CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019120	Lactobacillus delbrueckii subsp. bulgaricus strain DSM 20080 chromosome, complete genome	2 crisprs	DEDDh,cas1,cas2,csn2,DinG,csa3,cas3,Cas14u_CAS-V,cas14j,c2c9_V-U4,WYL	0	13	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019120_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019120_1

685782-685908

Orphan

Consensus_repeat	Method
CTGAGGCTAGAGCCGGTGAAGTTGACCCGGAGGCCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019120_1

>merge|NZ_CP019120|1|685782-685908|CRISPRCasFinder
CTGAGGCTAGAGCCGGTGAAGTTGACCCGGAGGCCGTTTGGGCCGGGCTGAGGATTCTACCTAAGCGCTCAGCTCCTTCATCGATCTGACTGAGGCTAGAGCCGGTGAAGTTGACCCGGAGGCCGTT

>NZ_CP019120|1|1|685782-685908|CRISPRCasFinder
CTGAGGCTAGAGCCGGTGAAGTTGACCCGGAGGCCGTT	TGGGCCGGGCTGAGGATTCTACCTAAGCGCTCAGCTCCTTCATCGATCTGA
CTGAGGCTAGAGCCGGTGAAGTTGACCCGGAGGCCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019120.1\|WP_076026336.1\|687145_688060_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP019120.1\|WP_002879191.1\|690210_690684_+\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NZ_CP019120.1\|WP_014564793.1\|692999_693950_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|240655
NZ_CP019120.1\|WP_003619779.1\|697061_698864_+\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP019120.1\|WP_003619775.1\|694024_695794_+\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|273594
NZ_CP019120.1\|WP_076026334.1\|685081_685480_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase	unknown	unknown	gnl\|CDD\|180601
NZ_CP019120.1\|WP_003619266.1\|673635_674349_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP019120.1\|WP_076026333.1\|683534_684758_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NZ_CP019120.1\|WP_014564791.1\|688293_689991_+\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|183534
NZ_CP019120.1\|WP_076026331.1\|674471_675869_+\|flavocytochrome-c	unknown	unknown	gnl\|CDD\|180584
NZ_CP019120.1\|WP_041814282.1\|692023_692998_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|368185
NZ_CP019120.1\|WP_003619769.1\|690695_691895_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
NZ_CP019120.1\|WP_003614004.1\|698932_700255_+\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237046
NZ_CP019120.1\|WP_076026330.1\|668881_671290_+\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319795
NZ_CP019120.1\|WP_003619256.1\|667389_668346_+\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|213790
NZ_CP019120.1\|WP_003619264.1\|672583_673639_+\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_CP019120.1\|WP_003623585.1\|671686_672547_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP019120.1\|WP_003619777.1\|695850_696789_-\|nucleoside-hydrolase	unknown	unknown	gnl\|CDD\|239113
NZ_CP019120.1\|WP_003619258.1\|668359_668848_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932
NZ_CP019120.1\|WP_076026332.1\|676046_677693_+\|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl\|CDD\|236471

Protein	Function_ID	Function_description	E-value
NZ_CP019120.1\|WP_076026336.1\|687145_688060_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.31065e-45
NZ_CP019120.1\|WP_002879191.1\|690210_690684_+\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	2.54214e-36
NZ_CP019120.1\|WP_014564793.1\|692999_693950_+\|dihydrofolate-reductase	gnl\|CDD\|240655	cd12178, 2-Hacid_dh_13, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	4.69929e-170
NZ_CP019120.1\|WP_003619779.1\|697061_698864_+\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_CP019120.1\|WP_003619775.1\|694024_695794_+\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP019120.1\|WP_076026334.1\|685081_685480_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase	gnl\|CDD\|180601	PRK06520, PRK06520, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase.	2.3004e-36
NZ_CP019120.1\|WP_003619266.1\|673635_674349_+\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	1.39608e-87
NZ_CP019120.1\|WP_076026333.1\|683534_684758_-\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	7.16742e-32
NZ_CP019120.1\|WP_014564791.1\|688293_689991_+\|arginine--tRNA-ligase	gnl\|CDD\|183534	PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed.	0
NZ_CP019120.1\|WP_076026331.1\|674471_675869_+\|flavocytochrome-c	gnl\|CDD\|180584	PRK06481, PRK06481, flavocytochrome c.	0
NZ_CP019120.1\|WP_041814282.1\|692023_692998_+\|amidohydrolase	gnl\|CDD\|368185	pfam04909, Amidohydro_2, Amidohydrolase. These proteins are amidohydrolases that are related to pfam01979.	5.91454e-28
NZ_CP019120.1\|WP_003619769.1\|690695_691895_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	1.52893e-169
NZ_CP019120.1\|WP_003614004.1\|698932_700255_+\|GTPase-ObgE	gnl\|CDD\|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	0
NZ_CP019120.1\|WP_076026330.1\|668881_671290_+\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
NZ_CP019120.1\|WP_003619256.1\|667389_668346_+\|thymidylate-synthase	gnl\|CDD\|213790	TIGR03284, thym_sym, thymidylate synthase. Members of this protein family are thymidylate synthase, an enzyme that produces dTMP from dUMP. In prokaryotes, its gene usually is found close to that for dihydrofolate reductase, and in some systems the two enzymes are found as a fusion protein. This model excludes a set of related proteins (TIGR03283) that appears to replace this family in archaeal methanogens, where tetrahydrofolate is replaced by tetrahydromethanopterin. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP019120.1\|WP_003619264.1\|672583_673639_+\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	6.10644e-145
NZ_CP019120.1\|WP_003623585.1\|671686_672547_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	8.01588e-95
NZ_CP019120.1\|WP_003619777.1\|695850_696789_-\|nucleoside-hydrolase	gnl\|CDD\|239113	cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. Nucleoside hydrolases vary in their substrate specificity. This group contains eukaryotic and bacterial proteins similar to the purine specific inosine-adenosine-guanosine-preferring nucleoside hydrolase (IAG-NH) from T. vivax. T. vivax IAG-NH is of the order of a thousand to ten thousand fold more specific towards the naturally occurring purine nucleosides, than towards the pyrimidine nucleosides. .	8.3752e-142
NZ_CP019120.1\|WP_003619258.1\|668359_668848_+\|dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	6.78187e-80
NZ_CP019120.1\|WP_076026332.1\|676046_677693_+\|phosphoenolpyruvate-carboxykinase-(ATP)	gnl\|CDD\|236471	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase.	2.95731e-07

>NZ_CP019120.1|WP_076026334.1|685081_685480_-|5-methyltetrahydropteroyltriglutamate---homocysteine-methyltransferase
MDITLHFCQGNLRSKKFYDAKYDGLVDTVFQLPFSGFFMEFDDEKYCNFSLLEKRQGQKIVLGLVNTQSDELEDKEVLLKRLEEANKHVDPKQICIATQCGFASTEAGNLISEEGQWRKLDLVHELAESLNA
>NZ_CP019120.1|WP_076026333.1|683534_684758_-|IS110-family-transposase
MDLLKTVFGIDVSSRKSNVCIMVNGQKVNDYAISNDMVGFNRLLGDLKQVTKPQIIFEATGVYSRRLQAFLDMHELRYVMMNPLEAKRKTKDDLHQNKTDKLDALYLAKLQSEHPQRLAYVQNKEYQELMANNRIYEQASHDLITNRNRLHKAIQLTFPEIEHLLANPRGKNYWSIALRFPHPDIVLETKEADIIDFLKGLSGIGKKRANDITQSLIRLAKVACPAVKKNSAHIRGLKMAINNILSAEEECQTALQEMAKLAPKRDLEILTSIPGIGENTALRIISELGDIRRFNNPSQLNAFVGVDPQVYESGNLTAHLSISKREAAIGRKVLYLVINQIQSAKKAGNPCHIADYYEKRKRSSETASHKKAAIASIHKLLRTIFALIKNDQLYSYDVAKHNQRLLS
>NZ_CP019120.1|WP_076026332.1|676046_677693_+|phosphoenolpyruvate-carboxykinase-(ATP)
MSTRERYQQSELVKANSKFSRVRATIESAFYGNNVHEVKSVAEAYELAKRQPGVIETDLPILHTSDFGLPVGAKQLVYNHGKILGRTASARHFVDDPEEDAAALTNSLYEDIYAGHEQKYLKTTVLVGLDASFSLKAHLMLQEDQAFNLLSYMLNFRFFDEKAAEMYGKSKLYDEGDLYFYFDPNVTDPAYPNGLAIFDAPHNCAAVFGLLYFGELKKGTLTLTLAWALAHRHGYAACHGGEQAFHFEDKKDKVFAFYGLSGSGKSTLNHADHDGKYDITVLHDDAYIISREDGSSVALEPAYFDKTHDYPAGHHETKYYTTVMNCAVTLDEAGRNVLVTEDLRNNNGRVIKSRYTSANRVDVEENPITALFWIMKDNSLPPVLKVTDLVLATTLGLTLATKRTSAENLPKGFDMNTLGIEPFADPFRAYPVGGDYGDFKELFTKRGAECYVLNTDAFCGKNIPKELTLEIIEKLVDDTDQWQAFGDFAGVSYMPLADYSVDLEYKQNLRAWMQDRLDWLNMYNGEHPKTPLPEEAKECLEKIVSELK
>NZ_CP019120.1|WP_076026331.1|674471_675869_+|flavocytochrome-c
MAKYEFKSSPIDLVNPSYDLVVIGAGGTGLSAALQAHELGASVTVFEKNEVLGGNTSKASSGMNAAESLVQFKHGIIDNKADFYQETLKGGGNLNDEAMLSYFVDHAALAIDWLKQYGVELDDLTITGGMSKKRAHRPASMAPVGGYLITGLLKSIEAARIPVFNKTKVVKVLQDEKGKVTGIDIVGPDGRRKVMAKAVILATGGFGASKEIIKKYRPDLEGYKTTNQAGATGDGLILGEEAGAELVQMDFIQVHPTAQTDGEKTFLIGEAVRGEGAILVNKAGQRFINELDTRKVVSAAITGLNEDGAYLIFDQGVRDHVKAVEFYDHIGLVEHGATLEELAGKIGVDAAGLEATVASWNEAVKGQDDQAFGRTTGMDRDISVAPYFAIHIHPAIHYTMGGLHINPETQVLGKDDKVIEGLYAAGEVSGGLHGNNRIGGNSVAETVVFGRQAGIQASKFVRGEN
>NZ_CP019120.1|WP_003619266.1|673635_674349_+|ABC-transporter-permease
MINGLVHWIAQNFPNIYNLGWTGDTGWGTSVLQIIYMTFWPSIFGGVLGLFFGVILVLTEPGGILENKFWFNFCDKLISILRAIPFIILLAFISPLTRLIVGTEIGDTAALVPLTLGIFPFYARQVQVALESLDPGKVEAAQSLGASNWDIIFDVYLKETRSEIIRVSTVSIISLIGLTAMAGAVGAGGLGTTAIQYGYRDFANDVTFLATVLVVIMIFIVQVVGDFLAKKLNHQHR
>NZ_CP019120.1|WP_003619264.1|672583_673639_+|methionine-ABC-transporter-ATP-binding-protein
MSIVQLDHVSVTFKRKKAADVQAVQDVTLHIEKGDIYGIVGFSGAGKSTLVRTINLLQKPTAGDVVVGGVDFVKDGKQVISGKDLQARRRKIGMIFQQFNLLNETTVIENIAFALKHSDLSDDELEEKCHKLLKLVDLEDKANAYPAQLSGGQQQRVAIARALANDPEILLSDEATSALDPQTTIQILDLLKKLNRELGLTIVLITHEMAAVKKIANKVAVMENGRVVENGNLRDVFLAPKAELTQKFVGGSLAVVDTLKSLNISLAENEALYQLVYSLNNVAKSIIIELYREVGVEASMLYGNVEVLADEPVGTLLVMVKGDADKQKATLKFLSDEGVTVTELDERGNRL
>NZ_CP019120.1|WP_003623585.1|671686_672547_+|ABC-transporter-substrate-binding-protein
MRKKKQRNIIIAIVAVVVLAVIAFFSFGKKGSQQSAKTVTVTVGTVGATKAERAIWKSVAATAKKKYGIIVKTKNFSDYNQPNSALKSGDLDLNAFQHYNFLNNWNKANKSNLVAIGKTYIAPIRLYSLKYKSLKSLPKGATIAIPNDTTNEARALLVLKNAGLITLKGTSATKLYSVADIKNNPKNFKIKEVATEQAARVLKSVDAAVVNNDYANPAGLGDKQTIYVEPINKDSYQWINVIVARKKDKNKKAYKEVVKAYQTEKTKQLYKKYYGIKQVAAWDAKF
>NZ_CP019120.1|WP_076026330.1|668881_671290_+|HAD-IC-family-P-type-ATPase
MKTNLETGLTEEEVAQKSAAGKVNTTIDDEFKTNRQIIVENTFTYFNLIFLVLTILLLIAGDIRDLTFLPVIILNTIVGIVQEIRAKSVLSKLQVLNQTKLLALRGGKRRKVPIDQLVEGDLVLLKAGDQIPADAKVVDGGVRVNESLLTGESDEIAKEVGDELLSGSFVVSGEVMAQLVKVGSESYIAKLTAEAKAMGGGEESKMIRAINRLIKWVGIIIIPMGLALFAQAYFLNHRSFAESISSMEAAIIGMIPEGLYLLTTVALALAAMRLARNQVMLHDMKSVETLARVNVLCVDKTGTITEPKMAVEKVVPAKNYPGNDLEDRLAAYVSNMPVDNITAEALSQKFGQDQPLVNAKRIIPFTSVNKYSGAVFAGYTLLLGAPEMILRSQLKACQEEFARYPEEGYRVLAFAKYPAELADEKERLTQEVEVLGYVLLSNPIRKEAKETFAYFAKQGVEIKVISGDNPVTVSRVAGQAGIAGAEKYIDAQTIKPGEYEQAMAEYNVFGRVKPEQKKEFVQALQKIGKTVAMTGDGVNDILAMKEADCSIAMASGNSAAVQASQVVLLDSNFAKMPQVVNEGRQVVNNIERSAGLFLVKNIFSLLIAVFSLILTINYPIKPAQIALISSFTIGLPSFLLALEKNHSRIRGNFTVNVLTKSIPGGITDWLAVSILVLTNKFTNIGDNEVATASTALLVLVGLMVLFWISRPLNKYKLGVLALSVVCIILSIIFIPGFFKLSPLSGRAVFTVVVLFFAGMTLFRIMSRICDGIKEVSNVLTEKGKDAKLRDLLAAYGKDRDEL
>NZ_CP019120.1|WP_003619258.1|668359_668848_+|dihydrofolate-reductase
MLSYVWAEDEKGAIGYQGRLPWHLPADLAHFKAKTMGHPMLMGRKTFESLPGLLPGRQHVVLSTRKLDLPAGVLQLKSEEEVSAWLKEQAGEVCVIGGSSLFALLADQVDKLEVTRIKGIFSADTYMPNLDWAAFALVKSEAHRADGKNKYDYVFETYLRKK
>NZ_CP019120.1|WP_003619256.1|667389_668346_+|thymidylate-synthase
MANQDQAYLDLLKKIMTEGNDKNDRTGTGTRSLFGAQMRFDLSQGFPILTTKRVPFGLIKSELLWFLRGDTNIRFLLEHKNHIWDEWAFKNWVTSPEYQGPDMTDFGLRSQKDPGFKAVYDEEMQKFCQRILDDEAFAQKYGNLGDVYGAQWRHWGKRDGGFIDQIADVIEQIKTNPDSRRLIVTAWNPEDVPSSALPPCHVLFQFYVADGKLSLQLYQRSGDMFLGVPFNIASYSLLLSLIARETGLEVGEFVHTIGDAHIYKNHFAQVEEQLKRKPFDAPTLWLNPGKKKVADFEMADIKLVNYQHGSTIKAPVAV
>NZ_CP019120.1|WP_076026336.1|687145_688060_+|LysR-family-transcriptional-regulator
MLPFPYLVFQTVIDQGTFNKAAAVLNVTPSAISHSVNQLETELGFPVFVRSRNGVRLTPDGEKILPLIQEIINGQSRLEQVAQQIQGLDTGLIRIGAFSSVCINWLPPLIRNFAKNYPQVKISVRQAGFSEITQAVKSGQLDLGLTMLPENEQGISCEKILEDEIYCIAPKDFQVKNGHSISEEDLVNCNFILQQSDYDLDTKAALDHYSIKSTAISFSIDDQSIVAMVEAGLGLGILPALALQKMQGEVRILPFSTPFYRKIALVTSNQQRLAPSSRQMIKNVHELIRRQYPGGRLTMEAESA
>NZ_CP019120.1|WP_014564791.1|688293_689991_+|arginine--tRNA-ligase
MNGKQLVAEALQAVLPDWSLDDIDVKIERPKDEKLGDYAFPTFTLAKTMRKAPNLIAVELAEKIDQGSFEKVEAVGPYINFFLDKSQTGAAILQEILADPENYGARDLGHGRNVLTEYSSPNIAKPMGMGHLRSTMIGEAIARILAKEGFKPIRIDYLGDWGTQFGKMMAAYKMWGNDADIEKDPINTLLSYYVRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKVYDMLDVHFDSFTGEAFSAQMMDKPIQILREKGLLVKSQGAEIVDLEKYNLPPLMVIKSNGTSTYITRDLATAMYRKKTYGFYKSIYVVGQEQEVYFQQLRACLKEMGFDWADDIVHISFGLMSINGQKMSTRKGNVVNLEDVLNESVDLARKQISEKNVGLKNADEVAKQVGIGAVVFHDLKNYRRNPIDFNLEEVVKFEGETGPYVQYARARGESLLRKSGITDFSDADLTKIGAEEWDLVSFMARYADTIQKAMETYDPSAIAKYALELAKRFNKYYAHTRILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKAPDEM
>NZ_CP019120.1|WP_002879191.1|690210_690684_+|arginine-repressor
MNYKERRQLIYELIQTNKIETQEQLLLLLQAHGANATQATISRDIRALHISKVPDDDGRSYYVKAPSAAVNRERQLKDAIRERVATVTAVQFTVVIQTSMKLTYAPILAGLIDDIDNDDVVGTIAGTDTLLVILKDAEAAASFADWAQAIVKERKIY
>NZ_CP019120.1|WP_003619769.1|690695_691895_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MARISVYMTGGIAAYKAVSVVRGLQKAGHEVRVAMTAKSERFVGPATLAALTKWPVLDDLFSPGRQAEIAHIDLADWSQLALVVPADANILAKLAQGIGDDAVSTTLLALHCPRLIVPSMNSHMWENPAVQRNLRLLKEGGDWIMEPAVGRLAEGYAGKGRMPEAEEILAWVNDQLDLPAKGKRIVVTAGGNLEAIDPVRFIGNRSSGKMGFRLAEAAAKRGAEVDLIYGNVSVPLPRDARIHLHPALSAQAMLEKLEELFPAADALLMAAAVSDWRPKEAADHKLKKQDGVEEMTLQLVKNPDLLKTMAQKKRPDQVVIGFAAETNDLLANASRKLAEKGADLIVANDVSGDAFGGDEDQVTILEQGKELDPWPWMSKQAVADRLLEMTLARLAEKKN
>NZ_CP019120.1|WP_041814282.1|692023_692998_+|amidohydrolase
MKKIDAHLHLVRDLASYKGNGRSNALGNGLVVWDSGFKTRLFPAGWGDDAFRADAARKVMEDHDVAKAVLLQGSLYGFQNYYSWQVAKAAPDRFAPAFSIDPFASEAEKIVKRHVEDLGFRALKLEVSQAGGLMDYHLPFDLAEDDRLGKILDYLSSYPGFAVAVDYGDSSQASHQPRSLARLAKRYPDLDFVLCHLSFPKPGKLDLLEKELALFAPLPNISFDLAALQDIAGEQTYPYPFCQEAVGLAKEIVGAKRLLWGSDAPWSATFNDYGQLYSWLEDAGIFSEAELADVYYGNAERIYFKADHVAALKASRDPLFEGDA
>NZ_CP019120.1|WP_014564793.1|692999_693950_+|dihydrofolate-reductase
MENAKVLVAGLAVRQLPELEKVCEVTFAPAGAGKDWYLANLGDFDALITGKLPVDQELLDAGKKLKIVSATGVGYDHIDVDYASSQGIIVSNCPASVMQPTAEMAFTLLLALSRKLALYNQEMRQGNFLDTGLLENQGQSPVGKTLGIFGMGRIGKTLASYARTFGMNILYHNRHQLPEDEERALGVSYVPLADLLSQADYVSLNAPATAETYHVIDEAALSMMQPTAFLINTSRGSQVDEAALLRALKGKRIAGAGLDVFEEEPDFNKEFCQLDNVILTPHAGSATRESRRSVLKEASHNIVSFLVDGVPVNRVN
>NZ_CP019120.1|WP_003619775.1|694024_695794_+|DNA-helicase-RecQ
MLDPQQVLKKYFGYDSFRPGQREIIEKVFQGKNVLAVMPTGGGKSLCYQIPALMIPGATVVISPLISLMKDQVDSMREYGIPAAALNSSTAQEDVNPILRACYEGKIKLLYVTPERMEMDYFRYQLNFLEVNLVAIDEAHCISQWGHDFRPAYRKLKDGINALHTHPNVLALTATATKAVREDIGQQLDISEENFVITSFERKNLHFKLVNAPKNSRAYIVNYLKQHRGEAGIIYSNTRKKVEGLTEFLRREGFNVAAYHAGMSNEERAQVQDDFQYDRIPLIVATNAFGMGIDKSNVRFVLHANSAKNLEAYYQEAGRAGRDGLESEAVMLFHPSDLRQFRWFIDNSEADESYRQVQYQKLQTISDYANTDECLQQFIVRYFGQDCPPCGKCSNCLNSGDFQDVTAEAQAIIGMVYDLDGRYGKRIVAQAVTGSKVKKISEIGADECVHYGLLKGKKQADVSSLVDYLVSKGYLKLVGDCYPLVHVTNRGWDVLDGKARVKRRQEVKSEQLAETGGDQVLFEELRKARRILAQKRGVPPFVIFSDLSLRDMAARKPQTPEELLQCSGVGDAKLANYGKAMLAVIKKYG
>NZ_CP019120.1|WP_003619777.1|695850_696789_-|nucleoside-hydrolase
MKNFYLNHDSNMDDFTSLLLMLLVPDIKLIGVGVTDADGYVEPGVSASRKLIDRFNQRGDKLEVAKSDSRAVHQFPEAWRVSAFSVDHFPILNEKGTVETPVAAKPAHLDMIDKIHAADGPVTLVFTGPLTDLARALEIDPSIQDKIEELYWMGGSLNAHGNVYAPCADGTQEWNAWWDPEACKTVWDSKIKIQQVGLESTEELPLTDEMRQHFASNRKYPAFEFLGYVYALVNSFEVDSTYYLWDVLTTMSALYPEIATTRDTKSDVYTDGDRAARFFETENGRPMTLVTSANYDKFWERFDDLCEKAKLF
>NZ_CP019120.1|WP_003619779.1|697061_698864_+|excinuclease-ABC-subunit-UvrC
MASQLIENKLKLLPEKAGCYLMKDVNGKVIYVGKSKNLKNRVRSYFKSSQEGRRAELVKNIADYDIIVVDSDKEAFLLEVTLIKKYQPYYNVALKSGTGYPYIEITNEKNPQTRLTSIVYKDKGYYFGPYPNVYAASATLKFIQKVFPLRRCSGYTGRPCLYYHMGQCLGSCFKEVPQSEYDEQIKKIKRFLNGDIQEVKKDLTNKMLQASADLEFERAGELRDQLKYIEETVEKQKIISNDHTQRDIFNYYVDRSWISIQVFFLRQAKLLRRESHMFPLTDETDPEDEFMSFIAQFYAQKNRVNPREVLVPKGIDQDELAAAIGIKVRTPQRGQKASLMEMARENAQLKLDDKFRLLELGQRKTKGAQEEIFKALGLPYGSYIESFDHSHIQGADPVSALVVFKDGEPFKTGYRKFKLKGEVEHQNSADEVGNTREVVRRRYSRLLKEHERMPDLILMDGGQIQVEACEDVLRNELNLDIPVAGMVKDDKHRTNHLLYGDPFKGQPFKLIPMDPKSEGFYLMTRIQDEVHRFAITFHRQTHAKNSLVSRLDSIKGIGPKSRTKLLREFGSLKKIKEASIDDLRKAGLTLTQAQAVKISL
>NZ_CP019120.1|WP_003614004.1|698932_700255_+|GTPase-ObgE
MPTPSTFVDQTKIEVQAGKGGDGMVAFRHEKFMPNGGPAGGDGGRGGSIIFVADNGLRTLMDFRYRRKFKAEPGENGRIKAQYGKAAKDLYLKVPVGTTVYDFFTGEEIGDLVENGQELVVAKGGRGGRGNIHFATSVNTAPEIAENGEPGEFRTLRLELKVLADVGLVGFPSVGKSTLLSVVTSAKPKIAAYQFTTLKPNLGMVLLPDGRDFSMADLPGLIKGASQGVGLGIQFLRHVERTKVILHMVSMDPNNGRDAYEDYETILHELASYTEDDLSSKREIIVASQMDIPGADEKLAQFKKDLAAHGVDQEVYELSSVTHQGVDRLMSRAADLVSEVEAQEAEAAVKPKEEVKTKTYKYHRPEKMEFTVEKLADHEFEIHGEQLERLVAMTNLDHQDGIMRLARRLKKMGVDDELRAQGAVDGDDVYIGDFSFEFVQ

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Crispr_ID: NZ_CP019120_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019120_2

751254-752741

TypeII-A

Consensus_repeat	Method
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	PILER-CR
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CRISPRCasFinder
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CRT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	PILER-CR

22 spacers

csn2,cas2,cas1

The CRISPR arrays of NZ_CP019120_2

>merge|NZ_CP019120|2|751254-752741|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCGCAACAACCAGACGGGTCTTTCGTACCTACGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCGCCGCGCCCACAATGTCAACGATCGCGTCAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCGTTCCCGTGGCCGTCCAGGCTCGCTCCTGGGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCGGGACTTCCAGGGCGACGATGGCGAGCAGCGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGAGCGTTACCGCGTTGCTCAGCATATCGGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGCTGAAGCTTATAAAGAAGCAACGGCAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGCTGAAGCTTATAAAGAAGCAACGGCAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCACCAGCAAGACCAGGAAGCAAGACCAGGAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTCACCAGGCGGCCGGCTACCTACCTTATAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCGACAAATAAGTCTCGTAAAAAGAAAACGAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCCATCCAGTCTGGATCCTTGACCAAGACGTGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCAGCAAGGCGGCAATGACAAGCTGCTGAACAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTCCTTTTTAGCATTTTGCCGCGCAGTCCGTGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCAAAGAAAGGGTCGGACTGGAAGCGGTCAGTGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTTGATTTCCAAATTGATTCAAAGAAATCTGGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTGTAACAAGATTAGAAAAATACTTGAGCCAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCAGATTCCCCTGCAGGAAATAAGATTCCCCTGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTAAGTGATCCATTGTTTAAGCAGCAGCTGCGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTGGTCATGGCTCTAGTAACGTTATACATGGGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCACAGACAATAGCAGATAACCAGGCAACAGAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCACTCTGCTTTCGCTGTAACTAGCTTTTTCGGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCGCTAACGGAATCAATCCAACTGGTTATCGGGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCG

>NZ_CP019120|2|1|751254-751553|PILER-CR
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCAACAACCAGACGGGTCTTTCGTACCTAC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCCGCGCCCACAATGTCAACGATCGCGTCA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GTTCCCGTGGCCGTCCAGGCTCGCTCCTGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GGGACTTCCAGGGCGACGATGGCGAGCAGC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGAGCGTTACCGCGTTGCTCAGCATATCGGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGCTGAAGCTTATAAAGAAGCAACGGCAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGCTGAAGCTTATAAAGAAGCAACGGCAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCACCAGCAAGACCAGGAAGCAAGACCAGGAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTCACCAGGCGGCCGGCTACCTACCTTATAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCGACAAATAAGTCTCGTAAAAAGAAAACGAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCCATCCAGTCTGGATCCTTGACCAAGACGTGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCAGCAAGGCGGCAATGACAAGCTGCTGAACAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTCCTTTTTAGCATTTTGCCGCGCAGTCCGTGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AAAGAAAGGGTCGGACTGGAAGCGGTCAGT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TTGATTTCCAAATTGATTCAAAGAAATCTG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TGTAACAAGATTAGAAAAATACTTGAGCCA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AGATTCCCCTGCAGGAAATAAGATTCCCCT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TAAGTGATCCATTGTTTAAGCAGCAGCTGC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TGGTCATGGCTCTAGTAACGTTATACATGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACAGACAATAGCAGATAACCAGGCAACAGA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACTCTGCTTTCGCTGTAACTAGCTTTTTCG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCTAACGGAATCAATCCAACTGGTTATCGG


>NZ_CP019120|2|2|751254-752741|CRISPRCasFinder
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCAACAACCAGACGGGTCTTTCGTACCTAC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCCGCGCCCACAATGTCAACGATCGCGTCA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GTTCCCGTGGCCGTCCAGGCTCGCTCCTGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GGGACTTCCAGGGCGACGATGGCGAGCAGC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CAGAGCGTTACCGCGTTGCTCAGCATATCG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CAGCTGAAGCTTATAAAGAAGCAACGGCAA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CAGCTGAAGCTTATAAAGAAGCAACGGCAA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACCAGCAAGACCAGGAAGCAAGACCAGGAA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TCACCAGGCGGCCGGCTACCTACCTTATAA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CGACAAATAAGTCTCGTAAAAAGAAAACGA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CCATCCAGTCTGGATCCTTGACCAAGACGT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AGCAAGGCGGCAATGACAAGCTGCTGAACA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TCCTTTTTAGCATTTTGCCGCGCAGTCCGT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AAAGAAAGGGTCGGACTGGAAGCGGTCAGT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TTGATTTCCAAATTGATTCAAAGAAATCTG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TGTAACAAGATTAGAAAAATACTTGAGCCA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AGATTCCCCTGCAGGAAATAAGATTCCCCT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TAAGTGATCCATTGTTTAAGCAGCAGCTGC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TGGTCATGGCTCTAGTAACGTTATACATGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACAGACAATAGCAGATAACCAGGCAACAGA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACTCTGCTTTCGCTGTAACTAGCTTTTTCG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCTAACGGAATCAATCCAACTGGTTATCGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCG

>NZ_CP019120|2|1|751254-752741|CRT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCAACAACCAGACGGGTCTTTCGTACCTAC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCCGCGCCCACAATGTCAACGATCGCGTCA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GTTCCCGTGGCCGTCCAGGCTCGCTCCTGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GGGACTTCCAGGGCGACGATGGCGAGCAGC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CAGAGCGTTACCGCGTTGCTCAGCATATCG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CAGCTGAAGCTTATAAAGAAGCAACGGCAA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CAGCTGAAGCTTATAAAGAAGCAACGGCAA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACCAGCAAGACCAGGAAGCAAGACCAGGAA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TCACCAGGCGGCCGGCTACCTACCTTATAA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CGACAAATAAGTCTCGTAAAAAGAAAACGA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	CCATCCAGTCTGGATCCTTGACCAAGACGT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AGCAAGGCGGCAATGACAAGCTGCTGAACA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TCCTTTTTAGCATTTTGCCGCGCAGTCCGT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AAAGAAAGGGTCGGACTGGAAGCGGTCAGT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TTGATTTCCAAATTGATTCAAAGAAATCTG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TGTAACAAGATTAGAAAAATACTTGAGCCA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AGATTCCCCTGCAGGAAATAAGATTCCCCT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TAAGTGATCCATTGTTTAAGCAGCAGCTGC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TGGTCATGGCTCTAGTAACGTTATACATGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACAGACAATAGCAGATAACCAGGCAACAGA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACTCTGCTTTCGCTGTAACTAGCTTTTTCG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCTAACGGAATCAATCCAACTGGTTATCGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCG

>NZ_CP019120|2|2|752112-752741|PILER-CR
	GCAACAACCAGACGGGTCTTTCGTACCTAC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCCGCGCCCACAATGTCAACGATCGCGTCA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GTTCCCGTGGCCGTCCAGGCTCGCTCCTGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GGGACTTCCAGGGCGACGATGGCGAGCAGC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGAGCGTTACCGCGTTGCTCAGCATATCGGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGCTGAAGCTTATAAAGAAGCAACGGCAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCAGCTGAAGCTTATAAAGAAGCAACGGCAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCACCAGCAAGACCAGGAAGCAAGACCAGGAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTCACCAGGCGGCCGGCTACCTACCTTATAAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCGACAAATAAGTCTCGTAAAAAGAAAACGAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCCCATCCAGTCTGGATCCTTGACCAAGACGTGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCAGCAAGGCGGCAATGACAAGCTGCTGAACAGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCCTCCTTTTTAGCATTTTGCCGCGCAGTCCGTGTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AAAGAAAGGGTCGGACTGGAAGCGGTCAGT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TTGATTTCCAAATTGATTCAAAGAAATCTG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TGTAACAAGATTAGAAAAATACTTGAGCCA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	AGATTCCCCTGCAGGAAATAAGATTCCCCT
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TAAGTGATCCATTGTTTAAGCAGCAGCTGC
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	TGGTCATGGCTCTAGTAACGTTATACATGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACAGACAATAGCAGATAACCAGGCAACAGA
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	ACTCTGCTTTCGCTGTAACTAGCTTTTTCG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC	GCTAACGGAATCAATCCAACTGGTTATCGG
GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019120.1\|WP_076026354.1\|762856_764143_+\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|273080
NZ_CP019120.1\|WP_003619900.1\|758760_759705_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
NZ_CP019120.1\|WP_076026353.1\|759845_762107_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP019120.1\|WP_035162685.1\|750251_750557_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP019120.1\|WP_003619909.1\|764158_766003_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_CP019120.1\|WP_060597960.1\|749362_750274_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP019120.1\|WP_076026347.1\|742189_742804_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|225232
NZ_CP019120.1\|WP_076026345.1\|740356_740560_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019120.1\|WP_003619861.1\|738142_738544_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019120.1\|WP_011543827.1\|742800_743469_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP019120.1\|WP_076026346.1\|741542_741989_+\|FMN-binding-protein	unknown	unknown	gnl\|CDD\|226484
NZ_CP019120.1\|WP_076026350.1\|754199_755426_+\|hydroxymethylglutaryl-CoA-reductase	unknown	unknown	gnl\|CDD\|153082
NZ_CP019120.1\|WP_076026351.1\|755429_756593_+\|hydroxymethylglutaryl-CoA-synthase	unknown	unknown	gnl\|CDD\|213655
NZ_CP019120.1\|WP_076026663.1\|743532_744732_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP019120.1\|WP_003619905.1\|762135_762573_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP019120.1\|WP_076026349.1\|753096_754197_+\|thiolase-family-protein	unknown	unknown	gnl\|CDD\|238383
NZ_CP019120.1\|WP_076026348.1\|750553_751222_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP019120.1\|WP_076026344.1\|738560_738797_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019120.1\|WP_076026352.1\|756757_758116_+\|threonine/serine-exporter-family-protein	unknown	unknown	gnl\|CDD\|377697
NZ_CP019120.1\|WP_003619897.1\|758173_758680_-\|aminoacyl-tRNA-deacylase	unknown	unknown	gnl\|CDD\|237976

Protein	Function_ID	Function_description	E-value
NZ_CP019120.1\|WP_003619900.1\|758760_759705_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	1.78716e-91
NZ_CP019120.1\|WP_076026353.1\|759845_762107_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP019120.1\|WP_076026351.1\|755429_756593_+\|hydroxymethylglutaryl-CoA-synthase	gnl\|CDD\|213655	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.	1.30289e-130
NZ_CP019120.1\|WP_003619909.1\|764158_766003_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_CP019120.1\|WP_060597960.1\|749362_750274_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	7.94292e-95
NZ_CP019120.1\|WP_076026347.1\|742189_742804_+\|GTP-pyrophosphokinase	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	4.701e-62
NZ_CP019120.1\|WP_011543827.1\|742800_743469_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.52982e-66
NZ_CP019120.1\|WP_076026346.1\|741542_741989_+\|FMN-binding-protein	gnl\|CDD\|226484	COG3976, COG3976, Uncharacterized protein conserved in bacteria [Function unknown].	1.51406e-11
NZ_CP019120.1\|WP_076026350.1\|754199_755426_+\|hydroxymethylglutaryl-CoA-reductase	gnl\|CDD\|153082	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR). Hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR), class II, prokaryotic enzyme is a homodimer. Class II enzymes are found primarily in prokaryotes and Archaeoglobus fulgidus and are soluble as they lack the membrane region. Enzymes catalyze the synthesis of coenzyme A and mevalonate in isoprenoid synthesis. Bacteria, such as Pseudomonas mevalonii, which rely solely on mevalonate for their carbon source, catalyze the reverse reaction, using an NAD-dependent HMGR to deacetylate mevalonate into 3-hydroxy-3-methylglutaryl-CoA. Human and bacterial HMGR differ in their active site architecture.	0
NZ_CP019120.1\|WP_035162685.1\|750251_750557_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	3.0201e-28
NZ_CP019120.1\|WP_076026663.1\|743532_744732_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.03529e-29
NZ_CP019120.1\|WP_003619905.1\|762135_762573_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	3.03729e-86
NZ_CP019120.1\|WP_076026349.1\|753096_754197_+\|thiolase-family-protein	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	2.06637e-160
NZ_CP019120.1\|WP_076026348.1\|750553_751222_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	7.11211e-69
NZ_CP019120.1\|WP_076026354.1\|762856_764143_+\|histidine--tRNA-ligase	gnl\|CDD\|273080	TIGR00442, hisS, histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff. [Protein synthesis, tRNA aminoacylation].	0
NZ_CP019120.1\|WP_076026352.1\|756757_758116_+\|threonine/serine-exporter-family-protein	gnl\|CDD\|377697	pfam06738, ThrE, Putative threonine/serine exporter. ThrE is a family of bacterial and Archaeal proteins that catalyze the export of L-threonine from the cell. UniProtKB:Q79VD1 has been characterized as being necessary for this export. The domain exhibits 10 putative TMs and catalyzes the proton-motive-force-dependent efflux of threonine and serine.	9.71748e-64
NZ_CP019120.1\|WP_003619897.1\|758173_758680_-\|aminoacyl-tRNA-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	1.02683e-65

>NZ_CP019120.1|WP_076026348.1|750553_751222_+|type-II-A-CRISPR-associated-protein-Csn2
MIITYKAHKSFEIENGKVNVIATSSPIAYCNLIEGMQEKNELLCAVSEDYDAIPLSKAVDWLGDPLISESLLQKYMTKLTSYVVDELSADGRNRIITFYRDLLNAVQDELLMEDLPLEISFDTDLKKLFKFGGLHFNKTLTRDPYGIIETVLRIHDRLDLKSTVVFSNVAHYLDVEQFNEISKLCLELKKSIIFIEFCSHKDQVVYGDAKFSYIDEDLVDWY
>NZ_CP019120.1|WP_035162685.1|750251_750557_+|CRISPR-associated-endonuclease-Cas2
MRLMIMFDLPVDTAVDRKQYRQFRKNLINEGFVMIQYSVYVRVCASKKAAELLEKRIRGYVPEYGVIQSLMLTEKQYNDMHFLLGEPVKDIRNTSDRTVIL
>NZ_CP019120.1|WP_060597960.1|749362_750274_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRNVIITQHSKLSYSSNMMVVHTKDGVSQIPVSDINMLVVLTTQAVITSALIAELAKKQTKVIFVDEKQEPICETENYYSTNCHPEKLIKQFNWDEDRKQILWTKIVAAKIQNQMNVLRIYGLPTDEIEKDFLELELNDASNREATTARKYFTELFGKDFKRREGSNALNAALNYGYSILLSAVNRKITMDGNRTYMGVHHSSKHNPFNLGSDLMEPFRPFVDYWLYDHKNIKEFTPDIKYGLVELLSLRIIYNGDRMILGNAINQYVHDCLRYLDGNLFEMDIELGVDYEVPNDAIDDNV
>NZ_CP019120.1|WP_076026663.1|743532_744732_+|HAMP-domain-containing-histidine-kinase
MFFSFSSLIGISLFESSHEADQVLSIIVKNNGRLDEVQAKKRLGDQYNKEGMFKYRYFTANINTKKQTLTVIDADHIIGYSINSVSSRKKQISRRLSAGQLKGTIHSNGVRFRYLAKKISANKYYICFIDLSPLMQSALLLVRYALIFTFGGILVFVIIMTLLADKAIQPIKDAYYKQRRFITNAGHELKTPLAVISANAEMEELLGNDDEWSESTKEQVVRMTGLINQLITLTRMSEPEELVLSKVNFSEITKESADSFKSVLAKDNKKYVVSIDPDLYINAEQRSLLELVNILIDNAQKYCDLEGEVTVVLAKSRLNQNAVLTVTNSYKNGAGIDTNRFFERFYREDESHHYDQKQKNGFGIGLSMAQDLVVAFGGKINASWSDGVMNFTVTFKRVH
>NZ_CP019120.1|WP_011543827.1|742800_743469_+|response-regulator-transcription-factor
MKILLAEDEAQLNRVLTVAMQKSGYDVDSVFNGQEAVDAVKKHPYDVIIMDIMMPVKNGLDAVKEIRSTGDKTYIMMLTAKSEIDDKVTGLDVGADDYLTKPFSLKELLVRLRSKERRSEDYNSTQELNYDNLKLDLNSQELSSNNSISLSKQETGLMRYFLLNPGKAISTEELFNHVWKNEDESEDVVWVYISFLRSKLASIGANVQISGEKGGEFCLERA
>NZ_CP019120.1|WP_076026347.1|742189_742804_+|GTP-pyrophosphokinase
MSIYGKYADYLPQILDSVLQQIQGIGQEYSAEHGQKLYKHLEGRVKGEESMTQKCERKGLPLMPESALIENRDAIGLRIVCNFIDDIYTCIDLLKKQDNFKIINEKDYITDTKPNGYRSYHLIMEVVTPFEDVHGNKPGIYYVEIQLRTIAMDTWASLEHEMKYKHDIKNPERISKELKRVADELASCDVSMQTIRQLIKEGEL
>NZ_CP019120.1|WP_076026346.1|741542_741989_+|FMN-binding-protein
MYKKGDYEVEAEGHHSTVKLRVSFDEEKLTKIEVLEENETQAFVDDLKDRFIPEVVANQSLNVDAISGATKLAKAVTSSVEEAITEAGGNPKTFIEAAHVAKDDQVIPGMYVVGTDYSPYYDIPGFCYGSCIGSGVIAGHGASAYAKA
>NZ_CP019120.1|WP_076026345.1|740356_740560_+|hypothetical-protein
MGESKEDKRMREKWESLSGAEKSEFKKNYAMRRGITIDFIRRWAWNEGDLDNLEYHIAERRKKFREF
>NZ_CP019120.1|WP_076026344.1|738560_738797_+|hypothetical-protein
MTDLAQLGGDELKEILDEKRRSRWLYQPLRAADPGASQAGRQEEVRRDKFFRLGDCDMKKMWAGKTSGKTDQIADDFN
>NZ_CP019120.1|WP_003619861.1|738142_738544_+|hypothetical-protein
MTDTQSMIAVQEKDNTVSSLILDHDGDLETAGRILEENYQDYEQVLALVNLGDLKRLGKTVEESRAYYRDEHEDQLVLENYADTEVFDRATEEQGDYLACCFLYCKYEGDFQWLVRDFSTGDKRFKPLKEALA
>NZ_CP019120.1|WP_076026349.1|753096_754197_+|thiolase-family-protein
MQDIYIVAAKRTPFGRYHKQLADFSAIDLGQIALRGALKEAGLDAEALDALFMGNVLSAGLGQNMARQIALNAGMREDSVAVSINEVCGSSLKAARLAEAQMLIGDLGLVAVGGSESMTNASKEIMFSDGLVDSFSGKSMGITAENVAKRNHISRQDADAFSLSSHQKAVKAQAEGLFADEIIQIEDLKQDENVRPDTSLEALAGLKTSFLEDGTVTAGNASPISDGASMIILATAEKVAEYQLTPLAKLGAYAEVGYDPEFMGYGPYYAIRKLLNETGRQVADYDFFEINEAFAATTLAVARDLEIPLAKVNKQGGAIALGHPLGASGTRLLATAARQLQRGGQRAIASLCIGGGLAIAFEIEKA
>NZ_CP019120.1|WP_076026350.1|754199_755426_+|hydroxymethylglutaryl-CoA-reductase
MKFYQLPPEERRQFLQEDGVALEDIPAADLARLDEMSENVVGEVKFPLSCLTSALVNGKNWRIPMTTEEASVVAAANHGMSVFAKAGGVKATSQRDGIYGQIVLEVTEAFSLAGFKKEFPAYIKEANKEFASLIRHGGGLKDLTARQEADLVYLLALVDPAEAMGANKTNAILEFLAQKMLAFPGVEAKLFAILSNYPSQLTTAKVAIPVSLLSKKGDLAEGREVAKKMALLAKIGSSDPYRAVTNNKGIMNGVDAVMLATGNDYRAVEAACHAYAAKSGEYLSLSSWKIAGEKLLGQVTLPLALGVVGGSISSRPDIRQSYAILGKIKAAELAELTASVALANNFAALSAISTKGIQAGHMRLQSRNVVQTLPASAEEKAAVYQMMISQGKYGETAAKNFLKELRGQ
>NZ_CP019120.1|WP_076026351.1|755429_756593_+|hydroxymethylglutaryl-CoA-synthase
MDIGIDQIGFYTPNKFVDMVDLANARNQDPNKFLIGIGQDRMAVADKTQDAVSMGINATAEYLDQVDLEQLGLLIFATESGIDQSKSASLFVKEALNLPARIRTFEIKEACFALTASLQVARDYVRAHPHHSAMIIGSDIARYGLATAGEVTQGAGAISMLIKENPAIIALEDGHTSHSENINDFWRPNNLATAVVDGHYSRDVYLDFFKSTFKPFLAEKQLQVSDFAGICYHLPYTKMGYKAHKIAIEGQDDETVKRLSDNFQLSAKYSRQVGNIYTASLYMSVLSLLENGDLEAGDRIGFFSYGSGAMAEFFSGKVVAGYQKRLRPALHARMFKERIRLGVGQYEDIFTEGLEALPENVEFTSDANHGTWYLAGQEGYVRQYKQK
>NZ_CP019120.1|WP_076026352.1|756757_758116_+|threonine/serine-exporter-family-protein
MKTKSTEQEYQHHLSHHHHMQVQWEEFFQSDDETKIKEATLIEKGSIISRVGMMILSCGTGAWRVRDAMDTLARTLDLTCSTDIGLISIVCTYFDVDNQSYSQSLALPTTGINMAKLNELEKFVRQFEAAGGDFEIKTVRRRLGEIEHMKGRYPLWGSSLAAALACSGFIFLLGGGLPEIICSFIGAGLGQFARGSLAKRRITVAATTAVGVAAACLSYYLAFMLGHLLFNVDMIHMRGYIGAMLFVIPGFPFITSGLDIAKLDMRSGLERMAYAILIILIATGTGWVMATALQIKPGDLPALHLSKAILTACRLLASFCGVFGFSLMFNSHRRMAAAAGLVGAIANTMRLSLVDFAHFPAPLAAFLAALLAGLLAGYVREKVGYPRIALTVPSIVIMVPGLYMYRGIFFLALTNVGAGATWMTEALMLVMSLPAGLLTARILNDKKWRRVD
>NZ_CP019120.1|WP_003619897.1|758173_758680_-|aminoacyl-tRNA-deacylase
MSKKKKNKDKLDKTLVEKILDQHKIAYEQHISEISEDHGVAQVGTGKPVLDGHPVYKTLAVNGNKTGPIVGVVPLSGHLDLKKIAKASGNKKCEMIPLKQLEKTTGYVHGANTPIGIYHSKKFPIFLDESVLKEDGIWVSSGEVGRSVMVNPLDLQKLVKATVADLQE
>NZ_CP019120.1|WP_003619900.1|758760_759705_+|50S-ribosomal-protein-L11-methyltransferase
MKLLEIKIESSYDVEDALAYFATEDLKALGTEARRRSDFEQAGWLHDSTVVDMDDIPNLPDELEFIAYFDEETDPEEMVKRFKDKLAELAGYGLKTAPGEISVDYVADQDWNTVWKKYYHVINLSRHLAIVPEWEDYQPAFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIHDIALQKTSLLADVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAGRWIGLAISRKHD
>NZ_CP019120.1|WP_076026353.1|759845_762107_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MSKYTEMTHEQVMAACKKYITADQLAFVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHDTVEDTSVTNDDIKEKFGADVAFIVDGVTKLNKYEYKSHKEFLAENHRKMLIAMAKDLRVILVKLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNPEAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDISGRPKHIYSIYKKMVNKHKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPGGKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQGVDEKEGGALDIGREILELQKDSSDADEFMEAVHSDIFADKVYVFTPKGEVYELPKGSVTLDFAYAIHTQVGDHAIGAKVNDKLVPLDYKLKNGDVVDILTQSNARPSRDWAEMVKTSRAKNKIRRYFRDVDREESLARGKSELVDLLKENGLSAKDFLDKSHIDEVLDHFSFKTDEDMYAAIGFGNMSAVSIYNRLTADLRRQQEEEKQKQFEAQIMSAGQQAAASSVVKKAAPQKDDAKSKTKGKKPDSLVRVQGLEDLDMHFAKCCNPVPGDLIIGYVTKGRGVTVHRADCRNVVSADPVAQGRMIDVEWNNIDEGKQASFNANFELFGYNRQKLLGDVINRLNALTKNITNVSASVNEENIAHFYITVEVRNAAQLNDIMAKLRDIPDVYDTKRTDN
>NZ_CP019120.1|WP_003619905.1|762135_762573_+|D-tyrosyl-tRNA(Tyr)-deacylase
MRVVIQRVNHAAVRIDGETVGQIQKGLLLLVGLAEGDGEEQVVKAADKIAKMRIFEDEAGKTNLGIKDVGGQILSVSQFTLLADTKRGNRPSFVHAMRPPKSSQLWEEFNQELVKRGLTVETGEFGADMKVELENDGPFTIVLDL
>NZ_CP019120.1|WP_076026354.1|762856_764143_+|histidine--tRNA-ligase
MRVQRPKGTVDILPETSGQWEKVEQTARDLFKRANYHEIRTPSFENYELFSRSSGETSDVVEKEMYDFEDKGGRHIALRPEGTAGVVRAYVENKIYGPDYVKPFNVYYIAAMYRYERPQAGRQREFHQIGVESFGSNGYLADVETILLGHDLLAELGVKNYELHINTLGDSEVRQAYHDALVDYFTPVKDQLSEDSQRRLGKNPLRILDSKAEEDQQFLSEAPKIRDYLDEESKENFNKILASLDKLGVKYVIDDDLVRGLDYYTGVIFEFMVDDPTLWASPSTVLGGGRYNHLVEEFSGPETPAVGFGIGEERLMLVLSKQNPEMFEDQGIDFFITNIGEGTDIKAVEVARQLRSLGFSAQYDVDQKKLKAQFRKADRVGARYVVTLGAKELAEGKLTVKRLSDGQQFSLEFTDLEDKASLLSKIEK
>NZ_CP019120.1|WP_003619909.1|764158_766003_+|aspartate--tRNA-ligase
MMQMEKRTDYCGNITSQYLDQDVLLYGWVQRVRNLGQLIFIDLRDREGIVQVVVNHDSGQELMDVASSLGQEYVVEVKGHVNERSSKNPDMKTGDVEVIASEITVLNKAKTPPFEIKDDLVASEQTRLKYRYLDLRRPTLQNALIMRAQIMTATNAYLSGEGFINIETPDLGKSTPEGARDYLVPSRVYPGSFYALPQSPQIFKQLLMGAGFDKYYQIARCFRDEDLRGDRQPEFTQIDLETSFMDEEGVQEVTEGLLAKVMKDVKGIDLQLPLPRITWQESMDKYGCDKPDTRYEMLIHDLGNVFAKSGFKVFASALENGGFVRGIAVKGGAKFYSRKKIEAMQDYIKRYHAKGLAWVKYEDGDFSGPVSRFLSEEEKAGLVQEFSLEGGELLLFIADQWKVCCDSLDYLRRQTAKETGIIPKDTYKYLWVVDWPLFEYDEGDERWIAAHHPFTMPDDKGIELLETDPHKAHARSYDIVLNGYELGGGSIRIHKRDIQEKMFKALGFTKERAYEQFGFLMDALDMGFPPHAGLAIGLDRFAMLLAGKDNIRDVIAFPKNASASEPMMHAPAPVADQQLTDLGIEVAEAAKEGVEKYEASLEAEAAEDVKSHEE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP021139	Sulfuriferula sp. AH1 plasmid unnamed, complete sequence	29014-29043	5	0.833
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1404785-1404814	6	0.8
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_AP014706	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence	243830-243859	6	0.8
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	1460158-1460187	6	0.8
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1382747-1382776	6	0.8
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	1276370-1276399	6	0.8
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	700884-700913	6	0.8
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	455544-455573	6	0.8
NZ_CP019120_2	2.16\|752280\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752280-752309	30	MN693546	Marine virus AFVG_25M34, complete genome	36920-36949	6	0.8
NZ_CP019120_2	2.21\|752610\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752610-752639	30	NC_031055	Bacillus phage PfEFR-5, complete genome	6428-6457	6	0.8
NZ_CP019120_2	2.21\|752610\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752610-752639	30	KT725776	Bacillus phage vB_BceS-MY192, partial genome	21545-21574	6	0.8
NZ_CP019120_2	2.21\|752610\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752610-752639	30	NC_048641	Bacillus phage PfEFR-4, complete genome	6482-6511	6	0.8
NZ_CP019120_2	2.1\|751290\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751290-751319	30	NZ_CP013426	Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence	43902-43931	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	554673-554702	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	436554-436583	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	582763-582792	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NC_021911	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence	661663-661692	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	69413-69442	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	554673-554702	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	94599-94628	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	167018-167047	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	186356-186385	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	571457-571486	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	327448-327477	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	474605-474634	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	1094410-1094439	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP025436	Gordonia sp. YC-JH1 plasmid pGOR1, complete sequence	23056-23085	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP026518	Deinococcus sp. NW-56 plasmid unnamed2, complete sequence	208038-208067	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	204225-204254	7	0.767
NZ_CP019120_2	2.5\|751554\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751554-751583	30	NZ_CP045549	Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence	50640-50669	7	0.767
NZ_CP019120_2	2.10\|751884\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751884-751913	30	NZ_CP040501	Lactobacillus paragasseri JV-V03 plasmid unnamed1, complete sequence	29716-29745	7	0.767
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	MN961670	Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence	250507-250536	7	0.767
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	326970-326999	7	0.767
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	16970-16999	7	0.767
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	405264-405293	7	0.767
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1551369-1551398	7	0.767
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1116111-1116140	7	0.767
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	8157-8186	7	0.767
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1838864-1838893	7	0.767
NZ_CP019120_2	2.14\|752148\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752148-752177	30	NZ_CP013369	Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence	18778-18807	7	0.767
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	MN693545	Marine virus AFVG_25M554, complete genome	3916-3945	7	0.767
NZ_CP019120_2	2.16\|752280\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752280-752309	30	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	80671-80700	7	0.767
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP022992	Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence	486569-486598	8	0.733
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_LR134452	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence	298247-298276	8	0.733
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	372946-372975	8	0.733
NZ_CP019120_2	2.4\|751488\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751488-751517	30	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1798252-1798281	8	0.733
NZ_CP019120_2	2.10\|751884\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751884-751913	30	MG945690	UNVERIFIED: Microviridae sp. isolate 1419-1711, complete genome	1030-1059	8	0.733
NZ_CP019120_2	2.10\|751884\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751884-751913	30	NC_013505	Lactobacillus johnsonii FI9785 plasmid p9785L, complete sequence	20923-20952	8	0.733
NZ_CP019120_2	2.11\|751950\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751950-751979	30	NZ_CP014799	Salipiger profundus strain JLT2016 plasmid pTPRO3, complete sequence	12204-12233	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	3345-3374	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP031958	Phaeobacter sp. LSS9 plasmid unnamed2, complete sequence	50001-50030	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	416480-416509	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP010685	Phaeobacter piscinae strain P14 plasmid pP14_d, complete sequence	31662-31691	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP010720	Phaeobacter piscinae strain P18 plasmid pP18_e, complete sequence	31703-31732	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP010660	Phaeobacter piscinae strain P71 plasmid pP71_d, complete sequence	31592-31621	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP010773	Phaeobacter piscinae strain P13 plasmid pP13_f, complete sequence	31676-31705	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	NZ_CP010648	Phaeobacter piscinae strain P36 plasmid pP36_e, complete sequence	31680-31709	8	0.733
NZ_CP019120_2	2.12\|752016\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	752016-752045	30	MT586120	Synechococcus phage S-CAM7 isolate 0809CC03, complete genome	46387-46416	8	0.733
NZ_CP019120_2	2.1\|751290\|30\|NZ_CP019120\|PILER-CR,CRISPRCasFinder,CRT	751290-751319	30	CP011075	Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence	85131-85160	9	0.7
NZ_CP019120_2	2.6\|751620\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751620-751649	30	MN694510	Marine virus AFVG_250M493, complete genome	4414-4443	9	0.7
NZ_CP019120_2	2.7\|751686\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751686-751715	30	MN694510	Marine virus AFVG_250M493, complete genome	4414-4443	9	0.7
NZ_CP019120_2	2.8\|751752\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751752-751781	30	MN270258	Streptococcus phage phi-SgaBSJ27_rum, complete genome	58389-58418	9	0.7
NZ_CP019120_2	2.8\|751752\|30\|NZ_CP019120\|CRISPRCasFinder,CRT	751752-751781	30	MN270259	Streptococcus phage phi-SgaBSJ31_rum, complete genome	58425-58454	9	0.7
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	NC_011973	Bacillus cereus Q1 plasmid pBc239, complete sequence	121777-121806	9	0.7
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	NZ_CP014284	Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence	129407-129436	9	0.7
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	NZ_CP010578	Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence	171120-171149	9	0.7
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	NZ_CP015177	Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence	153655-153684	9	0.7
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	NZ_CP032609	Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence	221308-221337	9	0.7
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	NZ_AP014867	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK3, complete sequence	14811-14840	9	0.7
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	NZ_CP014853	Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence	280997-281026	9	0.7
NZ_CP019120_2	2.15\|752214\|30\|NZ_CP019120\|CRISPRCasFinder,CRT,PILER-CR	752214-752243	30	NC_018492	Bacillus cereus FRI-35 plasmid p01, complete sequence	172784-172813	9	0.7

1. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP021139 (Sulfuriferula sp. AH1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

--agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
gcgccaag--ggcaatgacaagatgctgaaca	Protospacer
  . ****  ************ *********

2. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.8

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gggccgaacagggcgacgaaggcgagcaga	Protospacer
*** *   *********** *********

3. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014706 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_2p, complete sequence) position: , mismatch: 6, identity: 0.8

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gcgccgaccagggcggcgatggcgatcagc	Protospacer
* * *  ********.********* ****

4. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 6, identity: 0.8

----gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gcctggg----ccatggcgacgaaggcgagcagc	Protospacer
    ***    *** ******** **********

5. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 6, identity: 0.8

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gggccgaacagggcgacgaaggcgagcaga	Protospacer
*** *   *********** *********

6. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 6, identity: 0.8

----gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gcctggg----ccatggcgacgaaggcgagcagc	Protospacer
    ***    *** ******** **********

7. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 6, identity: 0.8

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gggccgaacagggcgacgaaggcgagcaga	Protospacer
*** *   *********** *********

8. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 6, identity: 0.8

agcaaggcggcaatgacaagctgc-tgaaca	CRISPR spacer
ggcaaggcggcaatggcgagctgcatgcgc-	Protospacer
.**************.*.****** ** .*

9. spacer 2.16|752280|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to MN693546 (Marine virus AFVG_25M34, complete genome) position: , mismatch: 6, identity: 0.8

tgtaacaagattagaaaaatacttgagcca	CRISPR spacer
tgtaactagattagaaaattacttagaccc	Protospacer
****** *********** *****...**

10. spacer 2.21|752610|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NC_031055 (Bacillus phage PfEFR-5, complete genome) position: , mismatch: 6, identity: 0.8

actctgctttcgctgtaactagctttttcg	CRISPR spacer
attctgctttcgctgcaactaccttttgtt	Protospacer
*.*************.***** ***** .

11. spacer 2.21|752610|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to KT725776 (Bacillus phage vB_BceS-MY192, partial genome) position: , mismatch: 6, identity: 0.8

actctgctttcgctgtaactagctttttcg	CRISPR spacer
attctgctttcgctgcaactaccttttgtt	Protospacer
*.*************.***** ***** .

12. spacer 2.21|752610|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NC_048641 (Bacillus phage PfEFR-4, complete genome) position: , mismatch: 6, identity: 0.8

actctgctttcgctgtaactagctttttcg	CRISPR spacer
attctgctttcgctgcaactaccttttgtt	Protospacer
*.*************.***** ***** .

13. spacer 2.1|751290|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013426 (Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence) position: , mismatch: 7, identity: 0.767

gcaacaaccagacgggtctttcgtacctac	CRISPR spacer
acaacagccagacgggtcttgcgtgcgccc	Protospacer
.*****.************* ***.* . *

14. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
cggacttcctgggcgacgacggcgaagccc	Protospacer
 ******** *********.*****.   *

15. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
cggacttcctgggcgacgacggcgaagccc	Protospacer
 ******** *********.*****.   *

16. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
cggacttcctgggcgacgacggcgaagccc	Protospacer
 ******** *********.*****.   *

17. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
cggacttcctgggcgacgacggcgaagccc	Protospacer
 ******** *********.*****.   *

18. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gggacttccagggcgaaggtggcgtaccag	Protospacer
**************** *.***** .* .

19. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
cggacttcctgggcgacgacggcgaagccc	Protospacer
 ******** *********.*****.   *

20. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gggacttccagggcgaaggtggcgtaccag	Protospacer
**************** *.***** .* .

21. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gccgcatcgagggcgacgatggcgagcggt	Protospacer
*  .* ** ******************.*.

22. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
ccggcatcccgggcggcgatggcgagcagt	Protospacer
  *.* *** *****.*************.

23. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gcgacttccaggacggcgatggcgaaaacg	Protospacer
* **********.**.*********. *

24. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gcgacttccaggacggcgatggcgaaaacg	Protospacer
* **********.**.*********. *

25. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
accacggccagggcgacgagggcgatcagc	Protospacer
.  **  ************ ***** ****

26. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gcgacttccaggacggcgatggcgaaaacg	Protospacer
* **********.**.*********. *

27. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025436 (Gordonia sp. YC-JH1 plasmid pGOR1, complete sequence) position: , mismatch: 7, identity: 0.767

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
ccggctagaagcgcgacgatggcgagcagc	Protospacer
  *.**   ** ******************

28. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026518 (Deinococcus sp. NW-56 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

----gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gtctggaa----cagggcggcgatggcgagcagg	Protospacer
    **.*    *******.*************

29. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 7, identity: 0.767

gggactt---ccagggcgacgatggcgagcagc	CRISPR spacer
---ccctgcgccatggcgacgaaggcgagcagc	Protospacer
    *.*   *** ******** **********

30. spacer 2.5|751554|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP045549 (Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

cagagcgttaccgcgttgctcagcatatcg	CRISPR spacer
gagagcgttaccgcattgctaagcgaaccc	Protospacer
 *************.***** ***. *.*

31. spacer 2.10|751884|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP040501 (Lactobacillus paragasseri JV-V03 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

cgacaaataagtctcgtaaaaagaaaacga	CRISPR spacer
ctagaaacaagtttcgtaaaaagaaaaaag	Protospacer
* * ***.****.************** ..

32. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 7, identity: 0.767

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
ccaaaggcggcaatcacaagctgcttaagg	Protospacer
   *********** ********** ** .

33. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.767

agcaaggcggcaatgacaagctgctgaaca---	CRISPR spacer
ctcaaggcggcaatgaca---cgctgaacggtg	Protospacer
  ****************   .*******.

34. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
tccacatcggcaaggacaagctgctgacca	Protospacer
  ** . ****** ************* **

35. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

agcaaggcggcaatgacaagctgctgaaca-	CRISPR spacer
ggcaaggcggcaatgacgagcagc-aatcgc	Protospacer
.****************.*** ** .* *.

36. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.767

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
tccacatcggcaaggacaagctgctgacca	Protospacer
  ** . ****** ************* **

37. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.767

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
tccacatcggcaaggacaagctgctgacca	Protospacer
  ** . ****** ************* **

38. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
ttcacatcggcaaggacaagctgctgacca	Protospacer
  ** . ****** ************* **

39. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
ttcacatcggcaaggacaagctgctgacca	Protospacer
  ** . ****** ************* **

40. spacer 2.14|752148|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 7, identity: 0.767

aaagaaagggtcggactggaagcggtcagt	CRISPR spacer
acccacggggtcgtactggaagcgctcagt	Protospacer
*   * .****** ********** *****

41. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to MN693545 (Marine virus AFVG_25M554, complete genome) position: , mismatch: 7, identity: 0.767

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
tggatttctaaattgattcaaagagaatca	Protospacer
* ******.***************.* ...

42. spacer 2.16|752280|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.767

tgtaacaagattagaaaaatacttgagcca	CRISPR spacer
agaaacaaaattagaaaattacttgacaga	Protospacer
 * *****.********* *******   *

43. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022992 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence) position: , mismatch: 8, identity: 0.733

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
aaatgatccagtgcgacgacggcgagcagc	Protospacer
...   ***** *******.**********

44. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 8, identity: 0.733

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
ccgacttccagggcgacgagcgcgacgtga	Protospacer
  *****************  ****   *

45. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.733

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gcctgcgccatggcgacgaaggcgagcagc	Protospacer
*    . *** ******** **********

46. spacer 2.4|751488|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.733

gggacttccagggcgacgatggcgagcagc	CRISPR spacer
gcctgcgccatggcgacgaaggcgagcagc	Protospacer
*    . *** ******** **********

47. spacer 2.10|751884|30|NZ_CP019120|CRISPRCasFinder,CRT matches to MG945690 (UNVERIFIED: Microviridae sp. isolate 1419-1711, complete genome) position: , mismatch: 8, identity: 0.733

cgacaaataagtctcgtaaaaagaaaacga	CRISPR spacer
acgcgaattagtctcgtaaaaagaaaaaag	Protospacer
  .*.*** ****************** ..

48. spacer 2.10|751884|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NC_013505 (Lactobacillus johnsonii FI9785 plasmid p9785L, complete sequence) position: , mismatch: 8, identity: 0.733

cgacaaataagtctcgtaaaaagaaaacga	CRISPR spacer
ttagaaacaagtttcgtaaaaagaaaaaag	Protospacer
. * ***.****.************** ..

49. spacer 2.11|751950|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP014799 (Salipiger profundus strain JLT2016 plasmid pTPRO3, complete sequence) position: , mismatch: 8, identity: 0.733

ccatccagtctggatccttgaccaagacgt	CRISPR spacer
cgctatcgtctggatcgttgaccaagacaa	Protospacer
*  * . ********* ***********.

50. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
tcgaaggcggcaaggtcaagctgctgcccg	Protospacer
   ********** * **********  *.

51. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP031958 (Phaeobacter sp. LSS9 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
gtctgggcggcaatgacacgctgctgggcg	Protospacer
. * .************* *******..*.

52. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
tcaacagcgggaaagacaagctgctgaacg	Protospacer
   * .**** ** ***************.

53. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP010685 (Phaeobacter piscinae strain P14 plasmid pP14_d, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
gtctgggcggcaatgacacgctgctgggcg	Protospacer
. * .************* *******..*.

54. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP010720 (Phaeobacter piscinae strain P18 plasmid pP18_e, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
gtctgggcggcaatgacacgctgctgggcg	Protospacer
. * .************* *******..*.

55. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP010660 (Phaeobacter piscinae strain P71 plasmid pP71_d, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
gtctgggcggcaatgacacgctgctgggcg	Protospacer
. * .************* *******..*.

56. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP010773 (Phaeobacter piscinae strain P13 plasmid pP13_f, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
gtctgggcggcaatgacacgctgctgggcg	Protospacer
. * .************* *******..*.

57. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to NZ_CP010648 (Phaeobacter piscinae strain P36 plasmid pP36_e, complete sequence) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
gtctgggcggcaatgacacgctgctgggcg	Protospacer
. * .************* *******..*.

58. spacer 2.12|752016|30|NZ_CP019120|CRISPRCasFinder,CRT matches to MT586120 (Synechococcus phage S-CAM7 isolate 0809CC03, complete genome) position: , mismatch: 8, identity: 0.733

agcaaggcggcaatgacaagctgctgaaca	CRISPR spacer
gtgatagcggcaatgataagcagctgaacc	Protospacer
.  * .**********.**** *******

59. spacer 2.1|751290|30|NZ_CP019120|PILER-CR,CRISPRCasFinder,CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gcaacaaccagacgggtctttcgtacctac	CRISPR spacer
ccaaaaaccaaacgggtctttcgtgttgtt	Protospacer
 *** *****.*************...  .

60. spacer 2.6|751620|30|NZ_CP019120|CRISPRCasFinder,CRT matches to MN694510 (Marine virus AFVG_250M493, complete genome) position: , mismatch: 9, identity: 0.7

cagctgaagcttataaagaagcaacggcaa	CRISPR spacer
ttcctgaagcttataaagaagaaaaatctt	Protospacer
.  ****************** ** . *

61. spacer 2.7|751686|30|NZ_CP019120|CRISPRCasFinder,CRT matches to MN694510 (Marine virus AFVG_250M493, complete genome) position: , mismatch: 9, identity: 0.7

cagctgaagcttataaagaagcaacggcaa	CRISPR spacer
ttcctgaagcttataaagaagaaaaatctt	Protospacer
.  ****************** ** . *

62. spacer 2.8|751752|30|NZ_CP019120|CRISPRCasFinder,CRT matches to MN270258 (Streptococcus phage phi-SgaBSJ27_rum, complete genome) position: , mismatch: 9, identity: 0.7

accagcaagaccaggaagcaagaccaggaa	CRISPR spacer
ctaagcaagagcaggaagcaagacgtaaga	Protospacer
 . ******* *************  ...*

63. spacer 2.8|751752|30|NZ_CP019120|CRISPRCasFinder,CRT matches to MN270259 (Streptococcus phage phi-SgaBSJ31_rum, complete genome) position: , mismatch: 9, identity: 0.7

accagcaagaccaggaagcaagaccaggaa	CRISPR spacer
ctaagcaagagcaggaagcaagacgtaaga	Protospacer
 . ******* *************  ...*

64. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NC_011973 (Bacillus cereus Q1 plasmid pBc239, complete sequence) position: , mismatch: 9, identity: 0.7

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
ccacttttcatattgattcaaagaaataat	Protospacer
... ***.** ****************

65. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014284 (Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence) position: , mismatch: 9, identity: 0.7

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
ccacttttcatattgattcaaagaaataat	Protospacer
... ***.** ****************

66. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010578 (Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1 plasmid pBMB232, complete sequence) position: , mismatch: 9, identity: 0.7

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
ccacttttcatattgattcaaagaaataat	Protospacer
... ***.** ****************

67. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015177 (Bacillus thuringiensis serovar alesti strain BGSC 4C1 plasmid pBMB267, complete sequence) position: , mismatch: 9, identity: 0.7

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
ccacttttcatattgattcaaagaaataat	Protospacer
... ***.** ****************

68. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032609 (Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence) position: , mismatch: 9, identity: 0.7

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
ccacttttcatattgattcaaagaaataat	Protospacer
... ***.** ****************

69. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014867 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK3, complete sequence) position: , mismatch: 9, identity: 0.7

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
ccacttttcatattgattcaaagaaataat	Protospacer
... ***.** ****************

70. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014853 (Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence) position: , mismatch: 9, identity: 0.7

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
ccacttttcatattgattcaaagaaataat	Protospacer
... ***.** ****************

71. spacer 2.15|752214|30|NZ_CP019120|CRISPRCasFinder,CRT,PILER-CR matches to NC_018492 (Bacillus cereus FRI-35 plasmid p01, complete sequence) position: , mismatch: 9, identity: 0.7

ttgatttccaaattgattcaaagaaatctg	CRISPR spacer
ccacttttcatattgattcaaagaaataat	Protospacer
... ***.** ****************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

229463 : 246842

Planktothrix_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003619471.1\|229463_230507_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-19	32.2
WP_003619469.1\|230521_231475_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.6e-21	33.3
WP_076026225.1\|231556_231658_+	DUF975 family protein	NA	NA	NA	NA
WP_003622302.1\|231828_233142_-	aminopeptidase	R4TV59	Phaeocystis_globosa_virus	3.3e-62	32.7
WP_076026226.1\|233193_234507_-	aminopeptidase	R4TV59	Phaeocystis_globosa_virus	1.2e-62	33.5
WP_003619462.1\|234603_235029_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_011677979.1\|235256_235718_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_003619458.1\|235801_237091_-	adenylosuccinate synthase	L7Y4J5	Megavirus	3.2e-73	38.4
WP_003622309.1\|237276_238269_+	GMP reductase	Q4ZCY7	Staphylococcus_virus	1.8e-132	68.4
WP_076026227.1\|238397_239705_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	3.0e-87	40.6
WP_003619451.1\|239697_240057_+	hypothetical protein	E3W8I0	Leuconostoc_phage	7.8e-06	34.8
WP_076026228.1\|240126_241419_-	purine permease	Q9KX94	Enterobacteria_phage	8.2e-29	30.7
WP_003619447.1\|241448_242018_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_003619444.1\|242372_243530_+	guanosine monophosphate reductase	A0A1V0SHK8	Klosneuvirus	4.1e-56	31.3
WP_076026229.1\|243529_245083_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	3.5e-18	30.2
WP_011543598.1\|245231_246842_+	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	2.4e-17	27.2

DBSCAN-SWA_2

259927 : 330895

Bacillus_virus(14.29%)

tRNA,bacteriocin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076026235.1\|259927_260962_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.1e-49	33.8
WP_003620710.1\|261123_261678_-	cysteine hydrolase	G3MA16	Bacillus_virus	8.1e-34	39.7
WP_003620712.1\|261931_262861_+	hypothetical protein	NA	NA	NA	NA
WP_003620715.1\|262853_263120_-	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_011543609.1\|263215_263992_-	NUDIX hydrolase	G3MA14	Bacillus_virus	3.3e-09	26.0
WP_003620720.1\|265727_266015_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_035175648.1\|266492_267113_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_003622413.1\|267114_267915_-	ABC transporter permease	NA	NA	NA	NA
WP_011543614.1\|268735_268981_+	arginine deiminase	NA	NA	NA	NA
WP_011543615.1\|269002_269287_+	hypothetical protein	NA	NA	NA	NA
WP_076026238.1\|270929_271598_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_002878734.1\|271917_272943_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_011543617.1\|272944_273427_+	hypothetical protein	A7KUY9	Bacillus_phage	5.4e-34	55.5
WP_011678006.1\|273407_274022_+	hypothetical protein	NA	NA	NA	NA
WP_076026239.1\|274380_277071_+	magnesium-translocating P-type ATPase	M1HJQ2	Paramecium_bursaria_Chlorella_virus	1.5e-40	25.3
WP_003620738.1\|277206_279189_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	2.9e-94	37.0
WP_076026240.1\|279188_279968_+	TatD family hydrolase	NA	NA	NA	NA
WP_076026241.1\|279951_280524_+	ribonuclease M5	NA	NA	NA	NA
WP_076026242.1\|280498_281389_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003620745.1\|281448_281700_+	hypothetical protein	NA	NA	NA	NA
WP_076026243.1\|281804_282635_+	pur operon repressor	NA	NA	NA	NA
WP_076026244.1\|282696_284082_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L140	Tupanvirus	3.6e-30	34.0
WP_076026245.1\|284251_284992_+	hypothetical protein	NA	NA	NA	NA
WP_003620753.1\|285221_286202_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	2.1e-45	37.1
WP_011678010.1\|286273_287587_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.6e-32	35.6
WP_002878700.1\|287726_288125_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_060597840.1\|288170_288737_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_003622425.1\|288853_290473_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.5e-133	46.2
WP_003620764.1\|290592_291864_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003620766.1\|291963_292215_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_003620768.1\|292322_293690_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_003622430.1\|293699_295151_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.0e-64	37.2
WP_003620772.1\|295235_295649_+	holo-ACP synthase	NA	NA	NA	NA
WP_011543628.1\|295645_296776_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	2.6e-23	27.5
WP_003620777.1\|296829_297528_-	CBS domain-containing protein	NA	NA	NA	NA
WP_003612856.1\|297751_298309_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_076026246.1\|298325_301802_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_002878680.1\|301870_302113_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA
WP_014564607.1\|302178_302559_+	septation inhibitor protein	NA	NA	NA	NA
WP_003620781.1\|302558_302912_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_003622437.1\|302959_304255_+\|tRNA	tRNA lysidine(34) synthetase TilS	R4TVK3	Phaeocystis_globosa_virus	4.8e-13	28.5
WP_076026247.1\|304325_306539_+\|protease	ATP-dependent zinc metalloprotease FtsH	C7U047	Ostreococcus_tauri_virus	2.8e-109	40.9
WP_076026248.1\|306583_307465_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_003622444.1\|309554_310841_+	peptidase T	NA	NA	NA	NA
WP_003622447.1\|310954_311989_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_003620794.1\|312005_313511_+\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	1.7e-86	39.5
WP_003620796.1\|313632_314067_+	hypothetical protein	NA	NA	NA	NA
WP_076026249.1\|314084_314840_+	GGDEF domain-containing protein	G3MA91	Bacillus_virus	1.7e-05	32.4
WP_107645595.1\|314840_314975_+	diguanylate cyclase	NA	NA	NA	NA
WP_076026250.1\|315105_315324_+	hypothetical protein	NA	NA	NA	NA
WP_003620808.1\|316939_317566_-	DUF5052 family protein	A0A2K9VCV0	Lactobacillus_phage	6.3e-43	44.1
WP_011543637.1\|318171_318633_+	GAF domain-containing protein	NA	NA	NA	NA
WP_003620811.1\|318656_321116_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	3.3e-119	32.8
WP_003620813.1\|321140_321329_+	hypothetical protein	NA	NA	NA	NA
WP_119906292.1\|321328_321490_+	hypothetical protein	NA	NA	NA	NA
WP_076026655.1\|321700_325366_+	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	2.0e-51	25.2
WP_003620817.1\|325381_329047_+	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	4.6e-69	24.7
WP_003620818.1\|329114_329675_-	hypothetical protein	NA	NA	NA	NA
WP_076026251.1\|329860_330895_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	8.8e-50	33.8

DBSCAN-SWA_3

945618 : 1026489

Streptococcus_phage(22.22%)

tRNA,integrase,transposase,protease

attL 941628:941646|attR 1024533:1024551

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
941628:941646	attL	NA	NA	NA	NA
WP_041806500.1\|945618_946260_-\|integrase	tyrosine-type recombinase/integrase	A3F636	Streptococcus_phage	5.1e-24	34.9
WP_041813527.1\|946595_947036_-	hydrolase	NA	NA	NA	NA
WP_076026396.1\|947124_947361_-	hypothetical protein	NA	NA	NA	NA
WP_076026395.1\|948352_949639_+	MATE family efflux transporter	NA	NA	NA	NA
WP_076026393.1\|951594_954795_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_076026392.1\|954943_955222_+	ABC transporter permease	NA	NA	NA	NA
WP_076026405.1\|956280_958221_-	hypothetical protein	NA	NA	NA	NA
WP_076026406.1\|958224_962034_-	hypothetical protein	NA	NA	NA	NA
WP_003618110.1\|963374_963836_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_011678292.1\|963835_965563_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.6e-32	27.2
WP_076026407.1\|965562_967320_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.6e-41	24.7
WP_076026408.1\|967402_967711_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_076026409.1\|967755_968154_-	ribonuclease HI	M4QMN0	Micromonas_pusilla_virus	8.4e-09	32.4
WP_119906355.1\|968170_968476_-	hypothetical protein	F2Y0Z1	Organic_Lake_phycodnavirus	1.9e-05	34.7
WP_076026410.1\|970005_970488_-	hypothetical protein	NA	NA	NA	NA
WP_076026411.1\|970694_970961_-	N-acetyltransferase	NA	NA	NA	NA
WP_076026412.1\|970962_971682_-	HAD family hydrolase	M1H9H9	Acanthocystis_turfacea_Chlorella_virus	5.4e-06	24.1
WP_076026413.1\|972018_972216_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_076026333.1\|973503_974727_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.6e-96	48.2
WP_060598010.1\|974984_975770_-	DNA polymerase III subunit epsilon	A0A1X9I5C8	Streptococcus_phage	1.1e-17	31.3
WP_076026414.1\|975774_976293_-	MmcQ family protein	NA	NA	NA	NA
WP_076026415.1\|976299_977073_-	hypothetical protein	NA	NA	NA	NA
WP_076026416.1\|977065_977638_-	GNAT family N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	6.6e-31	40.5
WP_035169673.1\|977767_978502_-	hypothetical protein	A0A0E3ICJ0	Synechococcus_phage	9.4e-06	34.4
WP_076026417.1\|978501_982941_-	restriction endonuclease	A0A2H4UUH6	Bodo_saltans_virus	1.0e-22	24.7
WP_041813539.1\|983065_983293_-	hypothetical protein	NA	NA	NA	NA
WP_035165481.1\|983871_984063_-	hypothetical protein	NA	NA	NA	NA
WP_076026418.1\|984112_984961_-	LD-carboxypeptidase	NA	NA	NA	NA
WP_076026419.1\|985006_986431_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_003623050.1\|986423_987398_-	hypothetical protein	NA	NA	NA	NA
WP_076026420.1\|987397_988138_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014564968.1\|988594_988792_-	hypothetical protein	NA	NA	NA	NA
WP_011543930.1\|988940_989552_-	pyroglutamyl-peptidase I	NA	NA	NA	NA
WP_003620552.1\|989630_990383_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_076026421.1\|991536_992967_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_076026422.1\|993067_994588_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_011543933.1\|994591_995515_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-26	38.7
WP_076026423.1\|995845_996307_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_035169870.1\|996757_997177_+	3-beta hydroxysteroid dehydrogenase	NA	NA	NA	NA
WP_076026425.1\|997238_998150_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_076026426.1\|998869_1000042_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_076026427.1\|1000311_1006074_-	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	7.7e-10	30.3
WP_060598031.1\|1007734_1008349_+	DedA family protein	NA	NA	NA	NA
WP_011678323.1\|1008699_1009716_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	4.1e-60	39.1
WP_014564984.1\|1009792_1011091_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	8.2e-53	28.4
WP_081381927.1\|1011143_1012448_-\|transposase	ISL3-like element ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.4e-57	33.0
WP_003619632.1\|1013721_1016748_-	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	1.3e-141	32.9
WP_076026430.1\|1016751_1018635_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003618241.1\|1022749_1023061_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_076026431.1\|1023240_1024077_+\|integrase	integrase	NA	NA	NA	NA
WP_003618238.1\|1024119_1024686_+	signal peptidase I	NA	NA	NA	NA
1024533:1024551	attR	NA	NA	NA	NA
WP_011543946.1\|1024755_1024941_+	hypothetical protein	NA	NA	NA	NA
WP_076026432.1\|1025454_1026489_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.7e-51	34.1

DBSCAN-SWA_4

1077295 : 1090685

Erwinia_phage(12.5%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003623888.1\|1077295_1078690_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IB03	Erwinia_phage	8.5e-32	26.2
WP_003618695.1\|1078692_1079226_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_003618694.1\|1079335_1080223_-	tyrosine recombinase XerC	S5W9T9	Leptospira_phage	1.4e-24	30.2
WP_064081723.1\|1081673_1083857_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	2.7e-93	34.8
WP_002880198.1\|1083983_1084823_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	4.1e-29	37.6
WP_003618690.1\|1084920_1085691_-	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	5.6e-25	37.2
WP_003623895.1\|1085680_1086538_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_002880201.1\|1086612_1086843_-	YozE family protein	NA	NA	NA	NA
WP_011543974.1\|1086846_1087692_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	1.0e-19	45.0
WP_011678376.1\|1087826_1088489_+	hemolysin III family protein	NA	NA	NA	NA
WP_076026451.1\|1088514_1089705_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.4e-43	48.2
WP_076026452.1\|1089785_1090685_+	YitT family protein	M1Q1P6	Streptococcus_phage	1.2e-50	39.8

DBSCAN-SWA_5

1238275 : 1246847

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003618420.1\|1238275_1238857_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.1e-25	35.4
WP_035169900.1\|1238856_1239900_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.3e-64	41.3
WP_004560839.1\|1239902_1241381_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.9e-51	33.2
WP_004560840.1\|1241356_1243579_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.1e-142	40.1
WP_003618413.1\|1243578_1244253_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003615547.1\|1244252_1244501_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003615550.1\|1244505_1245228_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	1.3e-36	36.8
WP_011544054.1\|1245551_1246847_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.4e-20	32.6

DBSCAN-SWA_6

1688314 : 1694097

Streptomyces_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076026605.1\|1688314_1689094_-	hydrolase	A0A1V0DZX6	Clostridioides_phage	1.1e-07	36.9
WP_076026606.1\|1689139_1689847_-	C40 family peptidase	A0A0A8WF62	Clostridium_phage	1.1e-14	38.9
WP_076026607.1\|1690000_1690783_-	C40 family peptidase	A0A2L1IW19	Streptomyces_phage	1.0e-13	42.7
WP_014565355.1\|1690971_1691445_-	C40 family peptidase	A0A2L1IW19	Streptomyces_phage	4.2e-15	42.7
WP_011544283.1\|1691614_1692661_-	lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	1.8e-26	29.4
WP_003621166.1\|1692944_1693430_-	C40 family peptidase	A0A2L1IW19	Streptomyces_phage	2.3e-16	41.1
WP_014565358.1\|1693554_1694097_-	AAA family ATPase	U5J9X2	Bacillus_phage	1.7e-12	35.4

DBSCAN-SWA_7

1847189 : 1855630

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081381946.1\|1847189_1848440_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.5e-51	44.8
WP_013440362.1\|1848504_1848807_-	hypothetical protein	NA	NA	NA	NA
WP_076026647.1\|1848834_1849488_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	6.2e-25	36.2
WP_076026648.1\|1849489_1850008_-	hypothetical protein	NA	NA	NA	NA
WP_003621677.1\|1850219_1850867_+	deoxynucleoside kinase	Q5ULP7	Lactobacillus_virus	1.2e-49	48.8
WP_011544362.1\|1850884_1851583_+	deoxynucleoside kinase	Q5ULP7	Lactobacillus_virus	1.8e-54	47.9
WP_011678699.1\|1851874_1853335_+	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_003616418.1\|1853354_1854101_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-27	37.1
WP_003623392.1\|1854319_1855630_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.2e-50	32.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019120

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection