CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019058	Gardnerella vaginalis strain GV37 chromosome, complete genome	2 crisprs	DEDDh,cas3,WYL	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019058_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019058_1

151078-151190

Orphan

Consensus_repeat	Method
GATTGTGCTCACGATGGTTGCACTGAGCCATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019058_1

>merge|NZ_CP019058|1|151078-151190|CRISPRCasFinder
GATTGTGCTCACGATGGTTGCACTGAGCCATGTTGCGAAGACAACTGCTGCGGTGGTCATTGCAAAGTAGAGTGCACGGGCGATTGCGCTCACGATGGTTGCACTGAGCCATG

>NZ_CP019058|1|1|151078-151190|CRISPRCasFinder
GATTGTGCTCACGATGGTTGCACTGAGCCATG	TTGCGAAGACAACTGCTGCGGTGGTCATTGCAAAGTAGAGTGCACGGGC
GATTGCGCTCACGATGGTTGCACTGAGCCATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019058.1\|WP_076002565.1\|153269_154259_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|372253
NZ_CP019058.1\|WP_102704524.1\|155172_156753_-\|alveolysin	unknown	unknown	gnl\|CDD\|366559
NZ_CP019058.1\|WP_076002558.1\|141675_142383_-\|cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|226381
NZ_CP019058.1\|WP_004114131.1\|157221_157518_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP019058.1\|WP_076002563.1\|151326_152133_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349969
NZ_CP019058.1\|WP_076003124.1\|140399_141668_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019058.1\|WP_076002566.1\|157520_159062_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP019058.1\|WP_076002559.1\|142774_145369_+\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|274529
NZ_CP019058.1\|WP_041160543.1\|147151_148246_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019058.1\|WP_076002568.1\|160850_161759_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP019058.1\|WP_076002560.1\|145850_146618_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213231
NZ_CP019058.1\|WP_155760786.1\|145635_145824_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019058.1\|WP_076002557.1\|139510_140326_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP019058.1\|WP_076002561.1\|148235_148967_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019058.1\|WP_076002564.1\|152280_153273_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213235
NZ_CP019058.1\|WP_012913735.1\|162164_163784_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235967
NZ_CP019058.1\|WP_076002562.1\|149021_150362_+\|DNA-recombination-protein-RmuC	unknown	unknown	gnl\|CDD\|376878
NZ_CP019058.1\|WP_076002567.1\|159094_160594_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP019058.1\|WP_076002556.1\|138688_139489_+\|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|143483
NZ_CP019058.1\|WP_004105898.1\|161758_162073_+\|DUF2469-domain-containing-protein	unknown	unknown	gnl\|CDD\|313765

Protein	Function_ID	Function_description	E-value
NZ_CP019058.1\|WP_076002559.1\|142774_145369_+\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_CP019058.1\|WP_102704524.1\|155172_156753_-\|alveolysin	gnl\|CDD\|366559	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin.	0
NZ_CP019058.1\|WP_076002558.1\|141675_142383_-\|cell-wall-hydrolase	gnl\|CDD\|226381	COG3863, COG3863, Uncharacterized distant relative of cell wall-associated hydrolases [Function unknown].	1.32878e-12
NZ_CP019058.1\|WP_004114131.1\|157221_157518_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	1.73124e-28
NZ_CP019058.1\|WP_076002565.1\|153269_154259_+\|ABC-transporter-permease-subunit	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	2.17371e-05
NZ_CP019058.1\|WP_076002566.1\|157520_159062_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP019058.1\|WP_076002563.1\|151326_152133_+\|RNA-methyltransferase	gnl\|CDD\|349969	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.60986e-38
NZ_CP019058.1\|WP_076002568.1\|160850_161759_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.76533e-13
NZ_CP019058.1\|WP_076002560.1\|145850_146618_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	7.74462e-77
NZ_CP019058.1\|WP_076002564.1\|152280_153273_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	1.68776e-82
NZ_CP019058.1\|WP_076002567.1\|159094_160594_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP019058.1\|WP_076002557.1\|139510_140326_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	5.09458e-66
NZ_CP019058.1\|WP_012913735.1\|162164_163784_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|235967	PRK07208, PRK07208, hypothetical protein; Provisional.	0
NZ_CP019058.1\|WP_076002562.1\|149021_150362_+\|DNA-recombination-protein-RmuC	gnl\|CDD\|376878	pfam02646, RmuC, RmuC family. This family contains several bacterial RmuC DNA recombination proteins. The function of the RMUC protein is unknown but it is suspected that it is either a structural protein that protects DNA against nuclease action, or is itself involved in DNA cleavage at the regions of DNA secondary structures.	1.06619e-103
NZ_CP019058.1\|WP_076002556.1\|138688_139489_+\|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	4.71429e-89
NZ_CP019058.1\|WP_004105898.1\|161758_162073_+\|DUF2469-domain-containing-protein	gnl\|CDD\|313765	pfam10611, DUF2469, Protein of unknown function (DUF2469). Member proteins often found in Actinomycetes clustered with signal peptidase and/or RNAse-HII.	2.8633e-59

>NZ_CP019058.1|WP_076002562.1|149021_150362_+|DNA-recombination-protein-RmuC
MFDNIVMFVLMVVAVVITAIVVLAIVKHNSGTQGANGVNQREFNELRSQYEQARAQAQENGNQAIRYRTQAEQLAERLKFVEAELAKAQQAEQLRVNREEQLRAEREERERLNREKTLKEQGKVLEALAPVKDNLEALKNKVSQIEEGRKQEMGVLSTQLKGLSEQQTRLDRETSSLSAALRNNKVRGAWGEAQLKNIVESAGLLEHVDFDTQVVVTGVNGEQQRPDMVVYLPGGKTIPVDAKVPYADYQRACEIPDNASDEELARRSELLKAHAKALREHVRVLGAKAYWQAFETAPDFVVAFIPNEALLQAALEADPTLMDDAFAQKVALTSPVTLWAVLKSVAYAWQQQSLTDDAKELFDLSRELYDRFAVLGENASKLGVSLARTVAAYNKFASSLESRVLVTARKLQKLDQSKVIASIDLIDSDKADVKELSAPEVSVEDR
>NZ_CP019058.1|WP_076002561.1|148235_148967_+|hypothetical-protein
MKNNFRAWLEGRHYIVAIVAILLSVVLPSLMLVIFRSFVTQLPVYVGYICLPDSANVHNAVEGITFQCQSGSSVVNFVVPLYEVIVVGFIAAAFVCLAPIMVSWERFVMKRLRIYALSAALLCLFVSFGASVLIVRIIDLQLLSTLQMILGNAWIDIVLIMIGLACFGRFYGLAFGVFLAVMNIATQGLQSKIGLILRWYPSGTLPVIPGQSILLYVVVVLTVIAVCLWSGTCGRGLLYFERA
>NZ_CP019058.1|WP_041160543.1|147151_148246_+|hypothetical-protein
MTPSAFFAIGFTLGVIIGNRWAIVFSALLSFAIIWCCIYGVIIMRNGTIPQGDIFPRYWGSSLYAILPVSDAGIGAEPGLRMNPWLVTLRIFFVCVVIVSCILCCAHIRYFWQKGSYWCIKAISLSLIMPIVCACCIAMWGPKPWIRSGPFVPQCTTFKDTAFSVCVHPEEAYIRKLRAVKHLKTVASWFPKNQRDSQGKGIVLVLGNAFTPTNTEKSWNLTNSGLIKLRNLKATVIQQQTDTFVRRSEKYGDMTGIAQEVLQRFVPAKCASSAMKEVYVKKNLDSNASVTAFLLAQLPSRISNDVYGSYGFIPGEANDKVAMSINNADDAKLKQFVKNHVKELNQCRITPQQVLSELGDKHEK
>NZ_CP019058.1|WP_076002560.1|145850_146618_+|ATP-binding-cassette-domain-containing-protein
MQESYTGSGVQLVNVNFSYGKKQILHNLSIDLSFGICGLLGPNGAGKTTLLNVIATIYAPSSGKLFVHGFDVTDRVERAKARSNIGYLPQSFELMNASSVLKNVQYAAWARGLSWNAAYQAAWNALKQVGLEKQAHRIVAKISGGQRQRAGIACVIASQPAVLILDEPTVGLDPEQRIDIRNFLKSYSQKHTVIVSTHLVEDLAVIADRVIVLNEGIILLDGKMDNLLQYANREDLMVTPWESGYRHLLSKFHKN
>NZ_CP019058.1|WP_155760786.1|145635_145824_+|hypothetical-protein
MYVFRAEYVMKQIENGDTNMFAKKGFAIVAFATIAYDMPISAYAQMSGSVVGIDRENIRSCR
>NZ_CP019058.1|WP_076002559.1|142774_145369_+|ATP-dependent-chaperone-ClpB
MEQKFTTLAQDALSDAVQSAAAAGNAQVDTLHLADALLRQEQGVVRALIAQAGADAQQIGAEIRNALVALPSSTGSTTTKPDASRQLLAALSQAEKEMRAMGDEYVSTEHMLIGMVASAPNAVADIFRKHNVSADVLRKAVPTVRGGAKVTSPDAEGNYKALEKYSVDMTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKRLISLDLASMVAGSKYRGEFEERLKAVLKEIQQSDGQIITFIDEIHTVVGAGSAEGSMDAGNMLKPMLARGELRLVGATTLNEYREHIEKDSALERRFQQVFVGEPSVEDTVTILRGLKQRYEAHHKVTISDDAIVAAATLSNRYITGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRKVTRLEMEEMQLKKAEDAAARERLEKLQEELANSREKLTGLKARWDAEKAGHNKVGDLRAQLDAKRVEADKFTREGNLEQASRILYGEIPSIQKALEEAESQAANAKSEAKEPMVPDQVDADSIAGVVSEWTGIPVGRLMQGENEKLLNMEKELSKRVVGQSEAIQAIADAVRRSRAGIADPNRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFTNTILIMTSNLGSQFLVQEGLDDAAKRKAVMNAVHAEFKPEFINRLDELVMFHPLSREELGGIVDIQVRQVAARLSDRRISLDVSDSARAWLAEHGYDPVYGARPLRRLVQTEIGDQLARLLLSGKVHDGARVVADCAESDDHVTLKIA
>NZ_CP019058.1|WP_076002558.1|141675_142383_-|cell-wall-hydrolase
MNKKLFKTITIVAVLCVLWPTSSAFAKESYDDKLSDFANALPYYVNKEKLDKSVQEIAQYHHWSKEKVLDAEMELLQNPNINKYQQDKSSSQATIALPNAQHRGDFYFTPAGLHGHTGIYSQKNKIVEAVGPGEVAREKLAFKTLVAPGAIIRSVNTSNANRAKAADRARTYIGRGYNDAFWQPNKNDWGGLHCAQLVWASYKYGAGIDIDDGDDELVWPWDLEKTTKATTYRKL
>NZ_CP019058.1|WP_076003124.1|140399_141668_-|hypothetical-protein
MKQLSKKIIIVLLCFSATVIASAILFLLFWQQMPTQISYKQANLSHAVGAVAISDMTAGKEKKRDGFIVLLNNDGTSQTITTSAIESPNILWNTDGLYFVDAKFDYFLAQKSNMRIAIKHHKKLPAAQAGIFENNQHEVISVLDHGFTRTRKNQLEFNSITLGKPRHTDIMQSRIYDVSSACESGTYTISPSDNGTNSFNGTNGFVIKKLQDSIPIKHILKNSETTVHSFSTIGNDTAPCIRNTIISIGDTTEYKKDNPEFTFTTYGINRWNTQSGKFDFIPLTLQNKRIAYNYGEKHDFENISYGNRTMLNDRELLALDQGTGVLYKINTITGKTQITFTIPVNTSSKFNPKRYWMQTTKNAIAILDNANGEKTPQSTLYFLNKKNFKLQQTVHFDNTTSNLLAGKVDGCHFSDFAINPQM
>NZ_CP019058.1|WP_076002557.1|139510_140326_+|fumarylacetoacetate-hydrolase-family-protein
MRIARFSYNEVPQYAFVQKDETDGKDYLVALEGHPLSPQGVKPTGKRYALDADGVRLLVPVIPSKVYGLAKNYDTRSDDERATSSAASSHTAADMVIFTKPSTSVIGPDDPIVIPACSNDMNFEPEVAVVMGKIAKNVTADTAMNYVFGFTCVNDVTLRDCAGSDPMWTRAKGFDTSCPLGPWITTELNWRDAHISFTLNGENVPEADGTTARLIHSIPEQIAAISSFSTLLPGDVILTGTPYPAGTLQAGDEAIVHVDGIGSLRNVVVSE
>NZ_CP019058.1|WP_076002556.1|138688_139489_+|YggS-family-pyridoxal-phosphate-dependent-enzyme
MAYMTQKDLANTEVDCVRARQIADGVHSVQDAIVQAESHYGRKAESVTLLAATKTRDAGEIMAALRAGVRVIGENRPQEIVAKAEILRAQAAREGLSVGVNGEIPLYLIGQLQSNKINKVLPLANGIQSVDGIELAQKISARAQNLGLCVDVMLEVNVSGEATKSGCAPERAIDEAFAISSLPALNLHGFMTLGARVDDETIVRSGFAKLREIRDCVSKQLVQDYDGSSVKLELSMGMSGDFAWAIAEGSTMVRIGSAIFGPRAFV
>NZ_CP019058.1|WP_076002563.1|151326_152133_+|RNA-methyltransferase
MHEPNPITLAAKASDEPEFRPIGVGPWEEEHPGEPRPDNPESPNYDARFSTELLDEGDQRNVLDRYRYWKVEAIKADLDSKGRHEFEVAVENWTHDFNIGSMVRTANAFTAKKVYIVGPHKWNRKGSLMTELYQYVECCPTIETLVTNWRENMLKEAEEAHQFLLKAQAEGNKEAEKIANIKEQDAKNARVIALDIIPGAVAMENYKFPKRCLMLFGAEGPGLSKKALEMADDVVYISQFGSVRSLNAGAAAAVSMHAWIAQHAVPNC
>NZ_CP019058.1|WP_076002564.1|152280_153273_+|ATP-binding-cassette-domain-containing-protein
MLEFQHITKRFGAKTVLNDVSFVAEDGKVTGFLGPNGAGKSTTMRCALNLIHANSGTSLIDGKPYAKITSPMTEVGAVLDAKSAHRGRTAYNHLYSLALTHGISKKRVDEVIDITGLTSVKNRKAGSFSLGMGQRLSIAAALLADPHNLILDEPVNGLDPEGVKWVRELCKYYASQGRAILLSSHLMSEVALTADNLVIIAHGEILERTTVQDFVNAHSQHAIRLVTPEGEKLKSVLAQNRPECKILPDKRTPQDAQEGELFKVTGCELNQLAREIADNQIMVYQLNQEHASLEEAYLALTHGQEQYVTKALPNATAATGTQYADGGSAK
>NZ_CP019058.1|WP_076002565.1|153269_154259_+|ABC-transporter-permease-subunit
MSEQINQSVNQSVDQATSNSYKTGRSMNAQHLRLTFMHSLKSEMVKLRGLASTWWCMALAIVLPVVFSFIIAIVQKAISKVDFTKQGASASKSSGAVTMGPSDKSSLISSQEGIFNLVISFASISLIVIAIFAVLAITAEHSTTSIQASLTSVPRRGMFFTAKFVAIAIYVFVVQLIAMAVSLVAAELAFMGENISGLSGSRTWQLPLMLFLGSPVIMVVVAAMAYGFGMICKSTAGGIMCVIGAVMILPTVLSIIVISSGFAKWTLVLTQLLPATAVSQFLGDSSSSNGKFASNVNVAFEWWQSGLVVLAWAVVMYAIGYVIEKHRDI
>NZ_CP019058.1|WP_102704524.1|155172_156753_-|alveolysin
MKSNKNRRIHMKSTKFYRNAAMLLLAGATIIPQCLAVPAMADSSAKPSAPAASCAASKDSLNNYLWDLHYDKTNILARHGETINNKFSSDSFNNNGEFVVVEHQKKNITNTTSNLSVTSANNDRVYPGALFRADQNLMDNMPSLISANRAPLTLSIDLPGFHGGESAVTVQHPTKSSVTSAVNGLVSKWNAQYAASHHVAARMQYDSASAQSMNQLKAKFGADFAKIGVPLKIDFDAVHKGEKQTQIVNFKQTYYTVSVDAPDSPADFFAPCTTPESLKNRGVDSKRPPVYVSNVAYGRSMYVKFDTTSKSTDFQAAVEAAIKGVDIKPNTEFHRILQNTSVTAVILGGSANGAAKVITGNIDTLKALIQEGANLSTSSPAVPIAYTTSFVKDNEVATLQSNSDYVETKVSAYRDGYLTLDHRGAYVARYYVYWDEYGTDIDGTPYVRSRAWEGNGKYRTAHFSTTIQFKGNVRNLRIKLEEKTGLVWEPWRTVYNRTDLPLVRQRTIKNWGTTLWPRVAETVKND
>NZ_CP019058.1|WP_004114131.1|157221_157518_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MPTFTREEIEHLGVLSQIALSDEEISRLQGELNVIAESINKVQEVAGEDVPPTANPVPLEAYLRPDEPATPLTQEEALSGAPRSESGMFVAPRILGEE
>NZ_CP019058.1|WP_076002566.1|157520_159062_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTNTQDLVKLSAADMAKAVKAKEVSSRELVEAHLAVIEAAEPEIKAFLHVSADVALEQADAFDKKNANGEAEGLPELAGVPIAIKDMIVTKGIPTTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQGSSTEHSAYQTTCNPWDTERVPGGSGGGSAAAVAAFEAPIALGTDTGGSIRQPGALTGTVGAKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGNDRRDSTSIPAPVPPMAQAAREGARRDLKGLKVGLVKELSGDGFQPGVEARFNEAVQLLKDMGAEVTEVSCPHFPYSLAAYYIIMPSEVSSNLARYDGMRYGLRVMPPADKPQTAANMMAATREAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIRDFEEAFKKVDVLISPTSPTTAFKFGEKMDDPLSMYMNDIATIPANMAGVPALSLPAGLSDDGLPVGIQIIAPQCHDEKMYKPAAALEAALEEQWGGSIWKSLKAGWLDSLAK
>NZ_CP019058.1|WP_076002567.1|159094_160594_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MAEKLMKYADAVEQFDPVFGLETHVELSTRTKLFCPAEVSFGGEPNTQLTPVSLGLPGSLPVVNKTAVDYAIKLGLALHCEIAEWSQFARKNYFYPDMPRDYQISQYDKPTNGNGYLDVELEDGTVFRVPIERAHIEDDAGKNTHVGGADGRIEGANHSLVDYNRAGVPLIEIVTKPIEGAGSRAPEIAGAYMRAIRDIVRALNISHARMEQGNMRADVNVSLRRKPTDPFGTRSETKNVNTFRGIEKTLQYEIRRQAAILSEGGEILQETRHWDEATQTTAGGRVKSDADDYRYFPDPDLVMLHITKEHIERMKAQMPEMPRERRNRLQSEWGISDLEMRDILNADALDLVEETVKAGATAAGAKKWWLGELAREANTRGVTLEELPITPQDVAEVEKLIADGNLNDKLAKQTVACVLAGEGKPDEVVKKHGFKVMNDDGALEAAVDAALAADPEVAEKLKSGNMKPMGAIIGAVMRATKGQADAKAVTKIVMAKIKG
>NZ_CP019058.1|WP_076002568.1|160850_161759_+|GNAT-family-N-acetyltransferase
MQQTNDGVINSRELPKSIVIPQIRGEMAHLRPATCDDFQRMDDLCAFDGAAVITGKDANSERSMVHSWVESSMQWTKDSLIGENPSESCRFAGDVQLRHTIAWAIVPDVLDDSNNASGDIIGMIFLIDIDGWSRSARIQVVLGKNYRGRGYSRDAMPRVMTYAFASEPTGLGLHRIWVGVPATNTRSLSVYQSLGFVKTGTARDALWDAQNQKYQDFVVMDTLVDEYDAIRSLDAFGLHVIEENPGVIEALSAHEHSVAIPVHRDNLDEAWPYNVNVSEGSSSKKAWWRIIGRGRKRNTEGK
>NZ_CP019058.1|WP_004105898.1|161758_162073_+|DUF2469-domain-containing-protein
MSAEDLDNYETDAELALYKEYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQLTDAWVWDVYRPSRFVKNVRIVTFKDVNVEEVQKTDIDIPESIA
>NZ_CP019058.1|WP_012913735.1|162164_163784_+|NAD(P)/FAD-dependent-oxidoreductase
MTDTQSPKESVVIIGGGPAGLTAAWELVKDGGSSRYDVTVLEATREFGGISRTVKYNGNRMDIGGHRFFSKDDRIMQWWREMLPLQGAPSYDDKKLGRHHDLEAGGPDPEVEDEVMLKRHRVSRIFWNHHFFDYPISLSAATLRSMGFILTMKVGFSYLWSMIHKLPETNLENFYINRFGKKLYSMFFEGYTEKLWGRHPSQISADWGAQRVKGLSIVEVLKNAFSKLFPKKKGKEKEVETSLIEEFWYPKLGPGQLWETVERRCRENGATVRTDAKVVAIKQADGKISSVVVEDANGERSELHADQFISSMPIKDLVAALEQGANGDEKAEVPAEMQRVAKGLPYRDFVTVGLLVKRVRLRNTTTIPTLGNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPYLVKDVDNTVWIGLEYFCDEGDDFWNMSDDDARKMAIDELTRMQVINGEEDVLDSHRERVPKAYPAYFDTYAQMPELIDYLDGFGNLYCVGRNGQHRYNNQDHSMATAIEAVEDIRTGETSKKNVWSVNTEKSYHEKK

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Crispr_ID: NZ_CP019058_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019058_2

217222-217295

Orphan

Consensus_repeat	Method
TTTTGCAAAAATGTAGGTATAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019058_2

>merge|NZ_CP019058|2|217222-217295|CRISPRCasFinder
TTTTGCAAAAATGTAGGTATAGATGAGTATTTTTTGCGTGCTATGCCTTCATTTTGCCAAAATGTAGGTATAGA

>NZ_CP019058|2|2|217222-217295|CRISPRCasFinder
TTTTGCAAAAATGTAGGTATAGA	TGAGTATTTTTTGCGTGCTATGCCTTCA
TTTTGCCAAAATGTAGGTATAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019058.1\|WP_076002581.1\|216471_217191_+\|cell-filamentation-protein-Fic	unknown	unknown	gnl\|CDD\|182396
NZ_CP019058.1\|WP_033888552.1\|215213_215528_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184055
NZ_CP019058.1\|WP_012913757.1\|216267_216453_+\|antitoxin-VbhA-family-protein	unknown	unknown	gnl\|CDD\|212155
NZ_CP019058.1\|WP_004109948.1\|209807_210350_+\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NZ_CP019058.1\|WP_076002590.1\|229599_230934_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|226957
NZ_CP019058.1\|WP_155760788.1\|218744_219788_+\|thiamine-biosynthesis-protein-ApbE	unknown	unknown	gnl\|CDD\|224394
NZ_CP019058.1\|WP_076002587.1\|225772_227503_+\|FTR1-family-iron-permease	unknown	unknown	gnl\|CDD\|223744
NZ_CP019058.1\|WP_076002588.1\|227598_228243_+\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378461
NZ_CP019058.1\|WP_076002586.1\|222284_225584_+\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NZ_CP019058.1\|WP_076002589.1\|228315_229587_+\|DUF2318-domain-containing-protein	unknown	unknown	gnl\|CDD\|226828
NZ_CP019058.1\|WP_076002582.1\|217453_218704_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP019058.1\|WP_012913771.1\|230923_232291_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|274576
NZ_CP019058.1\|WP_012913755.1\|211047_212709_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NZ_CP019058.1\|WP_004574172.1\|210449_211031_+\|ATP-synthase-F1-subunit-delta	unknown	unknown	gnl\|CDD\|237387
NZ_CP019058.1\|WP_076002580.1\|215780_216017_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019058.1\|WP_004574170.1\|212712_213717_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|235535
NZ_CP019058.1\|WP_004109950.1\|209518_209752_+\|ATP-synthase-F0-subunit-C	unknown	unknown	gnl\|CDD\|349414
NZ_CP019058.1\|WP_076002585.1\|221615_222245_+\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341170
NZ_CP019058.1\|WP_012913756.1\|213723_215211_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NZ_CP019058.1\|WP_076002584.1\|220014_221619_+\|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl\|CDD\|211578

Protein	Function_ID	Function_description	E-value
NZ_CP019058.1\|WP_076002581.1\|216471_217191_+\|cell-filamentation-protein-Fic	gnl\|CDD\|182396	PRK10347, PRK10347, putative adenosine monophosphate-protein transferase Fic.	5.24499e-32
NZ_CP019058.1\|WP_033888552.1\|215213_215528_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184055	PRK13442, atpC, F0F1 ATP synthase subunit epsilon; Provisional.	2.56627e-25
NZ_CP019058.1\|WP_012913757.1\|216267_216453_+\|antitoxin-VbhA-family-protein	gnl\|CDD\|212155	cd11586, VbhA_like, VbhA antitoxin and related proteins. VbhA is the antitoxin to VbhT. The VbhT toxin of the mammalian pathogen Bartonella schoenbuchensis is responsible for the disruptive adenylation of host proteins. VbhT also induces FIC-domain-mediated growth arrest in bacteria; it is inhibited by this antitoxin which binds to block the ATP binding site of the VbhT FIC domain.	3.13358e-13
NZ_CP019058.1\|WP_004109948.1\|209807_210350_+\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	9.99527e-40
NZ_CP019058.1\|WP_155760788.1\|218744_219788_+\|thiamine-biosynthesis-protein-ApbE	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	1.25814e-29
NZ_CP019058.1\|WP_076002587.1\|225772_227503_+\|FTR1-family-iron-permease	gnl\|CDD\|223744	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism].	2.66964e-43
NZ_CP019058.1\|WP_076002588.1\|227598_228243_+\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|378461	pfam10634, Iron_transport, Fe2+ transport protein. This is a bacterial family of periplasmic proteins that are thought to function in high-affinity Fe2+ transport.	7.31338e-77
NZ_CP019058.1\|WP_076002586.1\|222284_225584_+\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
NZ_CP019058.1\|WP_076002589.1\|228315_229587_+\|DUF2318-domain-containing-protein	gnl\|CDD\|226828	COG4393, COG4393, Predicted membrane protein [Function unknown].	3.48114e-44
NZ_CP019058.1\|WP_076002582.1\|217453_218704_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	2.97508e-26
NZ_CP019058.1\|WP_012913771.1\|230923_232291_+\|FtsX-like-permease-family-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	2.67367e-17
NZ_CP019058.1\|WP_012913755.1\|211047_212709_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_CP019058.1\|WP_004574172.1\|210449_211031_+\|ATP-synthase-F1-subunit-delta	gnl\|CDD\|237387	PRK13430, PRK13430, F0F1 ATP synthase subunit delta; Provisional.	2.0254e-32
NZ_CP019058.1\|WP_076002590.1\|229599_230934_+\|FtsX-like-permease-family-protein	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	2.79338e-20
NZ_CP019058.1\|WP_004574170.1\|212712_213717_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|235535	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated.	2.28846e-113
NZ_CP019058.1\|WP_004109950.1\|209518_209752_+\|ATP-synthase-F0-subunit-C	gnl\|CDD\|349414	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c. Subunit c (also called subunit 9, or proteolipid) of the Fo complex of F-ATP synthase. The F-ATP synthase (also called FoF1-ATPase) consists of two structural domains: the F1 (factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons though the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts, or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Methanosarcina acetivorans.	3.04685e-11
NZ_CP019058.1\|WP_076002585.1\|221615_222245_+\|restriction-endonuclease-subunit-S	gnl\|CDD\|341170	cd17281, RMtype1_S_HpyAXIII_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Helicobacter pylori 26695 S subunit (S.HpyAXIII/Prototype S.Hpy26695ORF4050P) TRD1-CR1, Neisseria meningitidis 510612 S subunit (S.Nme510612ORF1157P) TRD1-CR1 and Streptococcus mitis SVGS_061 S subunit (S2.Smi61ORF7905P) TRD1-CR1. Helicobacter pylori 26695 S subunit (S.HpyAXIII/Prototype S.Hpy26695ORF4050P) recognizes 5'... CTANNNNNNNNTGT ... 3', and the recognition sequences of Neisseria meningitidis 510612 S subunit (S.Nme510612ORF1157P) and Streptococcus mitis SVGS_061 S subunit (S2.Smi61ORF7905P) are undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, Helicobacter pylori 26695 S subunit (S.HpyAXIII/Prototype S.Hpy26695ORF4050P) TRD1 recognizes CTA/TAG, and TRD2 recognizes ACA/TGT. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	7.40368e-133
NZ_CP019058.1\|WP_012913756.1\|213723_215211_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_CP019058.1\|WP_076002584.1\|220014_221619_+\|type-I-restriction-modification-system-subunit-M	gnl\|CDD\|211578	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM). Function: methylation of specific adenine residues; required for both restriction and modification activities. The ECOR124/3 I enzyme recognizes 5'GAA(N7)RTCG. for E.coli see (J. Mol. Biol. 257: 960-969 (1996)). [DNA metabolism, Restriction/modification].	0

>NZ_CP019058.1|WP_076002581.1|216471_217191_+|cell-filamentation-protein-Fic
METVFDPYLIPHIRVLKNKSNINNQIELDKYENDAVLTRCSILYENLPHAEGTVKQLQWIHHYLFQDVYDWAGQIRTIDMTKGGGEPFHPLEYMGVGICYCEQTLKNDNLLQGLSIDAFISKLSVNYNNFNVLHPFREGNGRTQRVFWDIVARDAGYHFDWGLITQRVNDEASIQAKDANDTKLLEDMFHIITKPLNVELLAQQQFAHLVEEEYEYAPNVASVLQDKDYAAYKTRYGID
>NZ_CP019058.1|WP_012913757.1|216267_216453_+|antitoxin-VbhA-family-protein
MIDKETQRRRQENLGLAIASGKLEGNSPSKEFLYDANQYANGLISSNEFVARMRSRYGVMD
>NZ_CP019058.1|WP_076002580.1|215780_216017_-|hypothetical-protein
MQSCIFKSKDSQNLSKKKEPSHTNANRHSLSKVKKFYSFESESANLLANTRHDSYDIEGIRVIDIAQWLLETNTSFRL
>NZ_CP019058.1|WP_033888552.1|215213_215528_+|F0F1-ATP-synthase-subunit-epsilon
MSEKQVKSLHVSVVAARHPVWEGDAKFVVIPSVNGAMGVLPGHEAVLALIDHGFVKVDDLKGVRHVFKVTDGFYSVDSDNITIAVEHSCNVDKDGNVLPNAKVI
>NZ_CP019058.1|WP_012913756.1|213723_215211_+|F0F1-ATP-synthase-subunit-beta
MAENQTTAPPEAEQEVDPTAGRVTRVQGSVIDVEFPVGYLPDIYNALKVDINTVGNTEGDTVHEITLEVEQHLGDSTVRAVALKPTDGLVRGALVRDTGGPISVPVGDVTKGHVFDVTGNILNAKPGEHIEITERWPIHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMADAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERITSTRGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIALIGIDELGEEDKTTVSRARKIEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDEIPEQAFSGIGGIDDLERRWHDMQQEFGA
>NZ_CP019058.1|WP_004574170.1|212712_213717_+|F0F1-ATP-synthase-subunit-gamma
MSSQLALKSRIISTQSLGKIFKAQEMIASSHIAKARDIALNAKPYSDAIFDAVQALVAHHEANIKHPIFGKEHAGNRVAVLALTSDRGMAGAFTSSIIRETEALLAKLDAEGKHAELYVYGRRGATYYKYRNRDVAGTWEGSTDHPDVTIAEKISDTLMDAYMTPEAEGGVSELYIVFTEFINMVRQKVRTLRMLPVELVPLKDGEEFSMHRPDYEAASGPSAALSSTSAVSAREEAVSRSNPEAVEYCFEPSPDEVLDAVLPKYIQSRIHECLLTSAASETASRQNAMHTATDNARNLVDDLTRKLNASRQASITQELTEIIGSADALNNEED
>NZ_CP019058.1|WP_012913755.1|211047_212709_+|F0F1-ATP-synthase-subunit-alpha
MAELSIDPALIRKALDGFVDSYKPTDMPTQEVGYVVTAGDGIAHVAGLSGCMANELLTFENDTLGLAFNLDAHEIGVVILGDFTGIEEGQEVYRTGEVLSVPVGDAYLGRTVDPLGNPIDGLGAIECSERRILEAQAPDVIHRHPVDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKTAIAIDTIINQRANWETGDPKKQVRCIYVAIGQKGSTIASVRQSLEEAGAMKYTTIVASPASDSAGFKYIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPGDVFYLHSRLLERCAKLSDDLGGGSMTGLPIIETKANDVSAYIPTNVISITDGQIFLQSDLFNAGQRPAVDVGISVSRVGGAAQAKALKKVSGMLKISLARYKSLESFAMFASDLDAASKAQLTRGARLTELLKQKQFSPRAMEQEVVSVWAGTHGKLDDIPVKDVLRFESELLDYLDKGTDILQVIRDTEDFTKETEAKLDAAIDDFRRTFKTSAGKPLIVKDSLPPAENPAPVEKEQLVAKPKADSREPEGK
>NZ_CP019058.1|WP_004574172.1|210449_211031_+|ATP-synthase-F1-subunit-delta
MPEKASRANDSLSRSSLAQAISDAHDEAQRISDELSSMMDMIDKYPELSDAITDPNRSSEDKSRLIDELIGGKAHPVVLRIMHYLVGTWHGGAESGKTGSFGGAWSGFEREAGETLVTVTTAQPLTDKQIKRLIEIYSNKLGHRAYINPIVDPNVLGGMRIQIGDQITDRTMLMQLKQLQRSARNGAWTQAVK
>NZ_CP019058.1|WP_004109948.1|209807_210350_+|F0F1-ATP-synthase-subunit-B
MAYAAGSNKLALFLPEPYDVLWSLVVLVVLAAFFYKFVMPKFQAILDERAEKIEGGMAKAANVQREADELKSQIENELSQAQTDAAKTREEARSEASKIIGEARQRAEKDAAKIISEAQHSIEAQHKHAMSSLQGEVSVLAAALAGKILASKLDDDTVSSKIIDHVIDEVGDTKNSDQSK
>NZ_CP019058.1|WP_004109950.1|209518_209752_+|ATP-synthase-F0-subunit-C
MNSIIALAGLTGNLSILGFAVATISPALGMAIVVSKAMESTARQPEVGNRIQLFMFVGLAFIEVLGLLGFVSYIMGA
>NZ_CP019058.1|WP_076002582.1|217453_218704_+|Fic-family-protein
MDYKTIRTIVAMSKSNAKPCDIAEEEYRLRIDNPVTYRSGIVFDGHEIFAMCVTDLVTCMNYIANTEKAVEKAWNELSRFAQREYLMQLIAKEVQNTNIIEGVHSTRKELSKALDAANEQNKHTRFSEFTKLFLELADSNECDTSIPQTLQDIRKIYDSIMQGELEANNIPDGEIFRSGKVSIRDGANNVVHDGDATEAEIQKHLTQMLSLMNSSDVPTLIKACMCHYAFESVHPFYDGNGRTGRFLLALQLHEQLSMPTILSLSSIIYAEKSGYYAAFSKAQELFNCNDLTMFCCTMLEYIVKAQGEVFENISVQLKHIIYCMGKLRELFPEEEISKVQREALSILLQNKLFSYNPTPMTRKQLSEYVGNAIGEQVGERKIVSALNGLIELEMVDSIGERPLRYELSKKANEMFA
>NZ_CP019058.1|WP_155760788.1|218744_219788_+|thiamine-biosynthesis-protein-ApbE
MRKVMFGNVMAIERALGTGIIISSSVPISQRLQKRIRDFIEEYESVLSRFRADSLVSRMARAEHGGEFEFPTWAQPLFALYSEFYAATHGAFDACIGADLLALGYDNSVQFVPESASSASENSGSASASWSKYHRALPVTWADISRDDGGTTLRTSQPVQLDFGAAGKGYFIDLVTQIIKEEFSEQLPADFDFLVNAGGDMRACFGKENSQIKVALENPFDATQAVGVASIASGALCASSAARRRWKVKDTNCLAADAFESNVVATHLINALDGVPSQKLSASWTYVPAKTCAFPTAYADALATALFISQESDLQKIAQTTGAEFAVMQPNHALRKTCAFPARFFAE
>NZ_CP019058.1|WP_076002584.1|220014_221619_+|type-I-restriction-modification-system-subunit-M
MDTRKEEERAELHRTIWKIADDLRGSVDGWDFKAYVLCTMFYRYISENLCDYINKDEHESEGGDPNFDYAKISDEDAEPLRSEMISEKGFFILPSELFCNVLKNAPQDSNLNETLSRVFRNIEASSQGTDSSGDFKGLFSDYDVNNIKLADTVEGRNKRFVKLLQVISEMKLGSVNNNVIEAFGDAYEYLMGLYASNAGKSGGEYFTPAEVSMLLTRLGTVGKSSISDVYDPACGSGSLLLKAKKVLGIENINGGFYGQEKNVTSYNLCRMNMFLHDVNFNKFEITCGDTLINPQIDANKKFELVVSNPPYSTSWEGDSNPLMINDPRFAPAGVLAPKSKADMAFVLHCLAHLAEDGAAAIVCFPGIMYRGGAEQKIRQYLVEHNAVDCVIQLPSNLFFGTSIATCIMVLRKNKQNDTSILFVDASREFVKSTNSNKLSDENIEQIVKWYTSRQDVEHIAHVASLEEVESNKYNLSVSTYVEAEDTREKINITELNAQIASVCAREQELREQIEKIVSEIESGSVSFDNSEVAQ
>NZ_CP019058.1|WP_076002585.1|221615_222245_+|restriction-endonuclease-subunit-S
MTSRLEELIAELCPNGVEYHSLEELFVIKNGYTPSKSNSEFWTDGTVPWFRMDDIRAHGRVLSDSIQHVTKSAVKGGKLFPANSIILATTATIGEHALVIVDSLANQQFTFFSKRESLDFNLDMKYVFYYFFIIDEWCKRNVNAASFASVDMPRLRKLEIPVPPIEVQSEIVRILDTFTELTAELTAELTARKKQYEYYRDQLLTFKRA
>NZ_CP019058.1|WP_076002586.1|222284_225584_+|type-I-restriction-endonuclease-subunit-R
MKIVLENQDSTVMSTFTPSERNDGSYQSEAQLEEEFINILQSQGYEYAHIHNEKDLIANLRVQIEKLNDYHFSNDEWERFFKENIANSTDDIVKKTDTIQRDNVKILKKDDGTDKNITIIDKENIHKNIVQVINQYAVNANDNANNNDANGPARSNRYDVTVLVNGLPMVHIELKRRGVPIREAFNQINRYARDSFWAGSGLFGYVQIFVISNGTETKYYSNSTRNNAYNEQKSKGSSKSTTSNSFEFTNYWSDAQNTIISDLCDFARTFFAKHVILNILTKYCVFNADKCLMVMRPYQITAAENIVNRVKYMFAHASKTPASERQKGGYVWHTTGSGKTLTSFKTSQLVKALKNAEGNNLVDKVLFVVDRKDLDYQTMREYDRFEKGAANSNTSTSVLTKQLEDNTEECRLIITTIQKLSRFISNNPSHEIYKKRIVFIFDECHRSQFGGMHADIVKHFKNSLLFGFTGTPIFEANAAGPDAAHISTTEQTFGPCLHAYTIINAINDKNVLPFRVEYVATVKTSSELEKATDELVKDINRPDVIRHKDRVHNVVQYIIEHFTQKTYRNEKTYKYKRIINVKELAADKHNTLEAKKSSEEVDINGFNSIFAVADIPLAKAYYNEFKKQQQNLPPSERLKVVTIFSYAVNEGESDSSEYSNGMGSLGEENSESTAKLDANSQEFLESAIKDYNEMFNTAYDASNNKFQNYYKDVSIRMKNKEIDVLIVVNMFLTGFDATTLNTLWVDKNLRMHGLIQAFSRTNRILNSVKTFGNIVCFRDLSYRVDEAVALFGDKDAQGIVLCPTFEQIFNGYVDDKGIERCGYSDLVNELMEKYPLQGFNIVGEENQKKFISLFSNILRLRNMLKAFDQFEGNEIIKERDMQDYLGHYQDLHEEWKRKEQKGEIANITDDVVFEMELVRQVEVNIDYILMLVEQYHSRHCKDKNVLASIRLMVDASPQLRSKKKLIEGFIAQLNENELGKLVDSEGNITVYDSNGNKVSIVDCWSEYVEQKYNHDLAQFVQSEGLNDALTRKFMEKSFSAGEVSELGTDINDLMPRMSRFGAAAKARAEKKSRIVESMRNMFNEFVGLIGFSQYDSQKD
>NZ_CP019058.1|WP_076002587.1|225772_227503_+|FTR1-family-iron-permease
MRACKSVRRVVSGATALMLAMCMVMCAFASFVISSFAVTTPAFATDADRSYASWSEVSKAIDSQLQQGQSEYKSGNNSGAATRFQAAYNSVYVASNMITVVRDTFGQNKVQEQGDQFQQLQTLVYQQNQGSQISAVSTALAADVAQTASSLDANLKVDKPNVYAQKLRAQIKAERKKLDAAKKKNLGRNGRTWGQVAREMNVILDKSVAKYKSAKGNKTQVASAVDLINEAYYQYYEKLGFEKNVMNAISGSRVSTVEYQFKECRQTMNNGATVEQAKKFVTDLKAMLIEDAAKLDKGASSSANPFMQFITSSFGQAFVILLREGLEALLVVAAIIAYLVKSGHKNMVKYIYLGIAAGIVASLAVAALFGLLFNGSGPQQEITEGVVALFAMLMLLYTSNWMISRSSVQAWNKYISEQTTAAVSKGSLVSLALLSFLAVFREGAETVIFYQAIFAVSNGADSMIWGGFISAAAVLVVIFLLIRFASVHIPIRPFFTGTSALMSVLVVIFAGGGVHALIEGDALEGMYIQGLPTNDWLGFYPYVETIVAQIVAAIVVISLLCVSIARSRGKRAVENK
>NZ_CP019058.1|WP_076002588.1|227598_228243_+|amino-acid-ABC-transporter-substrate-binding-protein
MKNNKMTALAALALAGLLALAGCGSNGNSAKTDAKSQATEQKADDKADDKGGDKGFEEVPVGPHQDQNIGPLTIGAVYFQPVDMVPAGMGLKASEASFHLEADIHANQKGTKLGYGKGEFIPDLTVNYEIVDKASGESVGKGTFMQMNASDGPHYGANVKLDKAGNYKLVLSIESPEKKGWMLHVDPATGVTGRFWTEPIKATFDDWKYTPRQW
>NZ_CP019058.1|WP_076002589.1|228315_229587_+|DUF2318-domain-containing-protein
MLRLFVAVMPGLLPLALLTMGLSTSLTVGEGRDKPLSARWRLYGLSAGTVAALIFAILRASVVINQRNFINMPALCIAVPLDIAAIIVVIFSHKIIKNWRNCPLLMHISNAIGACCLAFTVFYALPDVILQLTIFVDSSTPPFTSDMLLRALGFVLGVIAAICLSLMVRSLRTTSNAICFKIAVVLSMIILLVQHITSLLQIMQGSILLYMDDFSFSVLVWLINNAPLMIMAQISVFMIPAAASVIIGFKTAVVGENAAEIRTKRAFKRKSRKSALAALLAAVTVILTLTVGVSIMNIKPTLTPPEPYELHDGVATINYVQVSDGHLHRFQYKAKDGTVMRFIIIKKNGGAYGVGLDACENCGDAGYYEKDGKIICRKCDVAINLATIGFKGGCNPIPFPYKAGHGKITIHTADLDALSSHFK
>NZ_CP019058.1|WP_076002590.1|229599_230934_+|FtsX-like-permease-family-protein
MFMMRMVARSLVRQLKKRVLIALVVCLSACVSVSMLSVVYDVGDKINAELSSYGSNIVVQPKSSAVVNDLYASREQIDTNGSESLKAAESHESTASLKESDAAKIKMIFWAFNITNFAPKIIVHADLEAKSSGDLVVPIVGTWFNRKLALASGETTVVGVRGLRSWWKINAGRWAKDNKSEAMVGAQLAERLHLKLGQRLRLIRDGREVSLRLVGVYDSGDDDNNAIYAGSSDAQGLANKPNKVDSIEVKALTTPENDLARKAAKNPAALSQEEWETWYCTAYPSSITYQIEEVIPGAVAKQVRQVAALQGNVLNKTRAVMVLMTALSLIAAAVAVANLMAASISERSGELALLKALGARDGAVARLMLMETAVIAFGGTLLGMALGFAVAQIIGFTVFGSSILFRPMVFVLVFVLLALTVLAAAGSSIRSILSVRPAEVLHGR
>NZ_CP019058.1|WP_012913771.1|230923_232291_+|FtsX-like-permease-family-protein
MAGKSYMTSNNSMFITMLFSAVFRRKSRALMAVIATLVGAATLFCLAAICLVVPQQMSDEMRAYGANIIVTPIEGEWKNGIDRAMVLHTNDMVLAKGAMRSATYRYENVRINAAPYVLAGIDVRSVKSLNKHWNVDGSWPSSGNVMVGRDVALAMGLKIGSRIAIAYRSSDNTAGSHKPAEKSANKSANKSTSESANKSTNQSADKPAENQAQNSSANSSDQSAQNSSQQKLVEGRVSTDIMDTHGTTFRVCGILDTGGAEDSMLYALNADVNSLTGVKRGADVIAYSSSSPSVDAVVRSINDMTSMRVRAQQVTKVTAADTGIITMLRSLFCIVSLVVLVLMMVGVSTTISSIVQQRRNEIGLRKALGASARSIGVEFTAEAGVYGFVGSIAGTAVGYVFARLLAAMVFSRDLGVNWWLVVFSIVFSVAASCVAALPPVLRASKIDPAIVLREE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

238012 : 245868

Brucella_phage(14.29%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155760789.1\|238012_238291_+	addiction module killer protein	A0A141GEX6	Brucella_phage	1.2e-14	50.6
WP_076002594.1\|238284_238572_+	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	9.6e-15	47.1
WP_041160459.1\|238784_239378_-	hypothetical protein	NA	NA	NA	NA
WP_012913780.1\|239750_240830_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	6.5e-112	61.0
WP_103013777.1\|240912_243138_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	5.7e-187	47.9
WP_004109846.1\|243223_243724_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	2.7e-12	31.6
WP_033888558.1\|243727_243988_-	glutaredoxin-like protein NrdH	A0A2H4J2C2	uncultured_Caudovirales_phage	1.7e-10	40.0
WP_004109841.1\|244413_245868_+	NADP-dependent phosphogluconate dehydrogenase	M1T2E7	Synechococcus_phage	3.2e-29	29.8

DBSCAN-SWA_2

564127 : 636560

Erysipelothrix_phage(42.86%)

holin,portal,capsid,tRNA,protease,tail,head,transposase,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004105119.1\|564127_564628_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_004573912.1\|564807_565863_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_033888660.1\|566233_567031_-	thiamine diphosphokinase	NA	NA	NA	NA
WP_076002696.1\|567330_569217_+	asparagine synthase (glutamine-hydrolyzing)	A0A0G2Y824	Acanthamoeba_polyphaga_mimivirus	1.3e-30	28.9
WP_100066583.1\|569483_570209_+	translation initiation factor IF-3	A0A2I7S9Q1	Vibrio_phage	9.6e-11	37.1
WP_004128670.1\|570189_570384_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_004105106.1\|570451_570835_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_076003142.1\|570929_571889_+	site-specific tyrosine recombinase XerD	A0A1P8DJJ6	Virus_Rctr41k	1.2e-16	27.9
WP_076002697.1\|571937_572777_+	ParA family protein	Q8JL10	Natrialba_phage	6.7e-24	31.1
WP_004110395.1\|572969_574892_+	translational GTPase TypA	E4ZFJ7	Streptococcus_phage	1.7e-22	28.1
WP_004110392.1\|574937_575345_+	hypothetical protein	NA	NA	NA	NA
WP_076002698.1\|575428_576427_+	chorismate mutase	NA	NA	NA	NA
WP_076002699.1\|576420_577506_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
WP_012913969.1\|577529_577823_-	hypothetical protein	NA	NA	NA	NA
WP_004110385.1\|577908_578877_+	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	1.0e-23	25.8
WP_004110383.1\|579263_580892_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004105077.1\|581093_582020_+	ABC transporter permease	NA	NA	NA	NA
WP_033888662.1\|582047_583025_+	ABC transporter permease	NA	NA	NA	NA
WP_033888614.1\|583049_585074_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-19	30.0
WP_076002700.1\|585253_586120_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_004105066.1\|586299_587064_+	DUF3710 domain-containing protein	NA	NA	NA	NA
WP_076003143.1\|587190_587937_+	DUF3159 domain-containing protein	NA	NA	NA	NA
WP_076002701.1\|588007_589414_+	class I SAM-dependent RNA methyltransferase	E4ZFI6	Streptococcus_phage	1.1e-18	23.2
WP_004110367.1\|589806_590100_+	DUF2089 family protein	NA	NA	NA	NA
WP_004110365.1\|590096_590270_+	hypothetical protein	NA	NA	NA	NA
WP_076002702.1\|590549_591011_+	hypothetical protein	NA	NA	NA	NA
WP_076002703.1\|591023_591575_+	hypothetical protein	NA	NA	NA	NA
WP_076002704.1\|591762_592416_+	response regulator transcription factor	NA	NA	NA	NA
WP_076002705.1\|592450_593623_+	exodeoxyribonuclease V	NA	NA	NA	NA
WP_103043529.1\|593827_593929_+	hypothetical protein	NA	NA	NA	NA
WP_076002707.1\|593925_594195_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_076002708.1\|594187_594463_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_081378924.1\|594583_595489_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	6.3e-44	39.1
WP_076002709.1\|596085_596718_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_016815920.1\|596777_596999_+	hypothetical protein	NA	NA	NA	NA
WP_076002710.1\|597010_597319_+	hypothetical protein	D0R0B4	Streptococcus_phage	1.4e-06	36.2
WP_076002711.1\|597311_598442_+	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	8.8e-136	61.2
WP_048730083.1\|598446_598995_+	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	4.2e-83	83.1
WP_076002712.1\|599220_602124_+	hypothetical protein	A0A2K5B2B0	Erysipelothrix_phage	1.2e-229	46.3
WP_076002713.1\|602220_603012_+	phage antirepressor KilAC domain-containing protein	A0A1Q1PVU2	Staphylococcus_phage	4.6e-67	51.3
WP_076002714.1\|603004_603373_+	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	1.5e-28	57.8
WP_076003145.1\|603372_605586_+	DNA primase	A0A1B0RXC5	Streptococcus_phage	3.2e-142	39.1
WP_020760708.1\|605984_606320_+	hypothetical protein	NA	NA	NA	NA
WP_076002715.1\|606291_606582_+	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	1.2e-17	55.2
WP_076002716.1\|606562_608002_+	DEAD/DEAH box helicase	A0A2K5B273	Erysipelothrix_phage	5.7e-164	72.2
WP_020758832.1\|607961_608390_+	DUF1492 domain-containing protein	A0A2K5B275	Erysipelothrix_phage	1.2e-32	53.5
WP_076002717.1\|608533_610855_+	DUF1906 domain-containing protein	NA	NA	NA	NA
WP_032842297.1\|610927_611326_-	hypothetical protein	NA	NA	NA	NA
WP_032842295.1\|611399_611759_+	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	1.3e-32	52.1
WP_076002718.1\|611918_612470_+\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	9.4e-51	56.3
WP_076002719.1\|612481_613267_+	S-adenosylmethionine synthetase	NA	NA	NA	NA
WP_076002720.1\|613281_614517_+	site-specific DNA-methyltransferase	Q6DMV0	Streptococcus_phage	2.8e-135	59.7
WP_081264723.1\|614585_615266_+	virulence protein	A0A2K5B280	Erysipelothrix_phage	1.6e-39	39.5
WP_014554465.1\|615576_615861_+	hypothetical protein	NA	NA	NA	NA
WP_032839405.1\|616011_616236_+	hypothetical protein	A0A2K5B284	Erysipelothrix_phage	1.6e-12	44.6
WP_076002721.1\|616361_617954_+\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	2.0e-263	82.0
WP_076002722.1\|617963_619253_+\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	8.1e-170	70.4
WP_081378925.1\|619209_619944_+\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	1.5e-67	66.4
WP_076002723.1\|619946_621131_+\|capsid	phage major capsid protein	M1Q1R5	Streptococcus_phage	4.0e-99	49.1
WP_076002724.1\|621161_621440_+\|head,tail	phage gp6-like head-tail connector protein	A0A1X9I695	Streptococcus_phage	1.8e-10	38.5
WP_076002725.1\|621440_621773_+\|head	phage head closure protein	NA	NA	NA	NA
WP_016815970.1\|621769_622150_+	HK97 gp10 family phage protein	A0A2H4JAN0	uncultured_Caudovirales_phage	6.3e-14	36.1
WP_076002726.1\|622142_622481_+	hypothetical protein	A0A290GDX2	Caldibacillus_phage	3.7e-13	38.5
WP_014554473.1\|622464_623037_+\|tail	tail protein	A0A0U4JWV5	Exiguobacterium_phage	7.0e-41	45.0
WP_004117064.1\|623054_623420_+	hypothetical protein	A0A2H4JAG8	uncultured_Caudovirales_phage	9.1e-10	34.2
WP_155115407.1\|623651_624008_+	hypothetical protein	NA	NA	NA	NA
WP_076002727.1\|624100_626668_+	hypothetical protein	A0A2R4A056	Microbacterium_phage	2.9e-25	36.0
WP_004117051.1\|626670_627333_+	hypothetical protein	A0A0A7RWN1	Clostridium_phage	4.2e-05	26.3
WP_076002728.1\|627345_630153_+	hypothetical protein	H7BV46	unidentified_phage	1.8e-105	28.2
WP_076002729.1\|630360_630687_+	toxin	NA	NA	NA	NA
WP_076002730.1\|630855_631275_+\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	8.5e-44	62.2
WP_076002731.1\|631267_632188_+	1,4-beta-N-acetylmuramidase	A0A2K5B2A3	Erysipelothrix_phage	1.5e-53	42.3
WP_076002732.1\|632335_632746_+	helix-turn-helix domain-containing protein	A0A1X9I6V0	Streptococcus_phage	1.6e-18	39.6
WP_076002733.1\|632732_632945_+	hypothetical protein	NA	NA	NA	NA
WP_076002734.1\|633005_634601_+	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	1.2e-127	46.8
WP_076002735.1\|634570_634981_+	DNA recombinase	A0A2K5B2B3	Erysipelothrix_phage	2.8e-15	34.0
WP_076002736.1\|634982_636560_+	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	2.3e-150	53.1

DBSCAN-SWA_3

925606 : 1041315

Erysipelothrix_phage(40.0%)

holin,portal,capsid,tail,protease,tRNA,head,transposase,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076002825.1\|925606_928216_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A1S6UBG5	Serratia_phage	1.9e-133	41.5
WP_004111526.1\|928308_928992_-	DUF4190 domain-containing protein	NA	NA	NA	NA
WP_064621419.1\|929299_929440_-	hypothetical protein	NA	NA	NA	NA
WP_076003161.1\|930287_930485_+	helix-turn-helix transcriptional regulator	B3RH39	Bacillus_virus	1.9e-06	46.8
WP_048730107.1\|931573_932323_-	ABC transporter permease	NA	NA	NA	NA
WP_076002827.1\|932315_933206_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.5e-16	26.4
WP_048730104.1\|933207_934419_-	hypothetical protein	NA	NA	NA	NA
WP_076002828.1\|934420_935209_-	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
WP_080968710.1\|935218_936520_-	hypothetical protein	NA	NA	NA	NA
WP_076002829.1\|936503_937448_-	TOMM precursor leader peptide-binding protein	NA	NA	NA	NA
WP_076002831.1\|939836_939989_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_076002834.1\|941381_943544_+	hypothetical protein	NA	NA	NA	NA
WP_076002835.1\|943536_944166_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.1e-13	30.1
WP_081378931.1\|944787_945648_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.2e-41	38.7
WP_076002709.1\|946244_946877_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_016815920.1\|946936_947158_+	hypothetical protein	NA	NA	NA	NA
WP_076002836.1\|947169_947472_+	cell division protein ZapD	NA	NA	NA	NA
WP_076002837.1\|947464_948595_+	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	1.1e-135	61.2
WP_004117141.1\|948599_949148_+	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	6.4e-84	83.1
WP_076002838.1\|949374_952278_+	hypothetical protein	A0A2K5B2B0	Erysipelothrix_phage	8.3e-231	46.4
WP_076002713.1\|952374_953166_+	phage antirepressor KilAC domain-containing protein	A0A1Q1PVU2	Staphylococcus_phage	4.6e-67	51.3
WP_076002714.1\|953158_953527_+	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	1.5e-28	57.8
WP_076003145.1\|953526_955740_+	DNA primase	A0A1B0RXC5	Streptococcus_phage	3.2e-142	39.1
WP_020760708.1\|956138_956474_+	hypothetical protein	NA	NA	NA	NA
WP_076002715.1\|956445_956736_+	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	1.2e-17	55.2
WP_076002839.1\|956716_958156_+	DEAD/DEAH box helicase	A0A2K5B273	Erysipelothrix_phage	5.7e-164	72.2
WP_018645368.1\|958115_958544_+	DNA-directed RNA polymerase sigma-70 factor	A0A2K5B275	Erysipelothrix_phage	1.3e-34	54.9
WP_076002840.1\|958696_961135_+	DUF1906 domain-containing protein	NA	NA	NA	NA
WP_004117112.1\|961194_961608_-	hypothetical protein	NA	NA	NA	NA
WP_014554460.1\|961715_962075_+	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	5.8e-33	52.1
WP_076002841.1\|962235_962787_+\|terminase	terminase	A0A2K5B277	Erysipelothrix_phage	2.5e-51	56.9
WP_004125754.1\|962798_963302_+	hypothetical protein	A0A1W6JHR5	Lactococcus_phage	2.1e-25	48.7
WP_076002842.1\|963294_964080_+	S-adenosylmethionine synthetase	NA	NA	NA	NA
WP_076003163.1\|964094_965330_+	site-specific DNA-methyltransferase	Q6DMV0	Streptococcus_phage	9.0e-134	59.2
WP_081378932.1\|965398_966079_+	virulence protein	A0A2K5B280	Erysipelothrix_phage	2.1e-39	39.5
WP_076002844.1\|966389_966674_+	transcriptional regulator	NA	NA	NA	NA
WP_065189446.1\|966824_967049_+	hypothetical protein	A0A2K5B284	Erysipelothrix_phage	4.6e-12	44.6
WP_076002845.1\|967172_968765_+\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	1.6e-263	82.0
WP_076002846.1\|968776_970066_+\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	2.1e-170	70.7
WP_081378933.1\|970022_970757_+\|protease	Clp protease ClpP	Q6DMU1	Streptococcus_phage	1.9e-67	65.9
WP_076002847.1\|970759_971944_+\|capsid	phage major capsid protein	M1Q1R5	Streptococcus_phage	3.1e-99	49.1
WP_004125785.1\|971974_972253_+\|head,tail	phage gp6-like head-tail connector protein	A0A1X9I695	Streptococcus_phage	1.8e-10	38.5
WP_076002848.1\|972253_972586_+\|head	phage head closure protein	NA	NA	NA	NA
WP_016815970.1\|972582_972963_+	HK97 gp10 family phage protein	A0A2H4JAN0	uncultured_Caudovirales_phage	6.3e-14	36.1
WP_016815973.1\|972955_973294_+	hypothetical protein	A0A290GDX2	Caldibacillus_phage	6.2e-13	38.5
WP_076002849.1\|973277_973850_+\|tail	phage tail protein	A0A0U4JWV5	Exiguobacterium_phage	9.2e-41	45.0
WP_076002850.1\|973867_974233_+	hypothetical protein	A0A2H4JAG8	uncultured_Caudovirales_phage	2.6e-09	33.3
WP_032812428.1\|974521_975178_+	hypothetical protein	NA	NA	NA	NA
WP_016815980.1\|975170_975584_+	hypothetical protein	NA	NA	NA	NA
WP_076002851.1\|975669_978237_+\|tail	phage tail tape measure protein	A0A2R4A056	Microbacterium_phage	2.2e-25	36.0
WP_076002852.1\|978239_978902_+	hypothetical protein	A0A0A7RWN1	Clostridium_phage	2.2e-06	28.5
WP_076002853.1\|978914_981722_+	hypothetical protein	H7BV46	unidentified_phage	3.6e-106	28.6
WP_076002854.1\|981779_981962_+	hypothetical protein	NA	NA	NA	NA
WP_076002855.1\|981942_982296_+	toxin	NA	NA	NA	NA
WP_004118368.1\|982471_982891_+\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	3.8e-44	63.0
WP_076002856.1\|982883_983804_+	1,4-beta-N-acetylmuramidase	A0A2K5B2A3	Erysipelothrix_phage	9.9e-53	42.7
WP_076002857.1\|983953_984361_+	RNA polymerase subunit sigma-70	A0A1B0RXC6	Streptococcus_phage	2.8e-20	41.0
WP_076002858.1\|984347_984560_+	hypothetical protein	NA	NA	NA	NA
WP_076002859.1\|984620_986216_+	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	1.4e-126	46.8
WP_076002861.1\|986597_988175_+	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	5.7e-149	52.3
WP_119504415.1\|988680_990522_+	hypothetical protein	NA	NA	NA	NA
WP_155760801.1\|991115_991886_-	ABC transporter permease	NA	NA	NA	NA
WP_012913764.1\|991893_992619_-	lantibiotic ABC transporter permease	NA	NA	NA	NA
WP_012913763.1\|992615_993380_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.2e-39	37.2
WP_155760802.1\|993378_994221_+	response regulator	W8CYM9	Bacillus_phage	5.5e-34	36.2
WP_076002864.1\|994227_995631_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_004110960.1\|996734_997010_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_076002865.1\|997330_997765_+	GIY-YIG nuclease family protein	G9IA57	Pseudomonas_phage	5.6e-14	40.1
WP_032812851.1\|997785_998130_+	hypothetical protein	NA	NA	NA	NA
WP_004110957.1\|998506_998761_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_012914148.1\|999723_1000215_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_041160496.1\|1000389_1000569_+	hypothetical protein	NA	NA	NA	NA
WP_076002866.1\|1000918_1001353_+	cytidine deaminase	NA	NA	NA	NA
WP_076002868.1\|1002993_1003554_+	hypothetical protein	NA	NA	NA	NA
WP_155760803.1\|1003560_1004523_+	hypothetical protein	NA	NA	NA	NA
WP_012914152.1\|1004954_1005149_+	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	1.7e-18	74.2
WP_076002870.1\|1005347_1006748_+	hypothetical protein	NA	NA	NA	NA
WP_033888498.1\|1007155_1007755_+	hypothetical protein	NA	NA	NA	NA
WP_033888427.1\|1007921_1008221_-	hypothetical protein	NA	NA	NA	NA
WP_012914156.1\|1008409_1009270_+	hypothetical protein	NA	NA	NA	NA
WP_004109077.1\|1009727_1011029_+	hypothetical protein	NA	NA	NA	NA
WP_076002871.1\|1011807_1013145_+	ATP-binding protein	NA	NA	NA	NA
WP_076002872.1\|1013412_1013745_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_076002873.1\|1013741_1014056_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_076002874.1\|1014520_1015279_+	hypothetical protein	NA	NA	NA	NA
WP_076002875.1\|1015415_1018220_-	DNA methyltransferase	Q6NE04	Leptospira_phage	5.9e-141	35.0
WP_076002876.1\|1018745_1021010_+	ATPase	NA	NA	NA	NA
WP_004574239.1\|1022396_1023638_+	hydantoinase/carbamoylase family amidase	NA	NA	NA	NA
WP_081378934.1\|1023937_1025422_+	putative allantoin permease	NA	NA	NA	NA
WP_076002877.1\|1025423_1026800_+	allantoinase AllB	NA	NA	NA	NA
WP_004106666.1\|1026873_1027071_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_004108962.1\|1027071_1027695_+	sulfur carrier protein ThiS adenylyltransferase ThiF	NA	NA	NA	NA
WP_004108959.1\|1027684_1028452_+	thiazole synthase	NA	NA	NA	NA
WP_076003165.1\|1028872_1032316_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_076002878.1\|1032449_1035338_+	NAD-dependent DNA ligase LigA	A0A0A8J9A9	Ralstonia_phage	3.3e-78	38.9
WP_012914185.1\|1035341_1036469_+	Mrp/NBP35 family ATP-binding protein	NA	NA	NA	NA
WP_076002879.1\|1036562_1037933_-	DUF349 domain-containing protein	NA	NA	NA	NA
WP_004108947.1\|1038029_1039430_+\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	8.9e-29	28.6
WP_012914188.1\|1039518_1041315_+\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	6.1e-06	34.7

DBSCAN-SWA_4

1365289 : 1377436

Propionibacterium_phage(50.0%)

capsid,terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016797643.1\|1365289_1365658_+	HNH endonuclease	V5R8P9	Arthrobacter_phage	3.3e-15	51.6
WP_076002999.1\|1365806_1366286_+	hypothetical protein	NA	NA	NA	NA
WP_081378945.1\|1366254_1367691_+\|terminase	terminase	A0A1D8EU11	Propionibacterium_phage	2.1e-97	39.5
WP_076003001.1\|1367687_1369181_+\|portal	phage portal protein	A0A1D8EU66	Propionibacterium_phage	1.2e-52	30.3
WP_081378946.1\|1369161_1370196_+	EndoU domain-containing protein	A0A1D8ETP7	Propionibacterium_phage	8.3e-24	37.5
WP_076003002.1\|1370195_1370492_+	hypothetical protein	NA	NA	NA	NA
WP_076003003.1\|1370591_1371053_+	hypothetical protein	NA	NA	NA	NA
WP_076003004.1\|1371083_1371998_+\|capsid	phage major capsid protein	R4JKV8	Mycobacterium_phage	1.3e-84	54.7
WP_076003005.1\|1372013_1372400_+	hypothetical protein	A0A1D8ETI1	Propionibacterium_phage	1.6e-09	37.7
WP_076003006.1\|1372389_1372740_+	hypothetical protein	NA	NA	NA	NA
WP_016809870.1\|1372741_1373038_+	hypothetical protein	NA	NA	NA	NA
WP_076003007.1\|1373034_1373400_+	hypothetical protein	NA	NA	NA	NA
WP_076003008.1\|1373411_1374005_+	hypothetical protein	M1PKG8	Streptococcus_phage	1.5e-17	32.8
WP_016798162.1\|1374111_1374429_+	hypothetical protein	NA	NA	NA	NA
WP_076003009.1\|1374431_1374818_+	hypothetical protein	NA	NA	NA	NA
WP_076003010.1\|1374817_1377436_+	tape measure protein	A0A1P8BLF5	Lactococcus_phage	1.1e-67	41.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019058

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection