CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019158	Sphingobacterium sp. B29 chromosome, complete genome	2 crisprs	WYL,cas3,PD-DExK,csa3,DEDDh,RT	0	3	1	0

1. NZ_CP019158

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019158_1

• CRISPR_ID: NZ_CP019158_1
• CRISPR_location: 1944724-1945053
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 6 spacers

Consensus repeat of NZ_CP019158_1

Consensus_repeat	Method
GTAGAAAGATNAGNAGAA	CRT

spacers of NZ_CP019158_1

>1.1|1944742|54|NZ_CP019158|CRT
GAACAAGTAGAAAGATTAGGAGAAGAACAAGTAGAAAGATTAGGAGAAGAGCAA
>1.2|1944814|30|NZ_CP019158|CRT
GAGCAAGTAGAAAGATAAGTAGAAGAGCAA
>1.3|1944862|30|NZ_CP019158|CRT
GAGCAAGTAGAAAGATAAGTAGAAGAGCAA
>1.4|1944910|18|NZ_CP019158|CRT
GAGCAAGTAGAAAGATAA
>1.5|1944946|42|NZ_CP019158|CRT
GAGCAAGTAGAAAGAGAATTAGAAAGATAAGTAGAAGAGCAA
>1.6|1945006|30|NZ_CP019158|CRT
GAACTAGGAAAAAGATAAGTAGAAGAGCTT

CRISPR arrays and Neighbor proteins around NZ_CP019158_1

CRISPR arrays

The CRISPR arrays of NZ_CP019158_1

>merge|NZ_CP019158|1|1944724-1945053|CRT
GTAGAAAGATTAGGAGAAGAACAAGTAGAAAGATTAGGAGAAGAACAAGTAGAAAGATTAGGAGAAGAGCAAGTAGAAAGATAAGTAGAAGAGCAAGTAGAAAGATAAGTAGAAGAGCAAGTAGAAAGATAAGTAGAAGAGCAAGTAGAAAGATAAGTAGAAGAGCAAGTAGAAAGATAAGTAGAAGAGCAAGTAGAAAGATAAGTAGAAAGATAAGTAGAAGAGCAAGTAGAAAGAGAATTAGAAAGATAAGTAGAAGAGCAAGTAGAAAGATTAGGAGAAGAACTAGGAAAAAGATAAGTAGAAGAGCTTGGAGAAAGATTAAGAAAA

>NZ_CP019158|1|1|1944724-1945053|CRT
GTAGAAAGATTAGGAGAA	GAACAAGTAGAAAGATTAGGAGAAGAACAAGTAGAAAGATTAGGAGAAGAGCAA
GTAGAAAGATAAGTAGAA	GAGCAAGTAGAAAGATAAGTAGAAGAGCAA
GTAGAAAGATAAGTAGAA	GAGCAAGTAGAAAGATAAGTAGAAGAGCAA
GTAGAAAGATAAGTAGAA	GAGCAAGTAGAAAGATAA
GTAGAAAGATAAGTAGAA	GAGCAAGTAGAAAGAGAATTAGAAAGATAAGTAGAAGAGCAA
GTAGAAAGATTAGGAGAA	GAACTAGGAAAAAGATAAGTAGAAGAGCTT
GGAGAAAGATTAAGAAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019158.1|WP_075991505.1|1936285_1937212_+|iron-sulfur-cluster-repair-di-iron-protein	unknown	unknown	gnl|CDD|274701
NZ_CP019158.1|WP_075991512.1|1945121_1945661_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019158.1|WP_075991520.1|1960088_1963307_+|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl|CDD|274948
NZ_CP019158.1|WP_075991507.1|1938055_1939318_+|hypothetical-protein	unknown	unknown	gnl|CDD|238831
NZ_CP019158.1|WP_070565732.1|1939355_1939685_+|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl|CDD|225062
NZ_CP019158.1|WP_157625954.1|1957553_1957928_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019158.1|WP_075991516.1|1954738_1956292_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|226121
NZ_CP019158.1|WP_075991514.1|1950129_1952475_-|restriction-endonuclease	unknown	unknown	gnl|CDD|214640
NZ_CP019158.1|WP_075991513.1|1945860_1950087_-|hypothetical-protein	unknown	unknown	gnl|CDD|227922
NZ_CP019158.1|WP_075991510.1|1940747_1942961_+|DUF2075-domain-containing-protein	unknown	unknown	gnl|CDD|378274
NZ_CP019158.1|WP_075991503.1|1934767_1935481_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP019158.1|WP_075991506.1|1937226_1938054_+|DUF2249-domain-containing-protein	unknown	unknown	gnl|CDD|370777
NZ_CP019158.1|WP_075991509.1|1940407_1940737_+|nucleotide-pyrophosphohydrolase	unknown	unknown	gnl|CDD|212144
NZ_CP019158.1|WP_075991521.1|1963310_1964663_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl|CDD|185760
NZ_CP019158.1|WP_172840656.1|1958054_1960079_+|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl|CDD|239264
NZ_CP019158.1|WP_075991511.1|1943068_1944718_+|putative-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|225420
NZ_CP019158.1|WP_075991508.1|1939836_1940283_+|nuclear-transport-factor-2-family-protein	unknown	unknown	unknown
NZ_CP019158.1|WP_075991504.1|1935488_1936256_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|372253
NZ_CP019158.1|WP_075991517.1|1956436_1956880_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_CP019158.1|WP_075991515.1|1952621_1954451_-|ATP-dependent-helicase	unknown	unknown	gnl|CDD|223288

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019158.1|WP_075991505.1|1936285_1937212_+|iron-sulfur-cluster-repair-di-iron-protein	gnl|CDD|274701	TIGR03652, FeS_repair_RIC, iron-sulfur cluster repair di-iron protein. Members of this protein family, designated variously as YftE, NorA, DrnN, and NipC, are di-iron proteins involved in the repair of iron-sulfur clusters. Previously assigned names reflect pleiotropic effects of damage from NO or other oxidative stress when this protein is mutated. The suggested name now is RIC, for Repair of Iron Centers. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.15764e-74
NZ_CP019158.1|WP_075991516.1|1954738_1956292_-|AAA-family-ATPase	gnl|CDD|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	1.2237e-29
NZ_CP019158.1|WP_075991520.1|1960088_1963307_+|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl|CDD|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	1.27613e-104
NZ_CP019158.1|WP_075991510.1|1940747_1942961_+|DUF2075-domain-containing-protein	gnl|CDD|378274	pfam09848, DUF2075, Uncharacterized conserved protein (DUF2075). This domain, found in various prokaryotic proteins (including putative ATP/GTP binding proteins), has no known function.	1.90509e-43
NZ_CP019158.1|WP_070565732.1|1939355_1939685_+|metal-sulfur-cluster-assembly-factor	gnl|CDD|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	1.01315e-24
NZ_CP019158.1|WP_075991513.1|1945860_1950087_-|hypothetical-protein	gnl|CDD|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	9.68104e-07
NZ_CP019158.1|WP_075991507.1|1938055_1939318_+|hypothetical-protein	gnl|CDD|238831	cd01661, cbb3_Oxidase_I, Cytochrome cbb3 oxidase subunit I. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found mainly in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons to the binuclear center. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. The fourth subunit (ccoQ) has been shown to protect the core complex from proteolytic degradation by serine proteases. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from cytochrome c on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. The polar residues that form the D- and K-pathways in subunit I of other cytochrome c and ubiquinol oxidases are absent in cbb3. The proton pathways remain undefined. A pathway for the transfer of pumped protons beyond the binuclear center also remains undefined. It is believed that electrons are passed from cytochrome c (the electron donor) to the low-spin heme via ccoP and ccoO, respectively, and directly from the low-spin heme to the binuclear center.	0.000296399
NZ_CP019158.1|WP_075991503.1|1934767_1935481_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.76966e-63
NZ_CP019158.1|WP_075991506.1|1937226_1938054_+|DUF2249-domain-containing-protein	gnl|CDD|370777	pfam10006, DUF2249, Uncharacterized conserved protein (DUF2249). Members of this family of hypothetical bacterial proteins have no known function.	2.22862e-08
NZ_CP019158.1|WP_075991509.1|1940407_1940737_+|nucleotide-pyrophosphohydrolase	gnl|CDD|212144	cd11537, NTP-PPase_RS21-C6_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in mouse RS21-C6 protein and its homologs. RS21-C6 proteins, highly expressed in all vertebrate genomes and green plants, act as house-cleaning enzymes, removing 5-methyl dCTP (m5dCTP) in order to prevent gene silencing. They show significant sequence similarity to the dimeric 2-deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTP pyrophosphatase or dUTPase) and NTP-PPase MazG proteins. However, unlike typical tandem-domain MazG proteins, RS21-C6 contains a single MazG-like domain and functions as a tetramer (a dimer of dimers) with a typical four-helical bundle. Divalent ions, such as Mg2+, are required for its pyrophosphatase activity. This family also includes a pyrophosphatase from Archaeoglobus fulgidus (Af1178). Although its biological role remains unclear, Af1178 shows significant sequence similarity to the mouse RS21-C6 protein.	5.14255e-35
NZ_CP019158.1|WP_075991521.1|1963310_1964663_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl|CDD|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	3.25052e-21
NZ_CP019158.1|WP_172840656.1|1958054_1960079_+|TlpA-family-protein-disulfide-reductase	gnl|CDD|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.88998e-12
NZ_CP019158.1|WP_075991511.1|1943068_1944718_+|putative-DNA-binding-domain-containing-protein	gnl|CDD|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	4.86143e-42
NZ_CP019158.1|WP_075991514.1|1950129_1952475_-|restriction-endonuclease	gnl|CDD|214640	smart00382, AAA, ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.	0.000734084
NZ_CP019158.1|WP_075991504.1|1935488_1936256_+|ABC-transporter-permease-subunit	gnl|CDD|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	8.90725e-05
NZ_CP019158.1|WP_075991517.1|1956436_1956880_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.13687e-06
NZ_CP019158.1|WP_075991515.1|1952621_1954451_-|ATP-dependent-helicase	gnl|CDD|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	2.38372e-96

Protein sequences

>NZ_CP019158.1|WP_075991511.1|1943068_1944718_+|putative-DNA-binding-domain-containing-protein
MNTHILESLLSLSSENEVVEFKEAKNNYDFTKLGKYFSAISNEANLFGKPYGWLVFGVEDKKHTVVGTNYRSNRTDLDKLKGEIANKTTNRITFIEIHEVIKEGGRVLMFQIPAAPRGIPVSFDGHYYARDGEELVPLNLEKIERIRAQATQHDWSAAVIPDATIEDLDEEAIALARRNYKSKFPDKAEEMDKWDDITFLNKAKVTVKGKVTRTAVILLGKDESEHFLNPADVKIRWKLVDTENNDIDYDIFGLPLILSVEKVFAKIRNIKYRYMQEGTIFPAEVSKYEPFSIREAINNCIAHQDYTKGARVNVVEMEDQLVFTNYGNFIPGSVEKVVIEDAPEEFYRNKFLATAMFNLKMVDTAGGGIKKIFNFQRERYFPLPDYDLSDDKVKVTISGKVLNLDYARLLAQHKDLSLEDIMALDKVQKKKPLSNHEESELRRKKLIEGRKPNYFIGLHVAQKSGDKVGYTKNKAFDNQYYRDLILKAISQHHSMSRSEIDELLWNKLPDWMTDEQRKRKVNNLITKLKNHNKIVNKGTFKYSMWELAN
>NZ_CP019158.1|WP_075991510.1|1940747_1942961_+|DUF2075-domain-containing-protein
MSELDIKEVHIVPVGSTGEVKDTDSKLDFYNSALVYLLNDKRSIYIGESIDIKNRFSSHNRHDSKKDLLIRHAIYSHLFNKSVTLHLEAFLINLFSAEKGLKLINANLGNNGHYYHQKKEYEVLFPQIWKQLEELKIARTSFEEIINSNVFKYSPYKSLNLDQQQAVLACLKMLVDDKKGIFIQGNAGTGKTIIAIYVLKLLVTPIRYFEQFEMKDEFSMEAFGLLNAYRDKHGITVENEKDLKDQVALVVSMTSLRSTLQKVFKDIDQLSSSMVISPTDISKRTYKVVLVDEAHRLRRRKNISGYGDFDKSNTRLGFDINEGTELDWVLKQSENQIFFYDSNQSIRTTDLPPSRFEVLKNSKAYDSVRLQTQIRSEGGDLFTDFVHRLFDLELLPNERFESNDFELKLFDSFVAMRGQVFQKEAEMGLSRLVAGFSWEYKTKDKKNRHLYDMTIEGIDLRWNSTAKDWINSKNAINEVGSIHTVFGNDLNYIAIVFGKEIDYDPIAKTIVVYRDEYKDTNGKNSTDDLDLLFYVKNIYKTLMFRGIRGVYVYVCNPNLKAYLSQHMEVVTGNSGNESKVIPSRLISYEPTASSIPYYDLEIAAGSFSELQQSETLQYVEVEERYQDPQRYFACKVVGESMNKIIPNGSICLFERYQGGSRNGLICLVESSSFEDRDFGANYTIKEYSSKKTITEEGWQHQEIILLPKSSDDSYSPIILKDEETVDLQVIGIFRQVL
>NZ_CP019158.1|WP_075991509.1|1940407_1940737_+|nucleotide-pyrophosphohydrolase
MSDIQQLITQIRAFRDARDWEQFHNSKDLAVALSIEASELLELFLWKGNEDANPDKLKYELADVLMYALLLADKHGLDVKQIVEDKMRLNNEKYPVEKAKGTAKKYNEL
>NZ_CP019158.1|WP_075991508.1|1939836_1940283_+|nuclear-transport-factor-2-family-protein
MKVLVKTFAAAALIAVSTFAMAAEGPGAKATKANVNLSTADFALDHYVAVTIEGESAGVEQLFAADFNQKIQATNAQSNSRSEVVKSLKKQKGEKLNCTVSTAIIEESADYMVAKVTLKFENFTKTDLVTLERVGNDWKVSKSINSYK
>NZ_CP019158.1|WP_070565732.1|1939355_1939685_+|metal-sulfur-cluster-assembly-factor
MKIDLTKPEASDQLKAVQVLMLVMDPELGINIVDMGLIYDINLTDPSRIVVTMTLSSSYCPMGDSIVHGVEKTLQQQFPQRAIIIELVWDPIWTPDRISEEGKSLLERE
>NZ_CP019158.1|WP_075991507.1|1938055_1939318_+|hypothetical-protein
MAHIAIHKSPEAYAVLPFFITAGIFFLLFSFLLVFSGGQLFGHHFQPKVLAIVHSLALGWGTMVIYGAAYQLVPVIFERSLRSSKLAFFSYILLTSGTCVLIYSFWYFKIGLLMCVGGLLITLSSYLYFYLLWMTTKDVEHLFELRLYFTFSAFWLCFTTTLGLLLAINLAHGFLTKSHLDILKLHAHVGIVGWFLQLILGAGAKMLPMFLLGQSTKTKWLYVSVILINLGLVLFLLDGYSHPVGLRSLTFGAIVLLGVVCWAVFVVDCFVHRARKVLDIPMKHSFISFLSLLFAFLTLPMVVRQESGNWVNLYAVWVFFGWLTGIILGMTYKTLPFMIWNWRYKDLNGIKKIPLPKELYSQRLLSIQYYLYLVALVVMAVAVAGRFRWALYCAAWLWAALAAVYVVNVGKVVFHQRKSK
>NZ_CP019158.1|WP_075991506.1|1937226_1938054_+|DUF2249-domain-containing-protein
MRINQHTKISELISYNDLSIEAIAAIAKPLRKIRIPVLRRILAPRVSIGEAAKIGGCSVADFRAALVPLGFIWMSDGAEKVNDPFDAAERPSWMDDAAVTVVFDVRPLLEMGQDPLKDIFQLYRSLVAGGILCISNSFVPIPLIRRMEERGVPSYSHEWAEGEFRSYFYKKDTVLSVQPAEGDHISFVPKRLFEQKLARLSALQLVTLDVRTLPMPQPMESILEALAQLKADEVVYVKHRKVPLHLLEELDHFSYRIFIHEQHPGDVHLLIYPVK
>NZ_CP019158.1|WP_075991505.1|1936285_1937212_+|iron-sulfur-cluster-repair-di-iron-protein
MIKSPLLEVFNIEPRLKHPTIFDHFDALDSGESFIIKNDHDPKPLYYQLLGERGKDLIWNYLESGPEYWQVRLGKPLESETLETVGHIAAKDIRKAEVLKQLGVDFCCGGKQTLKEAAHSVGLDEIELRRRLNQSEELPIAGPPLNFKDWDIDFLSDYIKNVHHRYVREKGPIIQELAHKVADVHAQQHPELVNLSKELDAFLDDLYHHLDKEEKQLFPATKNEQELTSKQVEQLIQFLISEHEDSGKELQQLRKITQNYTLPANACNSYTSLFSQIESFESDLLQHIHLENNILFPKLLASYGVQMN
>NZ_CP019158.1|WP_075991504.1|1935488_1936256_+|ABC-transporter-permease-subunit
MNKIIRYVFVDLLRNKTILCYTILLFVLSMTVYSMEDNYEKGLLSLLNIVLFVVPLMSIIFSGIYIYQSSEFINCLVSQPLQRQSIWGSLYVGLAGALSLAFFIGVGIPTFIYAFSSSGITLVGCGLLLSLIFVSIAMWTSVLIRDKSKGIGLAILLWLYFTLLFDALVLFILFQFADYPIEHGMVALSMLNPIDICRILILLQVDLSAMMGYTGAIFRDFFGNTFGIATTLLVMLLWCLIPLGLSIRYFKKKDL
>NZ_CP019158.1|WP_075991503.1|1934767_1935481_+|ABC-transporter-ATP-binding-protein
MISIQQLTKSFGKFNALKGIDLTLNGGECVALIGPNGSGKTTLIKSVLGMVMPSAGRITFEGQDIGQQWAYRNHIGYMPQIGQYPENMSIKQVLDMIKDIRKQPQTDSDLYQAFGVDKLLEKRMATLSGGTRQKVSACIAFMFDPKVLILDEPTAGLDPLSTEILKDKIKKEIGRGKLIIISSHVLSDLDEFVSQIVFLQEGELKFHKSLQQLKEDTGTEKLSKAIAYLMQNRDLSN
>NZ_CP019158.1|WP_075991512.1|1945121_1945661_+|hypothetical-protein
MESKEYLIELLKEKYHYELGRRDKFEDNLSLPVTVLGLIIAGLFYVINEVYSDTLSPCSKATFIGMIGSMLIIIIGAILSLVYVFFGFKREYCTFPESKAILERYQEIKAYSAKHKEDNSFITSSLKEDTIKWYSDCNENNTRTNDRRANAFHTFKMLFSIIIILGVLLMFLVFYLKVN
>NZ_CP019158.1|WP_075991513.1|1945860_1950087_-|hypothetical-protein
MIKKGLEFELIALEFLERIFIELGYTITRRRNQKTGTQDGYDLLIEIVTSKYKSYTVYAECKDYNSNLSYTLALEKIPHIISTHKTIDLLLFVSPFEDFKNPNEPSKLEKFYDKIAPECPVQFLTPEYHIKEFFSLYPDLFKKVYDGDIGQVIEKERQLLLNKFDKLIFSDRNLAKIIIEETDKHIYISSIQQQPFHMERSFRTAPLRDPYLWSNPENTLEIDTLISSSQNGVVILGNPGSGKTTELNFMAVSLWDERNSNEIIPYFKSLKNFNSNSTISEILPNRYEKIPFLLVVLDGLDEVYDVTDFSNKLRSFIDSKKVSPRKNNIKFIISCRTSIYNKIVKNLDGFTEAYLNPIVDGQAIRFLRDKFGIDFINEHRKFNFWKYADLLETPFYLELIGENYLKTGVIEISRSKLISQYIKNRLDHDEKDKFRNTNYSEGLHLEQARKLAFAMETMQITSIEDSKARAILGEIDTLAKNPFIEQSIDKKWSFELKSVQEYFVAQILTQMDIDQLLDLIKIDDKICKVHPAWYNVVTLLLNMEFEQVNAYEKLINWLIKNDIEMVFQADTELVSDEIRNTVLQKYFQDHCIEKTLWVSDDGTLGTFSDTLPNIEYLFDKAMSKELNLRTRQSAIILLNHMSLSNKDNATKLESLLFQIMNEFQDNEVDFLQIMERTIALIKRVDNDKKEKLIEQIKSFVSIYDYKEFVNQVINLTNENNFDRHQDFILHILKKSINEISWNKKSKYGSVISTKEKIFTLFSQIKDNEALIYLLEFILKRIGNHKLREKYVAKFIKHCSSIIRPATKSYGEKLTEIICDVITTDRIYHLEQDLLASLAKDCLVDEGLFKKLIALETENNSNIYFLETILKAEYYAHIVDVYKNGVLEDLFLIKVRNTMQYDCFEKAIQFEKFIEDNTRFIFPDRIEQSTVQDEIAFNRSSIQREFDVKFDLPLLKKQMENIFLHYNTSSLSFEEVDRFWDEYYDIIELKKNISEYAKHFLWKILREDYRADQKLKIEDLDKVLENRRLDRFEDIYQTLSENNELSIVVQDFQKKHIESWIIDIKPMIECFLDNPESRITSNELRTINSFLNFVRYLKFSGFEESFLLQLIDFSKYTLFDFDFIDEILGTEKVVLKVLEELKSISDLEIKLPFLAYLRSKEISFDKDEYGIEEDLKNSILGKNYDCARKVVELCYIDNPPILKSVANLYLEKDEDYYFLPFILNTLSDLREYDFIRNFITDNYQLLIDKKLLDEPTAVRHLVKTNGEFAFIKLKAYIIAKTKNAGDTYYDLEYQNYSNPNSIRTLLEIIKHCLSLPDLDNIFNGWFKPITKISEVFVCIGKKNGLETSKYILKGLEDIVPFDDPKNNNRFYHERLKNDITDVIYKLTSTPYTFQRAMQFNREHEYIFFN
>NZ_CP019158.1|WP_075991514.1|1950129_1952475_-|restriction-endonuclease
MNYNLEVLNDKEFESMSKDLLEKILGVRLQNFKTGKDDGIDLRYSTYNINEIIIQAKAYTKSTYSNLKSTLKKEKEKMSMLSPQPQRYILTTTCHLSPKQVDDIINIMHPFIKSAQDIYGRDRIESLISDHHDIEKKYYKLWLTSTNVLKAILHNGQRSQSDFHQTKILKNASLYVPTKNLQNAIDKLNENKFVIISGEPGVGKTTLAYILICDLLGKGYELINIDEKISDALHLLSEDPETKQVLFFDDFLGANINAILNPKNTENKIISLIEQIESSKNKFLILTSRTTILNQAKDNYEHFARQKFDKRSKYELVLNNYTLLDKAKIVYNHLYFNNMGDEYKIHFFENKSYLKIIEHKNYFPRLIEFITDQKNYDHEYYTTVDEFIFKNLDNPREIWKVAFERQLEDEDRFLLLSLFSFAKTRVRHDELEHAFNCRYNYEIRENGIHKKLDPFNRSLKKLLGSFASSIKTKDGTNEYQLLNPSIADFLINYLKKSKEERNRVIFSISSPNQLLGYFDRTRKDKIILDDYFIKEYYPTFVNCLNNVMNKHYGHVIFDIIYCLDQFFSPKTINDTNIFIKYFNDLLNLGYEAYVFSPRLITILKSVKSCYPENIIKIVTDNWNLLMFLVIKNAYESDHLSEVRELHELYEIDLFKTISVQEIKEELTLKINSLFDEYVKDYELVVSDNDVLKTYHDTDETYTRSYINDKYCESYDSFFSDCGLIDFYENFNHDLDIDSYSLLHKILDRYSYEEDDYSSEITHDIDYSRNEEIQMIEDLFEK
>NZ_CP019158.1|WP_075991515.1|1952621_1954451_-|ATP-dependent-helicase
MLQINLSPKQQEIVELNEGAFLILASAGSGKTRVLTERIKRLSDSSYGKILAITFTNQAAAEIRERLGTSDIIKKNVFVGTFHNFCQSILELRFKLLGYSKMPHIFEDDADRIELIKQAIKSVPYFDSIYNDLDPKKKNEYTYNALQFISTVKREILSAEELAENSENNEYQYLYETYQDILKSNNAIDFDDIIRLVYELFTNNESVANLYRKSYSHICIDECQDLNKLQYFLLKSLCGNMIKNIMMVGDPNQSIYGFNGSSSSFMQKDFVNEFQAIKIVLDENYRCSKSVIEASNILMNLKIEAVNYVIPGVFEIYQASSEHDEAKFVLTKINELLDLKSHRDIEGNIDVDKISILGRNKFVFKHIEELLTNEGLPFYYKSSNTGIKFSSNAMKIFDLFFRIKINPLDKLHQKRLEDILKVRDVNNIEELKSSNFPIASNIKNILDSIVMDNIHLKIGELRNIFQEANLEDDEKKRTIDELVDFSNQLTQYKKQNLKPTLEGFKSALALGLMNISTNKEIGICLSTVHTMKGQESEIVFLIGVDDGTFPDYRSVNKGGEELQQEKNNTYVAFTRAKRFLYVSYPKKRLMPWGDTKVRTISRFLRNLVN
>NZ_CP019158.1|WP_075991516.1|1954738_1956292_-|AAA-family-ATPase
MAIQLKQLRVHGFRGLDNIEIDFEPTTVLVGTNNAGKTTLLKSLQLALSNTLQITDDDFHFSDAVIRNKIIVDVLFISNNDDGEHIAEFEDKWATVFTTDRIGIDENGYQFLAFRTVIEENLIRKTYKKKQCIIDEWVPFCDEADEYWYMKEYPNELSFYFDEIPFFYLDANRDILDDLKNKTSFLGKILSSITYNNDDKNLIETLIRDLNKETIERSEVLTNLHTTLTELDTAMDNPQNTVDIAPFTKKIRDLNKGVKINYSQFSMEYHGMGTRSWSSLLILKAFILQNKKLADDNEVAYYPIIAIEEPESHLHPNAQKKLYSQINDIVGQKIISTHSAYIAGSAKLKEVRSVIKSATITKIGKIDEAELTSEEIRKIYRQVINTRGELYFSKVVILCEGETEEQTLPLLIKKHFRKSTIELGIDIVGIDGGGNYFPFIHFAEKHNLKWFILSDGEANIIKKLKKDYKKLSGSGANINDIILPSNIIHFDDENDFESYLTNNGFVEEIENCLKKNP
>NZ_CP019158.1|WP_075991517.1|1956436_1956880_-|helix-turn-helix-transcriptional-regulator
MGVAFQEEKIHEGKNLKRIREIMGIKQEALGQKCESKFDQRRISEFENSWTISEPALKELADALGVTVEFIRAFNEEKAIYYIQHNQDSSKQNSLNHFPKITYESDNKLEALLEKLVQDDEVKTQAILDLTKVVADLADEVRKLKGK
>NZ_CP019158.1|WP_157625954.1|1957553_1957928_+|hypothetical-protein
MKRILAMQFAFDWFIYEVHKVDYSPINEIEAFWNHYALETVSANILQLLSTYLDGGLGENRLLKDEEMQEFATALYRVLIAYNVANYRNIDLRKMQLSAEAEERIGKELELSKKVAEFFSRLSK
>NZ_CP019158.1|WP_172840656.1|1958054_1960079_+|TlpA-family-protein-disulfide-reductase
MRKKIRQGKTYFKGTSILLKKRCEISAQNLLEKADSSGSLRLFFECPSTLRRTSVASSSGTPRLLFDCASGRSRSVLEALPKPSRKGAKPVSNMSRRSLEAESKASRRGGKASPSSDFCLTNFAPTSAFHAVGLEFSSGSHRATPIKTRCGLDENPMKCKNSAGIAQKMVEDFQQVGDARLTYGVESERSVLRFFKSICKALVFQANTLLGLLGPVVQRALKYFLFVADYKRAYLMILTCLFLCLVSMFSLPAQTPRKDSGADGLSSLAALKPGDKIPDAVWNQPLELNYFNGKKKTIKFADLKGKLILLDFWSTGCPSCIEGIPKMEWIQQRFTGNIQIIMVNSKRNKDTAKRIKTRFEKFKADFNFTPSLPTVLDDTIFTALFAHNTLPALAVVDTYGVFIAMTSSHSLTDKNIQALLDGNAVLKNEGNYKNLTRSAAEPLLDTVGVHYISAFGGYRNHYLPVYPNLNHKNGTTFLQMGNQSLQFMLFQAYGQALKGFRQNDLVIDARLGRQFKEKLLNVNSTQNKYWYQFYTDDSVSRPQFADIFCREFQNYFKIAVARKSDSIELYKIRFSDKIKTILTSGKASIARFQGIGEEAFYQNIPIGLFLQNLFYAFDLPTELKEKENFNIDITIPAGFVRWTEQEKLTFLNERGIVFSAVKEYRSYPLVYPIY
>NZ_CP019158.1|WP_075991520.1|1960088_1963307_+|SusC/RagA-family-TonB-linked-outer-membrane-protein
MKVGLLTLLCSVSILLGKAQQMQRMEVKGRVLNSTDRSPVPNANIRVMNKQQVTRTDGKGQFALIGVVDRDSLAVSSVGYHSRTVAGGYFRDNAVILLQKEENYLQEVQVNTGYQTLRANEVTGAINVISRKMLDQQVGTNILQRLNNVVPAIRFDNQPIKNAMQQKLNVSVRGLSTINGNLDPLIVLDGFIYEGDITNIDPAMIESATVLKDAAASAIWGARAGNGVIVLTTKKGMIGTNTRNKITFGSTMIVKDRPNLSQLYQVPNADFIAIEKMLFDGGHYDVFLQSFPYVAMTPVIDILDRTKNGKISSLDSTEAINNLLAQDGLKNYSDAFYRSPMSMQYNLHIAGGNAKNSYGLGLGYTKTTTELDSRNRKWNLLFSNSYRPIANLQVDLNVNYTDHRDQSGRPDYSSLSYGSKSVPYMQFFDNDGKEISFDGDFRRSYLDQNFGANYLDWSYYPLSEYNYSKTTKNLTELFASAGISYQILPYLKLTASGQYQKQASKSEFLSEMESYSARLLINKFTQVDPVTGKVSYPVPRAGINKIGESEGQSYTLRSQLNLDKRLSAHYLIGIFGAEMRQNTQSGAAYTVYGYNSIPLTSQAVDFINLYRTSPDALLQTIGGSPDFTKTVNRFVSTYINFSDIWKEKYAISFSFRQDGANIFGANTNDKWSPLWSVGGFWDLGKEQFMELSWLNNLKLRATFGYSGNVDLTRTPEPIANIETARYTNYPMLNIRNLNDPSLRWEKVGTFNLGLDYALFKNRISGSVDYYVKNGKDLYGTTDYDYTTWGAQATVVKNVGAMRGHGLDLALNSINTINRLKWSTRLVLSLNKNKTTAYYRSVNQGLGNFLGNGNGITPIVGRPLNAIAAYRWAGLNEQGQPQGYLNGEVSTEYLKIRNASLQSASDSESIVFIGSSKPQLFGNLINTFAWKAFSMSFNMSFKADYYFQKPSTSYYSLFEQGVAYPDFENRWMKPGDEKQTSMPKMEYPINDNLSTFYTQSEIHVLKGDHIRLEYINAAWEHRLPGKNEMKFRLYGNIANLGVIWRTNRKHIDPEFAYRLTPPKTFSLGIQIDY
>NZ_CP019158.1|WP_075991521.1|1963310_1964663_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKTIIISITLGFATLIFGACDKYLDVQSNNKLVVPKELDDLQKLLDNVRVMNNNFCSRGEKACDDYFIPESNYKALNDVEKLDYIWEDSQYNFSNDWSSMYNVVYIANLVLERLDKIDRNEQNAAKWDGIKGAALFFRANSYLSLLWTYAKAYQQNAAETDLGIVLRETSDFNVKSVRASVEDSYKKVITDLETSISLLPLESDHVVQPSKPAVYGVLARAYLSMRQYDLALKYVELYLERRNELLDYNNSNEVKLTATFPFSLFNKETTFYMELKATILSNAYSNIDSVLYRSYDSNDLRKQAYFKVLNNVINFKGQYSGSTLLFGGVATDEIYLIRAECLARAGELIEAQADLNKLLATRYKAGTYKPYLLTEAGEVLKVILSERRKELVYRGVRWMDIKRLNLEGQEIVLKRVVDGKEYRLLPNENRYALPLPADIVRIAGIPQNPR

Crispr_ID: NZ_CP019158_2

• CRISPR_ID: NZ_CP019158_2
• CRISPR_location: 5593617-5593737
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP019158_2

Consensus_repeat	Method
GAGACAAAACAGTTTATCAGAAGGTGTTATTTTTTTATTA	CRISPRCasFinder

spacers of NZ_CP019158_2

>2.1|5593657|41|NZ_CP019158|CRISPRCasFinder
AGCATCTGAAGCGGAGCGTTCAACTAACAGACTCACTTAGA

CRISPR arrays and Neighbor proteins around NZ_CP019158_2

CRISPR arrays

The CRISPR arrays of NZ_CP019158_2

>merge|NZ_CP019158|2|5593617-5593737|CRISPRCasFinder
GAGACAAAACAGTTTATCAGAAGGTGTTATTTTTTTATTAAGCATCTGAAGCGGAGCGTTCAACTAACAGACTCACTTAGAAGAGAAAAACAGTTTATCAGAAGGTGTTATTTTTTTATTA

>NZ_CP019158|2|1|5593617-5593737|CRISPRCasFinder
GAGACAAAACAGTTTATCAGAAGGTGTTATTTTTTTATTA	AGCATCTGAAGCGGAGCGTTCAACTAACAGACTCACTTAGA
AGAGAAAAACAGTTTATCAGAAGGTGTTATTTTTTTATTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019158.1|WP_075994093.1|5598372_5598978_+|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl|CDD|376450
NZ_CP019158.1|WP_075994092.1|5596069_5598253_+|S9-family-peptidase	unknown	unknown	gnl|CDD|366374
NZ_CP019158.1|WP_075994089.1|5592941_5593385_-|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|223149
NZ_CP019158.1|WP_075994091.1|5594634_5595003_-|dihydroneopterin-aldolase	unknown	unknown	gnl|CDD|376737
NZ_CP019158.1|WP_075994084.1|5588456_5589269_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187602
NZ_CP019158.1|WP_075994969.1|5598974_5599943_-|polysaccharide-deacetylase	unknown	unknown	gnl|CDD|200585
NZ_CP019158.1|WP_075994083.1|5587826_5588420_+|polyisoprenoid-binding-protein	unknown	unknown	gnl|CDD|225228
NZ_CP019158.1|WP_075994970.1|5604474_5604936_+|VOC-family-protein	unknown	unknown	gnl|CDD|319899
NZ_CP019158.1|WP_075994967.1|5587134_5587722_+|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_CP019158.1|WP_075994081.1|5585940_5586342_+|DUF1634-domain-containing-protein	unknown	unknown	gnl|CDD|377927
NZ_CP019158.1|WP_075994085.1|5589346_5590999_-|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl|CDD|223733
NZ_CP019158.1|WP_075994095.1|5601797_5603486_-|asparagine-synthase-B	unknown	unknown	gnl|CDD|236513
NZ_CP019158.1|WP_075994094.1|5599945_5601514_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349937
NZ_CP019158.1|WP_075994088.1|5592345_5592783_+|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|223894
NZ_CP019158.1|WP_075994082.1|5586349_5586889_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112
NZ_CP019158.1|WP_075994090.1|5593845_5594556_-|ATP-binding-protein	unknown	unknown	gnl|CDD|365803
NZ_CP019158.1|WP_075994087.1|5591724_5592228_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|274357
NZ_CP019158.1|WP_075994086.1|5591093_5591735_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019158.1|WP_075994096.1|5603721_5604297_+|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_CP019158.1|WP_083663847.1|5595075_5595804_+|DUF1080-domain-containing-protein	unknown	unknown	gnl|CDD|368908

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019158.1|WP_075994093.1|5598372_5598978_+|CDP-alcohol-phosphatidyltransferase-family-protein	gnl|CDD|376450	pfam01066, CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase. All of these members have the ability to catalyze the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond.	2.68389e-05
NZ_CP019158.1|WP_075994092.1|5596069_5598253_+|S9-family-peptidase	gnl|CDD|366374	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region. This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry.	8.13016e-60
NZ_CP019158.1|WP_075994089.1|5592941_5593385_-|Hsp20/alpha-crystallin-family-protein	gnl|CDD|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	4.89156e-27
NZ_CP019158.1|WP_075994091.1|5594634_5595003_-|dihydroneopterin-aldolase	gnl|CDD|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	1.92982e-21
NZ_CP019158.1|WP_075994084.1|5588456_5589269_-|SDR-family-oxidoreductase	gnl|CDD|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	2.8353e-90
NZ_CP019158.1|WP_075994969.1|5598974_5599943_-|polysaccharide-deacetylase	gnl|CDD|200585	cd10963, CE4_RC0012_like, Putative catalytic NodB homology domain of uncharacterized protein RC0012 from Rickettsia conorii and its bacterial homologs. This family contains an uncharacterized protein RC0012 from Rickettsia conorii and its bacterial homologs. Although their biochemical properties remain to be determined, members in this family seems to be composed of a seven-stranded barrel with detectable sequence similarity to the six-stranded barrel rhizobial NodB-like proteins, which remove N-linked or O-linked acetyl groups from cell wall polysaccharides and belong to the larger carbohydrate esterase 4 (CE4) superfamily.	2.15722e-92
NZ_CP019158.1|WP_075994083.1|5587826_5588420_+|polyisoprenoid-binding-protein	gnl|CDD|225228	COG2353, COG2353, Uncharacterized conserved protein [Function unknown].	5.37696e-47
NZ_CP019158.1|WP_075994970.1|5604474_5604936_+|VOC-family-protein	gnl|CDD|319899	cd06588, PhnB_like, Escherichia coli PhnB and similar proteins. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to bleomycin resistance proteins, glyoxalase I, and type I extradiol dioxygenases.	9.42324e-32
NZ_CP019158.1|WP_075994967.1|5587134_5587722_+|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	7.31083e-20
NZ_CP019158.1|WP_075994081.1|5585940_5586342_+|DUF1634-domain-containing-protein	gnl|CDD|377927	pfam07843, DUF1634, Protein of unknown function (DUF1634). This family contains many hypothetical bacterial and archaeal proteins. A few members of this family are annotated as being putative transmembrane proteins, and the region in question in fact contains many hydrophobic residues.	3.1072e-23
NZ_CP019158.1|WP_075994085.1|5589346_5590999_-|AarF/ABC1/UbiB-kinase-family-protein	gnl|CDD|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.12189e-118
NZ_CP019158.1|WP_075994094.1|5599945_5601514_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|349937	cd08015, M28_like, M28 Zn-peptidase-like; uncharacterized subfamily. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions.	5.1564e-87
NZ_CP019158.1|WP_075994088.1|5592345_5592783_+|acyl-CoA-thioesterase	gnl|CDD|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	2.15472e-21
NZ_CP019158.1|WP_075994082.1|5586349_5586889_-|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.10123e-15
NZ_CP019158.1|WP_075994090.1|5593845_5594556_-|ATP-binding-protein	gnl|CDD|365803	pfam00004, AAA, ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.	6.06055e-31
NZ_CP019158.1|WP_075994087.1|5591724_5592228_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	6.52922e-23
NZ_CP019158.1|WP_075994095.1|5601797_5603486_-|asparagine-synthase-B	gnl|CDD|236513	PRK09431, asnB, asparagine synthetase B; Provisional.	0
NZ_CP019158.1|WP_075994096.1|5603721_5604297_+|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.12583e-18
NZ_CP019158.1|WP_083663847.1|5595075_5595804_+|DUF1080-domain-containing-protein	gnl|CDD|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	9.61372e-48

Protein sequences

>NZ_CP019158.1|WP_075994089.1|5592941_5593385_-|Hsp20/alpha-crystallin-family-protein
MALIKFPTKSLNTDAVNPFVNTVFDNLFNDNFISDRLVSRVPAVNISESEKSFKVEMAAPGLDKSDFKINVDKNLITISAEKKEESVSEEKLYSKKEFNYSSFSRSFTLPETVDYSNIEAAYEGGILILTVGKKEDAIIAKRLIEVK
>NZ_CP019158.1|WP_075994088.1|5592345_5592783_+|acyl-CoA-thioesterase
MENIFYQGQIIWAQIDANRHMRHSAYADICAQARSNMLNKMGFSLDKFAEFHIGPILFREELIYFKEVHLDEYVQVKVELTKYNKTNSRFSFIHQVFRNDGVLCCTVNVDGAWLDLQKRKLTKLPEEMEPYLARIPRSENYTETE
>NZ_CP019158.1|WP_075994087.1|5591724_5592228_-|sigma-70-family-RNA-polymerase-sigma-factor
MNPSEIEFLRLIDENKGILVKVSRMYMDDHEGRQDLYQEIVYQLWKSYATFKQQSKFSTWMYRVALNTAMVFLKKEKKHQIYDALEERHDFAEEAYDTDKDEQLKVFYQAVQELNAIEKALIFLFLEGQSHREIAENLGISEVNARVKLNRTKERIQQIIKKYKYEF
>NZ_CP019158.1|WP_075994086.1|5591093_5591735_-|hypothetical-protein
MNFDELKKSWQEQPTDEDLQNPNLKYYKEVGNIMGKLRKNIKREFISWVVCMGFLFLVPILPMYKIEGYAAFAYYFFIVQISLSSLLYYRRFFYLVKSTKKIELLASKEHLLKLYYDLKYAVETYRIAAYVMIPQALFLYLIMIAQNKTTVWFDRLYHFKETFQEEPNFIVWMILSAIVSIVLVVGLTEIMIRCYYSRYIAEIKEKLDQMETE
>NZ_CP019158.1|WP_075994085.1|5589346_5590999_-|AarF/ABC1/UbiB-kinase-family-protein
MYNPTKKLQRSSQILSILAKYGFKDAIARLPWKGPRSAVEHPIDVDEISVYTRIRMALEELGPAFIKLGQSASTREGLLPKELVEELKRLEDNVPPFEVDIKSYLKEELELDIEAHFQEIAAEPFAAASIAQVYRATLKDGTPVVLKVRRPGIDEVMRCDLALMRDIAKILTMYNDVLENLNLLLIVESFATTMQEEMSLVIERHNIERFTKNFKGNKLIKVPRVFPELSSDRVLCMEYLDGFKVTDAVEIKRRGMDVQTLVKNGINLYLEQVIIHGFFHGDPHPGNMMVMPDGRIAFLDFGNMGKLLGIDRRQLEEFIQSAISEDAVRLADVIEDVAVVSHIPDRNRFERSLYEIFDMIDNVSLGDLSLDLLFNKLWNIIGDNRLYFPEYIYQLMRGISLMEGIGRQLYPDLNIMESIKPFARRIMMERLSPEAIFKKGKHKVESFARDVEKLPEDMRALVRLFRTGNFTLNHRLISARSFNAILRKGVNRIVIGIMFMSLNLLGGMIIVARVEPQWWGIPIFAWICLGSAWVFAIYLFIAMIRAKDND
>NZ_CP019158.1|WP_075994084.1|5588456_5589269_-|SDR-family-oxidoreductase
MEINLNGKKALIGASSAGIGAGIAQVLASCGVSVTLASRHEEKLQRTCESLDTSKGQVHQYILVDYNNHEAYKKQIAHYFESNKVDILINNSNGPQSGTIDQKNLADYQHAFELLFQNHCYTTSCALPYMLANRYGRIINVSSSTVKEPVSNLVLSNTIRTALISWSKSLAEDVAKDGVTVNSILTGLFDTDRIQSLTNLDAQRLGISYEEALQLRLKQVPAQRLGKPEEYGYLVAFLCSEYAGYLTGTNIPLDGGMLKRLIKKWLSYIK
>NZ_CP019158.1|WP_075994083.1|5587826_5588420_+|polyisoprenoid-binding-protein
MNKFFQILAAAVLMVNAAVAQVKWSADPAHTNARFDVKHLGISFVDGEFTKVEGTVETATGTSFNNAKVNFAIDVNSIDTRIAARDNHLKTDDFFAAEKFPKMTLKSISFKNAKVKGKYVMVADLTIRDVTKKVTFDVTQNGGIITDPWGKTRAGFTAKTKINRQDFGIKYNDKLPSGVEAVASDVDIIVNTELVLN
>NZ_CP019158.1|WP_075994967.1|5587134_5587722_+|Crp/Fnr-family-transcriptional-regulator
MEQFKEFVKQRIDVTEEELNDIVSRYQVRKIKKKEYFLRAGEVCHHEAYVISGLFKSFYVTADGIEHILQFAIEDWWIGDIASFNYQEPALQNIQALENSVVLTLSKKNKDKLYEDHPIFEKLSRIMAQRAQIASQHRIISSIGFTAQERYLDFIKRYPKIYPRISNMQLASYLGVTQEFLSRLKRQILKPNRNS
>NZ_CP019158.1|WP_075994082.1|5586349_5586889_-|GNAT-family-N-acetyltransferase
MKFVAPNTLENDKVVLRIMEPADFDTLYQVAKDPLIWEQHPNKDRWKEDVFRLFFEGALASKSAYLILDKVSGACIGSTRYYGLDEAEKSIFVGYTFYARAYWGAGINPLVKEMMFDFAFNFVDRIYLHVGAENYRSQTAVERLGAIKVAEKMVSYVNEPERKNFEYALEKSAWRRIKR
>NZ_CP019158.1|WP_075994081.1|5585940_5586342_+|DUF1634-domain-containing-protein
MKQVFSKHYWGDKDISLLVGQILRIGVILASSILILGGIFYLIVHGQDTVPNYRDFVGEGNSNTTMTGIITGAFSRNIPQVIQLGVLLLICTPIVRVIGSLLGFIIEKDRLYIIITLIVLTVIIGSILSGVKG
>NZ_CP019158.1|WP_075994090.1|5593845_5594556_-|ATP-binding-protein
MNIYDLVIADKERIALEDVFLEEESRQKLHQLIKEHRYIKELSQYGLPVSNKILLHGYSGCGKTTTAKALATALEKPIYVLNLSNLISSRIGETSQHIKQVFDKAGREKAVLFLDEFDQIGKARISEEKDVGEMRRLVNTIIQLIDYFPAEAVLIAATNHPEILDTAIIRRFQLRLAFELPTMVQLDAYYDKLFRPFPHYADVVPRRYGISYAEAKDYIYDAVKFLLIAALEQNQP
>NZ_CP019158.1|WP_075994091.1|5594634_5595003_-|dihydroneopterin-aldolase
MATILQTVSLKEARFYAPIGYYEEEQVLGNEFFVSIDVCFPFLNTETENLKNTLNYEELYQITASVMQPKRKLLESAASEILDQIREKVSHALTIEVVIRKSNPPFGGDLSCSQVGLKYFKD
>NZ_CP019158.1|WP_083663847.1|5595075_5595804_+|DUF1080-domain-containing-protein
MNFFLSSALATTLLFGATALQAQTNMKASDTEYYSPVPPTLTIDHGIPSDAIVLFDGKDLSKWKSEKGKANWTVANNVLEVKPGAGAIETNEHFSDFQLHVEWKSPEVIKGEGQGRGNSGIFLQGHYEIQVLDNNNNPTYVNGGAGSLYKQRPPLAQVIAPDKWHVYDIIYKAPQFSKDGILTAKGTVTVLHNGVVVQNNTQIDGTTEYIGLPKQISHGPGPIILQDHGDLVQFRNIWLRKL
>NZ_CP019158.1|WP_075994092.1|5596069_5598253_+|S9-family-peptidase
MKRIALFFLLASSISSYAQRNLNLEETVFGPRTYAPTSIAGVSWIPKSNNLSYLDKSYQNLLSKSASNNWSETNLASKTDLEKALKTAIPNETFNLRVFPYDYKWRDGNVLLLQVEGKDKTYTVAYNIKSKNIESFIGNDNKGANREISSDFSKIAYLVDNNIAIVDKNGKITAVTNDTDKGIVNGSDYTHRQEFGIKKGMWWNNQNDKLLYYHKDETMVANYPLPQWSPKIADIKWIKYPMTGQKSEEVSLIVYNTTTGQKVTLQTGEHSEQYLTMVTWDPSGKYIYVGVLNRGQNDLKVNKYNAENGSFVKTLFEETATTWVEPENPLTFLPNKPDQFLYQSDKEGYNQLYLYNTEGNLIKKLGYKDIVMEAFLDFSADGNKVSYTGVTNNGLDRQLFEVDLKSGKTVQLTNESGIHHAALSGDGKYIYDQYSNLKTPNKVQIKEVKSAKETTLVNAENPFAGKINEPKIEFVQLTSADGKYPLTGRIIYPNDFDPAKKYPVMYYLYGGSHSQLVSNKWLGGAGYFDMYMAQQGYIVFTMDNRGTNYRGRDFYTATHRNLGQNEMADQMKGIEFLKSKSFVDQQRMGIFGWSFGGFMTTSFMLHHNDIFKAAVAGGPVIDWKFYEVMYGERYMDTPQENPEGYKLTSLLNKADQLKGRLLIIHGAQDPVVVQQNSMEFLEACIKAGKQVDYFLYPTHEHNVMGKDRIHMYEKIADYFNQHLKNPS
>NZ_CP019158.1|WP_075994093.1|5598372_5598978_+|CDP-alcohol-phosphatidyltransferase-family-protein
MKKNIPFALIILRLVLGLLLLLFYWLKVDHFKWYAISFLIIGLLSDIFDGIIARRLAVSTTLLRRWDSSVDLLFFACISLVSYLSCPQFFKDNATLILILVGSEIVTYIISFAKFKKEIATHSIGAKIWTLFLFALLVELLLHCQSTILFQLTVWLGLLTRLEIIAIILTLKNWSNDIPSIYYAIQLRKGKAILKNKLFNS
>NZ_CP019158.1|WP_075994969.1|5598974_5599943_-|polysaccharide-deacetylase
MKQLIFVCLFLVCALFSYGQASFANLENYRTEWLILRENNNSLVGIRSFTKNAVKYYLTVDPTTLQTRVVGDRSVSVLYKDAAQVTKSLSGSVYESCFSLVRKTENNLQDAGLNFRLPKEAGINLTIDLCPSHKPLDKAIFEDLLVAFKGIDSTLPLAVSVSGKWMLNHAADLEWLKSLDTKGVKITWINHTYDHVFNNNPLTSNFLLSKNTNLNYEVLENEKLMLKNGLMPSVFFRCPGLVSDRNIIERLLSYGLIAVGSDAWLAKGQQAKNGSIVLIHGNGNEELGVQDFIQLLRTESQSIKTKHWTLYSLSESLDEESR
>NZ_CP019158.1|WP_075994094.1|5599945_5601514_-|M20/M25/M40-family-metallo-hydrolase
MKIDSMKHRGMKSLGLALLLLSAPTIFAQNKDAMVSSIVQEANANSQLEKYAFELVDMIGPRLVGSPQMQQAHDWVVKNYNALGAQARNEPYGEWRSWERGTSQVTMTYPRIKSLEGTQLAFSPMTKEKGIEAEVVAMPLFSSQSDFQSWLKRVKGKIVLIGMNPLSGRSDANWKESASPKGYEKYQTLKNDQLKKWETSMSYTGSTRRTIPLALENAGAVGVIDSYWTELPGITRIFDAKSKQIPVFNIGLEDYGLLYRMAEHGVKPRVSLQGNSKELGTSKTYNSIAEIKGKEKPDEYVVLSAHLDSWDGASGATDNATGVITMMEAVRILRKVYPENKRTILVGNWGSEEQGLNGSSAFVEDHPEIAKNIQVVWNQDNGTGRIVRIGGSGFEKSYEYISRWLQYLPEEFRNEIQTSFPGMPGTGGSDHSSFVQKGIPAFGLSSTSWDYGKVTWHTNRDTYDKIVFDEVKQNAIIVAILTYLACEEPTLVSREKIILPIDKDGKQTVWPTNLQSKRTSGN
>NZ_CP019158.1|WP_075994095.1|5601797_5603486_-|asparagine-synthase-B
MCGIIGAFELKQPASSLRSQVLEMSKRIRHRGPDWSGIFTGEKALLAHERLAIVDPKSGSQPLYSPDGKVVLAVNGEIYNHHELRNSLPDYAFSTQSDSEVVLALYLAKGPSFVDELNGIFGFALYDSRDDSFFVARDHMGIIPLYYGEDEQGQLFVASELKSLEGFCTTIEQFPPGHYLYSKAGKTPQRWYQRDWESYAVVKDNETDIAVLRKALEDAVHRQLMSDVPYGVLLSGGLDSSVIAAVTKKFASKRIESDDKEDAWYPQLHSFAVGLKGAPDLIAAQKAADHIGTIHHEINFTIQEGLDAIRDVIYHLETYDVTTVRASTPMYLLARVIKSMGIKMVLSGEGSDELFGGYLYFHKAPNAQEFHEETVRKLKKLYLYDCLRANKSLAAWGVEGRVPFLDKEFMDIAMRINPSDKMIREGRMEKWVVRKAFEDYLPESIAWRQKEQFSDGVGYSWIDTLKEQAENKVSDQEFAEASTRFPINTPKNKEEFLYRTIFESHFPSTAAAQTVPSVKSVACSTPEALAWDASFQHLNDPSGRAVASVHQESYEKSKVEAV
>NZ_CP019158.1|WP_075994096.1|5603721_5604297_+|Crp/Fnr-family-transcriptional-regulator
MDLIRTFYSELALTPQELTAITEKHEAITVKKGDFILTKGQVSNAYYLIEYGLTRSFLHDYEGNEVTIGFCSDNDVVIEVASFFQRNPTVENIQALMETRLWKIKFEDFQELFHQIPEFREWGRSWMAKELVHSKNRAIAMITEPATARYLRLIKEKPILIQQAPLKHIASYLGITDTSLSRIRKEIVHGN
>NZ_CP019158.1|WP_075994970.1|5604474_5604936_+|VOC-family-protein
MAKLHAYLNFNGNCEEAFNFYEKVFNTKNPGYMRYGDIPADPQMPPVPDEAKNKICHTAISINGDSMLMGADFIPAFGQQYIQGNNSYVMLMCESTTEAKTLYDALSTNAKAVEMPLGETFFAELYSAFQDQFGICWMVYFGGNKEEDCESKP

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	NZ_CP024110	Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence	67081-67110	6	0.8
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	NZ_CP024118	Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence	76894-76923	6	0.8
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	NZ_CP024108	Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence	38061-38090	6	0.8
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	NZ_CP024100	Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence	17363-17392	6	0.8
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	NZ_CP024115	Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence	25026-25055	6	0.8
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	NZ_CP024097	Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence	42221-42250	6	0.8
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	NZ_CP024110	Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence	67081-67110	6	0.8
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	NZ_CP024118	Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence	76894-76923	6	0.8
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	NZ_CP024108	Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence	38061-38090	6	0.8
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	NZ_CP024100	Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence	17363-17392	6	0.8
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	NZ_CP024115	Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence	25026-25055	6	0.8
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	NZ_CP024097	Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence	42221-42250	6	0.8
NZ_CP019158_1	1.6|1945006|30|NZ_CP019158|CRT	1945006-1945035	30	NZ_CP054057	Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence	22478-22507	6	0.8
NZ_CP019158_1	1.6|1945006|30|NZ_CP019158|CRT	1945006-1945035	30	NZ_CP014682	Kozakia baliensis strain NBRC 16680 plasmid pKB16680_1, complete sequence	20083-20112	6	0.8
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	KY389064	Staphylococcus phage phi879, complete genome	1681-1710	7	0.767
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	CP053919	Serratia marcescens strain LY1 plasmid unnamed1, complete sequence	67739-67768	7	0.767
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	36386-36415	7	0.767
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	KY389064	Staphylococcus phage phi879, complete genome	1681-1710	7	0.767
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	CP053919	Serratia marcescens strain LY1 plasmid unnamed1, complete sequence	67739-67768	7	0.767
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	36386-36415	7	0.767
NZ_CP019158_1	1.2|1944814|30|NZ_CP019158|CRT	1944814-1944843	30	NZ_CP054057	Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence	22478-22507	8	0.733
NZ_CP019158_1	1.3|1944862|30|NZ_CP019158|CRT	1944862-1944891	30	NZ_CP054057	Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence	22478-22507	8	0.733
NZ_CP019158_1	1.6|1945006|30|NZ_CP019158|CRT	1945006-1945035	30	MN180251	UNVERIFIED: Wolbachia phage WO isolate Seq2wOMel_KL2 genomic sequence	76011-76040	8	0.733
NZ_CP019158_1	1.6|1945006|30|NZ_CP019158|CRT	1945006-1945035	30	NC_013793	Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence	47752-47781	9	0.7

1. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to NZ_CP024110 (Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

2. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to NZ_CP024118 (Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

3. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to NZ_CP024108 (Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

4. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to NZ_CP024100 (Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

5. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to NZ_CP024115 (Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

6. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to NZ_CP024097 (Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

7. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to NZ_CP024110 (Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

8. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to NZ_CP024118 (Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

9. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to NZ_CP024108 (Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

10. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to NZ_CP024100 (Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

11. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to NZ_CP024115 (Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

12. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to NZ_CP024097 (Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence) position: , mismatch: 6, identity: 0.8

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
cagcaagtagaaagagaattagaagtggca	Protospacer
 ************** ** ****** *  *

13. spacer 1.6|1945006|30|NZ_CP019158|CRT matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 6, identity: 0.8

gaactaggaaaaagataagtagaagagctt	CRISPR spacer
gcagcagcaaaaagataagtagaagagccc	Protospacer
* * .** ********************..

14. spacer 1.6|1945006|30|NZ_CP019158|CRT matches to NZ_CP014682 (Kozakia baliensis strain NBRC 16680 plasmid pKB16680_1, complete sequence) position: , mismatch: 6, identity: 0.8

gaactaggaaaaagataagtagaagagctt	CRISPR spacer
aagcaaggaaaaagataagtaaaagaccta	Protospacer
.*.* ****************.**** ** 

15. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to KY389064 (Staphylococcus phage phi879, complete genome) position: , mismatch: 7, identity: 0.767

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
gttttggtagaaagataagtagaacagcag	Protospacer
*  . .****************** ****.

16. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to CP053919 (Serratia marcescens strain LY1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
gagcaagtagaatgatgagtagaaatatta	Protospacer
************ ***.*******. .. *

17. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.767

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
aatcaagtaaaaagagaagtagaagactta	Protospacer
.* ******.***** ********** . *

18. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to KY389064 (Staphylococcus phage phi879, complete genome) position: , mismatch: 7, identity: 0.767

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
gttttggtagaaagataagtagaacagcag	Protospacer
*  . .****************** ****.

19. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to CP053919 (Serratia marcescens strain LY1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
gagcaagtagaatgatgagtagaaatatta	Protospacer
************ ***.*******. .. *

20. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 7, identity: 0.767

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
aatcaagtaaaaagagaagtagaagactta	Protospacer
.* ******.***** ********** . *

21. spacer 1.2|1944814|30|NZ_CP019158|CRT matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 8, identity: 0.733

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
gcagcagcaaaaagataagtagaagagccc	Protospacer
* .  **.*.******************  

22. spacer 1.3|1944862|30|NZ_CP019158|CRT matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 8, identity: 0.733

gagcaagtagaaagataagtagaagagcaa	CRISPR spacer
gcagcagcaaaaagataagtagaagagccc	Protospacer
* .  **.*.******************  

23. spacer 1.6|1945006|30|NZ_CP019158|CRT matches to MN180251 (UNVERIFIED: Wolbachia phage WO isolate Seq2wOMel_KL2 genomic sequence) position: , mismatch: 8, identity: 0.733

gaactaggaaaaagataagtagaagagctt	CRISPR spacer
gttagaggaaaaagataaggagaagaagct	Protospacer
*    ************** ******. .*

24. spacer 1.6|1945006|30|NZ_CP019158|CRT matches to NC_013793 (Bacillus pseudofirmus OF4 plasmid pBpOF4-02, complete sequence) position: , mismatch: 9, identity: 0.7

gaactaggaaaaagataagtagaagagctt	CRISPR spacer
tgttttttaaaaagaaaagtagaagagctc	Protospacer
 . .*   ******* *************.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	622441 : 631446	8	Enterobacteria_phage(28.57%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP019158|622441:631446|DBSCAN-SWA
TATGGAAATCGATTTTTCAACCTATAATATTCTCATTGTAGAGGATTCTGAGCTTAATCTTTTTGTATTAAAAGAGATCTTAGAACGTGAGCATTTTAACGTATTCTCTGCTTCTAGTGCTAAAGGAGCTTTTGAAAACTTGCGACTGCAAAGAATAGATCTTATTTTAATGGACGTCATGATGGGGGAAACGAACGGTTTTGATCTAACCAAGGAACTGAAATCCATGGAGCTGTATAAGCATATTCCAGTGTTATTTATTACGAACTTAAAATCTCCGGATGATGTTGTGCGTGGATTTGATAGTGGCGGTGTAGATTATATTCCGAAGCCTTTCAATAAAAAGGAATTACTTCAGCGCATCAAACATCAAATCAGGCTTATTGAATCGGGCCATACCATTGCGATGCAGACAGCACAGCTTCAGGAAGCGATATTAAACCGCGATAGAATGTATGCTATTCTTGCTCACGATCTACGAAGTCCGATTTCTTCACTCAAAATGATCTTAAATATTTTGACCATGAGTCCTGAGGGAAGTAATACTGGTTATGGAGATATGATCAATACAGGCAATGATATTGCGGAACAACTTTTCAGTGTTTTGGACAATCTACTTAAATGGACCAAAAACAGTCTGGGGGTGTTAAGCTATATGCCGCAGGAAATTGAGTTCGATGAAATGATCAAAGGTGTAGTGGAGACGCTCCAACCCACAGCTAAATTGAAAAATACCGAAATACAATTAAAGTTACAGCCCGGTCTGCAGATCTTTTTTGATGCGGACATTATGAAAAGTATCTTAAGAAATCTTTTAATTAATGCGGTGAAGTTTAGTCACGAAGATTCCCTGATCAAGCTCAATCTATATCGCAATGAAGATGATGCTGTCGTCGAATTTATTGATACTGGGGTGGGAATGAGTTTGGATGCACAGCGCCAATTAAAAGACCAGATAATGGAAGAGGGAAAGATTACCCCTATGCGGGAGAAAGGTAAAGGTTTAGGCTTATGGGTAGTTTATCATTTTATTCAGCGCAATGGAGGTACATTCTTTTTTGAGTCGGAAGAGCATGTAGGCTCCCGTTTCGGCTTTCGTGTTCCGTTGCTGCAAATAACATCTAATCAGTAATCTCGATATTATAAATTGATAATTTATGTATAACCTAAAAAAAAGAATATTAGTCTCTGGCGGAGCTGGATTTATAGGTTCCCATCTGTGTGAACGATTACTTAAAGATGGGCATGAAGTCATTTGTATGGATAATTTTTTTACAGGCGATAAATCGAATATTGTTCACCTGTTACAGAATCCATATTTTGAGCTTGTAAGGCATGACGTAACAGAACCTTTTTTAGCGGAGGTGGACGAAATATATAATCTGGCCTGTCCAGCAAGTCCGGTTCATTATCAATACAATCCGATTAAAACCATCAAAACATCGGTTATGGGGGCTATCAATATGCTTGGGCTTGCGAAGCGGGTAAATGCTCGTATTTTACAAGCTTCTACCAGTGAAGTATATGGCGACCCAAAGGTTCATCCGCAACAAGAAAGCTATTGGGGAAATGTTAACCCTGTCGGTATTCGATCCTGCTATGACGAAGGAAAGCGATGTGCAGAAACTCTTTTTATGGATTATCATCGCCAACATCATATTGCTATAAAAATCGTACGGATATTTAATACCTATGGCCCACGCATGCACCCTCAGGATGGACGTGTAGTTTCTAATTTTATTATGCAAGCTCTGCAAAATAAAGACATTACCATTTATGGTGAAGGAAATCAGACACGTAGTTTTCAATATGTAGATGATCTTGTCGAAGGAATGATACGGATGATGGATACCGAGAAGTCTTTTATTGGCCCAATAAATATCGGTAACCCCCATGAATTTACGATACTACAATTGGCTGAGCAGGTGATTCTACAGACTGGATCAAAATCAAAGATTAAGTTTTTGCCCTTGCCAAAAGACGATCCACAGCAACGAAAGCCAGATATCGAACTTGCGAAGAAAAGCTTAGACTGGAGTCCTACAGTTCAGCTGGAAGAGGGGTTGTCCAAGACAATAGCATATTTTAAAACATGCTTATAAAGATAATGAGGCCGCGGAAATCGAATTATCCAGCAATAACTTGGGCTTTGTGTTGATTGATATGATCAAGAAGTGTCTCATTCAAAATGGGTGAAGTTCTCAACATCTCACGGATCGGATATTTCTCGACAATATTTTTTAAAGCGTCCAGATGGCGTTGGTGGTGCAGGTCGGTTCCTACAAAATCGTACATGCCTGACTTTAAAAGAGTCATTGCTATCGCTTTTACATCTACACCATAGTATCGGCTCAAAGAAAGTAGGTTTAACTGGAGCAAACAACCAGCATCTTTAATTTGCTTATAAATATTAAAATTGCTATGATAATAATTATACCTTTCGGGATGGGCAAGAATGGGTTTATAGCCTAATTTTTGAATATCTCTAATTGTGTGAAATAAAGCTTTCGATTCCGAAAGGTAGGACATTTCGATTAACACATAGTCACCGGGCATTACACACAACTCATTTTCACGGATCAGTAAAGGAAGATTTTCGTCAATCATATGTTCGGCAGCCCCGAATATATCGACATCATTGCCAGATTTTTTTAGTCCATCGACAAGCGAATCTTTCGCATGTTCAATACTAAATTTGGTGTTTTGATGCACGCCAGCCATAATATGTGGTGTACAGATAAACTTTTTAAGTCCTAGGCGTTGAAGTTGCTGGATATAATGTAAGGATTGTTGTACCGAATCACTTCCATCATCAATACCTGGTAGCAGGTGATTGTGCATGTCCACTTGTAAAAATTCCAACTGCGCTAAAGAGTGGATTGATGAAGTCTTTTTCCCAAACAGGTTGCTAAAAAATCCCATGATGCAAATCTTATTATTGTTGTGCAAATAGTGCAGTGAAGGAGTGGCGTTTCAGTCTAATATTAAGCGAAGGTGTATATCTTAAATTCCTTTCCATGACTATGAGTGAATTGATACAAACAATATGCCAATAATTGTGTTAGTACCTAAAGTGTTGCATGGACTACCGGATTGTATCGAAGGATGACGGCAAAAATTGTTCTTTTATGAGCCTAAATTATTAATTGTAACGGGATTCATATTATTATTTTGTCAATGTAACAGTTTCGGTATAATAGTTGCTTAATCCACGTTGATAAATTGATCGAAGGGATAGGGTTCTTTTTTAATGATATTTTATCAAAGAGGTATTTTAGGTGTGAAAATTTGACTATCTTGCATCTCCTTTGTAAAATATTATAATAAAAAGCCATATCAGATCGTGTTCGTTTGTCGCATACATGGTCAGTAACATTTTAATTAAATAAGAGATAAGCTTATGATGGGTTCTCTAGGAGATTTAAGAAGACGCCTGAGAAAGGACAATCCACGATGGGTCATTTTAATGATCGATATGTGGTTTGTATTTGCAAGCTATGTGTTTTCTAATTATGTAGTTAACAACTTCAGGGGTGTATTTGATATTGAATTGATGCTGAAGAAAGTTGTCGTCATATTGCCGATATATTTCTTAATGTTTTTATGCTATGATACTTTTCGGGGTATTGTTCGGCAGACGGGCATTAGGGATACCATTAAAATCTTTAAGACGGTTGGTTCTGCCTATGTGATTTTAATGGTGCTAACCTTAATTATCAAAGCTGTTTTTGAAAAAGGTAGCGTGGCAGGAGATTATCTTCGCCTATCTTATGGTGTGTTGACCATGCAAGCCACAATTTTGCTGGTTATTATGGTGGGCGCACGTGTAATCTATCGGACGATTTACGAATATCTCTTCTTGCCTAGCCGGAAAGGTGAAAATGTGTTGATATTTGGAGCTTCGAGACCAGGCCTAGTATCATTCTCCTTATTGAAGGAAGATCCGAGAACGAAATATCAAGTGGTTGCTTTTGTGGAAGATAAAATATCACGGATAGGTAAGCGGTTGGCAGGAATAAAAATTAAAGATATTACCGAAATCACAAGGGAATATGTTGAAAAATGTCAGATTACTCAGGTCATCATCGCGGTTGAAAATAACGATCCGGAGCGTTTGGAATATGTCTCAGATTGGTTTCAAAATATTGGACTTGAACTGAAGATCATGCCTCCGGCACGAATTTTACTTAATTCAGGTGCGAAGCGTGAAATCAGGCCATTAAAGATTGAGGATTTATTGGGACGCAAGCCAATTAAATTAGATCATCCGGAAATTGAACAAGAGATGCAGGGTAAAGTCATCTTGGTGACCGGTGCCGCCGGATCTATCGGTTCGGAATTAGCCCGCCAGATCGCTAGACGTCATTATAAGACCTTAATTCTATTGGATCAAGCCGAGTCTGCGCTATATGATATCCAACAATCGATTAAGGCTACGCAACCCGAGCAGATGCACTGCGTGGTAGGTGATGTGCGTAACTATGCCTTTATGCAGAAGATATTTGCGCAATACAAACCCGATTTGGTCTTTCATGCGGCGGCCTATAAACACGTGCCTTTAATGGAAGCGAACCCCTACGAGTCCATTCAGACCAATGTATTGGGAAGTAAAAATGTGGCCGATCTGTGTATGCAATATCGGACTAAAAAAATGGTCATGGTGTCCACGGATAAGGCTGTCAATCCGACCAATGTTATGGGGGCGACTAAACGCATGGCTGAGATCTATGTAAGCAGCTGCAGCGGTAAATCCAATACGAGTTTTATCATTACCCGATTTGGAAATGTACTTGGTTCAAACGGTTCGGTTATTCCACTTTTTGAGAAGCAAATGGCAGAAGGAGGGCCGCTTACATTGACCCATCCTGAAATCACTCGTTTCTTTATGACGATACCTGAAGCGTGTCAATTGGTGCAAGAGGCAGGTGTGATGGGGAAAGGGGGTGAGATCTTTGTGTTCGATATGGGCAAGTCTGTCAAAATCATCGATCTTGCAAAACGCATGATCAAATTGAAAGGGTATCGTTACCCGGAAGATATCGATATAAAAATTGTTGGATTACGTCCAGGGGAGAAGATTTATGAGGAATTGTTAGCGAATAATGAGAATACGGTAAAGACACACCATCCAAAGATTATGATTGCTAACGTAAATCACGATAGTTTATCGCTTAAAGCAGAGCGTATTAATGCAATCTGCCAACGGATTTTGGATGCGGATAAGCAGTTGCCAGATTTTATGGAGCTTGTGGCCGGCATGAAACAGATTGTTCCAGAATTTAAATCTCAAAATTCAGAATATGAAATGCTGGATACAGTGACGGAGGAAAAAGAAATTGAATTGATTCATGAATCCACAGCGGAAGTACCAGTATATTCGTTGGTAAAGAACGTATTGTAAAGCTGTTATAAGACAGGTAAGTTTTAGATAATAACACGATAAAGAAGTGAAAAGCCCTCTGAATAGAAGGCTTTTTTTGTTTATTCCATTTACTCATGGATTAAAACTTGTCAATTAACAAAAATCATCCTAATTTTAGCGAACTATTTGGTGAACTCATCATTCGCAGACCAATGGTCTAAATATTCGAAAATCATTCTATGAATAAAACAATTTTAATTACTGGGGGAGCAGGCTTTATAGGATCACACGTTGTCCGTGAGTTTGTGTTGAAATATCCTGAATATCAAATTATAAATTTAGATGCTTTGACCTATGCTGGTAATCTGGAGAATTTAAAGGATATAGAGCATTTGCCCAATTACAGTTTTGTTAAGGCGGATATTACGGATCAGCATGCTGTCGCGGCTATTTTTCAGGAATATCAGCCCGACGGTATTATCCACTTGGCTGCGGAGTCGCATGTCGATCGTTCAATTGTCGATCCCATGGCTTTCGTTATGACTAACGTGATTGGTACGGTCAATTTATTGAATGCGGCGAAGACAATTTGGAAGGATAATTTTGAAGGAAAGCGATTTCATCATGTGTCAACAGATGAGGTGTTTGGTGCGCTCGGTGATACCGGATTTTTTACGGAAGAAACAAACTATGATCCCCATTCGCCGTATTCGGCATCTAAAGCAAGTTCAGATCATTTTGTGCGGGCTTACCATGATACCTACGGCCTGCCTATTGTGTTGACAAATTGTTCCAACAATTATGGCCCGAATCATTTCCCAGAGAAATTGATTCCTTTGTGCATTCATAATATTTTAAATCATAAATCACTCCCTGTTTATGGTGATGGAAAATATACCCGCGACTGGTTATATGTGATCGACCATGCAAAAGCCATTGATCTGGTTTTTCATGAAGGGAAAAATGGGGATTCCTATAACGTGGGCGGATTCAATGAATGGCAAAATATAGATCTGATCAAGGAGCTGTGCAAACAAATGGATGAGAAATTGGGGCGTGAAAAGGGCAATTCGGCACAGTTGATCACCTTTGTTAAAGACAGACCGGGGCATGATTTGCGCTACGCCATCGATGCCACAAAGATCAATAAGGAGTTGGGTTGGAAACCTTCGGTAACTTTTGAAGAGGGTTTGTCGCGAACCATAGACTGGTTTTTGGCTAATCAAGAATGGTTGGACCATGTAACATCTGGAGATTATCAAAAATATTATGACAATCAATACAAAGACGCATAAGGATGAGGTATACGGAAACTAAACTAAAAGGCTGTTTTATACTTGAACCGGCTGTGTTTGAAGATGAAAGGGGTTATTTTTTTGAATCATTTAATGAAACGAAATTAACGGCGATACTCGGTTATACACCACACTTTGTGCAGGATAATCAATCTAAATCACAGTTTGGCGTCGTCCGCGGACTACATTTGCAGGCTGGTGAACATGCACAAGCTAAATTGGTCCGTGTTGTTGAGGGAAAAGTGCTGGATGTTGCCGTCGATGTTCGTCCAGGATCCCCCACCTTTGGACAATATGTTGCGGTGGAACTTTCTGCCGAAAATAAACAACAAATGTATATTCCTCGAGGCTTCTTACATGGCTTTTCTGTATTGTCAACGCATGCTGTTTTTTTCTATAAATGTGATAATAACTATCATAAAGAATCAGAAGATGGTATAAATCCCTTAGATCTGGAATTGGCGATAGATTGGCAAATTCCCGCAGAACAAATGATTCTCTCACAAAAAGACCAAGAGGCGCAGTCTTTTGAAGAATTACGAATGAAATTAATTTAGGAGGATATGCGGATTGTTATAACAGGAGCTACAGGACAACTTGGGTCAGAATTAAGGGATCTCTTACAGAATAATACAGAAAAAGAGTGTTATTTCTTAGATCGGAAGCAATTGCCGTTGGATCAAATACAGATTATACAGGAGATCTTGGGAATGTATCAACCTGATCTCATTATACATGCAGGAGCATATACAGCCGTAGATAAAGCGGAGGAAGATCAGGTGACTCCGAATCTGGTCAATCATTTAGCCTCAGAAGAAATTGCACAGTATTGCCGTCTGCACGATACAAAACTTATTGCTATTTCGACAGATTATGTTTTTGATGGATCTTCTGCTTCTGCTTTAACAGAAACTGCAGAAACCGCCCCCATCAATGTATATGGTCAAACGAAACTAGCCGGAGAACAGGCGATTCAGAAATGGTGCCCCGACGCAATCATTATACGCACCTCTTGGGTATATTCCACCTACGGCAAAAATTTTGTTAAAACCATGTGTCGTTTAATGGATGAGCGTGATGAAGTGGGGGTAATTAACGATCAAATTGGAAGCCCTACTTATGCAGGAGATCTTGCTAGAGCGATATTAAAAATTATAGATTCGCCCGTCTGGGAGCCCGGTATTTATCATTATAGCAATGAAGGTGAAATTTCCTGGTACGACTTTGCTGTAGCGATACGTGATTTCCGATCGTTCGATTGTCAGGTAAAACCGATTCCCACAAGTGCGTACCCCACACCTGCTCGCAGGCCAAAGTATTCGCTACTTGATAAATCAAAAATTAAGAGAATATTTGGCGTGGAAGTGCCGGATTGGAAAATAAGTTTGGGTAATATGCTCGCTGAAGAATTTAAATAATTAGAAAAAATAAGGAGACTTTGTCAATATCGTTGTAAAGTCTTTTTCGTTAAATAACAGTAAAATGAAAGGAATTATATTAGCTGGGGGCTCAGGGACTCGATTACACCCACTTACATTGGCCGTAAGCAAGCAATTGATGCCTGTATATGATAAACCTATGATATACTACCCCTTGTCGACATTGATGCTGGCTGGTATACGGGAGATTTTGATTATATCGACACCGCAAGATTTGCCAAATTTTGAAAAGTTATTGGGGGGCGGTTCGCAATTAGGCTGTCGCTTCGAATATAAAGAGCAGCCAAGTCCAGATGGACTGGCGCAAGCATTTTTGCTTGGAGAAGAATTTATCGGTGACGATAAAGTAGCCTTGATTTTAGGCGATAATATCTTTTATGGCTCGGGGCTTTCAAAACTATTGCAGTCATCGGCAGATCCTGATGGCGGGGTAGTTTTTGCCTATCCAGTGCAGGACCCGGAACGATATGGTGTGGTTGAATTTGATGAAGGAAATAACGTTATTTCTATTGAAGAAAAACCACAATTTCCAAAGTCGAATTATGCTGTTCCTGGTGTTTATTTTTATGACAACGAGGTGGTTAAGATTGCTAAAAATATAAAACCTTCTCCTCGCGGTGAGCTCGAGATCACCGATATCAATAAAGAGTATCTTCGCCGGGGCAAATTAAAGGTTGGTATTTTTGATCGTGGCACAGCATGGTTGGATACCGGGACTATACAGTCGCTCATGCAGGCAGGTCAATTTGTGCAAGTAATCGAGGAGCGACAAGGAATGAAAATAGGGGCAATTGAAGAAGTTGCTTACAGAATGGGCTACATTGATGGACAGCAGTTGCTAAAACTTTCTCTACCGCTCTGCAAGTCGGGATATGGAGAGTATTTAAAGCGTATTGTAAAAAGCTTTTAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP019158|622441:631446|629660_630515_+|WP_075990685.1|DBSCAN-SWA
MRIVITGATGQLGSELRDLLQNNTEKECYFLDRKQLPLDQIQIIQEILGMYQPDLIIHAGAYTAVDKAEEDQVTPNLVNHLASEEIAQYCRLHDTKLIAISTDYVFDGSSASALTETAETAPINVYGQTKLAGEQAIQKWCPDAIIIRTSWVYSTYGKNFVKTMCRLMDERDEVGVINDQIGSPTYAGDLARAILKIIDSPVWEPGIYHYSNEGEISWYDFAVAIRDFRSFDCQVKPIPTSAYPTPARRPKYSLLDKSKIKRIFGVEVPDWKISLGNMLAEEFK
>NZ_CP019158|622441:631446|625843_627841_+|WP_075990682.1|DBSCAN-SWA
MGSLGDLRRRLRKDNPRWVILMIDMWFVFASYVFSNYVVNNFRGVFDIELMLKKVVVILPIYFLMFLCYDTFRGIVRQTGIRDTIKIFKTVGSAYVILMVLTLIIKAVFEKGSVAGDYLRLSYGVLTMQATILLVIMVGARVIYRTIYEYLFLPSRKGENVLIFGASRPGLVSFSLLKEDPRTKYQVVAFVEDKISRIGKRLAGIKIKDITEITREYVEKCQITQVIIAVENNDPERLEYVSDWFQNIGLELKIMPPARILLNSGAKREIRPLKIEDLLGRKPIKLDHPEIEQEMQGKVILVTGAAGSIGSELARQIARRHYKTLILLDQAESALYDIQQSIKATQPEQMHCVVGDVRNYAFMQKIFAQYKPDLVFHAAAYKHVPLMEANPYESIQTNVLGSKNVADLCMQYRTKKMVMVSTDKAVNPTNVMGATKRMAEIYVSSCSGKSNTSFIITRFGNVLGSNGSVIPLFEKQMAEGGPLTLTHPEITRFFMTIPEACQLVQEAGVMGKGGEIFVFDMGKSVKIIDLAKRMIKLKGYRYPEDIDIKIVGLRPGEKIYEELLANNENTVKTHHPKIMIANVNHDSLSLKAERINAICQRILDADKQLPDFMELVAGMKQIVPEFKSQNSEYEMLDTVTEEKEIELIHESTAEVPVYSLVKNVL
>NZ_CP019158|622441:631446|630579_631446_+|WP_075990686.1|DBSCAN-SWA
MKGIILAGGSGTRLHPLTLAVSKQLMPVYDKPMIYYPLSTLMLAGIREILIISTPQDLPNFEKLLGGGSQLGCRFEYKEQPSPDGLAQAFLLGEEFIGDDKVALILGDNIFYGSGLSKLLQSSADPDGGVVFAYPVQDPERYGVVEFDEGNNVISIEEKPQFPKSNYAVPGVYFYDNEVVKIAKNIKPSPRGELEITDINKEYLRRGKLKVGIFDRGTAWLDTGTIQSLMQAGQFVQVIEERQGMKIGAIEEVAYRMGYIDGQQLLKLSLPLCKSGYGEYLKRIVKSF
>NZ_CP019158|622441:631446|622441_623572_+|WP_075990679.1|DBSCAN-SWA
MEIDFSTYNILIVEDSELNLFVLKEILEREHFNVFSASSAKGAFENLRLQRIDLILMDVMMGETNGFDLTKELKSMELYKHIPVLFITNLKSPDDVVRGFDSGGVDYIPKPFNKKELLQRIKHQIRLIESGHTIAMQTAQLQEAILNRDRMYAILAHDLRSPISSLKMILNILTMSPEGSNTGYGDMINTGNDIAEQLFSVLDNLLKWTKNSLGVLSYMPQEIEFDEMIKGVVETLQPTAKLKNTEIQLKLQPGLQIFFDADIMKSILRNLLINAVKFSHEDSLIKLNLYRNEDDAVVEFIDTGVGMSLDAQRQLKDQIMEEGKITPMREKGKGLGLWVVYHFIQRNGGTFFFESEEHVGSRFGFRVPLLQITSNQ
>NZ_CP019158|622441:631446|624567_625362_-|WP_075990681.1|DBSCAN-SWA
MGFFSNLFGKKTSSIHSLAQLEFLQVDMHNHLLPGIDDGSDSVQQSLHYIQQLQRLGLKKFICTPHIMAGVHQNTKFSIEHAKDSLVDGLKKSGNDVDIFGAAEHMIDENLPLLIRENELCVMPGDYVLIEMSYLSESKALFHTIRDIQKLGYKPILAHPERYNYYHSNFNIYKQIKDAGCLLQLNLLSLSRYYGVDVKAIAMTLLKSGMYDFVGTDLHHQRHLDALKNIVEKYPIREMLRTSPILNETLLDHINQHKAQVIAG
>NZ_CP019158|622441:631446|628041_629097_+|WP_075990683.1|DBSCAN-SWA
MNKTILITGGAGFIGSHVVREFVLKYPEYQIINLDALTYAGNLENLKDIEHLPNYSFVKADITDQHAVAAIFQEYQPDGIIHLAAESHVDRSIVDPMAFVMTNVIGTVNLLNAAKTIWKDNFEGKRFHHVSTDEVFGALGDTGFFTEETNYDPHSPYSASKASSDHFVRAYHDTYGLPIVLTNCSNNYGPNHFPEKLIPLCIHNILNHKSLPVYGDGKYTRDWLYVIDHAKAIDLVFHEGKNGDSYNVGGFNEWQNIDLIKELCKQMDEKLGREKGNSAQLITFVKDRPGHDLRYAIDATKINKELGWKPSVTFEEGLSRTIDWFLANQEWLDHVTSGDYQKYYDNQYKDA
>NZ_CP019158|622441:631446|629099_629654_+|WP_075990684.1|DBSCAN-SWA
MRYTETKLKGCFILEPAVFEDERGYFFESFNETKLTAILGYTPHFVQDNQSKSQFGVVRGLHLQAGEHAQAKLVRVVEGKVLDVAVDVRPGSPTFGQYVAVELSAENKQQMYIPRGFLHGFSVLSTHAVFFYKCDNNYHKESEDGINPLDLELAIDWQIPAEQMILSQKDQEAQSFEELRMKLI
>NZ_CP019158|622441:631446|623597_624542_+|WP_075990680.1|DBSCAN-SWA
MYNLKKRILVSGGAGFIGSHLCERLLKDGHEVICMDNFFTGDKSNIVHLLQNPYFELVRHDVTEPFLAEVDEIYNLACPASPVHYQYNPIKTIKTSVMGAINMLGLAKRVNARILQASTSEVYGDPKVHPQQESYWGNVNPVGIRSCYDEGKRCAETLFMDYHRQHHIAIKIVRIFNTYGPRMHPQDGRVVSNFIMQALQNKDITIYGEGNQTRSFQYVDDLVEGMIRMMDTEKSFIGPINIGNPHEFTILQLAEQVILQTGSKSKIKFLPLPKDDPQQRKPDIELAKKSLDWSPTVQLEEGLSKTIAYFKTCL

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075990679.1|622441_623572_+	hybrid sensor histidine kinase/response regulator	W8CYM9	Bacillus_phage	1.0e-11	33.1
WP_075990680.1|623597_624542_+	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	1.2e-85	50.6
WP_075990681.1|624567_625362_-	protein tyrosine phosphatase	NA	NA	NA	NA
WP_075990682.1|625843_627841_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	3.7e-28	30.7
WP_075990683.1|628041_629097_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.4e-90	51.5
WP_075990684.1|629099_629654_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	8.6e-36	48.3
WP_075990685.1|629660_630515_+	dTDP-4-dehydrorhamnose reductase	A0A222YY99	Synechococcus_phage	5.4e-05	26.5
WP_075990686.1|630579_631446_+	glucose-1-phosphate thymidylyltransferase RfbA	H9NC64	Sphingomonas_phage	3.8e-99	63.6