30\|NZ_CP007188\|PILER-CR	1603075-1603104	30	NC_015251	Aeromonas phage 65, complete genome	88860-88889	4	0.867
NZ_CP007188_5	5.10\|1603207\|30\|NZ_CP007188\|PILER-CR	1603207-1603236	30	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	837-866	4	0.867
NZ_CP007188_5	5.14\|1603074\|31\|NZ_CP007188\|CRISPRCasFinder	1603074-1603104	31	NC_015251	Aeromonas phage 65, complete genome	88859-88889	4	0.871
NZ_CP007188_5	5.16\|1603206\|31\|NZ_CP007188\|CRISPRCasFinder	1603206-1603236	31	NZ_MF547664	Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence	836-866	5	0.839
NZ_CP007188_5	5.6\|1603338\|30\|NZ_CP007188\|CRT	1603338-1603367	30	JX560521	Acinetobacter phage phiAC-1, complete genome	6842-6871	6	0.8
NZ_CP007188_5	5.12\|1603339\|30\|NZ_CP007188\|PILER-CR	1603339-1603368	30	JX560521	Acinetobacter phage phiAC-1, complete genome	6842-6871	6	0.8
NZ_CP007188_5	5.18\|1603338\|31\|NZ_CP007188\|CRISPRCasFinder	1603338-1603368	31	JX560521	Acinetobacter phage phiAC-1, complete genome	6842-6872	7	0.774
NZ_CP007188_5	5.1\|1603008\|30\|NZ_CP007188\|CRT	1603008-1603037	30	MG676225	Aeromonas phage AhSzw-1, complete genome	109812-109841	8	0.733
NZ_CP007188_5	5.4\|1603206\|30\|NZ_CP007188\|CRT	1603206-1603235	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	562145-562174	8	0.733
NZ_CP007188_5	5.5\|1603272\|30\|NZ_CP007188\|CRT	1603272-1603301	30	MG602477	Bacillus phage BCP01, complete genome	154164-154193	8	0.733
NZ_CP007188_5	5.5\|1603272\|30\|NZ_CP007188\|CRT	1603272-1603301	30	KX495186	Bacillus phage PK16, complete genome	23957-23986	8	0.733
NZ_CP007188_5	5.7\|1603009\|30\|NZ_CP007188\|PILER-CR	1603009-1603038	30	MG676225	Aeromonas phage AhSzw-1, complete genome	109812-109841	8	0.733
NZ_CP007188_5	5.10\|1603207\|30\|NZ_CP007188\|PILER-CR	1603207-1603236	30	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	562145-562174	8	0.733
NZ_CP007188_5	5.11\|1603273\|30\|NZ_CP007188\|PILER-CR	1603273-1603302	30	MG602477	Bacillus phage BCP01, complete genome	154164-154193	8	0.733
NZ_CP007188_5	5.11\|1603273\|30\|NZ_CP007188\|PILER-CR	1603273-1603302	30	KX495186	Bacillus phage PK16, complete genome	23957-23986	8	0.733
NZ_CP007188_5	5.16\|1603206\|31\|NZ_CP007188\|CRISPRCasFinder	1603206-1603236	31	NC_047886	Pectobacterium phage DU_PP_II, complete genome	17661-17691	8	0.742
NZ_CP007188_5	5.17\|1603272\|31\|NZ_CP007188\|CRISPRCasFinder	1603272-1603302	31	KX495186	Bacillus phage PK16, complete genome	23956-23986	8	0.742
NZ_CP007188_5	5.17\|1603272\|31\|NZ_CP007188\|CRISPRCasFinder	1603272-1603302	31	MG602477	Bacillus phage BCP01, complete genome	154164-154194	8	0.742
NZ_CP007188_5	5.16\|1603206\|31\|NZ_CP007188\|CRISPRCasFinder	1603206-1603236	31	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	562145-562175	9	0.71
NZ_CP007188_4	4.1\|1487265\|34\|NZ_CP007188\|CRISPRCasFinder	1487265-1487298	34	MH752385	Bacillus phage Ray17, complete genome	8509-8542	10	0.706

1. spacer 5.1|1603008|30|NZ_CP007188|CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

tatggcagtttttaaaagagcttggcggtt	CRISPR spacer
tatggcagtttttaaaagagcttggcggtt	Protospacer
******************************

2. spacer 5.2|1603074|30|NZ_CP007188|CRT matches to NZ_CP007184 (Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence) position: , mismatch: 0, identity: 1.0

aaactaatgtgtggatttttgtttaatgct	CRISPR spacer
aaactaatgtgtggatttttgtttaatgct	Protospacer
******************************

3. spacer 5.3|1603140|30|NZ_CP007188|CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

ctacaagaatgaggatgatgatattttaca	CRISPR spacer
ctacaagaatgaggatgatgatattttaca	Protospacer
******************************

4. spacer 5.5|1603272|30|NZ_CP007188|CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

tttccaaagtttcattagttgaatttaact	CRISPR spacer
tttccaaagtttcattagttgaatttaact	Protospacer
******************************

5. spacer 5.7|1603009|30|NZ_CP007188|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

tatggcagtttttaaaagagcttggcggtt	CRISPR spacer
tatggcagtttttaaaagagcttggcggtt	Protospacer
******************************

6. spacer 5.8|1603075|30|NZ_CP007188|PILER-CR matches to NZ_CP007184 (Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence) position: , mismatch: 0, identity: 1.0

aaactaatgtgtggatttttgtttaatgct	CRISPR spacer
aaactaatgtgtggatttttgtttaatgct	Protospacer
******************************

7. spacer 5.9|1603141|30|NZ_CP007188|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

ctacaagaatgaggatgatgatattttaca	CRISPR spacer
ctacaagaatgaggatgatgatattttaca	Protospacer
******************************

8. spacer 5.11|1603273|30|NZ_CP007188|PILER-CR matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 0, identity: 1.0

tttccaaagtttcattagttgaatttaact	CRISPR spacer
tttccaaagtttcattagttgaatttaact	Protospacer
******************************

9. spacer 5.2|1603074|30|NZ_CP007188|CRT matches to NZ_CP028373 (Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.967

aaactaatgtgtggatttttgtttaatgct	CRISPR spacer
aaactaatgtgtggatttttgtttaatgcc	Protospacer
*****************************.

10. spacer 5.2|1603074|30|NZ_CP007188|CRT matches to CP047483 (Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence) position: , mismatch: 1, identity: 0.967

aaactaatgtgtggatttttgtttaatgct	CRISPR spacer
aaactaatgtgtggatttttgtttaatgcc	Protospacer
*****************************.

11. spacer 5.2|1603074|30|NZ_CP007188|CRT matches to CP013734 (Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence) position: , mismatch: 1, identity: 0.967

aaactaatgtgtggatttttgtttaatgct	CRISPR spacer
aaactaatgtgtggatttttatttaatgct	Protospacer
********************.*********

12. spacer 5.8|1603075|30|NZ_CP007188|PILER-CR matches to NZ_CP028373 (Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.967

aaactaatgtgtggatttttgtttaatgct	CRISPR spacer
aaactaatgtgtggatttttgtttaatgcc	Protospacer
*****************************.

13. spacer 5.8|1603075|30|NZ_CP007188|PILER-CR matches to CP047483 (Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence) position: , mismatch: 1, identity: 0.967

aaactaatgtgtggatttttgtttaatgct	CRISPR spacer
aaactaatgtgtggatttttgtttaatgcc	Protospacer
*****************************.

14. spacer 5.8|1603075|30|NZ_CP007188|PILER-CR matches to CP013734 (Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence) position: , mismatch: 1, identity: 0.967

aaactaatgtgtggatttttgtttaatgct	CRISPR spacer
aaactaatgtgtggatttttatttaatgct	Protospacer
********************.*********

15. spacer 5.13|1603008|31|NZ_CP007188|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.968

tatggcagtttttaaaagagcttggcggttg	CRISPR spacer
tatggcagtttttaaaagagcttggcggtta	Protospacer
******************************.

16. spacer 5.14|1603074|31|NZ_CP007188|CRISPRCasFinder matches to NZ_CP007184 (Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence) position: , mismatch: 1, identity: 0.968

aaactaatgtgtggatttttgtttaatgctg	CRISPR spacer
aaactaatgtgtggatttttgtttaatgcta	Protospacer
******************************.

17. spacer 5.15|1603140|31|NZ_CP007188|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.968

ctacaagaatgaggatgatgatattttacag	CRISPR spacer
ctacaagaatgaggatgatgatattttacaa	Protospacer
******************************.

18. spacer 5.17|1603272|31|NZ_CP007188|CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.968

tttccaaagtttcattagttgaatttaactg	CRISPR spacer
tttccaaagtttcattagttgaatttaactt	Protospacer
******************************

19. spacer 5.3|1603140|30|NZ_CP007188|CRT matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 2, identity: 0.933

ctacaagaatgaggatgatgatattttaca	CRISPR spacer
ctacaagaatgaaaatgatgatattttaca	Protospacer
************..****************

20. spacer 5.9|1603141|30|NZ_CP007188|PILER-CR matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 2, identity: 0.933

ctacaagaatgaggatgatgatattttaca	CRISPR spacer
ctacaagaatgaaaatgatgatattttaca	Protospacer
************..****************

21. spacer 5.14|1603074|31|NZ_CP007188|CRISPRCasFinder matches to NZ_CP028373 (Campylobacter jejuni subsp. jejuni strain huA17 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.935

aaactaatgtgtggatttttgtttaatgctg	CRISPR spacer
aaactaatgtgtggatttttgtttaatgcca	Protospacer
*****************************..

22. spacer 5.14|1603074|31|NZ_CP007188|CRISPRCasFinder matches to CP047483 (Campylobacter jejuni strain CFSAN096297 plasmid CFSAN096297, complete sequence) position: , mismatch: 2, identity: 0.935

aaactaatgtgtggatttttgtttaatgctg	CRISPR spacer
aaactaatgtgtggatttttgtttaatgcca	Protospacer
*****************************..

23. spacer 5.14|1603074|31|NZ_CP007188|CRISPRCasFinder matches to CP013734 (Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence) position: , mismatch: 2, identity: 0.935

aaactaatgtgtggatttttgtttaatgctg	CRISPR spacer
aaactaatgtgtggatttttatttaatgcta	Protospacer
********************.*********.

24. spacer 5.15|1603140|31|NZ_CP007188|CRISPRCasFinder matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 3, identity: 0.903

ctacaagaatgaggatgatgatattttacag	CRISPR spacer
ctacaagaatgaaaatgatgatattttacaa	Protospacer
************..****************.

25. spacer 5.2|1603074|30|NZ_CP007188|CRT matches to NC_015251 (Aeromonas phage 65, complete genome) position: , mismatch: 4, identity: 0.867

aaactaatg--tgtggatttttgtttaatgct	CRISPR spacer
--attaatggatgtggatttttgtttactgct	Protospacer
  *.*****  **************** ****

26. spacer 5.4|1603206|30|NZ_CP007188|CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 4, identity: 0.867

tccattc-tcataaaatatttagccattatt	CRISPR spacer
-ctattcatcataaaatttttagccattata	Protospacer
 *.**** ********* ************

27. spacer 5.8|1603075|30|NZ_CP007188|PILER-CR matches to NC_015251 (Aeromonas phage 65, complete genome) position: , mismatch: 4, identity: 0.867

aaactaatg--tgtggatttttgtttaatgct	CRISPR spacer
--attaatggatgtggatttttgtttactgct	Protospacer
  *.*****  **************** ****

28. spacer 5.10|1603207|30|NZ_CP007188|PILER-CR matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 4, identity: 0.867

tccattc-tcataaaatatttagccattatt	CRISPR spacer
-ctattcatcataaaatttttagccattata	Protospacer
 *.**** ********* ************

29. spacer 5.14|1603074|31|NZ_CP007188|CRISPRCasFinder matches to NC_015251 (Aeromonas phage 65, complete genome) position: , mismatch: 4, identity: 0.871

aaactaatg--tgtggatttttgtttaatgctg	CRISPR spacer
--attaatggatgtggatttttgtttactgctg	Protospacer
  *.*****  **************** *****

30. spacer 5.16|1603206|31|NZ_CP007188|CRISPRCasFinder matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 5, identity: 0.839

tccattc-tcataaaatatttagccattattg	CRISPR spacer
-ctattcatcataaaatttttagccattataa	Protospacer
 *.**** ********* ************ .

31. spacer 5.6|1603338|30|NZ_CP007188|CRT matches to JX560521 (Acinetobacter phage phiAC-1, complete genome) position: , mismatch: 6, identity: 0.8

ttttgttgagtgggttatgagccaaaagaa	CRISPR spacer
ttttgtggagtgggttatgagcaaactaga	Protospacer
****** *************** **  ..*

32. spacer 5.12|1603339|30|NZ_CP007188|PILER-CR matches to JX560521 (Acinetobacter phage phiAC-1, complete genome) position: , mismatch: 6, identity: 0.8

ttttgttgagtgggttatgagccaaaagaa	CRISPR spacer
ttttgtggagtgggttatgagcaaactaga	Protospacer
****** *************** **  ..*

33. spacer 5.18|1603338|31|NZ_CP007188|CRISPRCasFinder matches to JX560521 (Acinetobacter phage phiAC-1, complete genome) position: , mismatch: 7, identity: 0.774

ttttgttgagtgggttatgagccaaaagaag	CRISPR spacer
ttttgtggagtgggttatgagcaaactagaa	Protospacer
****** *************** **  ..*.

34. spacer 5.1|1603008|30|NZ_CP007188|CRT matches to MG676225 (Aeromonas phage AhSzw-1, complete genome) position: , mismatch: 8, identity: 0.733

tatggcagtttttaaaagagcttggcggtt	CRISPR spacer
gctgccagtttttaaaagagctttacaatg	Protospacer
  ** ****************** .*..*

35. spacer 5.4|1603206|30|NZ_CP007188|CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.733

tccattctcataaaatatttagccattatt	CRISPR spacer
ggaactctcataaaatatttatccaataac	Protospacer
   *.**************** *** ** .

36. spacer 5.5|1603272|30|NZ_CP007188|CRT matches to MG602477 (Bacillus phage BCP01, complete genome) position: , mismatch: 8, identity: 0.733

tttccaaagtttcattagttgaatttaact	CRISPR spacer
ataataaagtttcattagaagaatttaaaa	Protospacer
 *  .*************  ********

37. spacer 5.5|1603272|30|NZ_CP007188|CRT matches to KX495186 (Bacillus phage PK16, complete genome) position: , mismatch: 8, identity: 0.733

tttccaaagtttcattagttgaatttaact	CRISPR spacer
ataataaagtttcattagaagaatttaaaa	Protospacer
 *  .*************  ********

38. spacer 5.7|1603009|30|NZ_CP007188|PILER-CR matches to MG676225 (Aeromonas phage AhSzw-1, complete genome) position: , mismatch: 8, identity: 0.733

tatggcagtttttaaaagagcttggcggtt	CRISPR spacer
gctgccagtttttaaaagagctttacaatg	Protospacer
  ** ****************** .*..*

39. spacer 5.10|1603207|30|NZ_CP007188|PILER-CR matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.733

tccattctcataaaatatttagccattatt	CRISPR spacer
ggaactctcataaaatatttatccaataac	Protospacer
   *.**************** *** ** .

40. spacer 5.11|1603273|30|NZ_CP007188|PILER-CR matches to MG602477 (Bacillus phage BCP01, complete genome) position: , mismatch: 8, identity: 0.733

tttccaaagtttcattagttgaatttaact	CRISPR spacer
ataataaagtttcattagaagaatttaaaa	Protospacer
 *  .*************  ********

41. spacer 5.11|1603273|30|NZ_CP007188|PILER-CR matches to KX495186 (Bacillus phage PK16, complete genome) position: , mismatch: 8, identity: 0.733

tttccaaagtttcattagttgaatttaact	CRISPR spacer
ataataaagtttcattagaagaatttaaaa	Protospacer
 *  .*************  ********

42. spacer 5.16|1603206|31|NZ_CP007188|CRISPRCasFinder matches to NC_047886 (Pectobacterium phage DU_PP_II, complete genome) position: , mismatch: 8, identity: 0.742

tccattctcataaaatatttagccattattg	CRISPR spacer
ggattacccataaaatctttaaccattattg	Protospacer
    * *.******** ****.*********

43. spacer 5.17|1603272|31|NZ_CP007188|CRISPRCasFinder matches to KX495186 (Bacillus phage PK16, complete genome) position: , mismatch: 8, identity: 0.742

tttccaaagtttcattagttgaatttaactg	CRISPR spacer
ataataaagtttcattagaagaatttaaaag	Protospacer
 *  .*************  ********  *

44. spacer 5.17|1603272|31|NZ_CP007188|CRISPRCasFinder matches to MG602477 (Bacillus phage BCP01, complete genome) position: , mismatch: 8, identity: 0.742

tttccaaagtttcattagttgaatttaactg	CRISPR spacer
ataataaagtttcattagaagaatttaaaag	Protospacer
 *  .*************  ********  *

45. spacer 5.16|1603206|31|NZ_CP007188|CRISPRCasFinder matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 9, identity: 0.71

tccattctcataaaatatttagccattattg	CRISPR spacer
ggaactctcataaaatatttatccaataaca	Protospacer
   *.**************** *** ** ..

46. spacer 4.1|1487265|34|NZ_CP007188|CRISPRCasFinder matches to MH752385 (Bacillus phage Ray17, complete genome) position: , mismatch: 10, identity: 0.706

ttttttagctttatactcagccttactcatataa	CRISPR spacer
cttacaagctttatactcagccttattgatcgtt	Protospacer
.** . *******************.* **

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

106820 : 198566

118

Campylobacter_phage(42.86%)

integrase,tRNA,head,terminase,plate,transposase,tail

attL 99920:99938|attR 190603:190621

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
99920:99938	attL	NA	NA	NA	NA
WP_002851657.1\|106820_107738_+\|tRNA	methionyl-tRNA formyltransferase	M4QRX9	Synechococcus_phage	3.4e-05	25.6
WP_002858812.1\|107700_108354_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_002851697.1\|108350_109136_+	ParA family protein	H7BUL8	unidentified_phage	8.8e-18	32.5
WP_002851919.1\|109141_109978_+	ParB/RepB/Spo0J family partition protein	S5VSZ7	Leptospira_phage	2.8e-14	30.3
WP_002851812.1\|110038_110464_+	F0F1 ATP synthase subunit B'	NA	NA	NA	NA
WP_002851681.1\|110474_110987_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_002851861.1\|110989_111511_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_002851836.1\|111524_113030_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_002851834.1\|113038_113923_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_002852005.1\|113948_115346_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_002851752.1\|115349_115739_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_002854361.1\|115738_116293_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_002858790.1\|116301_116691_+	ExbD/TolR family protein	NA	NA	NA	NA
WP_002859784.1\|116693_117473_+	hypothetical protein	NA	NA	NA	NA
WP_002858647.1\|117482_118691_+	Tol-Pal system protein TolB	NA	NA	NA	NA
WP_002851617.1\|118767_119265_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
WP_002851738.1\|119268_120216_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_052854221.1\|120230_120782_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_052834664.1\|120781_121702_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_002860591.1\|121698_122388_+	aminodeoxyfutalosine nucleosidase	NA	NA	NA	NA
WP_032583936.1\|122384_123140_+\|tRNA	tRNA 2-thiocytidine biosynthesis protein TtcA	A0A0U2S5Z2	Escherichia_phage	3.1e-28	32.5
WP_002785057.1\|123144_123666_+	cysteine hydrolase family protein	NA	NA	NA	NA
WP_002854216.1\|123665_124280_+	recombination protein RecO	NA	NA	NA	NA
WP_002851664.1\|124276_124684_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_002851870.1\|124807_125497_+	hypothetical protein	NA	NA	NA	NA
WP_002860593.1\|125521_126448_-\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA
WP_002860594.1\|126444_127431_-	hypothetical protein	NA	NA	NA	NA
WP_002851949.1\|127420_127783_-	molecular chaperone DnaK suppressor DksA	NA	NA	NA	NA
WP_002860596.1\|127794_128256_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_002860597.1\|128245_129088_-	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA
WP_002859348.1\|129096_129819_-	inositol monophosphatase	NA	NA	NA	NA
WP_002890261.1\|129818_132038_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_002851653.1\|132114_132942_+	prephenate dehydrogenase	NA	NA	NA	NA
WP_052834665.1\|133021_134395_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_002869857.1\|134394_135279_+	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA
WP_002851789.1\|135317_135719_+\|tRNA	tRNA threonylcarbamoyladenosine biosynthesis protein TsaB	NA	NA	NA	NA
WP_002851909.1\|135727_136606_+	homoserine kinase	NA	NA	NA	NA
WP_002859353.1\|136630_136888_+	YlxR family protein	NA	NA	NA	NA
WP_002868393.1\|136874_139490_+	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	1.7e-28	27.9
WP_002778650.1\|139486_139849_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_002800873.1\|139838_140261_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_075912919.1\|140365_142354_+	AAA domain-containing protein	K4I1H4	Acidithiobacillus_phage	1.9e-29	41.4
WP_075912921.1\|143730_145419_+	AAA family ATPase	X2KLG0	Campylobacter_phage	1.2e-88	37.9
WP_032582421.1\|145498_146128_+	LexA family transcriptional regulator	A7YGK7	Campylobacter_phage	2.6e-60	100.0
WP_002865000.1\|146208_146529_+	hypothetical protein	A7YGI4	Campylobacter_phage	1.3e-52	100.0
WP_002875224.1\|146538_146733_+	hypothetical protein	A7YG72	Campylobacter_phage	5.1e-28	98.4
WP_075912922.1\|146812_147100_+	hypothetical protein	A7YGI8	Campylobacter_phage	1.9e-47	98.9
WP_052790176.1\|147129_147945_-	DNA adenine methylase	A7YGW6	Campylobacter_phage	8.2e-152	100.0
WP_002875578.1\|148049_148538_-	virion morphogenesis protein	A7YG96	Campylobacter_phage	1.6e-89	100.0
WP_075912924.1\|148541_150764_-\|tail	phage tail tape measure protein	A7YG97	Campylobacter_phage	0.0e+00	99.7
WP_002784655.1\|150805_151111_+	hypothetical protein	A7YG98	Campylobacter_phage	4.7e-36	100.0
WP_002843342.1\|151222_151462_-\|tail	phage tail assembly protein	A7YGZ3	Campylobacter_phage	3.2e-11	62.5
WP_002865376.1\|151614_152124_-\|tail	tail protein	A7YG76	Campylobacter_phage	3.3e-90	100.0
WP_052835012.1\|152150_153344_-\|tail	phage tail protein	A7YGA3	Campylobacter_phage	5.0e-198	100.0
WP_002922154.1\|153362_154370_-	hypothetical protein	A7YGT6	Campylobacter_phage	7.7e-192	100.0
WP_042963349.1\|154493_154865_-	DUF1353 domain-containing protein	A7YGF6	Campylobacter_phage	1.7e-67	99.2
WP_002924980.1\|154861_155368_-	DUF4376 domain-containing protein	A7YGA6	Campylobacter_phage	5.7e-87	99.4
WP_042963348.1\|155392_156358_-\|tail	phage tail protein	A7YG81	Campylobacter_phage	2.7e-117	83.9
WP_043012798.1\|156357_156978_-\|tail	phage tail protein I	A7YGM6	Campylobacter_phage	2.8e-59	97.4
WP_032584246.1\|156974_158141_-\|plate	baseplate assembly protein	Q8H9N3	Vibrio_phage	3.9e-14	24.6
WP_002795239.1\|158137_158428_-\|plate	baseplate assembly protein	Q8H9N4	Vibrio_phage	2.7e-09	40.8
WP_002795238.1\|158424_158616_-	hypothetical protein	NA	NA	NA	NA
WP_002876443.1\|158624_159257_-\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	1.7e-08	34.6
WP_002865847.1\|159253_159718_-	DUF1804 family protein	NA	NA	NA	NA
WP_002790001.1\|159848_160889_+	hypothetical protein	NA	NA	NA	NA
WP_052823261.1\|160888_161776_+\|head	head protein	A0A2K9VH18	Faecalibacterium_phage	3.5e-63	43.7
WP_014517220.1\|161775_162087_+	hypothetical protein	NA	NA	NA	NA
WP_002790896.1\|162083_162437_+	hypothetical protein	NA	NA	NA	NA
WP_002790266.1\|162433_162799_+	hypothetical protein	NA	NA	NA	NA
WP_075912925.1\|162788_163178_+	DUF882 domain-containing protein	A0A1X9Q0V8	Human_gokushovirus	9.4e-21	45.9
WP_002827119.1\|163188_163530_+	hypothetical protein	NA	NA	NA	NA
WP_002784496.1\|163526_163775_+	hypothetical protein	NA	NA	NA	NA
WP_002790261.1\|163886_164201_+	hypothetical protein	NA	NA	NA	NA
WP_002865465.1\|164290_165817_+\|terminase	phage terminase large subunit	A0A0M3LQB7	Mannheimia_phage	6.4e-49	31.1
WP_044261469.1\|165813_167196_+	DUF935 family protein	A0A0M3LRU4	Mannheimia_phage	3.7e-11	22.7
WP_002870187.1\|167188_168322_+	hypothetical protein	A0A1C6ZDL9	Pseudomonas_phage	5.1e-27	34.2
WP_044261472.1\|168460_168940_-	hypothetical protein	A7YGZ0	Campylobacter_phage	3.0e-05	28.8
WP_002790256.1\|168926_169118_-	hypothetical protein	NA	NA	NA	NA
WP_052834784.1\|169169_169598_-	hypothetical protein	NA	NA	NA	NA
WP_002864977.1\|169594_169774_-	hypothetical protein	NA	NA	NA	NA
WP_002791413.1\|169888_170275_-	hypothetical protein	D5GVQ0	Campylobacter_virus	2.7e-36	56.4
WP_002791414.1\|170271_170544_-	hypothetical protein	NA	NA	NA	NA
WP_043012819.1\|170607_170787_-	hypothetical protein	NA	NA	NA	NA
WP_002806832.1\|170783_171269_-	host-nuclease inhibitor protein Gam	A0A2K9VGT9	Faecalibacterium_phage	3.2e-18	34.0
WP_002791419.1\|171375_171717_-	hypothetical protein	NA	NA	NA	NA
WP_002824157.1\|171850_172036_-	hypothetical protein	NA	NA	NA	NA
WP_002795448.1\|172032_172224_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_002806833.1\|172226_173150_-	AAA family ATPase	A0A2H4JAW1	uncultured_Caudovirales_phage	3.9e-09	24.5
WP_075912926.1\|173220_175296_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_002793921.1\|175292_175493_-	hypothetical protein	NA	NA	NA	NA
WP_002793922.1\|175635_176259_+	LexA family transcriptional regulator	Q8HAA0	Salmonella_phage	1.0e-08	34.1
WP_002793925.1\|176260_176938_+	hypothetical protein	NA	NA	NA	NA
WP_075912980.1\|177039_177438_+	restriction endonuclease	NA	NA	NA	NA
WP_052775334.1\|177426_178230_-	metal ABC transporter permease	NA	NA	NA	NA
WP_002867806.1\|178222_179077_-	metal ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-13	36.1
WP_002858739.1\|179089_179980_-	zinc ABC transporter solute-binding protein	NA	NA	NA	NA
WP_075912927.1\|180200_182219_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-12	78.2
WP_052834748.1\|182353_184135_+	PhoX family phosphatase	NA	NA	NA	NA
WP_002851648.1\|184172_185111_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	6.1e-58	41.0
WP_002851800.1\|185244_185559_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	3.4e-21	47.8
WP_002851874.1\|185615_185954_-	YraN family protein	NA	NA	NA	NA
WP_002851705.1\|185953_187201_-	homoserine dehydrogenase	NA	NA	NA	NA
WP_002851675.1\|187204_188407_-	LL-diaminopimelate aminotransferase	NA	NA	NA	NA
WP_002851994.1\|188418_189225_-	hypothetical protein	NA	NA	NA	NA
WP_002851924.1\|189218_190157_-	membrane protein	NA	NA	NA	NA
WP_002851944.1\|190149_190833_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
190603:190621	attR	NA	NA	NA	NA
WP_002851893.1\|190846_191671_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.0e-32	35.3
WP_002851603.1\|191673_191874_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_002851903.1\|191952_192609_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_002851635.1\|192610_193018_-	membrane protein	NA	NA	NA	NA
WP_052834747.1\|193017_193443_-	cytochrome c	NA	NA	NA	NA
WP_002851757.1\|193442_194024_-	6-carboxytetrahydropterin synthase	NA	NA	NA	NA
WP_002851883.1\|194020_194764_-	7-carboxy-7-deazaguanine synthase QueE	M1PXL8	Cellulophaga_phage	1.3e-23	34.4
WP_002868437.1\|194766_195729_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_002851715.1\|195741_196257_-	hypothetical protein	NA	NA	NA	NA
WP_002851641.1\|196253_196751_-	hypothetical protein	NA	NA	NA	NA
WP_002851905.1\|196741_197626_-	4-hydroxybenzoate polyprenyltransferase	NA	NA	NA	NA
WP_002851982.1\|197696_198566_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA

DBSCAN-SWA_2

274374 : 318641

Campylobacter_phage(56.67%)

integrase,protease,head,terminase,plate,transposase,tail

attL 293616:293633|attR 304838:304855

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075912929.1\|274374_275004_+	LexA family transcriptional regulator	A7YGK7	Campylobacter_phage	7.4e-60	99.1
WP_002865000.1\|275084_275405_+	hypothetical protein	A7YGI4	Campylobacter_phage	1.3e-52	100.0
WP_002875224.1\|275414_275609_+	hypothetical protein	A7YG72	Campylobacter_phage	5.1e-28	98.4
WP_075912922.1\|275688_275976_+	hypothetical protein	A7YGI8	Campylobacter_phage	1.9e-47	98.9
WP_052790176.1\|276005_276821_-	DNA adenine methylase	A7YGW6	Campylobacter_phage	8.2e-152	100.0
WP_002875578.1\|276925_277414_-	virion morphogenesis protein	A7YG96	Campylobacter_phage	1.6e-89	100.0
WP_075912924.1\|277417_279640_-\|tail	phage tail tape measure protein	A7YG97	Campylobacter_phage	0.0e+00	99.7
WP_002784655.1\|279681_279987_+	hypothetical protein	A7YG98	Campylobacter_phage	4.7e-36	100.0
WP_002843342.1\|280098_280338_-\|tail	phage tail assembly protein	A7YGZ3	Campylobacter_phage	3.2e-11	62.5
WP_002865376.1\|280490_281000_-\|tail	tail protein	A7YG76	Campylobacter_phage	3.3e-90	100.0
WP_052835012.1\|281026_282220_-\|tail	phage tail protein	A7YGA3	Campylobacter_phage	5.0e-198	100.0
WP_002922154.1\|282238_283246_-	hypothetical protein	A7YGT6	Campylobacter_phage	7.7e-192	100.0
WP_042963349.1\|283369_283741_-	DUF1353 domain-containing protein	A7YGF6	Campylobacter_phage	1.7e-67	99.2
WP_002924980.1\|283737_284244_-	DUF4376 domain-containing protein	A7YGA6	Campylobacter_phage	5.7e-87	99.4
WP_042963348.1\|284268_285234_-\|tail	phage tail protein	A7YG81	Campylobacter_phage	2.7e-117	83.9
WP_043012798.1\|285233_285854_-\|tail	phage tail protein I	A7YGM6	Campylobacter_phage	2.8e-59	97.4
WP_032584246.1\|285850_287017_-\|plate	baseplate assembly protein	Q8H9N3	Vibrio_phage	3.9e-14	24.6
WP_002795239.1\|287013_287304_-\|plate	baseplate assembly protein	Q8H9N4	Vibrio_phage	2.7e-09	40.8
WP_002795238.1\|287300_287492_-	hypothetical protein	NA	NA	NA	NA
WP_002876443.1\|287500_288133_-\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	1.7e-08	34.6
WP_002865847.1\|288129_288594_-	DUF1804 family protein	NA	NA	NA	NA
WP_002790001.1\|288724_289765_+	hypothetical protein	NA	NA	NA	NA
WP_052823261.1\|289764_290652_+\|head	head protein	A0A2K9VH18	Faecalibacterium_phage	3.5e-63	43.7
WP_014517220.1\|290651_290963_+	hypothetical protein	NA	NA	NA	NA
WP_002790896.1\|290959_291313_+	hypothetical protein	NA	NA	NA	NA
WP_002790266.1\|291309_291675_+	hypothetical protein	NA	NA	NA	NA
WP_075912925.1\|291664_292054_+	DUF882 domain-containing protein	A0A1X9Q0V8	Human_gokushovirus	9.4e-21	45.9
WP_002827119.1\|292064_292406_+	hypothetical protein	NA	NA	NA	NA
WP_002784496.1\|292402_292651_+	hypothetical protein	NA	NA	NA	NA
WP_002790261.1\|292762_293077_+	hypothetical protein	NA	NA	NA	NA
WP_002865465.1\|293166_294693_+\|terminase	phage terminase large subunit	A0A0M3LQB7	Mannheimia_phage	6.4e-49	31.1
293616:293633	attL	NA	NA	NA	NA
WP_044261469.1\|294689_296072_+	DUF935 family protein	A0A0M3LRU4	Mannheimia_phage	3.7e-11	22.7
WP_002870187.1\|296064_297198_+	hypothetical protein	A0A1C6ZDL9	Pseudomonas_phage	5.1e-27	34.2
WP_044261472.1\|297336_297816_-	hypothetical protein	A7YGZ0	Campylobacter_phage	3.0e-05	28.8
WP_002790256.1\|297802_297994_-	hypothetical protein	NA	NA	NA	NA
WP_052834784.1\|298045_298474_-	hypothetical protein	NA	NA	NA	NA
WP_002864977.1\|298470_298650_-	hypothetical protein	NA	NA	NA	NA
WP_002791413.1\|298764_299151_-	hypothetical protein	D5GVQ0	Campylobacter_virus	2.7e-36	56.4
WP_002791414.1\|299147_299420_-	hypothetical protein	NA	NA	NA	NA
WP_043012819.1\|299483_299663_-	hypothetical protein	NA	NA	NA	NA
WP_075912930.1\|299659_300145_-	host-nuclease inhibitor protein Gam	A0A2K9VGT9	Faecalibacterium_phage	2.4e-18	33.3
WP_002865074.1\|300339_300678_-	hypothetical protein	NA	NA	NA	NA
WP_002795448.1\|301420_301612_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_002790751.1\|301608_302466_-	AAA family ATPase	A0A0M3LP72	Mannheimia_phage	9.6e-26	31.2
WP_075912931.1\|302554_304672_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_002865558.1\|304672_304864_-	hypothetical protein	NA	NA	NA	NA
304838:304855	attR	NA	NA	NA	NA
WP_002876361.1\|304879_305149_-	hypothetical protein	NA	NA	NA	NA
WP_044260123.1\|305247_306051_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_154021671.1\|306232_306433_-	hypothetical protein	NA	NA	NA	NA
WP_002851840.1\|306625_307501_+	zinc transporter ZupT	NA	NA	NA	NA
WP_010891848.1\|307524_310041_-	molybdopterin guanine dinucleotide-containing S/N-oxide reductase	NA	NA	NA	NA
WP_002851702.1\|310051_310627_-	cytochrome c3 family protein	NA	NA	NA	NA
WP_002864577.1\|311107_311617_-	DUF2393 domain-containing protein	NA	NA	NA	NA
WP_002858737.1\|311616_312147_-	DUF2393 domain-containing protein	NA	NA	NA	NA
WP_002858687.1\|312158_313247_-	membrane protein	L7RCW8	Acanthamoeba_polyphaga_moumouvirus	9.1e-05	23.0
WP_052834731.1\|313259_314174_-	branched-chain-amino-acid transaminase	NA	NA	NA	NA
WP_002851942.1\|314350_314557_+	4-oxalocrotonate tautomerase family protein	NA	NA	NA	NA
WP_002854561.1\|314553_315009_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_002858664.1\|315008_316100_+	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_002857452.1\|316193_316634_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_002851756.1\|316633_317425_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_010891849.1\|317387_318641_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.2e-117	54.7

DBSCAN-SWA_3

1073214 : 1165821

109

Campylobacter_phage(31.11%)

tRNA,protease,terminase,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002852939.1\|1073214_1074576_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_032598639.1\|1074576_1074684_-	hypothetical protein	NA	NA	NA	NA
WP_052834650.1\|1074677_1077431_-\|tRNA	isoleucine--tRNA ligase	A0A2P1ELB8	Moumouvirus	8.6e-68	24.7
WP_002852915.1\|1077529_1078618_+	CinA family protein	B5TK85	Pseudomonas_phage	2.7e-09	34.6
WP_002852983.1\|1078629_1079055_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002885153.1\|1079192_1079738_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_002853045.1\|1079737_1080343_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_002853053.1\|1080467_1081004_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_002852927.1\|1081000_1082107_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_002859152.1\|1082099_1082966_+	VirK family antimicrobial peptide resistance protein	NA	NA	NA	NA
WP_002853062.1\|1083052_1083430_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_002853013.1\|1083438_1083990_+	single-stranded DNA-binding protein	D5LH30	Escherichia_phage	4.9e-15	42.7
WP_002853032.1\|1084000_1084261_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_002885146.1\|1084320_1086696_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.3e-133	37.9
WP_002852961.1\|1086712_1087360_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002852982.1\|1087520_1087910_+	flagellar assembly protein FliW	NA	NA	NA	NA
WP_002858388.1\|1087909_1088641_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_002853046.1\|1088637_1088940_+	type II secretion system protein	NA	NA	NA	NA
WP_041016326.1\|1089214_1089913_-	hypothetical protein	NA	NA	NA	NA
WP_032584112.1\|1089912_1090587_-	LexA family transcriptional regulator	X2KRC9	Campylobacter_phage	9.8e-26	32.1
WP_002804142.1\|1090736_1090937_+	hypothetical protein	NA	NA	NA	NA
WP_002806833.1\|1093080_1094004_+	AAA family ATPase	A0A2H4JAW1	uncultured_Caudovirales_phage	3.9e-09	24.5
WP_002795448.1\|1094006_1094198_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_002824157.1\|1094194_1094380_+	hypothetical protein	NA	NA	NA	NA
WP_002791419.1\|1094513_1094855_+	hypothetical protein	NA	NA	NA	NA
WP_075912952.1\|1094961_1095447_+	host-nuclease inhibitor protein Gam	A0A2K9VGT9	Faecalibacterium_phage	1.6e-17	32.7
WP_052834668.1\|1095505_1096468_+	hypothetical protein	NA	NA	NA	NA
WP_002784531.1\|1096464_1096734_+	hypothetical protein	NA	NA	NA	NA
WP_002793908.1\|1096733_1097426_+	hypothetical protein	NA	NA	NA	NA
WP_002876315.1\|1097422_1097872_+	DUF1018 domain-containing protein	NA	NA	NA	NA
WP_002784526.1\|1097918_1098194_+	hypothetical protein	NA	NA	NA	NA
WP_002784523.1\|1098949_1099234_+	DNA-binding protein	NA	NA	NA	NA
WP_002852060.1\|1099230_1100208_-\|tail	tail protein	A0A219Y9Y2	Aeromonas_phage	6.2e-13	25.7
WP_002784520.1\|1100201_1100393_-\|tail	tail protein	NA	NA	NA	NA
WP_052834669.1\|1100385_1100760_-\|tail	phage tail protein	NA	NA	NA	NA
WP_052834670.1\|1100891_1102130_-	hypothetical protein	Q6QIB9	Burkholderia_phage	7.1e-30	34.7
WP_002809611.1\|1102132_1103503_-	DUF935 family protein	A0A2H4JHL1	uncultured_Caudovirales_phage	4.5e-17	26.6
WP_002865471.1\|1103512_1105183_-\|terminase	phage terminase large subunit	A0A0A1IW02	Pseudomonas_phage	8.0e-93	41.6
WP_002803360.1\|1105182_1105782_-	DUF1804 family protein	NA	NA	NA	NA
WP_002855185.1\|1105774_1106233_-	DUF1320 domain-containing protein	NA	NA	NA	NA
WP_032584092.1\|1106348_1107326_-	hypothetical protein	R9TRN2	Rhizobium_phage	5.6e-06	23.4
WP_032584089.1\|1107328_1107856_-	hypothetical protein	NA	NA	NA	NA
WP_002901531.1\|1107858_1108674_-	hypothetical protein	A0A2H4JAW3	uncultured_Caudovirales_phage	2.9e-24	48.4
WP_002784501.1\|1108675_1109110_-	hypothetical protein	NA	NA	NA	NA
WP_075912925.1\|1109258_1109648_+	DUF882 domain-containing protein	A0A1X9Q0V8	Human_gokushovirus	9.4e-21	45.9
WP_002827119.1\|1109658_1110000_+	hypothetical protein	NA	NA	NA	NA
WP_002784496.1\|1109996_1110245_+	hypothetical protein	NA	NA	NA	NA
WP_002784492.1\|1110356_1110671_+	hypothetical protein	NA	NA	NA	NA
WP_002876443.1\|1110670_1111303_+\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	1.7e-08	34.6
WP_002795238.1\|1111311_1111503_+	hypothetical protein	NA	NA	NA	NA
WP_002795239.1\|1111499_1111790_+\|plate	baseplate assembly protein	Q8H9N4	Vibrio_phage	2.7e-09	40.8
WP_032584246.1\|1111786_1112953_+\|plate	baseplate assembly protein	Q8H9N3	Vibrio_phage	3.9e-14	24.6
WP_043012798.1\|1112949_1113570_+\|tail	phage tail protein I	A7YGM6	Campylobacter_phage	2.8e-59	97.4
WP_042963348.1\|1113569_1114535_+\|tail	phage tail protein	A7YG81	Campylobacter_phage	2.7e-117	83.9
WP_002924980.1\|1114559_1115066_+	DUF4376 domain-containing protein	A7YGA6	Campylobacter_phage	5.7e-87	99.4
WP_042963349.1\|1115062_1115434_+	DUF1353 domain-containing protein	A7YGF6	Campylobacter_phage	1.7e-67	99.2
WP_002922154.1\|1115557_1116565_+	hypothetical protein	A7YGT6	Campylobacter_phage	7.7e-192	100.0
WP_075912953.1\|1116583_1117774_+\|tail	phage tail protein	A7YGA3	Campylobacter_phage	4.2e-197	99.7
WP_002865794.1\|1117896_1118412_+\|tail	tail protein	A0A0F7LDZ1	Escherichia_phage	5.8e-10	25.7
WP_002789979.1\|1118422_1118659_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_002870149.1\|1118766_1118997_-	hypothetical protein	NA	NA	NA	NA
WP_044261143.1\|1119026_1120991_+\|tail	phage tail tape measure protein	A7YG97	Campylobacter_phage	4.2e-08	29.6
WP_002789966.1\|1120992_1121367_+\|tail	tail protein	NA	NA	NA	NA
WP_002789964.1\|1121359_1121551_+\|tail	tail protein	NA	NA	NA	NA
WP_002865687.1\|1121544_1122513_+\|tail	phage tail protein	A0A219Y9Y2	Aeromonas_phage	4.3e-14	26.8
WP_075912954.1\|1122614_1123430_+	DNA adenine methylase	A7YGW6	Campylobacter_phage	1.8e-151	99.6
WP_075912922.1\|1123459_1123747_-	hypothetical protein	A7YGI8	Campylobacter_phage	1.9e-47	98.9
WP_002843339.1\|1123826_1124021_-	hypothetical protein	A7YG72	Campylobacter_phage	1.8e-28	100.0
WP_002865000.1\|1124030_1124351_-	hypothetical protein	A7YGI4	Campylobacter_phage	1.3e-52	100.0
WP_032582421.1\|1124431_1125061_-	LexA family transcriptional regulator	A7YGK7	Campylobacter_phage	2.6e-60	100.0
WP_075912921.1\|1125140_1126829_-	AAA family ATPase	X2KLG0	Campylobacter_phage	1.2e-88	37.9
WP_002859148.1\|1127756_1128209_+	hypothetical protein	NA	NA	NA	NA
WP_002858312.1\|1128205_1128835_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_002858441.1\|1128812_1129445_-	thiamine phosphate synthase	NA	NA	NA	NA
WP_002858043.1\|1129434_1130247_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_002858132.1\|1130243_1130930_-	endonuclease III domain-containing protein	NA	NA	NA	NA
WP_002852748.1\|1130926_1131688_-	ATP-binding protein	NA	NA	NA	NA
WP_052834649.1\|1131689_1134626_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_002859143.1\|1134625_1135021_-	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_002852904.1\|1134957_1135860_-	M23 family metallopeptidase	A0A2D0ZM66	Rhodococcus_phage	3.5e-18	46.4
WP_010891906.1\|1135846_1137031_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_002858150.1\|1136996_1138394_-	hypothetical protein	NA	NA	NA	NA
WP_002852685.1\|1138377_1138890_-	lipoprotein	NA	NA	NA	NA
WP_052834648.1\|1138886_1141316_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	4.0e-154	39.9
WP_002858025.1\|1141325_1142297_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.7e-50	46.5
WP_002857963.1\|1142296_1143877_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_002786346.1\|1143869_1144142_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.7e-09	40.0
WP_002852744.1\|1144114_1145440_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_002852836.1\|1145676_1146873_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.1e-67	40.8
WP_002858067.1\|1147013_1148237_+	serine/threonine transporter SstT	NA	NA	NA	NA
WP_002852714.1\|1148246_1149134_+	aspartate carbamoyltransferase	Q84489	Paramecium_bursaria_Chlorella_virus	2.1e-28	33.0
WP_002858266.1\|1149137_1150859_+	M3 family oligoendopeptidase	A0A1X9I5X5	Streptococcus_phage	2.9e-13	20.5
WP_002852822.1\|1150852_1151290_+	hypothetical protein	NA	NA	NA	NA
WP_002852893.1\|1151286_1153362_+	AAA family ATPase	A7KV33	Bacillus_phage	2.4e-94	36.0
WP_002852653.1\|1153358_1154177_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_002852854.1\|1154170_1154398_+	carbon storage regulator CsrA	NA	NA	NA	NA
WP_002852673.1\|1154394_1155162_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_002852861.1\|1155158_1155611_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.6e-19	40.3
WP_002852711.1\|1155621_1156224_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_002852892.1\|1156223_1156514_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A218MMY6	uncultured_virus	2.8e-14	50.6
WP_002852743.1\|1156510_1158640_+	AAA domain-containing protein	K4FB40	Cronobacter_phage	4.7e-130	44.8
WP_002852895.1\|1158614_1159262_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_002852708.1\|1159283_1160573_-	energy taxis response protein CetZ	A0A2H4J162	uncultured_Caudovirales_phage	6.9e-12	52.2
WP_002864805.1\|1160653_1161280_-	MarC family protein	NA	NA	NA	NA
WP_002826104.1\|1161294_1161654_-	methionine-R-sulfoxide reductase	NA	NA	NA	NA
WP_052834647.1\|1161743_1162541_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_002852812.1\|1162531_1163260_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_002852690.1\|1163269_1163887_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_002852796.1\|1163883_1165821_-\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	5.8e-103	45.3

DBSCAN-SWA_4

1312312 : 1384512

Campylobacter_phage(47.37%)

integrase,tRNA,head,terminase,plate,transposase,tail

attL 1348653:1348670|attR 1388258:1388275

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052805923.1\|1312312_1314154_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_002898426.1\|1314150_1316130_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	1.2e-18	33.6
WP_002871657.1\|1316129_1317221_-	nitronate monooxygenase	NA	NA	NA	NA
WP_002859323.1\|1317217_1318423_-\|tRNA	tyrosine--tRNA ligase	A0A1S6UA79	Serratia_phage	6.5e-28	29.9
WP_002866265.1\|1318434_1320630_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	1.4e-07	44.0
WP_002853464.1\|1320613_1320838_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_002858454.1\|1320848_1321568_-	UMP kinase	NA	NA	NA	NA
WP_002887888.1\|1321619_1322813_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_002853622.1\|1322809_1323616_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_002853534.1\|1323602_1324268_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-17	34.8
WP_002887891.1\|1324337_1325516_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_075912963.1\|1325515_1326751_-	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_002858282.1\|1326695_1327664_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_002887899.1\|1327741_1328842_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_002884343.1\|1329310_1330654_+	potassium transporter	NA	NA	NA	NA
WP_002853664.1\|1330664_1331315_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_002859328.1\|1331311_1331983_-	hypothetical protein	NA	NA	NA	NA
WP_002887902.1\|1331988_1332615_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002859330.1\|1332611_1333847_-	malate dehydrogenase	NA	NA	NA	NA
WP_002859331.1\|1333848_1335240_-\|tRNA	glutamate--tRNA ligase	A0A2K9L0I5	Tupanvirus	3.3e-15	29.8
WP_002853648.1\|1335304_1336120_+	peptidylprolyl isomerase SalC	NA	NA	NA	NA
WP_057042726.1\|1336156_1337488_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002853623.1\|1337489_1337945_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002854086.1\|1338092_1338653_+	dCTP deaminase	S5VM63	Pseudomonas_phage	3.3e-59	61.2
WP_002858028.1\|1338702_1339707_+	UDP-N-acetylglucosamine 4,6-dehydratase (inverting)	A0A2P1ELS8	Moumouvirus	1.4e-44	38.9
WP_002856503.1\|1339708_1340839_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	A0A0E3G0Y1	Synechococcus_phage	2.4e-16	27.6
WP_052805375.1\|1342134_1342926_+	aminoglycoside N(3)-acetyltransferase	NA	NA	NA	NA
WP_002856586.1\|1342946_1343738_+	N-acetyltransferase LegH	NA	NA	NA	NA
WP_002803470.1\|1343768_1343999_+	acyl carrier protein	NA	NA	NA	NA
WP_002873708.1\|1343995_1344889_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_002873709.1\|1344881_1345298_+	hypothetical protein	NA	NA	NA	NA
WP_052834631.1\|1345294_1346857_+	HAD-IIIC family phosphatase	NA	NA	NA	NA
WP_002789842.1\|1346846_1347908_+	beta-ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_002789840.1\|1347907_1348129_+	acyl carrier protein	NA	NA	NA	NA
WP_075912964.1\|1348142_1348721_-	DUF2920 family protein	NA	NA	NA	NA
1348653:1348670	attL	NA	NA	NA	NA
WP_115768228.1\|1348741_1349359_-	DUF2920 family protein	NA	NA	NA	NA
WP_025399152.1\|1349371_1350598_-	DUF2920 family protein	NA	NA	NA	NA
WP_002843734.1\|1350658_1352167_+	AMP-binding protein	A0A2K9L3I8	Tupanvirus	1.6e-39	29.0
WP_075912965.1\|1352206_1352404_+	acyl carrier protein	NA	NA	NA	NA
WP_075912921.1\|1352846_1354535_+	AAA family ATPase	X2KLG0	Campylobacter_phage	1.2e-88	37.9
WP_032582421.1\|1354614_1355244_+	LexA family transcriptional regulator	A7YGK7	Campylobacter_phage	2.6e-60	100.0
WP_002865000.1\|1355324_1355645_+	hypothetical protein	A7YGI4	Campylobacter_phage	1.3e-52	100.0
WP_002875224.1\|1355654_1355849_+	hypothetical protein	A7YG72	Campylobacter_phage	5.1e-28	98.4
WP_075912922.1\|1355928_1356216_+	hypothetical protein	A7YGI8	Campylobacter_phage	1.9e-47	98.9
WP_052790176.1\|1356245_1357061_-	DNA adenine methylase	A7YGW6	Campylobacter_phage	8.2e-152	100.0
WP_002875578.1\|1357165_1357654_-	virion morphogenesis protein	A7YG96	Campylobacter_phage	1.6e-89	100.0
WP_075912924.1\|1357657_1359880_-\|tail	phage tail tape measure protein	A7YG97	Campylobacter_phage	0.0e+00	99.7
WP_002784655.1\|1359921_1360227_+	hypothetical protein	A7YG98	Campylobacter_phage	4.7e-36	100.0
WP_002843342.1\|1360338_1360578_-\|tail	phage tail assembly protein	A7YGZ3	Campylobacter_phage	3.2e-11	62.5
WP_002865376.1\|1360730_1361240_-\|tail	tail protein	A7YG76	Campylobacter_phage	3.3e-90	100.0
WP_052835012.1\|1361266_1362460_-\|tail	phage tail protein	A7YGA3	Campylobacter_phage	5.0e-198	100.0
WP_002922154.1\|1362478_1363486_-	hypothetical protein	A7YGT6	Campylobacter_phage	7.7e-192	100.0
WP_042963349.1\|1363609_1363981_-	DUF1353 domain-containing protein	A7YGF6	Campylobacter_phage	1.7e-67	99.2
WP_002924980.1\|1363977_1364484_-	DUF4376 domain-containing protein	A7YGA6	Campylobacter_phage	5.7e-87	99.4
WP_042963348.1\|1364508_1365474_-\|tail	phage tail protein	A7YG81	Campylobacter_phage	2.7e-117	83.9
WP_043012798.1\|1365473_1366094_-\|tail	phage tail protein I	A7YGM6	Campylobacter_phage	2.8e-59	97.4
WP_032584246.1\|1366090_1367257_-\|plate	baseplate assembly protein	Q8H9N3	Vibrio_phage	3.9e-14	24.6
WP_002795239.1\|1367253_1367544_-\|plate	baseplate assembly protein	Q8H9N4	Vibrio_phage	2.7e-09	40.8
WP_002795238.1\|1367540_1367732_-	hypothetical protein	NA	NA	NA	NA
WP_002876443.1\|1367740_1368373_-\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	1.7e-08	34.6
WP_002865847.1\|1368369_1368834_-	DUF1804 family protein	NA	NA	NA	NA
WP_002790001.1\|1368964_1370005_+	hypothetical protein	NA	NA	NA	NA
WP_052823261.1\|1370004_1370892_+\|head	head protein	A0A2K9VH18	Faecalibacterium_phage	3.5e-63	43.7
WP_014517220.1\|1370891_1371203_+	hypothetical protein	NA	NA	NA	NA
WP_002790896.1\|1371199_1371553_+	hypothetical protein	NA	NA	NA	NA
WP_002790266.1\|1371549_1371915_+	hypothetical protein	NA	NA	NA	NA
WP_075912925.1\|1371904_1372294_+	DUF882 domain-containing protein	A0A1X9Q0V8	Human_gokushovirus	9.4e-21	45.9
WP_002827119.1\|1372304_1372646_+	hypothetical protein	NA	NA	NA	NA
WP_002784496.1\|1372642_1372891_+	hypothetical protein	NA	NA	NA	NA
WP_002790261.1\|1373002_1373317_+	hypothetical protein	NA	NA	NA	NA
WP_002865465.1\|1373406_1374933_+\|terminase	phage terminase large subunit	A0A0M3LQB7	Mannheimia_phage	6.4e-49	31.1
WP_044261469.1\|1374929_1376312_+	DUF935 family protein	A0A0M3LRU4	Mannheimia_phage	3.7e-11	22.7
WP_002870187.1\|1376304_1377438_+	hypothetical protein	A0A1C6ZDL9	Pseudomonas_phage	5.1e-27	34.2
WP_044261472.1\|1377576_1378056_-	hypothetical protein	A7YGZ0	Campylobacter_phage	3.0e-05	28.8
WP_002790256.1\|1378042_1378234_-	hypothetical protein	NA	NA	NA	NA
WP_052834784.1\|1378285_1378714_-	hypothetical protein	NA	NA	NA	NA
WP_002864977.1\|1378710_1378890_-	hypothetical protein	NA	NA	NA	NA
WP_002791413.1\|1379004_1379391_-	hypothetical protein	D5GVQ0	Campylobacter_virus	2.7e-36	56.4
WP_002791414.1\|1379387_1379660_-	hypothetical protein	NA	NA	NA	NA
WP_043012819.1\|1379723_1379903_-	hypothetical protein	NA	NA	NA	NA
WP_002806832.1\|1379899_1380385_-	host-nuclease inhibitor protein Gam	A0A2K9VGT9	Faecalibacterium_phage	3.2e-18	34.0
WP_002791419.1\|1380491_1380833_-	hypothetical protein	NA	NA	NA	NA
WP_002824157.1\|1380966_1381152_-	hypothetical protein	NA	NA	NA	NA
WP_002795448.1\|1381148_1381340_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_002806833.1\|1381342_1382266_-	AAA family ATPase	A0A2H4JAW1	uncultured_Caudovirales_phage	3.9e-09	24.5
WP_075912966.1\|1382436_1384512_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
1388258:1388275	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1505901 : 1512538

Tupanvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002857908.1\|1505901_1506567_-	D-glycero-D-manno-heptose 1-phosphate guanosyltransferase	A0A2K9L821	Tupanvirus	4.1e-08	26.6
WP_002857991.1\|1506554_1507160_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	2.2e-16	35.0
WP_002858413.1\|1507147_1508167_-	D-glycero-D-manno-heptose 7-phosphate kinase	A0A222YW25	Synechococcus_phage	2.7e-59	40.7
WP_002857889.1\|1508186_1509038_-	FkbM family methyltransferase	NA	NA	NA	NA
WP_002858299.1\|1509056_1509998_-	NAD-dependent epimerase/dehydratase	A0A0F7LC08	uncultured_marine_virus	1.0e-73	46.1
WP_002864205.1\|1510021_1511062_-	GDP-L-fucose synthase	M1HWW2	Paramecium_bursaria_Chlorella_virus	1.7e-69	44.4
WP_032584824.1\|1511061_1511685_-	hypothetical protein	NA	NA	NA	NA
WP_002865659.1\|1511677_1511989_-	hypothetical protein	NA	NA	NA	NA
WP_002858190.1\|1511992_1512538_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A1D8EQH2	Escherichia_phage	6.1e-18	32.4

DBSCAN-SWA_6

1751766 : 1782060

Campylobacter_phage(60.71%)

integrase,head,terminase,plate,transposase,tail

attL 1749755:1749771|attR 1755363:1755379

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1749755:1749771	attL	NA	NA	NA	NA
WP_052834667.1\|1751766_1753881_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_002790751.1\|1753969_1754827_+	AAA family ATPase	A0A0M3LP72	Mannheimia_phage	9.6e-26	31.2
WP_002795448.1\|1754823_1755015_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_002824157.1\|1755011_1755197_+	hypothetical protein	NA	NA	NA	NA
WP_002865074.1\|1755756_1756095_+	hypothetical protein	NA	NA	NA	NA
1755363:1755379	attR	NA	NA	NA	NA
WP_002806832.1\|1756289_1756775_+	host-nuclease inhibitor protein Gam	A0A2K9VGT9	Faecalibacterium_phage	3.2e-18	34.0
WP_043012819.1\|1756771_1756951_+	hypothetical protein	NA	NA	NA	NA
WP_002791414.1\|1757014_1757287_+	hypothetical protein	NA	NA	NA	NA
WP_002791413.1\|1757283_1757670_+	hypothetical protein	D5GVQ0	Campylobacter_virus	2.7e-36	56.4
WP_002864977.1\|1757784_1757964_+	hypothetical protein	NA	NA	NA	NA
WP_052834784.1\|1757960_1758389_+	hypothetical protein	NA	NA	NA	NA
WP_002790256.1\|1758440_1758632_+	hypothetical protein	NA	NA	NA	NA
WP_044261472.1\|1758618_1759098_+	hypothetical protein	A7YGZ0	Campylobacter_phage	3.0e-05	28.8
WP_002870187.1\|1759236_1760370_-	hypothetical protein	A0A1C6ZDL9	Pseudomonas_phage	5.1e-27	34.2
WP_044261469.1\|1760362_1761745_-	DUF935 family protein	A0A0M3LRU4	Mannheimia_phage	3.7e-11	22.7
WP_002865465.1\|1761741_1763268_-\|terminase	phage terminase large subunit	A0A0M3LQB7	Mannheimia_phage	6.4e-49	31.1
WP_002790261.1\|1763357_1763672_-	hypothetical protein	NA	NA	NA	NA
WP_002784496.1\|1763783_1764032_-	hypothetical protein	NA	NA	NA	NA
WP_002827119.1\|1764028_1764370_-	hypothetical protein	NA	NA	NA	NA
WP_075912925.1\|1764380_1764770_-	DUF882 domain-containing protein	A0A1X9Q0V8	Human_gokushovirus	9.4e-21	45.9
WP_002790266.1\|1764759_1765125_-	hypothetical protein	NA	NA	NA	NA
WP_002790896.1\|1765121_1765475_-	hypothetical protein	NA	NA	NA	NA
WP_014517220.1\|1765471_1765783_-	hypothetical protein	NA	NA	NA	NA
WP_052823261.1\|1765782_1766670_-\|head	head protein	A0A2K9VH18	Faecalibacterium_phage	3.5e-63	43.7
WP_002790001.1\|1766669_1767710_-	hypothetical protein	NA	NA	NA	NA
WP_002865847.1\|1767840_1768305_+	DUF1804 family protein	NA	NA	NA	NA
WP_002876443.1\|1768301_1768934_+\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	1.7e-08	34.6
WP_002795238.1\|1768942_1769134_+	hypothetical protein	NA	NA	NA	NA
WP_002795239.1\|1769130_1769421_+\|plate	baseplate assembly protein	Q8H9N4	Vibrio_phage	2.7e-09	40.8
WP_032584246.1\|1769417_1770584_+\|plate	baseplate assembly protein	Q8H9N3	Vibrio_phage	3.9e-14	24.6
WP_043012798.1\|1770580_1771201_+\|tail	phage tail protein I	A7YGM6	Campylobacter_phage	2.8e-59	97.4
WP_042963348.1\|1771200_1772166_+\|tail	phage tail protein	A7YG81	Campylobacter_phage	2.7e-117	83.9
WP_002924980.1\|1772190_1772697_+	DUF4376 domain-containing protein	A7YGA6	Campylobacter_phage	5.7e-87	99.4
WP_042963349.1\|1772693_1773065_+	DUF1353 domain-containing protein	A7YGF6	Campylobacter_phage	1.7e-67	99.2
WP_002922154.1\|1773188_1774196_+	hypothetical protein	A7YGT6	Campylobacter_phage	7.7e-192	100.0
WP_052835012.1\|1774214_1775408_+\|tail	phage tail protein	A7YGA3	Campylobacter_phage	5.0e-198	100.0
WP_002865376.1\|1775434_1775944_+\|tail	tail protein	A7YG76	Campylobacter_phage	3.3e-90	100.0
WP_002843342.1\|1776096_1776336_+\|tail	phage tail assembly protein	A7YGZ3	Campylobacter_phage	3.2e-11	62.5
WP_002784655.1\|1776447_1776753_-	hypothetical protein	A7YG98	Campylobacter_phage	4.7e-36	100.0
WP_075912924.1\|1776794_1779017_+\|tail	phage tail tape measure protein	A7YG97	Campylobacter_phage	0.0e+00	99.7
WP_002875578.1\|1779020_1779509_+	virion morphogenesis protein	A7YG96	Campylobacter_phage	1.6e-89	100.0
WP_052790176.1\|1779613_1780429_+	DNA adenine methylase	A7YGW6	Campylobacter_phage	8.2e-152	100.0
WP_075912922.1\|1780458_1780746_-	hypothetical protein	A7YGI8	Campylobacter_phage	1.9e-47	98.9
WP_002875224.1\|1780825_1781020_-	hypothetical protein	A7YG72	Campylobacter_phage	5.1e-28	98.4
WP_002865000.1\|1781029_1781350_-	hypothetical protein	A7YGI4	Campylobacter_phage	1.3e-52	100.0
WP_032582421.1\|1781430_1782060_-	LexA family transcriptional regulator	A7YGK7	Campylobacter_phage	2.6e-60	100.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP007188.1|WP_002843342.1|1776096_1776336_+|phage-tail-assembly-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP007188.1|WP_002843342.1|1776096_1776336_+|phage-tail-assembly-protein

1776096_1776336_+

79 aa aa

1751766-1782060

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location
NZ_CP007188_1	Orphan	1.1\|168818\|52\|NZ_CP007188\|CRISPRCasFinder	168818-168869	52	1758741-1758690
NZ_CP007188_2	Orphan	2.1\|297694\|52\|NZ_CP007188\|CRISPRCasFinder	297694-297745	52	1758741-1758690
NZ_CP007188_3	Orphan	3.1\|1377934\|52\|NZ_CP007188\|CRISPRCasFinder	1377934-1377985	52	1758741-1758690

1. spacer 1.1|168818|52|NZ_CP007188|CRISPRCasFinder matches to NZ_CP007188 position: 1758741-1758690, mismatch: 0

tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	CRISPR spacer
tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	Protospacer
****************************************************

2. spacer 2.1|297694|52|NZ_CP007188|CRISPRCasFinder matches to NZ_CP007188 position: 1758741-1758690, mismatch: 0

tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	CRISPR spacer
tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	Protospacer
****************************************************

3. spacer 3.1|1377934|52|NZ_CP007188|CRISPRCasFinder matches to NZ_CP007188 position: 1758741-1758690, mismatch: 0

tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	CRISPR spacer
tttgctttctttataaagtgtttcagcaattatttcttttaaaataatctgc	Protospacer
****************************************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007188

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information