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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP019045 Halioglobus pacificus strain RR3-57 plasmid pRR3-57, complete sequence 0 crisprs NA 0 0 2 0
NZ_CP019046 Halioglobus pacificus strain RR3-57 chromosome, complete genome 2 crisprs DEDDh,DinG,csa3,Cas9_archaeal,cas3,PrimPol,WYL 0 0 3 0

Results visualization

1. NZ_CP019046
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019046_1 795704-795829 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019046_2 4482752-4482899 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1666469 : 1675160 8 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_2 3872928 : 3936079 42 Tetraselmis_virus(40.0%) tRNA,protease,transposase,integrase attL 3924508:3924523|attR 3946403:3946418
DBSCAN-SWA_3 4497953 : 4559957 51 Pseudomonas_phage(40.0%) protease,integrase,holin attL 4500158:4500204|attR 4511549:4511595
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP019045
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 27965 : 87812 46 Leptospira_phage(25.0%) integrase,transposase attL 77587:77603|attR 93986:94002
DBSCAN-SWA_2 102306 : 150642 49 Ralstonia_phage(12.5%) integrase,transposase attL 110832:110847|attR 144396:144411
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage