CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP015397	Klebsiella pneumoniae strain CR14 plasmid pCR14_5, complete sequence	0 crisprs	NA	0
NZ_CP015396	Klebsiella pneumoniae strain CR14 plasmid pCR14_4, complete sequence	0 crisprs	NA	1
NZ_CP015392	Klebsiella pneumoniae strain CR14 chromosome, complete genome	1 crisprs	csa3,cas3,RT,DEDDh,DinG,WYL	10
NZ_CP015394	Klebsiella pneumoniae strain CR14 plasmid pCR14_2, complete sequence	0 crisprs	DEDDh	1
NZ_CP015393	Klebsiella pneumoniae strain CR14 plasmid pCR14_1, complete sequence	0 crisprs	csa3,cas3,RT	3
NZ_CP015395	Klebsiella pneumoniae strain CR14 plasmid pCR14_3, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

105708 : 128892

Salmonella_phage(30.0%)

transposase,integrase

attL 100093:100107|attR 125842:125856

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
100093:100107	attL	NA	NA	NA	NA
WP_000427623.1\|105708_106713_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_001138073.1\|106791_109764_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_001162012.1\|109766_110324_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_000845054.1\|110629_111643_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
WP_032488579.1\|111792_112347_+	aminoglycoside N-acetyltransferase AAC(6')-Ib3	NA	NA	NA	NA
WP_001007673.1\|112428_113256_+	oxacillin-hydrolyzing class D beta-lactamase OXA-2	NA	NA	NA	NA
WP_000470556.1\|113316_113607_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_000679427.1\|113711_114059_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|114052_114892_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|115296_116838_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_025368620.1\|117336_118212_+	class A extended-spectrum beta-lactamase CTX-M-2	A0A1B0VBP7	Salmonella_phage	1.0e-123	81.5
WP_000679427.1\|119295_119643_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|119636_120476_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376623.1\|120603_121104_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012291341.1\|121621_124630_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	64.5
WP_001235713.1\|124793_125351_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000027057.1\|125533_126394_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
125842:125856	attR	NA	NA	NA	NA
WP_000557452.1\|126535_127396_+	aminoglycoside N-acetyltransferase AAC(3)-IIe	NA	NA	NA	NA
WP_000587836.1\|127408_127702_+	hypothetical protein	NA	NA	NA	NA
WP_162832797.1\|127754_128892_+\|transposase	IS3-like element ISKpn11 family transposase	A0A2P1JR32	Mycobacterium_phage	1.5e-18	32.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP015393

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

21194 : 52869

Escherichia_phage(25.0%)

integrase,transposase,protease

attL 17707:17722|attR 60124:60139

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
17707:17722	attL	NA	NA	NA	NA
WP_020314316.1\|21194_22541_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004152113.1\|24383_25346_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_009483782.1\|25332_26082_-	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_004152115.1\|26319_26517_-	hypothetical protein	NA	NA	NA	NA
WP_004152116.1\|26516_29312_-	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
WP_004152117.1\|29426_29996_-	small heat shock protein sHSP20	NA	NA	NA	NA
WP_004152118.1\|30030_30312_-	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
WP_004118208.1\|30555_30819_-	hypothetical protein	NA	NA	NA	NA
WP_004118209.1\|30833_31097_+\|transposase	transposase	NA	NA	NA	NA
WP_000019473.1\|32298_33279_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004152692.1\|34487_35357_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152693.1\|35350_36361_-	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.4e-15	25.1
WP_004152694.1\|36369_37197_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_004152695.1\|37205_38069_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004153729.1\|38065_38893_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
WP_004217321.1\|39748_40453_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000427623.1\|41787_42792_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_071527925.1\|43089_43332_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004118251.1\|43662_43956_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
WP_004152282.1\|44054_44822_-	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_004152281.1\|44822_45779_-	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004118243.1\|45775_46774_-	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_004118241.1\|46770_47673_-	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_004152280.1\|47717_50042_-	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_004118237.1\|50127_51081_-	fec operon regulator FecR	NA	NA	NA	NA
WP_004118235.1\|51077_51599_-	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_161989521.1\|52560_52773_-	hypothetical protein	NA	NA	NA	NA
WP_004118231.1\|52701_52869_+\|integrase	integrase	NA	NA	NA	NA
60124:60139	attR	NA	NA	NA	NA

DBSCAN-SWA_2

65152 : 97884

Escherichia_phage(44.44%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020956879.1\|65152_65539_-\|transposase	transposase	B6DZU5	Stx2-converting_phage	1.1e-58	90.7
WP_004118217.1\|66086_66722_-	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA
WP_000005560.1\|66718_67831_-	His-Xaa-Ser system radical SAM maturase HxsC	S5WIP3	Leptospira_phage	1.5e-47	33.8
WP_004118216.1\|67823_69212_-	His-Xaa-Ser system radical SAM maturase HxsB	S5VT21	Leptospira_phage	6.3e-51	29.0
WP_000333416.1\|69211_69484_-	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA
WP_000412211.1\|71100_71760_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_000656305.1\|71960_72338_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000427623.1\|72648_73653_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_000184001.1\|73880_75086_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|75096_75402_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|75628_76393_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001137892.1\|76885_77470_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000004159.1\|77469_78708_-	MFS transporter	NA	NA	NA	NA
WP_000219391.1\|78704_79610_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_044503635.1\|79731_80400_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	3.3e-130	99.1
WP_000427623.1\|80691_81696_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_004152284.1\|82099_83110_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_004152286.1\|83570_84653_+	DNA-binding transcriptional repressor LacI	C6ZCU4	Enterobacteria_phage	6.8e-186	96.4
WP_004152287.1\|84774_87849_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.7
WP_003846917.1\|87900_89154_+	lactose permease	NA	NA	NA	NA
WP_004152290.1\|90859_93169_+	TerB N-terminal domain-containing protein	NA	NA	NA	NA
WP_004152291.1\|93172_94489_+	ATP-binding protein	NA	NA	NA	NA
WP_000093087.1\|94485_96681_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_000019473.1\|96903_97884_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1

DBSCAN-SWA_3

136079 : 184714

Macacine_betaherpesvirus(15.0%)

integrase,transposase,holin

attL 154335:154351|attR 185396:185412

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001339197.1\|136079_137288_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_004178059.1\|137692_137998_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA
WP_004178060.1\|138011_138380_-	type IV conjugative transfer system pilin TraA	NA	NA	NA	NA
WP_004208838.1\|138433_138805_-	TraY domain-containing protein	NA	NA	NA	NA
WP_011977735.1\|138888_139575_-	conjugal transfer protein TraJ	NA	NA	NA	NA
WP_004178062.1\|139797_140190_-	relaxosome protein TraM	NA	NA	NA	NA
WP_004178063.1\|140623_141109_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_011977736.1\|141141_141471_-	hypothetical protein	NA	NA	NA	NA
WP_004178064.1\|141503_142325_-	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	2.6e-44	40.4
WP_004152722.1\|143158_143572_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004152721.1\|143572_143851_-	helix-turn-helix transcriptional regulator	O64356	Escherichia_phage	2.5e-07	39.4
WP_004152720.1\|143840_144161_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	6.8e-09	39.5
WP_004152719.1\|144241_144466_-	hypothetical protein	NA	NA	NA	NA
WP_004152718.1\|144476_144689_-	hypothetical protein	NA	NA	NA	NA
WP_004152717.1\|144749_145106_-	hypothetical protein	A0A248SL90	Klebsiella_phage	2.6e-25	58.1
WP_004152758.1\|145741_146092_-	hypothetical protein	NA	NA	NA	NA
WP_004152759.1\|146088_146361_-	hypothetical protein	NA	NA	NA	NA
WP_004118124.1\|147060_147222_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_004220208.1\|147293_148373_+\|transposase	IS481-like element ISKpn28 family transposase	NA	NA	NA	NA
WP_004152638.1\|148550_148925_-	hypothetical protein	NA	NA	NA	NA
WP_004152639.1\|148980_149307_-	hypothetical protein	NA	NA	NA	NA
WP_004152640.1\|149303_150032_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_004152641.1\|150028_150460_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_004178066.1\|150526_152563_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	9.0e-22	26.0
WP_004152643.1\|152632_152881_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_004152644.1\|152929_153472_-	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	6.0e-50	76.7
WP_004152645.1\|154247_154811_-	methyltransferase	A8HNV9	Thalassomonas_phage	1.3e-18	34.1
154335:154351	attL	NA	NA	NA	NA
WP_004178068.1\|154858_156214_-	DUF3560 domain-containing protein	NA	NA	NA	NA
WP_004198570.1\|156265_156496_-	hypothetical protein	NA	NA	NA	NA
WP_004178072.1\|156587_156815_-	hypothetical protein	NA	NA	NA	NA
WP_004118473.1\|157596_157914_-	hypothetical protein	NA	NA	NA	NA
WP_004152754.1\|157948_158203_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.2e-11	50.0
WP_004118478.1\|158439_158865_-	antirestriction protein	NA	NA	NA	NA
WP_004152753.1\|159385_159616_-	hypothetical protein	NA	NA	NA	NA
WP_004178082.1\|159849_161337_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004178083.1\|161739_162165_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.3e-31	49.6
WP_004152715.1\|162164_163436_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.6e-155	63.7
WP_004152062.1\|166387_167359_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	4.1e-150	86.6
WP_000523813.1\|167358_168525_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	1.4e-224	97.7
WP_004152063.1\|169276_170287_+	replication initiation protein	J9Q7H0	Salmonella_phage	8.8e-87	55.9
WP_001515717.1\|171003_171744_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	58.6
WP_004152065.1\|172887_173835_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.8e-12	30.6
WP_071527918.1\|173861_174173_-	EAL domain-containing protein	NA	NA	NA	NA
WP_011977741.1\|174192_175161_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.5e-184	98.1
WP_004197688.1\|175833_176091_-	hypothetical protein	NA	NA	NA	NA
WP_020444838.1\|176692_178147_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004152070.1\|179129_180407_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_004178088.1\|180469_182467_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
WP_085955172.1\|183506_184714_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
185396:185412	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP015392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015392_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015392_1

4578471-4578565

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015392_1

>merge|NZ_CP015392|1|4578471-4578565|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP015392|1|1|4578471-4578565|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015392.1\|WP_002888368.1\|4565869_4567579_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP015392.1\|WP_002888320.1\|4589114_4589594_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP015392.1\|WP_002888324.1\|4586804_4587626_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP015392.1\|WP_002888332.1\|4581052_4581880_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP015392.1\|WP_002888340.1\|4578706_4580332_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP015392.1\|WP_004151368.1\|4572645_4575552_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP015392.1\|WP_002888345.1\|4577017_4578382_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP015392.1\|WP_002888321.1\|4588010_4588859_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP015392.1\|WP_002888347.1\|4576298_4576838_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP015392.1\|WP_004147026.1\|4582123_4584472_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP015392.1\|WP_002888353.1\|4569229_4569925_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP015392.1\|WP_002888373.1\|4563790_4564558_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP015392.1\|WP_002888327.1\|4585818_4586808_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP015392.1\|WP_002888337.1\|4580321_4581020_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP015392.1\|WP_077274547.1\|4587628_4588006_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP015392.1\|WP_002888329.1\|4584526_4585813_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP015392.1\|WP_002888349.1\|4570100_4572458_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP015392.1\|WP_002888348.1\|4575564_4576224_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP015392.1\|WP_002888357.1\|4567589_4569092_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP015392.1\|WP_002888370.1\|4564686_4565532_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717

Protein	Function_ID	Function_description	E-value
NZ_CP015392.1\|WP_002888368.1\|4565869_4567579_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP015392.1\|WP_002888320.1\|4589114_4589594_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP015392.1\|WP_002888324.1\|4586804_4587626_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP015392.1\|WP_002888332.1\|4581052_4581880_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP015392.1\|WP_002888340.1\|4578706_4580332_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP015392.1\|WP_004151368.1\|4572645_4575552_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP015392.1\|WP_002888345.1\|4577017_4578382_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP015392.1\|WP_002888321.1\|4588010_4588859_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP015392.1\|WP_002888347.1\|4576298_4576838_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP015392.1\|WP_004147026.1\|4582123_4584472_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP015392.1\|WP_002888353.1\|4569229_4569925_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP015392.1\|WP_002888373.1\|4563790_4564558_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP015392.1\|WP_002888327.1\|4585818_4586808_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP015392.1\|WP_002888337.1\|4580321_4581020_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP015392.1\|WP_077274547.1\|4587628_4588006_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	4.08871e-72
NZ_CP015392.1\|WP_002888329.1\|4584526_4585813_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP015392.1\|WP_002888349.1\|4570100_4572458_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP015392.1\|WP_002888348.1\|4575564_4576224_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP015392.1\|WP_002888357.1\|4567589_4569092_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP015392.1\|WP_002888370.1\|4564686_4565532_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0

>NZ_CP015392.1|WP_002888345.1|4577017_4578382_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP015392.1|WP_002888347.1|4576298_4576838_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP015392.1|WP_002888348.1|4575564_4576224_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP015392.1|WP_004151368.1|4572645_4575552_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP015392.1|WP_002888349.1|4570100_4572458_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP015392.1|WP_002888353.1|4569229_4569925_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP015392.1|WP_002888357.1|4567589_4569092_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP015392.1|WP_002888368.1|4565869_4567579_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP015392.1|WP_002888370.1|4564686_4565532_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP015392.1|WP_002888373.1|4563790_4564558_-|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>NZ_CP015392.1|WP_002888340.1|4578706_4580332_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP015392.1|WP_002888337.1|4580321_4581020_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP015392.1|WP_002888332.1|4581052_4581880_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP015392.1|WP_004147026.1|4582123_4584472_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP015392.1|WP_002888329.1|4584526_4585813_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP015392.1|WP_002888327.1|4585818_4586808_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP015392.1|WP_002888324.1|4586804_4587626_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP015392.1|WP_077274547.1|4587628_4588006_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVYVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP015392.1|WP_002888321.1|4588010_4588859_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP015392.1|WP_002888320.1|4589114_4589594_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

451496 : 484753

uncultured_Caudovirales_phage(75.0%)

terminase,head,capsid,protease,integrase,portal,tail,tRNA

attL 469103:469120|attR 485098:485115

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002919147.1\|451496_452444_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
WP_002919144.1\|452458_452968_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
WP_002919139.1\|453096_454221_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_002919137.1\|454192_454666_+	DUF494 domain-containing protein	NA	NA	NA	NA
WP_004145330.1\|454691_455234_+	topoisomerase DNA-binding C4 zinc finger domain-containing protein	NA	NA	NA	NA
WP_002919132.1\|455238_455811_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
WP_002919126.1\|455814_456633_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_002919125.1\|456629_456887_+	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_002919123.1\|456862_457417_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_002919103.1\|463211_463433_-	membrane protein	NA	NA	NA	NA
WP_002919102.1\|463726_466837_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_002919101.1\|466849_467989_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004150972.1\|468367_469018_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
469103:469120	attL	NA	NA	NA	NA
WP_004150971.1\|469293_470520_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
WP_004150970.1\|470612_471554_+	hypothetical protein	NA	NA	NA	NA
WP_001547839.1\|471735_472020_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_004150969.1\|472030_472810_+	phage antirepressor KilAC domain-containing protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
WP_106918304.1\|473261_473531_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_001549752.1\|473523_473712_+	hypothetical protein	NA	NA	NA	NA
WP_004150967.1\|473704_474019_+	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|474015_474384_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_001549749.1\|474380_474746_+	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|474745_476881_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_004150964.1\|477223_477559_+	hypothetical protein	NA	NA	NA	NA
WP_004150963.1\|477607_478120_-	hypothetical protein	NA	NA	NA	NA
WP_001549743.1\|478383_479550_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_001547826.1\|479601_480162_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_004150962.1\|480163_481405_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_004150961.1\|481401_481737_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_001547824.1\|481733_482033_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150959.1\|482032_482476_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_004150957.1\|482468_482621_+	hypothetical protein	A0A2H4JCY9	uncultured_Caudovirales_phage	2.4e-17	88.0
WP_000113647.1\|482751_483108_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150955.1\|483091_484753_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
485098:485115	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1219073 : 1290233

Salmonella_phage(80.0%)

terminase,transposase,head,capsid,lysis,plate,integrase,portal,tail,tRNA

attL 1242292:1242338|attR 1278859:1278905

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001339197.1\|1219073_1220282_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_146642486.1\|1220351_1220549_-	hypothetical protein	NA	NA	NA	NA
WP_002914261.1\|1220578_1221247_-	molecular chaperone	NA	NA	NA	NA
WP_002914260.1\|1221288_1221837_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_004218900.1\|1221940_1222558_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002914253.1\|1222910_1223759_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004152937.1\|1223814_1224435_-	hypothetical protein	NA	NA	NA	NA
WP_002914250.1\|1224590_1225385_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_004151028.1\|1225445_1226378_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
WP_004151027.1\|1226383_1227112_-	class II aldolase/adducin family protein	NA	NA	NA	NA
WP_004151026.1\|1227112_1228633_-	amino acid ABC transporter permease/ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-33	40.8
WP_004151025.1\|1228663_1229467_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002914201.1\|1229486_1230554_-	isopenicillin N synthase family oxygenase	NA	NA	NA	NA
WP_002914200.1\|1230550_1231414_-	TIM barrel protein	NA	NA	NA	NA
WP_004151024.1\|1231424_1232375_-	agmatinase	NA	NA	NA	NA
WP_002914199.1\|1232490_1233402_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002914191.1\|1233815_1234295_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_000347934.1\|1234364_1237517_-	multidrug efflux RND transporter permease subunit OqxB	NA	NA	NA	NA
WP_002914189.1\|1237540_1238716_-	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NA	NA	NA	NA
WP_002914181.1\|1239050_1239413_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002914180.1\|1239423_1239996_-	flavin reductase	NA	NA	NA	NA
WP_002914178.1\|1240207_1241092_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004151022.1\|1241216_1242017_+	hypothetical protein	NA	NA	NA	NA
1242292:1242338	attL	NA	NA	NA	NA
WP_004151021.1\|1242451_1244002_-	hypothetical protein	NA	NA	NA	NA
WP_004151020.1\|1243998_1245024_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.5e-190	93.8
WP_004151019.1\|1245026_1245656_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_001397669.1\|1245778_1246021_+	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151018.1\|1246053_1246563_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_004151017.1\|1246570_1246771_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004144796.1\|1246734_1247073_+	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151016.1\|1247140_1247374_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004151014.1\|1247373_1247601_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151013.1\|1247597_1248449_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_077274515.1\|1248445_1250830_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.8
WP_004151011.1\|1250992_1251181_+	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_004151010.1\|1251192_1251426_+	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151009.1\|1251521_1252205_-	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|1252191_1253271_-	hypothetical protein	NA	NA	NA	NA
WP_004151007.1\|1253270_1254272_-	hypothetical protein	NA	NA	NA	NA
WP_024940854.1\|1254793_1255063_+	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151006.1\|1255119_1256163_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_019405037.1\|1256162_1257926_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
WP_004151004.1\|1258066_1258900_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_004151003.1\|1258916_1259969_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004134644.1\|1259972_1260626_+\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
WP_004151002.1\|1260721_1261186_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_004151001.1\|1261185_1261389_+\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004134639.1\|1261392_1261608_+	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151000.1\|1261588_1262098_+	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004150999.1\|1262102_1262486_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004150998.1\|1262482_1262911_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_072093160.1\|1262885_1263044_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	9.0e-15	75.0
WP_004150997.1\|1263006_1263429_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_004150996.1\|1263421_1263868_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150995.1\|1263890_1264757_-	hypothetical protein	NA	NA	NA	NA
WP_004150994.1\|1264851_1265424_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150993.1\|1265420_1265783_+	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150992.1\|1265769_1266678_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004152935.1\|1266670_1267342_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150990.1\|1267343_1269293_+	CotH kinase family protein	Q6QI97	Burkholderia_phage	1.0e-06	38.9
WP_004200602.1\|1269302_1270421_+	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150988.1\|1270472_1271546_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004150987.1\|1271694_1272867_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150986.1\|1272876_1273392_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150985.1\|1273444_1273744_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_002896220.1\|1273758_1273878_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_072093161.1\|1274104_1276501_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.1e-107	44.5
WP_004150983.1\|1276497_1276983_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_004150982.1\|1276979_1278074_+	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150981.1\|1278140_1278359_+	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150980.1\|1278386_1278764_-	hypothetical protein	NA	NA	NA	NA
WP_002914164.1\|1279367_1279850_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1278859:1278905	attR	NA	NA	NA	NA
WP_004188817.1\|1279960_1280437_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914161.1\|1280426_1280717_+	RnfH family protein	NA	NA	NA	NA
WP_002914160.1\|1280783_1281125_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914159.1\|1281272_1282934_-	DNA repair protein RecN	NA	NA	NA	NA
WP_002914158.1\|1283020_1283899_-	NAD(+) kinase	NA	NA	NA	NA
WP_002914155.1\|1284023_1284614_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_004149392.1\|1284733_1286020_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914153.1\|1286039_1286831_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_002914152.1\|1286994_1288359_+	signal recognition particle protein	NA	NA	NA	NA
WP_002914149.1\|1288618_1288867_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_004150977.1\|1288885_1289434_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914147.1\|1289465_1290233_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_3

1399894 : 1460148

Salmonella_phage(41.51%)

terminase,transposase,holin,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152546.1\|1399894_1400488_-	adenine methylase	T1SA14	Salmonella_phage	4.3e-110	92.4
WP_004152545.1\|1400484_1400643_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.9e-17	78.8
WP_077274516.1\|1400646_1400928_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.7e-30	73.9
WP_004152543.1\|1401037_1401286_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.1e-27	69.5
WP_004152542.1\|1401337_1402360_-	recombination protein RecT	Q858E1	Salmonella_phage	2.4e-180	95.3
WP_004152541.1\|1402369_1403269_-	YqaJ viral recombinase family protein	Q858E0	Salmonella_phage	1.5e-159	93.0
WP_004164029.1\|1403265_1403565_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004164037.1\|1403561_1403711_-	hypothetical protein	G9L6A5	Escherichia_phage	7.9e-13	84.2
WP_004152539.1\|1403931_1404513_-	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	1.9e-65	64.8
WP_004152538.1\|1404666_1404900_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152537.1\|1405046_1405256_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004207253.1\|1405255_1406023_+	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_004152535.1\|1406019_1406805_+	replication protein	A0A193GYX1	Enterobacter_phage	8.2e-133	87.4
WP_004152534.1\|1406924_1407272_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	5.0e-50	82.6
WP_004152532.1\|1407463_1407874_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	3.1e-14	42.2
WP_004152531.1\|1407857_1408049_+	hypothetical protein	NA	NA	NA	NA
WP_004152530.1\|1408045_1408471_+	hypothetical protein	NA	NA	NA	NA
WP_004152529.1\|1408467_1409211_+	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-19	59.5
WP_004152528.1\|1409210_1409381_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.5e-15	69.6
WP_004141386.1\|1409381_1409594_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_004152527.1\|1409590_1410259_+	DUF551 domain-containing protein	Q6UAT8	Klebsiella_phage	1.5e-05	52.5
WP_004152526.1\|1410251_1410491_+	hypothetical protein	G8C7S3	Escherichia_phage	4.6e-10	48.0
WP_004152525.1\|1410490_1410829_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	4.7e-45	80.0
WP_004178082.1\|1410925_1412413_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004152524.1\|1412813_1413071_+	hypothetical protein	NA	NA	NA	NA
WP_004152523.1\|1413148_1413733_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.4e-89	88.1
WP_020314691.1\|1413729_1415205_+	hypothetical protein	Q858H3	Salmonella_phage	3.2e-279	92.7
WP_004152473.1\|1415248_1415770_-	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	7.8e-47	55.2
WP_004152472.1\|1416475_1416679_+	hypothetical protein	NA	NA	NA	NA
WP_004152471.1\|1416682_1418362_+\|tail	tail protein	T1S9Z7	Salmonella_phage	3.4e-192	58.9
WP_004152470.1\|1418358_1418664_+	hypothetical protein	Q2A090	Sodalis_phage	1.1e-16	51.3
WP_004152468.1\|1418945_1419344_+	peptidase	T1SAP9	Salmonella_phage	5.6e-37	59.5
WP_004152467.1\|1419356_1420364_+\|capsid	phage capsid protein	T1S9H9	Salmonella_phage	2.7e-181	92.5
WP_004152466.1\|1420373_1420766_+	hypothetical protein	T1SA71	Salmonella_phage	1.5e-55	89.9
WP_004152465.1\|1420758_1421037_+	hypothetical protein	T1SA01	Salmonella_phage	6.7e-21	58.9
WP_004153043.1\|1421085_1421697_+	hypothetical protein	T1SAQ2	Salmonella_phage	1.2e-46	48.8
WP_004152463.1\|1421696_1424174_+	hypothetical protein	G9L6D0	Escherichia_phage	3.6e-267	56.5
WP_004152462.1\|1424175_1424646_+	hypothetical protein	Q858G2	Salmonella_phage	7.3e-44	55.3
WP_004152461.1\|1424638_1425136_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	5.7e-23	40.5
WP_004243852.1\|1425148_1427893_+	hypothetical protein	A0A193GYI3	Enterobacter_phage	1.2e-93	39.2
WP_004152459.1\|1427892_1431282_+	hypothetical protein	G9L6D4	Escherichia_phage	6.3e-121	42.0
WP_004152458.1\|1431291_1431906_+	hypothetical protein	NA	NA	NA	NA
WP_004152457.1\|1432180_1432579_-	hypothetical protein	NA	NA	NA	NA
WP_077274517.1\|1432583_1432766_-	hypothetical protein	NA	NA	NA	NA
WP_004152455.1\|1432956_1433652_-	hypothetical protein	A0A193GYJ9	Enterobacter_phage	4.4e-61	52.7
WP_157833602.1\|1433735_1433924_-	ash family protein	NA	NA	NA	NA
WP_004152454.1\|1434032_1434230_-	type II toxin-antitoxin system HicA family toxin	A0A0M4RCZ9	Salmonella_phage	2.0e-19	69.8
WP_004152453.1\|1434233_1434491_-	DUF1902 domain-containing protein	A0A0M4R2Z9	Salmonella_phage	2.3e-12	54.1
WP_004152452.1\|1434581_1434878_-	hypothetical protein	T1SA06	Salmonella_phage	6.2e-25	65.5
WP_004221284.1\|1435029_1437399_+\|tail	phage tail fibers	A0A2H5BN49	Klebsiella_phage	9.1e-268	79.5
WP_004229092.1\|1437407_1437560_+	hypothetical protein	A0A2H5BN82	Klebsiella_phage	1.9e-06	54.3
WP_004146394.1\|1437683_1438088_+	membrane protein	T1SA79	Salmonella_phage	9.3e-56	84.1
WP_004146393.1\|1438074_1438380_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	82.4
WP_004152706.1\|1438369_1438999_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	3.1e-90	76.4
WP_004152707.1\|1438995_1439478_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	3.0e-61	80.6
WP_004152009.1\|1439697_1441566_-	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
WP_004162150.1\|1441549_1442728_-	anaerobic sulfatase maturase	NA	NA	NA	NA
WP_002913847.1\|1443021_1444254_-	MFS transporter	NA	NA	NA	NA
WP_004221278.1\|1444327_1445239_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004174861.1\|1445335_1445509_-	DUF2633 family protein	G9L6F2	Escherichia_phage	1.4e-16	78.8
WP_002913841.1\|1445879_1448108_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_002913839.1\|1448161_1449694_-	exopolyphosphatase	NA	NA	NA	NA
WP_002913838.1\|1449697_1451758_-	polyphosphate kinase 1	NA	NA	NA	NA
WP_004152007.1\|1451938_1452580_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-28	41.1
WP_002913836.1\|1452576_1453614_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
WP_002913833.1\|1453877_1454771_+	ROK family protein	NA	NA	NA	NA
WP_002913829.1\|1454780_1456214_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_002913827.1\|1456431_1457058_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002913824.1\|1457153_1458440_+	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
WP_020947395.1\|1458538_1459240_+	DnaA inactivator Hda	NA	NA	NA	NA
WP_002913812.1\|1459236_1460148_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8

DBSCAN-SWA_4

1771624 : 1778531

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175147.1\|1771624_1772488_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_002912638.1\|1772498_1773272_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-25	36.3
WP_004151134.1\|1773514_1774411_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_002912635.1\|1774653_1776015_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	2.5e-206	94.5
WP_002912634.1\|1776333_1777056_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	6.4e-31	33.2
WP_004151135.1\|1777052_1778531_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	1.1e-29	28.3

DBSCAN-SWA_5

1815098 : 1822723

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152488.1\|1815098_1816505_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7
WP_004152487.1\|1816729_1817794_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.4e-105	55.0
WP_004152486.1\|1817820_1818690_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.8e-111	67.0
WP_004152485.1\|1818721_1819612_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	33.6
WP_004152484.1\|1819626_1820181_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.8e-52	58.2
WP_004152483.1\|1820361_1821528_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_004152482.1\|1821721_1822723_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.2e-30	28.6

DBSCAN-SWA_6

2194390 : 2251168

Staphylococcus_phage(15.38%)

transposase,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002910830.1\|2194390_2195137_+\|protease	proteasome-type protease	NA	NA	NA	NA
WP_002910809.1\|2195575_2196562_+	fatty acid desaturase	NA	NA	NA	NA
WP_077274528.1\|2196554_2197397_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_002910767.1\|2197340_2197514_-	hypothetical protein	NA	NA	NA	NA
WP_004219597.1\|2197811_2197955_-	hypothetical protein	NA	NA	NA	NA
WP_002910764.1\|2198131_2199073_+	transcriptional regulator TdcA	NA	NA	NA	NA
WP_002910762.1\|2199166_2200156_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_004145486.1\|2200181_2201513_+	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_002910759.1\|2201540_2202749_+	propionate kinase	NA	NA	NA	NA
WP_004152312.1\|2202777_2205072_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	2.3e-159	41.8
WP_004225356.1\|2205123_2205270_-	hypothetical protein	NA	NA	NA	NA
WP_002910729.1\|2205559_2206618_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002910727.1\|2206727_2207642_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_002910725.1\|2207651_2208929_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_002910722.1\|2208925_2209801_+	ATP-binding cassette domain-containing protein	A0A285PWH2	Cedratvirus	1.5e-10	25.5
WP_002910721.1\|2209797_2210517_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-11	26.0
WP_002910720.1\|2210522_2211416_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910719.1\|2211699_2213343_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	9.8e-136	50.4
WP_002910717.1\|2213392_2213869_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002910715.1\|2213967_2214894_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152313.1\|2215197_2216493_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.3e-61	36.8
WP_004899032.1\|2216504_2217314_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004152315.1\|2217288_2218188_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910657.1\|2218297_2218780_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_002910654.1\|2218970_2219669_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_002910652.1\|2219694_2220234_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_002910650.1\|2220348_2220678_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_002910645.1\|2221246_2222587_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004152316.1\|2222583_2223237_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004152317.1\|2223240_2224938_+	OmpA family protein	NA	NA	NA	NA
WP_004152319.1\|2227901_2229257_+	S-type pyocin domain-containing protein	NA	NA	NA	NA
WP_002910593.1\|2229257_2229767_+	hypothetical protein	NA	NA	NA	NA
WP_002910591.1\|2229763_2230270_+	hypothetical protein	NA	NA	NA	NA
WP_002910589.1\|2230364_2230517_+	hypothetical protein	NA	NA	NA	NA
WP_002910586.1\|2230506_2231016_+	hypothetical protein	NA	NA	NA	NA
WP_001339197.1\|2231532_2232741_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_022644641.1\|2233959_2234928_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	6.5e-180	96.3
WP_004199326.1\|2235069_2235252_+	hypothetical protein	NA	NA	NA	NA
WP_004153085.1\|2235248_2235578_+	hypothetical protein	NA	NA	NA	NA
WP_002910551.1\|2235574_2236081_+	hypothetical protein	NA	NA	NA	NA
WP_002910547.1\|2237596_2237902_+	hypothetical protein	NA	NA	NA	NA
WP_002910544.1\|2237923_2238817_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	6.7e-14	30.5
WP_004217423.1\|2238862_2238979_+	hypothetical protein	NA	NA	NA	NA
WP_004152633.1\|2239000_2239894_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.7e-12	27.3
WP_038435084.1\|2239919_2240048_+	hypothetical protein	NA	NA	NA	NA
WP_002910539.1\|2240069_2240963_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	2.8e-12	27.1
WP_004152632.1\|2241138_2242029_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	4.1e-11	29.8
WP_000019473.1\|2242365_2243346_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_171815252.1\|2243403_2243706_+	hypothetical protein	NA	NA	NA	NA
WP_072093174.1\|2243966_2244152_+	hypothetical protein	NA	NA	NA	NA
WP_002910497.1\|2244449_2244716_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_004198077.1\|2244719_2245877_+	hypothetical protein	NA	NA	NA	NA
WP_004152262.1\|2245860_2249271_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_002910495.1\|2249404_2251168_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_7

3567546 : 3660503

Salmonella_phage(58.62%)

terminase,head,capsid,protease,lysis,plate,tail,portal,integrase,tRNA

attL 3623072:3623090|attR 3660578:3660596

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002898139.1\|3567546_3568839_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
WP_002898137.1\|3568929_3570273_-	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	7.3e-81	40.8
WP_002898132.1\|3570281_3570893_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_004150846.1\|3571015_3575269_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
WP_000228469.1\|3575404_3575899_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_002898019.1\|3576431_3577400_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.2e-62	44.0
WP_002898017.1\|3577514_3579281_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
WP_004150847.1\|3579281_3581003_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	3.4e-14	22.4
WP_002898014.1\|3581047_3581749_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3582102_3582321_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3582441_3584721_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3584751_3585069_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3585394_3585616_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3585692_3587633_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896440.1\|3587629_3588745_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_002896437.1\|3588891_3590550_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_002896434.1\|3590969_3591665_+	aquaporin Z	NA	NA	NA	NA
WP_004147773.1\|3591780_3592680_+	lysine exporter LysO family protein	NA	NA	NA	NA
WP_002896412.1\|3592823_3594476_+	hydroxylamine reductase	NA	NA	NA	NA
WP_002896410.1\|3594486_3595455_+	NADH oxidoreductase	NA	NA	NA	NA
WP_002896408.1\|3595666_3596101_-	DoxX family protein	NA	NA	NA	NA
WP_002896406.1\|3596252_3597971_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_002896404.1\|3598009_3599011_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_002896401.1\|3599021_3600464_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_002896399.1\|3600551_3601565_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_002896397.1\|3601561_3602392_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
WP_004150851.1\|3602423_3603563_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_002896394.1\|3604440_3604956_+	lipoprotein	NA	NA	NA	NA
WP_002896392.1\|3605182_3605911_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
WP_002896390.1\|3605931_3606663_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896386.1\|3606669_3607386_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_004150852.1\|3607385_3608054_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_002896384.1\|3608237_3608969_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896382.1\|3609011_3610484_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
WP_002896380.1\|3610480_3611197_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-34	36.9
WP_002896378.1\|3611275_3612403_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
WP_002896376.1\|3612444_3612933_-	DUF2593 family protein	NA	NA	NA	NA
WP_002896372.1\|3612990_3613836_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_002896371.1\|3613832_3614786_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_002896370.1\|3614796_3615930_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	2.2e-30	34.9
WP_002896368.1\|3616093_3617206_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_002896365.1\|3617554_3618034_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_002896363.1\|3618122_3619025_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
WP_002896354.1\|3619846_3620134_-	YbjC family protein	NA	NA	NA	NA
WP_002896352.1\|3620336_3620600_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
WP_002896351.1\|3620606_3620990_-	membrane protein	NA	NA	NA	NA
WP_004179131.1\|3621256_3622942_+	aspartate:alanine antiporter	NA	NA	NA	NA
3623072:3623090	attL	NA	NA	NA	NA
WP_000972391.1\|3623161_3623380_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_002896225.1\|3623471_3624572_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_002896224.1\|3624568_3625054_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_014342962.1\|3625050_3627444_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	1.1e-106	44.0
WP_002896220.1\|3627670_3627790_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_002896204.1\|3627804_3628104_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896201.1\|3628156_3628672_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896193.1\|3628681_3629854_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896191.1\|3629992_3631069_-\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896188.1\|3631098_3631302_-	hypothetical protein	NA	NA	NA	NA
WP_171482189.1\|3631298_3631673_-	hypothetical protein	NA	NA	NA	NA
WP_019724930.1\|3632033_3632768_-	hypothetical protein	NA	NA	NA	NA
WP_004150856.1\|3634986_3635586_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_002896182.1\|3635578_3636487_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_002896179.1\|3636473_3636836_-	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
WP_002896177.1\|3636832_3637405_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_004150857.1\|3637499_3638192_+	hypothetical protein	NA	NA	NA	NA
WP_002896175.1\|3638188_3638635_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_002896172.1\|3638627_3639059_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896170.1\|3639021_3639168_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	6.0e-13	76.1
WP_002896168.1\|3639154_3639583_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896163.1\|3639579_3639963_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896161.1\|3639967_3640477_-	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896158.1\|3640457_3640673_-	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896155.1\|3640676_3640880_-\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896151.1\|3640879_3641344_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_000059191.1\|3641439_3642090_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_077274541.1\|3642093_3643152_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	7.1e-180	92.8
WP_002895967.1\|3643168_3644002_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_004150858.1\|3644144_3645911_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895959.1\|3645910_3646936_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004199124.1\|3646997_3648740_-	AIPR family protein	NA	NA	NA	NA
WP_000700647.1\|3649015_3649693_-	hypothetical protein	NA	NA	NA	NA
WP_001217575.1\|3649807_3650041_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154434.1\|3650051_3650240_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_032413214.1\|3650393_3652814_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.3
WP_004150863.1\|3652810_3653668_-	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
WP_000752622.1\|3653664_3653892_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_004150864.1\|3653891_3654125_-	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000963473.1\|3654192_3654534_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_000956179.1\|3654497_3654698_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000460893.1\|3654705_3655215_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000188448.1\|3655247_3655469_-	hypothetical protein	NA	NA	NA	NA
WP_004152885.1\|3655614_3656493_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
WP_004150866.1\|3656504_3657449_+	hypothetical protein	NA	NA	NA	NA
WP_004178082.1\|3657547_3659035_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_014342959.1\|3659522_3660503_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.4e-97	57.2
3660578:3660596	attR	NA	NA	NA	NA

DBSCAN-SWA_8

4315175 : 4326829

Enterobacteria_phage(70.0%)

integrase

attL 4315625:4315639|attR 4338682:4338696

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004144574.1\|4315175_4316279_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
4315625:4315639	attL	NA	NA	NA	NA
WP_002889940.1\|4316289_4317543_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_002889938.1\|4317895_4319086_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_004152029.1\|4319073_4320024_+	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_004152979.1\|4320023_4320449_+	hypothetical protein	NA	NA	NA	NA
WP_002889930.1\|4321017_4321584_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_002889919.1\|4321601_4321847_-	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_002889917.1\|4321843_4322581_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
WP_002889915.1\|4323122_4323389_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_072028197.1\|4323391_4323943_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889911.1\|4323939_4324167_+	hypothetical protein	NA	NA	NA	NA
WP_002889897.1\|4324163_4324484_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889890.1\|4324495_4326829_+	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
4338682:4338696	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4796409 : 4802234

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152207.1\|4796409_4798743_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
WP_004152206.1\|4798757_4799078_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_004152205.1\|4799074_4799302_-	hypothetical protein	NA	NA	NA	NA
WP_072093163.1\|4799298_4799841_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
WP_000556592.1\|4799843_4800110_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.0e-30	71.6
WP_004152204.1\|4800670_4801408_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
WP_004152203.1\|4801404_4801650_+	ogr/Delta-like zinc finger family protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152202.1\|4801667_4802234_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8

DBSCAN-SWA_10

5212910 : 5260499

Salmonella_phage(35.42%)

terminase,tail,holin,integrase

attL 5206928:5206944|attR 5250791:5250807

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5206928:5206944	attL	NA	NA	NA	NA
WP_004152055.1\|5212910_5214737_-	ATP-dependent DNA helicase RecQ	A0A1V0SBK0	Catovirus	5.7e-84	37.8
WP_002883408.1\|5214804_5215665_-	phospholipase A	NA	NA	NA	NA
WP_002883404.1\|5215817_5216282_+	thioesterase family protein	NA	NA	NA	NA
WP_004152549.1\|5216877_5218128_+\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	1.4e-206	85.3
WP_004152548.1\|5218144_5218336_-	hypothetical protein	NA	NA	NA	NA
WP_004152547.1\|5218332_5218515_-	hypothetical protein	NA	NA	NA	NA
WP_004152546.1\|5218511_5219105_-	adenine methylase	T1SA14	Salmonella_phage	4.3e-110	92.4
WP_004152545.1\|5219101_5219260_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.9e-17	78.8
WP_004153052.1\|5219252_5219546_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.9e-32	71.1
WP_004152543.1\|5219655_5219904_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	1.1e-27	69.5
WP_004152541.1\|5220986_5221886_-	YqaJ viral recombinase family protein	Q858E0	Salmonella_phage	1.5e-159	93.0
WP_004164029.1\|5221882_5222182_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004164037.1\|5222178_5222328_-	hypothetical protein	G9L6A5	Escherichia_phage	7.9e-13	84.2
WP_004152538.1\|5223281_5223515_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152537.1\|5223660_5223870_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004207253.1\|5223869_5224637_+	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_004152535.1\|5224633_5225419_+	replication protein	A0A193GYX1	Enterobacter_phage	8.2e-133	87.4
WP_004152534.1\|5225538_5225886_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	5.0e-50	82.6
WP_004152532.1\|5226078_5226489_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	3.1e-14	42.2
WP_004152531.1\|5226472_5226664_+	hypothetical protein	NA	NA	NA	NA
WP_004152530.1\|5226660_5227086_+	hypothetical protein	NA	NA	NA	NA
WP_004152529.1\|5227082_5227826_+	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-19	59.5
WP_004152528.1\|5227825_5227996_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.5e-15	69.6
WP_004141386.1\|5227996_5228209_+	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_004152527.1\|5228205_5228874_+	DUF551 domain-containing protein	Q6UAT8	Klebsiella_phage	1.5e-05	52.5
WP_004152526.1\|5228866_5229106_+	hypothetical protein	G8C7S3	Escherichia_phage	4.6e-10	48.0
WP_004152525.1\|5229105_5229444_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	4.7e-45	80.0
WP_004152524.1\|5229518_5229776_+	hypothetical protein	NA	NA	NA	NA
WP_004152523.1\|5229853_5230438_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.4e-89	88.1
WP_004154331.1\|5230434_5231910_+	hypothetical protein	Q858H3	Salmonella_phage	3.8e-280	93.1
WP_004152449.1\|5231976_5232288_-	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	2.5e-16	45.2
WP_004141368.1\|5233089_5233296_+	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
WP_004152447.1\|5233310_5234993_+\|tail	tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	2.3e-265	84.6
WP_004152446.1\|5234989_5235286_+	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
WP_004152445.1\|5235288_5235969_+	peptidase	G9L6C4	Escherichia_phage	4.0e-75	83.5
WP_032413483.1\|5235983_5236970_+	phage protein	A0A193GZ49	Enterobacter_phage	2.5e-179	94.2
WP_004152443.1\|5237023_5237461_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	4.8e-66	91.0
WP_004152442.1\|5237471_5237813_+	hypothetical protein	G9L6C7	Escherichia_phage	4.0e-36	70.8
WP_004152441.1\|5237863_5238187_+	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
WP_004152440.1\|5238186_5238792_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	2.8e-88	78.5
WP_004152439.1\|5238791_5241290_+	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.0
WP_004152438.1\|5241289_5241754_+	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
WP_004152437.1\|5241753_5242293_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	6.1e-71	80.0
WP_077274554.1\|5242303_5245135_+	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	75.6
WP_004152435.1\|5245134_5247045_+	hypothetical protein	Q858F9	Salmonella_phage	5.2e-290	81.9
WP_004152434.1\|5247044_5249810_+	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	94.5
WP_071531206.1\|5249952_5250336_+	hypothetical protein	NA	NA	NA	NA
WP_004152433.1\|5250421_5251111_-	hypothetical protein	G9L6E2	Escherichia_phage	1.6e-79	65.2
5250791:5250807	attR	NA	NA	NA	NA
WP_004152432.1\|5251425_5251722_-	hypothetical protein	A0A0F6R8M4	Escherichia_coli_O157_typing_phage	1.1e-24	64.0
WP_004207261.1\|5251878_5254245_+	hypothetical protein	A0A2H5BN49	Klebsiella_phage	9.1e-268	79.5
WP_004229092.1\|5254253_5254406_+	hypothetical protein	A0A2H5BN82	Klebsiella_phage	1.9e-06	54.3
WP_004146394.1\|5254529_5254934_+	membrane protein	T1SA79	Salmonella_phage	9.3e-56	84.1
WP_004146393.1\|5254920_5255226_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	82.4
WP_004152706.1\|5255215_5255845_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	3.1e-90	76.4
WP_004152707.1\|5255841_5256324_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	3.0e-61	80.6
WP_002883400.1\|5257030_5257981_-	magnesium/cobalt transporter CorA	NA	NA	NA	NA
WP_002883398.1\|5258336_5260499_-	DNA helicase II	A7KV33	Bacillus_phage	6.0e-117	37.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP015395

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7713 : 55909

Escherichia_phage(21.43%)

bacteriocin,transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001339197.1\|7713_8922_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_004152343.1\|9334_12592_+	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_004152342.1\|12596_13865_+\|transposase	ISL3-like element ISKpn25 family transposase	Q6V7R1	Burkholderia_virus	5.2e-60	34.7
WP_004152341.1\|13984_14458_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_011977773.1\|14549_14780_+	hypothetical protein	NA	NA	NA	NA
WP_004152340.1\|15671_16454_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.6e-51	90.2
WP_004152339.1\|16453_16786_-	hypothetical protein	NA	NA	NA	NA
WP_004171440.1\|16792_17191_-	hypothetical protein	NA	NA	NA	NA
WP_004152337.1\|17216_17546_-	hypothetical protein	NA	NA	NA	NA
WP_004152336.1\|17573_17882_-	hypothetical protein	NA	NA	NA	NA
WP_004153649.1\|17927_18134_-	hypothetical protein	NA	NA	NA	NA
WP_072093212.1\|18368_18830_-	hypothetical protein	NA	NA	NA	NA
WP_001261282.1\|18786_19017_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001044770.1\|19013_19430_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_004152334.1\|19503_20214_+	AAA family ATPase	NA	NA	NA	NA
WP_072093211.1\|20945_21071_+	mercury transporter	NA	NA	NA	NA
WP_001340589.1\|21106_21529_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_000105636.1\|21580_23275_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001277456.1\|23292_23655_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000993386.1\|23651_23888_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001300294.1\|23923_24592_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000027057.1\|26502_27363_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001067855.1\|29106_29811_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004152403.1\|29883_32781_+\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	2.7e-181	37.7
WP_004152402.1\|32869_33490_+	recombinase family protein	A0A219Y912	Aeromonas_phage	2.0e-09	31.5
WP_004152400.1\|34655_35015_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.6e-19	62.0
WP_004152398.1\|35518_36703_+\|transposase	ISAs1-like element ISKpn31 family transposase	NA	NA	NA	NA
WP_004152397.1\|36979_38299_+\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_004199234.1\|38548_39430_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
WP_004152394.1\|39717_40497_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004199214.1\|40493_41519_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152392.1\|41625_44655_-\|transposase	IS3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004152391.1\|44764_46480_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001404092.1\|46774_46930_+	hypothetical protein	NA	NA	NA	NA
WP_001145103.1\|46978_47971_+	hypothetical protein	NA	NA	NA	NA
WP_004152390.1\|47997_48159_+	hypothetical protein	NA	NA	NA	NA
WP_004152389.1\|48367_48979_-	DUF2913 family protein	NA	NA	NA	NA
WP_004152388.1\|48962_49526_-	hypothetical protein	NA	NA	NA	NA
WP_004152292.1\|50744_51602_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_004171457.1\|51594_51672_-	RepA leader peptide Tap	NA	NA	NA	NA
WP_004199332.1\|51888_52167_-	replication regulatory protein RepA	NA	NA	NA	NA
WP_009485932.1\|52487_52967_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	9.8e-20	35.2
WP_004152296.1\|53307_53586_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_004178051.1\|53587_55909_-\|bacteriocin	klebicin B-related nuclease bacteriocin	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP015396

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4233 : 63078

Salmonella_phage(20.0%)

lysis,transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077274559.1\|4233_5385_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	4.1e-173	95.0
WP_000443938.1\|5409_6861_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_009309939.1\|6853_8896_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_009309938.1\|9082_14818_+	DUF4011 domain-containing protein	NA	NA	NA	NA
WP_020802676.1\|15279_18177_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	5.5e-182	37.8
WP_000509966.1\|18271_18877_+	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	5.5e-20	35.3
WP_004194048.1\|19536_20718_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.9e-120	64.2
WP_000091613.1\|21144_21459_-	hypothetical protein	NA	NA	NA	NA
WP_000215515.1\|21713_22070_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001293886.1\|22059_22461_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001247892.1\|22457_22748_-	nucleotidyltransferase	NA	NA	NA	NA
WP_015065644.1\|22822_25789_+\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.2
WP_000427623.1\|25867_26872_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_004197809.1\|27053_27257_-	hypothetical protein	NA	NA	NA	NA
WP_004197808.1\|27270_27474_-	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_004197807.1\|27507_27876_-	hypothetical protein	NA	NA	NA	NA
WP_020802777.1\|27919_28414_-	hypothetical protein	NA	NA	NA	NA
WP_020317495.1\|28444_29020_-	hypothetical protein	NA	NA	NA	NA
WP_020804424.1\|29007_29277_-	hypothetical protein	NA	NA	NA	NA
WP_020315560.1\|29713_30403_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_004193995.1\|30434_31124_-	hypothetical protein	NA	NA	NA	NA
WP_020801688.1\|31669_32614_+	hypothetical protein	NA	NA	NA	NA
WP_074192992.1\|32722_33115_+	hypothetical protein	NA	NA	NA	NA
WP_020801687.1\|33165_33951_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.9e-52	90.4
WP_020804422.1\|33968_34334_-	hypothetical protein	NA	NA	NA	NA
WP_001568031.1\|34872_35628_+	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	2.0e-136	96.0
WP_017901447.1\|36620_37253_+	ParA family protein	A0A0K1LMB9	Rhodobacter_phage	1.8e-29	39.6
WP_017901448.1\|37252_37627_+	hypothetical protein	NA	NA	NA	NA
WP_020801689.1\|37866_38841_+	StbA protein	A0A222YXF2	Escherichia_phage	1.5e-70	44.2
WP_020801683.1\|38844_39237_+	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_146642489.1\|39594_39822_+	hypothetical protein	NA	NA	NA	NA
WP_016809156.1\|39867_40836_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	3.9e-185	99.1
WP_023317809.1\|42022_42247_+	hypothetical protein	NA	NA	NA	NA
WP_077274560.1\|43213_44569_+	DUF3560 domain-containing protein	NA	NA	NA	NA
WP_042922559.1\|44616_45180_+	methyltransferase	A0A2I7RHK4	Vibrio_phage	9.7e-19	34.3
WP_032425974.1\|45367_45580_+	hypothetical protein	NA	NA	NA	NA
WP_020802172.1\|46509_47022_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	8.5e-54	84.7
WP_004152655.1\|47069_47312_+	DUF905 domain-containing protein	NA	NA	NA	NA
WP_020802171.1\|47380_49390_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	2.7e-26	27.7
WP_001067855.1\|49558_50263_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004178188.1\|51104_52790_+	cloacin	NA	NA	NA	NA
WP_004152553.1\|52799_53057_+	cloacin	NA	NA	NA	NA
WP_004152552.1\|53141_53291_+\|lysis	colicin release lysis protein	NA	NA	NA	NA
WP_004178196.1\|54771_56736_+	TraM recognition domain-containing protein	NA	NA	NA	NA
WP_004152551.1\|56735_57467_+	replication-relaxation family protein	NA	NA	NA	NA
WP_004153058.1\|57473_58004_+	hypothetical protein	NA	NA	NA	NA
WP_000165971.1\|58031_58211_-	Rop family plasmid primer RNA-binding protein	NA	NA	NA	NA
WP_000312627.1\|58279_58657_+	hypothetical protein	NA	NA	NA	NA
WP_001146176.1\|58718_59018_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_000072676.1\|59007_59271_-	hypothetical protein	NA	NA	NA	NA
WP_001254601.1\|59576_59996_-	Exc2 family lipoprotein	NA	NA	NA	NA
WP_001143775.1\|60072_63078_-\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	99.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015394

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP015393

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP015392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP015395

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

5. NZ_CP015396

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection