CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP019240	Rhodoferax antarcticus strain DSMZ24876 chromosome, complete genome	7 crisprs	cas3,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,c2c9_V-U4,DEDDh,DinG,csx1,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,RT,csa3,WYL	24	8
NZ_CP019241	Rhodoferax antarcticus strain DSMZ24876 plasmid unnamed1	0 crisprs	NA	0	0
NZ_CP019242	Rhodoferax antarcticus strain DSMZ24876 plasmid unnamed2	0 crisprs	RT,WYL	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019240_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019240_1

286342-286438

Orphan

Consensus_repeat	Method
GCCGTCTACTGCGCGGTGTGTTGCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019240_1

>merge|NZ_CP019240|1|286342-286438|CRISPRCasFinder
GCCGTCTACTGCGCGGTGTGTTGCGGCCAGTAAAAAACTGCACAGCCCCCCAACAGCATGCGGGCACTGTGCCGTCTACTGCGTGGTGTGTTGCGGC

>NZ_CP019240|1|1|286342-286438|CRISPRCasFinder
GCCGTCTACTGCGCGGTGTGTTGCGGC	CAGTAAAAAACTGCACAGCCCCCCAACAGCATGCGGGCACTGT
GCCGTCTACTGCGTGGTGTGTTGCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019240.1\|WP_075585804.1\|279196_279538_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239242
NZ_CP019240.1\|WP_075585803.1\|277016_278984_+\|DUF839-domain-containing-protein	unknown	unknown	gnl\|CDD\|225752
NZ_CP019240.1\|WP_075585906.1\|290149_290842_+\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NZ_CP019240.1\|WP_075585818.1\|295320_298824_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|182330
NZ_CP019240.1\|WP_075585802.1\|276128_276896_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP019240.1\|WP_173861792.1\|288623_289415_-\|DTW-domain-containing-protein	unknown	unknown	gnl\|CDD\|225690
NZ_CP019240.1\|WP_075585810.1\|284924_286262_+\|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ	unknown	unknown	gnl\|CDD\|236623
NZ_CP019240.1\|WP_139313318.1\|289824_290004_+\|superoxide-dismutase-family-protein	unknown	unknown	gnl\|CDD\|376292
NZ_CP019240.1\|WP_075585812.1\|287269_288145_-\|serine-protein-kinase-RIO	unknown	unknown	gnl\|CDD\|270696
NZ_CP019240.1\|WP_075585808.1\|283035_284037_-\|SLAC1-anion-channel-family-protein	unknown	unknown	gnl\|CDD\|187763
NZ_CP019240.1\|WP_075585817.1\|294088_295324_+\|exonuclease-subunit-SbcD	unknown	unknown	gnl\|CDD\|182871
NZ_CP019240.1\|WP_075585809.1\|284159_284708_-\|DUF2062-domain-containing-protein	unknown	unknown	gnl\|CDD\|378263
NZ_CP019240.1\|WP_075585806.1\|280439_281438_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NZ_CP019240.1\|WP_075585813.1\|288337_288586_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585805.1\|279544_280033_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239242
NZ_CP019240.1\|WP_075585904.1\|275213_276044_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225717
NZ_CP019240.1\|WP_075585815.1\|290853_292050_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP019240.1\|WP_075585816.1\|292563_293223_+\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|223740
NZ_CP019240.1\|WP_075585807.1\|281513_282824_-\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|234824
NZ_CP019240.1\|WP_075585819.1\|298892_299852_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372012

Protein	Function_ID	Function_description	E-value
NZ_CP019240.1\|WP_075585804.1\|279196_279538_-\|hypothetical-protein	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	1.06174e-24
NZ_CP019240.1\|WP_075585803.1\|277016_278984_+\|DUF839-domain-containing-protein	gnl\|CDD\|225752	COG3211, PhoX, Predicted phosphatase [General function prediction only].	2.56151e-09
NZ_CP019240.1\|WP_075585906.1\|290149_290842_+\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	2.08619e-55
NZ_CP019240.1\|WP_075585818.1\|295320_298824_+\|AAA-family-ATPase	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0
NZ_CP019240.1\|WP_075585802.1\|276128_276896_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.61567e-45
NZ_CP019240.1\|WP_173861792.1\|288623_289415_-\|DTW-domain-containing-protein	gnl\|CDD\|225690	COG3148, COG3148, Uncharacterized conserved protein [Function unknown].	4.09591e-88
NZ_CP019240.1\|WP_075585810.1\|284924_286262_+\|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ	gnl\|CDD\|236623	PRK09775, PRK09775, type II toxin-antitoxin system HipA family toxin YjjJ.	1.77046e-174
NZ_CP019240.1\|WP_139313318.1\|289824_290004_+\|superoxide-dismutase-family-protein	gnl\|CDD\|376292	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC). superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD1 gene cause familial amyotrophic lateral sclerosis (Lou Gehrig's disease). Structure is an eight-stranded beta sandwich, similar to the immunoglobulin fold.	7.45773e-07
NZ_CP019240.1\|WP_075585812.1\|287269_288145_-\|serine-protein-kinase-RIO	gnl\|CDD\|270696	cd05145, RIO1_like, Catalytic domain of the atypical protein serine kinases, RIO1 and RIO3 kinases and similar proteins. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. Both RIO1 and RIO3 are associated with precursors of 40S ribosomal subunits, just like RIO2. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and chromosome maintenance. Although depletion of either RIO1 and RIO2 results in similar effects, the two kinases are not fully interchangeable. The specific function of RIO3 is unknown. RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).	1.01614e-65
NZ_CP019240.1\|WP_075585808.1\|283035_284037_-\|SLAC1-anion-channel-family-protein	gnl\|CDD\|187763	cd09323, TDT_SLAC1_like, Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes SLAC1 (Slow Anion Channel-Associated 1). SLAC1 (Slow Anion Channel-Associated 1) is a plasma membrane protein, preferentially expressed in guard cells, which encodes a distant homolog of fungal and bacterial dicarboxylate/malic acid transport proteins. It is essential for stomatal closure in response to carbon dioxide, abscisic acid, ozone, light/dark transitions, humidity change, calcium ions, hydrogen peroxide and nitric oxide. In the Arabidopsis genome, SLAC1 is part of a gene family with five members and encodes a membrane protein that has ten putative transmembrane domains flanked by large N- and C-terminal domains. Mutations in SLAC1 impair slow (S-type) anion channel currents that are activated by cytosolic calcium ions and abscisic acid, but do not affect rapid (R-type) anion channel currents or calcium ion channel function.	6.96724e-110
NZ_CP019240.1\|WP_075585817.1\|294088_295324_+\|exonuclease-subunit-SbcD	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0
NZ_CP019240.1\|WP_075585809.1\|284159_284708_-\|DUF2062-domain-containing-protein	gnl\|CDD\|378263	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062). This domain, found in various prokaryotic proteins, has no known function.	1.00325e-35
NZ_CP019240.1\|WP_075585806.1\|280439_281438_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	0
NZ_CP019240.1\|WP_075585805.1\|279544_280033_-\|hypothetical-protein	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	1.38029e-68
NZ_CP019240.1\|WP_075585904.1\|275213_276044_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225717	COG3176, COG3176, Putative hemolysin [General function prediction only].	6.89015e-56
NZ_CP019240.1\|WP_075585815.1\|290853_292050_-\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	6.36259e-51
NZ_CP019240.1\|WP_075585816.1\|292563_293223_+\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	3.39634e-15
NZ_CP019240.1\|WP_075585807.1\|281513_282824_-\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|234824	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP019240.1\|WP_075585819.1\|298892_299852_+\|hypothetical-protein	gnl\|CDD\|372012	pfam12281, NTP_transf_8, Nucleotidyltransferase. This is a family of bacterial proteins that have a nucleotidyltransferase fold. The fold-prediction is backed up by conservation of three highly characteristic sequence motifs found in all other nucleotidyl transferases: i) pDhDhhh(h/p), where p is a polar residue and h is a hydrophobic residue; ii) upstream of the first, a GG/S; iii) a conserved D/E in a hydrophobic surround. In the classification of nucleotidyltransferases proposed in this is a group XVIII NTP-transferase. Many of these sequences were classified in the COG database as COG5397. The exact function is not known.	5.74894e-33

>NZ_CP019240.1|WP_075585810.1|284924_286262_+|type-II-toxin-antitoxin-system-HipA-family-toxin-YjjJ
MTTATDLTQQALQALRRQGSVLTSAELQALLGVSQPTVSRALSALIQSGQVLKVGAARSQRYVLARNVPGVGREVQVMRVNALGQPAPFARLVPLEGGAFWVDEADGVSAKHDGLPWFLDDMRPQGFMGRTFAHAHPELQLGSDPRHWSDDDVLRALTQFGDDLPGNLILGEAAFARFHTLPERASRVDSAADYPRLADEAMQGTHPGSSAGGEQPKFCTISAGRAVLVKFSPAGDSAVDQRTRDLLVCEHLALQTLAEAGISAARTQIHSGEGRLFLESERFDRVAATPGPAGQLGRIGMVSLQVYDAKYVGEMDNWAATANRMVARKLLNPTDARTLRLLEAYGQLIANTDRHYGNISLLIQDDDWVLSPTYDMLPMLYAPVAGELVARDFAARPLQPTAATLPEWQQARALAASFWQTAALDARVSDGFRQIAVQNLSHIGL
>NZ_CP019240.1|WP_075585809.1|284159_284708_-|DUF2062-domain-containing-protein
MPKPGKYFSRLPTPEQILGNRWLAWLRPWLKEPKLWHWSRRGVAMGVALGVFFGLLIPVAQIPLSVAAAIVLRANVPTAVASTLVSNPVTFGPIYYGAYRLGVWVTGSKERPKTINLANPQIPVVDEKISAWQRINSLGKPLLVGLSITAVLMGLLTYGTISLVWRWRVWAKRRSRAHRKIP
>NZ_CP019240.1|WP_075585808.1|283035_284037_-|SLAC1-anion-channel-family-protein
MNATTAATTPAGAPAATHGRLAHMPISMFSIVMGLAGTTIALEKAELLWAWSVSPSAVMLALTALVFVAISLAYLAKFVLHRQHVIAEFNHPIRLSFFPTISIGMLLLAIASMSHHPGVSLYLWAVGSAVQLLFTLAILSNWMHHEKFQVQHSNPAWFIPIVGNILVPIAGVPLGYPEVSWFYFSIGLMMWTPLLAVLFNRFFFHPMIPSKLLPTLFILIAPPAVGFISWVKLHNGVVDDTARIFYYFALFITLLLIVQAKYFIKVSFALPWWAYTFPVAALTIATSVMLEKVGGSFFAMLFPLLLSVLVVLVSVVCVRTVIAMMRGEICVPE
>NZ_CP019240.1|WP_075585807.1|281513_282824_-|glucose-1-phosphate-adenylyltransferase
MTNSDASSSSAAIQNDPRLISNLTRNTFAMVLAGGRGSRLRELTDWRSKPAVPFGGKFRIIDFTLSNCVNSGVRRVGVATQYKSQSLIRHLQQGWSFLDGRLGEFIEIMPAQQQVDESHWYQGTADAVFQNLREIRHTNPQYVLILSGDHIYRMDYGRLLLAHVESGADVTVACIEAPLEEAKGFGVMAVRDDGRIVEFQEKPEKPKPTPNNPDMALASMGIYVFNARFLFEQLARDADDPTSSHDFGKDIIPHCVERHLAFAQNFADSCVQEPGKPAYWRDVGTLDAYWEANMDLVQVTPELNLYDQNWPIWTWQEQRPPAKFVFDDDTRRGSAVDSTVSGGCIISGASVRHSMLFSGVQVHSYSLVEDSVVLPNVQIERNCVVKKCILDRDCHLPEGTQIGVNPEEDRKRFHVTDSGITLVTTAMLGQKIEMIG
>NZ_CP019240.1|WP_075585806.1|280439_281438_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MTIKIGINGFGRIGRNVLRSALQNFSDIEVVAVNDLLEPDYLAYMLKYDSVHGRFKGEVSVDGNTLIVNGKNIRLTQERDPANLKWDEVGADIVIECTGIFLDKAGGEKHLAAGAKKVIFSAPSKDDTPMFVFGVNDKTYAGQAIISNASCTTNCLAPLAKVIHDKFGIKRGLMTTVHAATATQKTVDGPSNKDWRGGRGILENIIPSSTGAAKAVGKVIPDLNKKLTGMSFRVPISDVSVVDLTVELNTATTMEEICAEIKAQSEGAMKGVLGYTDEKVVATDFRGETRTSVFDADASIALDGTFVKLVAWYDNEWGYSTKCLDMVRVVAK
>NZ_CP019240.1|WP_075585805.1|279544_280033_-|hypothetical-protein
MLPQGRITPRCLGLWNDTTEAARADQLHLARALARHTAGCLQLVHTGRKASSAVPWEGGQLLCPEQGRWQTVGPSALPQLPSEAPPLEISAQKLVRNREAFVRAAQRAQRMGVDALELHRAHGYLLHQFLSPLANQRSVAYGGSFENRIRFPLEVFAAVRAA
>NZ_CP019240.1|WP_075585804.1|279196_279538_-|hypothetical-protein
MLGLRLSASLGAQGGWDLAQSEVFFQRLKAPGFDFIHFSSSGVSPKQKIALGANYQVPSARAIRASSAMVTTAVGLITEPALAGACRPLSVQACRRWRNSFIHFRPQPKFVAG
>NZ_CP019240.1|WP_075585803.1|277016_278984_+|DUF839-domain-containing-protein
MSQATPSSRRQALKIFASLPMLPLGALSVSSLMAGCATPAGGAASAAAGTGSPFASASFVGMAAPSLANPAAMATTLVNSSLQVKLQDGSTRAFKLAYKPFFITGEQVPDGKGGTLLAGGYVNILNKPIIDKSVSGKERQFFSDCPDGTSLLQLANPKVPGIKGKAVFAVVQFEYANADQSGADAYGTLPSPIAVLTLDQDQATGALSLVKYHSVNTSEAQGMWITCGSSLSPWNTHLSSEEYEPDAQFIADNKQFKAFSKNLFGDEGVANPYHYGHLPEVTVNPDGTGSLVKHFCLGRISHELVQVMPDNRTVLMGDDATNSGLFVFVADKEKSLSAGTLYVAKLGTGFSINPADVGAKLSWIKLGHATSAEIEKMANTLKPSDIMTVLKADPLDASFTKVFHSGAANWIKVKPGMEKAAAFLETHRYAYLMGGSMGFSKMEGTTVNIKDKVAYSALQNMQDSMVKTGKGWNAASGIALDKALIAGGIMASALNGGQSDQTGAAIKSEWMPTAMRALLVGEDIAPDALGNLANPDKVSNPDNLKFSEKLRTLFIGEDSGTHVNNFVWAYNVDTKQLSRLMSMPSGAEATGLGVVDDMNGWMYITSNFQHPGDWQPKLHGKVQATLDPLVRANYNNRFGAAVGYLTADHTGVKLG
>NZ_CP019240.1|WP_075585802.1|276128_276896_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MTHRFNTAQATWKLVRVGSHLALGWWTVKRIFPRLDWHQKQQQKQAWALTLLALLAIKLEVSGEPAQRGPVLLVANHISWLDIVVLMATCPCRFVAKAEVSHWPLLGTLATGLGTLFVTRESPRDAVRVVHQMAEHLQAGDLLAIFPEGTTSQGTQLLPFHANLFQAAVSAGAPVQPVALQFIDAASGEPSLAPCYINDDSLLQSIWRTLTVPTLCAAVRFGEPQNVLGRDRRALARDVRGAVDALRQPAAAPLI
>NZ_CP019240.1|WP_075585904.1|275213_276044_+|GNAT-family-N-acetyltransferase
MKELPNPTFALSPVSLPRGSLHRPQALENVASVERGGLQVTWARHADEVRQAQRLRYQVFAEEMGARLSTTVPGHDVDLFDNYCEHLLVRDVASQEVVGTYRVLTPAQAKRVGSTYSDTEFDLVRLRPLRERMVELGRSCVHPDYRHGGVIMALWGALAEFMVRNQLDTMVGCASIPMLHNGVVSGDVAASIWRQLQATHLAPIEFHVRPRLPLPVDELDSSLAVEPPALIKGYLRLGAKVLGAPAWDPDFNTADLPMLMRIHDLPARYRKHFLGA
>NZ_CP019240.1|WP_075585812.1|287269_288145_-|serine-protein-kinase-RIO
MKPPARLQPLIEEGLIDSVVRQLMSGKEAMVFVVRCGIETRCAKIYKEATKRSFRQAVDYTENRKVKNSRSARAMAKGSKFGRQEQEAAWQSAEVDALYRLADAGVRVPQPYNFCDGVLLMELVTDAHGDAAPRLNDVAFTPEQALQHHATLVKEVVRMLGAGVVHGDLSEFNILLAHAPGVDGADGVDEPVIIDLPQAVDAAGNNHAQRMLLRDVANLRDFFGQFAPTLLATQFGPEIWSLYQAGLLSTDTVLTGRFERSPASVDTQAVLREIDDALAEEAARKLRMASA
>NZ_CP019240.1|WP_075585813.1|288337_288586_-|hypothetical-protein
MSPNPNPPTDPQTTPLCEPCAAVQQNWRRAPGHAELVQGANRKETRGDKAVTITRYRCDHCGTVWDYENNKANQHAGWSVVA
>NZ_CP019240.1|WP_173861792.1|288623_289415_-|DTW-domain-containing-protein
MVINPLSPMPHAPHAVFRLRTERLARAVKPFRARGGPAERCPSCRVMHSHCFCGLRPSVPTLAGMCLLMADIEPLKPSNTGWLIADVVADTFAFSWARTSVDPRLLTLLADPQWQPYVVFPGEYVAPERVLTALLPEMAAAGQAPKRPLFVLLDATWAEAGKMFRKSPYLNHLPVLSLHPEQISNYRLRRSSRSDHFCTSEVGALCLALAGEPHAADMLNTYLEVFTHHYLKAKNQQPLDLQDAAHQRLSSLSSLSGQRQSSH
>NZ_CP019240.1|WP_139313318.1|289824_290004_+|superoxide-dismutase-family-protein
MEPTKGNSATGLLTFAKHGDKVRVFGELRGFVPNTEHGFHSHEKGDSSSGDGLSEARGV
>NZ_CP019240.1|WP_075585906.1|290149_290842_+|dienelactone-hydrolase-family-protein
MGHMVNFQRPDGKSVQGYLAESARPNNPPAVVVIQEWWGLNAQICGVADRLAAAGYQALVPDLYRGKATVQAEEASHLMTGLDFGDAASQDIRGAVQFLKELAPKVGLTGFCMGGALTLLSVAETPELDAAVVWYGCPPLEHLDASKIRIPLMGHWGTQDESFTIDLVDELQEKLTAAGVDYDFYRYLARHGFANETAVGPGRIPTTQYDPVWAQQAWDRTLRFFGRHLG
>NZ_CP019240.1|WP_075585815.1|290853_292050_-|Fic-family-protein
MSSKTTPTPPRYLWQHPAWPVISFDTDALMQDLSHARLEQGKLLGLLEAIGLESGQEAARELWVQEAMATAAIEGEKLDQDAVRSSLAHRLGLAGLPTTDRHVDGLVQVMADATAQYQAPLTQERLCLWQAALFPGGSVNLRRVAVGRYRDHADAMQIVSGRLGREVVHYVAPPSAQVPQEMAQFLAWFECTHPAADAAPRLHGLVRAALAHLWFETIHPFEDGNGRLGRAIVDMALAQDMGAAVRVFGIARQMMTTRAAYDDALNQAQQSTAGTGLDVTPWVQWFVQACAQGCITSQAVVRQALEKAEFRQRAAASGVNARQTKVLDRLLQAGNRTLGGGFLGGMSSDKYCKLTGSSKATATRDLVDLAAKGLLRIEGVGKATRYAIAIDQWTQAPV
>NZ_CP019240.1|WP_075585816.1|292563_293223_+|mechanosensitive-ion-channel-family-protein
MRRSLTTYLPEWTRDWLEIIVPGLQILLILLVAWLLQYLLRRVLNRVRQHYELPLELMLPLKALVRWTIMLAALLLVLERVGVSATVLWTAFTGFATVGAVAFFAAWSVLSNLFCAFLIYTVRPFRLGDSIELLDVAEKPGARGRVVDINMLYTSLQDSDSPTPGTLLQIPNTLIFQRVVRRWKGGQQPPSRAVPPESAAPAARSTTVIGGSPAAEDAA
>NZ_CP019240.1|WP_075585817.1|294088_295324_+|exonuclease-subunit-SbcD
MRILHTSDWHLGQHFMGKSRQAEHQALIDWLLVQVEAHAVGAVLIAGDIFDTGAPPSYARELYSHLVVGLHRAGVALLLLGGNHDSVATLRESRSLLAFLSTTVVADVNNPADQLVVLPRRGTSAEPGCIVCAVPFIRARDVLQSQAGQSAQEKQQSMQVAIQAYYQAVYAAGQARQAELQRELGRSVPLIATGHLTTVGASSNESVREIYVGSLDAFPTAAFPPADYIALGHIHKPQKVGGVEHIRYCGSPIALGFDEARQQKEMLLVELDERGLVSVTALPVPRFQSLVSVSANLATLAGAIATAAAKGTFEKPVWLEVTVAEDDYLSDLPARISEMTQGLPVEVLRVRRQRANTAGTLDGDILETLDELSPEDVFARRLAQEDLPPAMQEALGQRFREVVKSITEGAV
>NZ_CP019240.1|WP_075585818.1|295320_298824_+|AAA-family-ATPase
MKILKLRLKNLNSLKGEWAIDFTQPPFTENSLFAITGPTGAGKSTLLDAICLALYHETPRLKSVSKSANDIMTRHTADCLAEVEFEVQGDVYRAFWSQRRARDKVDGELQNPKVELASIDPATGLGAILSSQSTDKLKRTADITGLDFARFTRSMLLAQGGFAAFLNASANDRAELLEELTGTEIYGEISCNVFEQARQAKQQLDQLKAHAAGVELLPADQRAAMQADIDQWALELGAVQKTRDTAQAQRQWHLNLAQSAQELTASQTAKNNAVSNLQSAAPELQRLATSEPAKVLQAPHKAMQQAQATCMTSETLLATLQEQHQQASAAHHHHHLRAHTLANRMAAAAQTQLGQLEADHQRQLDYCTGHAQHAQLGERLGSWRQQFEQRHKLKTSAAGQQAALQQLQTEIAQCGDKITRQSALLETAVQAQATSAAALQASQTDQTQRLGGQTISALRQRWQAAQGQVTSWEKIGQCGQQRCDLVEQQTALVAEIQHGEATVKDQQAKRSQWRDQFKALKEQVADKQKLLDQERRIQSLDQHRQALQPGAACPLCGATAHPAIAAYQALDVSATQAALQHKQAELEALENQGQAMTATLEGSKAKLAERFGQQAKVAQHMGQWQAQWAAAISQVSANPALTLDDWHSAEQLLASQQAATNTLAQLANDLQTAEAGEQSVQLALTTSSQSAQALQAATFQLELLQQANQAAQARQATLALDIKATQADAASLEASMQAALAEAGYTTPSDAAPWLAAREGEWQHWRSTNQQMQALTHAITRQQAQRDAAQAQANVWAQRWAGLQAATGQSAIGIANAIAFTAQDEVDETDLAATFATSVKAIASLSNTLAALAGRQAQAQSTWAQQATAQDAAVTAWNTALLESAFADVAAFEAALLLEPERQRLAALRDALLIAQERASALHQAALEKHSQLQTQAMTAQTLEELEASLAELEEQRSAANEKIGAHRALLANDAKLRINQQALFEEIASQTAESDLWQRLDGLIGSAKGDKFRKFAQGLTLDHLLQLANRHLARLHGRYLLRRKSTGELELEIVDAWQGDVARDTRTLSGGEGFLVSLALALALSDLVSHKTSIDSLFLDEGFGSLDGDTLEIALTALDSLNASGKMIGIISHVQAMKERIPAQIRVEKGGGIGHSRLVVSCGSEP
>NZ_CP019240.1|WP_075585819.1|298892_299852_+|hypothetical-protein
MQELSATITHQYTDAVAVFDALAQATLEAAQVRGGMYWHAGPASSPESKYLVRTTPAGAETSLGARTAETQAIYDKFTQKKQASAERLAGLKAALDQQQRLNRALRVGRVDPLVVALLNRLASTQLSDHFRVVCTHALYAYEAAAGVRLDADALATRDIDLLWDTRKRIIFSTQLARVDSFMLGLLKKVDASFRMRQSQKYTAVNKDGFEVDIIRREQMDDDPHPIKLSDEDDDFWVVQARRANVLLNAPGFFAVIVATNGTNGTNGTMARMNTVHPATYVAFKRWMAGLADRDALKRRRDVLQADAVQILLNEYLPQV

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Crispr_ID: NZ_CP019240_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019240_2

372129-377882

TypeI

I-C

Consensus_repeat	Method
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	PILER-CR
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CRISPRCasFinder
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CRT
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	PILER-CR

80 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP019240_2

>merge|NZ_CP019240|2|372129-377882|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAAGCCGAAAGCGTTTGCAGCCGCCTCGACAGCCAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAACAGCCATACCGCCGAGGGGGCCACCGAGGGCCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGTTAGTTCTGCTCTCAAGGTTTCTCCTTATCTTGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTCTACAACAGGTTTATCTACAACAGGTTTATCTAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCGGGCATGGGTGTGGAGGCTCCTGGGTGTGAGGGAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCAACCCGGACATTCGTTATGGTCGGACGGGCGCTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACACGTCAGTCGCTGGCGTTGATTCGACGCTGGTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCATTTAACGCAGAGTTGAGCGCCCCATAGGGTGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCCTGCTCAGTAACAGCGTAAACCCCCTCATATCCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACCGCATAAGTTTGACAAGTTCGATAGCTCAAAGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGTCGCCGCTATATTCGGTGTCCATCAGCAGTGGTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCAATTCGAGTTCGTCGGCCCGTTGTTCCAATTGGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCAGCTGCGTGCTGGGCTTCGGAGATTGTTTCGCCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAACTGCTCCGGCGGTTGTCAGCCTGAATTGCACCTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGATGTTAAGGGGTCAATGATGCGCTGCGCTTCACAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAACATGGTCCGGTTCTTGTGGCGCTCCCCCAGCTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACGTTACACCTGTAATTACAGTTAGTTTGATCAAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTCAATTTAACGGCTTCTCTTGTCGGTCGCGTGCTTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCACGTTAACGGGCGGGCGGTGTGTCTGTAATGCGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGGCAATGCCGCTGCCCCAGGTGGTGACGTTGGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACCTTGGTAGAGGTGGCGCGCGACATCGCTCAGTAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGTGAAGGGTGCCAGCTACCAGGCGCGCCTGAAGAGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGCGACACACACTTTGACATTGGCAACGGTAAGGAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGTTTCGTCATACCCGCCGTGTTGTGGGGTGCCAGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTTCACCAAGCGCCTGAACGTCTGGGTGAATGGTGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAACGCGGGTGCCGCCTATTTCCCCAGCCTTGAAGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGCAGTACGGTGGATCGCTTTCGCGGGGCGTATGGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTGCAGCCTTACCGCATAGGACTGGGAGTTTAGATAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACATCAAGATCACGCGCCAGCTGGCGATGGACAACGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACCGGCTACGCCAGCGCGTTCAACCGCGTGGACAGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCGCTCAAGGCTCGACACTACATATTGCGACTGGCAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGTTGTCTGCATCGCCCGAGCGTCTTTGCGGTCGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACCATCAACCGGCGTTTGAGTCGGTTTTTTTACAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGACTCCATGCCCGATGCCGAGTTCAGAAAGCTGATAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCCAAAATACCAACGGTCATGGGCGGCAATGGCACAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGCATTAGCTGGGCGTTGGCCGCAATCTGGCTGGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACGATGAATACAGCCATTTTGCCGACGCTTTTCGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACCAAGCACGCCGACGAAGGTGTACACGTAAGCGCAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTGATTGGTGAGCAGGCTTGGAAGCAGAGTCATGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACGATGAATACAGCCATTTTGCCGACGCTTTTCGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGCATTCGCACACTCGTTGCGGAGGCGTCAGCAGGTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGGCACTACATCGATGCGCTGCTGAATGCACTGATAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACATCCTGGCCATGGATGATGCGTTGGCTGCTACCAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGTCGCATGATGGGTGTCGAGGGCTCAAAATCCGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACTTGTGTAGCCAGGTTGTCTGGTAGACAGCGGGAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGGCGTTACAGAAAACCAATCTTTGGGCGGGGCATCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTCAATCGTCTTGGAGTACTAACATGATGCATTACTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGTCCGTATGCCATCTGCCCCACCAGGCATCCGCAAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACATTCGGCTCGCAGGAGTGAGCAAAAGGCAATCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCCTGTGCTGACCAGTGCGGTGGTGGCGACTACTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACGCCCTTGCGCCAATGATGGGCCATTGCGCCGAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCAGATACCGCCCCTCGCTGATCGCAATCGCCGGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGGCGGGGGGACATTCAAGGCAAGATGTGCGGGTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCAGCTTTCCGGCGCGCCTGCCACCGCCATATCTCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACCCGGCGCTCACTGTGGCGGCGCACGGTGCCTTCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCGCCGGAACAATGCCCCGGTCGAGCAGCGCCTCGAGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGAAAACACCCAGTAGCCGCCCGGCTGACGCAACAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCCGTCCTACGCCTTGACCAATAACAACGCCAATATAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACCACGTCTGCCCGCACTGCCACGGCAAAATCACAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCATGTAGTTCTTGCCGCCCACACACCGCCGAGCACGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTCCTTGTAATTTTGGTAAGTGGATAGGTTGACCCCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGGCAGGGCCAACTGCGCGCCGTGGCGGCCGGTGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACATCTGGATGCTCCTTTATTGTCGGTTTCGGTCAAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACATAATGCCGCCGCCTGCACAAACAGCGCATCAGTGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACATGGCATCGCTCTCGACATGGGACGTATTTGGGCAAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACGCTGGATTTGTTTGAGGAAGCACCGGCCACCAGAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAACTGCATGGCCGAAGGCCATCCAGCATTGAGGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACGGCCTTCGGGCTGTTTTGCCCCCCAAACCTTGCTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTTCGTTGCCATTCCTTAACCTCCAAGTAAGGCGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTTGTTCACGAACGCCGTGGCGTAAGGGGAAGCGCTGGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAAACCAAATCAACCTCTAGACCTTGAGGAACAATGGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCAACACACCATGACACCAGCGCAAGCCCTGGACAGGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTTGCCACTGCGTTGTCGCGTTGCGGGGGTCGTACGGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGGCCAAACACCAGCGCATCGTCCCAGCCGCGCATGGTTCGCCCGCCAGCAATGGAGGGCGCGGATTAAAACACCAGCGCCGTGGCAGACTCAAGAAGCGCGCTACGGGGGGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACATCGCGAAGCCGTTGTAATAAACAGTGCGACCCTGGTTCGCCCGCCAGCAATGGCGGGCGGTGATTGAAAAACCCTGACGCTGGCTGACGGGCTGCCCGTTGAGGCGGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCGCATTACATCAAGTGCGAGCCGTCGCTGTTTCACGGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAATTTAAAACCCTTGGAGTAAATGCACCATGACCCACGGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACCACCTATGACGTGCCCATTGGCAAGTGGGTTGACGGGTTCGCCCGCCAGCAATGCTCTAAACCAGTTTCTTC

>NZ_CP019240|2|1|372129-374877|PILER-CR
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AAGCCGAAAGCGTTTGCAGCCGCCTCGACAGCCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACAGCCATACCGCCGAGGGGGCCACCGAGGGCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTAGTTCTGCTCTCAAGGTTTCTCCTTATCTTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCTACAACAGGTTTATCTACAACAGGTTTATCTA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGGGCATGGGTGTGGAGGCTCCTGGGTGTGAGGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAACCCGGACATTCGTTATGGTCGGACGGGCGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACACGTCAGTCGCTGGCGTTGATTCGACGCTGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CATTTAACGCAGAGTTGAGCGCCCCATAGGGTGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCTGCTCAGTAACAGCGTAAACCCCCTCATATCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCGCATAAGTTTGACAAGTTCGATAGCTCAAAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTCGCCGCTATATTCGGTGTCCATCAGCAGTGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAATTCGAGTTCGTCGGCCCGTTGTTCCAATTGG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGCTGCGTGCTGGGCTTCGGAGATTGTTTCGCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACTGCTCCGGCGGTTGTCAGCCTGAATTGCACCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GATGTTAAGGGGTCAATGATGCGCTGCGCTTCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACATGGTCCGGTTCTTGTGGCGCTCCCCCAGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGTTACACCTGTAATTACAGTTAGTTTGATCAA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCAATTTAACGGCTTCTCTTGTCGGTCGCGTGCTT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CACGTTAACGGGCGGGCGGTGTGTCTGTAATGCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCAATGCCGCTGCCCCAGGTGGTGACGTTGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCTTGGTAGAGGTGGCGCGCGACATCGCTCAGTA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTGAAGGGTGCCAGCTACCAGGCGCGCCTGAAGAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCGACACACACTTTGACATTGGCAACGGTAAGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTTCGTCATACCCGCCGTGTTGTGGGGTGCCAGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTCACCAAGCGCCTGAACGTCTGGGTGAATGGTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACGCGGGTGCCGCCTATTTCCCCAGCCTTGAAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCAGTACGGTGGATCGCTTTCGCGGGGCGTATGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TGCAGCCTTACCGCATAGGACTGGGAGTTTAGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCAAGATCACGCGCCAGCTGGCGATGGACAACG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCGGCTACGCCAGCGCGTTCAACCGCGTGGACAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCTCAAGGCTCGACACTACATATTGCGACTGGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTGTCTGCATCGCCCGAGCGTCTTTGCGGTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCATCAACCGGCGTTTGAGTCGGTTTTTTTAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GACTCCATGCCCGATGCCGAGTTCAGAAAGCTGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCAAAATACCAACGGTCATGGGCGGCAATGGCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCATTAGCTGGGCGTTGGCCGCAATCTGGCTGG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGATGAATACAGCCATTTTGCCGACGCTTTTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCAAGCACGCCGACGAAGGTGTACACGTAAGCGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTGATTGGTGAGCAGGCTTGGAAGCAGAGTCATGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACGATGAATACAGCCATTTTGCCGACGCTTTTCGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGCATTCGCACACTCGTTGCGGAGGCGTCAGCAGGTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCACTACATCGATGCGCTGCTGAATGCACTGATA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCCTGGCCATGGATGATGCGTTGGCTGCTACCAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGTCGCATGATGGGTGTCGAGGGCTCAAAATCCGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACTTGTGTAGCCAGGTTGTCTGGTAGACAGCGGGAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCGTTACAGAAAACCAATCTTTGGGCGGGGCATCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCAATCGTCTTGGAGTACTAACATGATGCATTACTA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTCCGTATGCCATCTGCCCCACCAGGCATCCGCAAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACATTCGGCTCGCAGGAGTGAGCAAAAGGCAATCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCTGTGCTGACCAGTGCGGTGGTGGCGACTACTA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGCCCTTGCGCCAATGATGGGCCATTGCGCCGAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGATACCGCCCCTCGCTGATCGCAATCGCCGGCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCGGGGGGACATTCAAGGCAAGATGTGCGGGTA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGCTTTCCGGCGCGCCTGCCACCGCCATATCTCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCCGGCGCTCACTGTGGCGGCGCACGGTGCCTTCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCCGGAACAATGCCCCGGTCGAGCAGCGCCTCGAGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGAAAACACCCAGTAGCCGCCCGGCTGACGCAACA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCGTCCTACGCCTTGACCAATAACAACGCCAATATA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCACGTCTGCCCGCACTGCCACGGCAAAATCACA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CATGTAGTTCTTGCCGCCCACACACCGCCGAGCAC
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCCTTGTAATTTTGGTAAGTGGATAGGTTGACCCCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCAGGGCCAACTGCGCGCCGTGGCGGCCGGTGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCTGGATGCTCCTTTATTGTCGGTTTCGGTCAAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATAATGCCGCCGCCTGCACAAACAGCGCATCAGTGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATGGCATCGCTCTCGACATGGGACGTATTTGGGCAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGCTGGATTTGTTTGAGGAAGCACCGGCCACCAGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACTGCATGGCCGAAGGCCATCCAGCATTGAGGCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCCTTCGGGCTGTTTTGCCCCCCAAACCTTGCTA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTCGTTGCCATTCCTTAACCTCCAAGTAAGGCGCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTGTTCACGAACGCCGTGGCGTAAGGGGAAGCGCTG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AAACCAAATCAACCTCTAGACCTTGAGGAACAATG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAACACACCATGACACCAGCGCAAGCCCTGGACAG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTGCCACTGCGTTGTCGCGTTGCGGGGGTCGTACG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCCAAACACCAGCGCATCGTCCCAGCCGCGCATG
GTTCGCCCGCCAGCAATGGAGGGCGCGGATTAAAAC	ACCAGCGCCGTGGCAGACTCAAGAAGCGCGCTACGGGGG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCGCGAAGCCGTTGTAATAAACAGTGCGACCCTG
GTTCGCCCGCCAGCAATGGCGGGCGGTGATTGAAAA	ACCCTGACGCTGGCTGACGGGCTGCCCGTTGAGGCG


>NZ_CP019240|2|2|372129-377810|CRISPRCasFinder
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AAGCCGAAAGCGTTTGCAGCCGCCTCGACAGCCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACAGCCATACCGCCGAGGGGGCCACCGAGGGCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTAGTTCTGCTCTCAAGGTTTCTCCTTATCTTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCTACAACAGGTTTATCTACAACAGGTTTATCTA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGGGCATGGGTGTGGAGGCTCCTGGGTGTGAGGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAACCCGGACATTCGTTATGGTCGGACGGGCGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACACGTCAGTCGCTGGCGTTGATTCGACGCTGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CATTTAACGCAGAGTTGAGCGCCCCATAGGGTGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCTGCTCAGTAACAGCGTAAACCCCCTCATATCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCGCATAAGTTTGACAAGTTCGATAGCTCAAAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTCGCCGCTATATTCGGTGTCCATCAGCAGTGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAATTCGAGTTCGTCGGCCCGTTGTTCCAATTGG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGCTGCGTGCTGGGCTTCGGAGATTGTTTCGCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACTGCTCCGGCGGTTGTCAGCCTGAATTGCACCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GATGTTAAGGGGTCAATGATGCGCTGCGCTTCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACATGGTCCGGTTCTTGTGGCGCTCCCCCAGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGTTACACCTGTAATTACAGTTAGTTTGATCAA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCAATTTAACGGCTTCTCTTGTCGGTCGCGTGCTT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CACGTTAACGGGCGGGCGGTGTGTCTGTAATGCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCAATGCCGCTGCCCCAGGTGGTGACGTTGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCTTGGTAGAGGTGGCGCGCGACATCGCTCAGTA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTGAAGGGTGCCAGCTACCAGGCGCGCCTGAAGAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCGACACACACTTTGACATTGGCAACGGTAAGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTTCGTCATACCCGCCGTGTTGTGGGGTGCCAGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTCACCAAGCGCCTGAACGTCTGGGTGAATGGTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACGCGGGTGCCGCCTATTTCCCCAGCCTTGAAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCAGTACGGTGGATCGCTTTCGCGGGGCGTATGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TGCAGCCTTACCGCATAGGACTGGGAGTTTAGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCAAGATCACGCGCCAGCTGGCGATGGACAACG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCGGCTACGCCAGCGCGTTCAACCGCGTGGACAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCTCAAGGCTCGACACTACATATTGCGACTGGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTGTCTGCATCGCCCGAGCGTCTTTGCGGTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCATCAACCGGCGTTTGAGTCGGTTTTTTTAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GACTCCATGCCCGATGCCGAGTTCAGAAAGCTGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCAAAATACCAACGGTCATGGGCGGCAATGGCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCATTAGCTGGGCGTTGGCCGCAATCTGGCTGG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGATGAATACAGCCATTTTGCCGACGCTTTTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCAAGCACGCCGACGAAGGTGTACACGTAAGCGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TGATTGGTGAGCAGGCTTGGAAGCAGAGTCATGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGATGAATACAGCCATTTTGCCGACGCTTTTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCATTCGCACACTCGTTGCGGAGGCGTCAGCAGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCACTACATCGATGCGCTGCTGAATGCACTGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCCTGGCCATGGATGATGCGTTGGCTGCTACCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGTCGCATGATGGGTGTCGAGGGCTCAAAATCCG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACTTGTGTAGCCAGGTTGTCTGGTAGACAGCGGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCGTTACAGAAAACCAATCTTTGGGCGGGGCATC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCAATCGTCTTGGAGTACTAACATGATGCATTACT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTCCGTATGCCATCTGCCCCACCAGGCATCCGCAA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACATTCGGCTCGCAGGAGTGAGCAAAAGGCAATC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCTGTGCTGACCAGTGCGGTGGTGGCGACTACT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGCCCTTGCGCCAATGATGGGCCATTGCGCCGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGATACCGCCCCTCGCTGATCGCAATCGCCGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCGGGGGGACATTCAAGGCAAGATGTGCGGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGCTTTCCGGCGCGCCTGCCACCGCCATATCTC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCCGGCGCTCACTGTGGCGGCGCACGGTGCCTTC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCCGGAACAATGCCCCGGTCGAGCAGCGCCTCGAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGAAAACACCCAGTAGCCGCCCGGCTGACGCAAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCGTCCTACGCCTTGACCAATAACAACGCCAATAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCACGTCTGCCCGCACTGCCACGGCAAAATCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CATGTAGTTCTTGCCGCCCACACACCGCCGAGCA
CGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCCTTGTAATTTTGGTAAGTGGATAGGTTGACCCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCAGGGCCAACTGCGCGCCGTGGCGGCCGGTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCTGGATGCTCCTTTATTGTCGGTTTCGGTCAA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATAATGCCGCCGCCTGCACAAACAGCGCATCAGTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATGGCATCGCTCTCGACATGGGACGTATTTGGGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGCTGGATTTGTTTGAGGAAGCACCGGCCACCAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACTGCATGGCCGAAGGCCATCCAGCATTGAGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCCTTCGGGCTGTTTTGCCCCCCAAACCTTGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTCGTTGCCATTCCTTAACCTCCAAGTAAGGCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTGTTCACGAACGCCGTGGCGTAAGGGGAAGCGCT
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AAACCAAATCAACCTCTAGACCTTGAGGAACAAT
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAACACACCATGACACCAGCGCAAGCCCTGGACA
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTGCCACTGCGTTGTCGCGTTGCGGGGGTCGTAC
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCCAAACACCAGCGCATCGTCCCAGCCGCGCAT
GGTTCGCCCGCCAGCAATGGAGGGCGCGGATTAAAAC	ACCAGCGCCGTGGCAGACTCAAGAAGCGCGCTACGGGG
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCGCGAAGCCGTTGTAATAAACAGTGCGACCCT
GGTTCGCCCGCCAGCAATGGCGGGCGGTGATTGAAAA	ACCCTGACGCTGGCTGACGGGCTGCCCGTTGAGGC
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCATTACATCAAGTGCGAGCCGTCGCTGTTTCAC
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAT	TTAAAACCCTTGGAGTAAATGCACCATGACCCAC
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC

>NZ_CP019240|2|1|372129-377882|CRT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AAGCCGAAAGCGTTTGCAGCCGCCTCGACAGCCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACAGCCATACCGCCGAGGGGGCCACCGAGGGCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTAGTTCTGCTCTCAAGGTTTCTCCTTATCTTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCTACAACAGGTTTATCTACAACAGGTTTATCTA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGGGCATGGGTGTGGAGGCTCCTGGGTGTGAGGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAACCCGGACATTCGTTATGGTCGGACGGGCGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACACGTCAGTCGCTGGCGTTGATTCGACGCTGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CATTTAACGCAGAGTTGAGCGCCCCATAGGGTGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCTGCTCAGTAACAGCGTAAACCCCCTCATATCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCGCATAAGTTTGACAAGTTCGATAGCTCAAAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTCGCCGCTATATTCGGTGTCCATCAGCAGTGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAATTCGAGTTCGTCGGCCCGTTGTTCCAATTGG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGCTGCGTGCTGGGCTTCGGAGATTGTTTCGCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACTGCTCCGGCGGTTGTCAGCCTGAATTGCACCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GATGTTAAGGGGTCAATGATGCGCTGCGCTTCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACATGGTCCGGTTCTTGTGGCGCTCCCCCAGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGTTACACCTGTAATTACAGTTAGTTTGATCAA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCAATTTAACGGCTTCTCTTGTCGGTCGCGTGCTT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CACGTTAACGGGCGGGCGGTGTGTCTGTAATGCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCAATGCCGCTGCCCCAGGTGGTGACGTTGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCTTGGTAGAGGTGGCGCGCGACATCGCTCAGTA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTGAAGGGTGCCAGCTACCAGGCGCGCCTGAAGAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCGACACACACTTTGACATTGGCAACGGTAAGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTTCGTCATACCCGCCGTGTTGTGGGGTGCCAGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTCACCAAGCGCCTGAACGTCTGGGTGAATGGTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACGCGGGTGCCGCCTATTTCCCCAGCCTTGAAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCAGTACGGTGGATCGCTTTCGCGGGGCGTATGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TGCAGCCTTACCGCATAGGACTGGGAGTTTAGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCAAGATCACGCGCCAGCTGGCGATGGACAACG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCGGCTACGCCAGCGCGTTCAACCGCGTGGACAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCTCAAGGCTCGACACTACATATTGCGACTGGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTGTCTGCATCGCCCGAGCGTCTTTGCGGTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCATCAACCGGCGTTTGAGTCGGTTTTTTTAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GACTCCATGCCCGATGCCGAGTTCAGAAAGCTGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCAAAATACCAACGGTCATGGGCGGCAATGGCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCATTAGCTGGGCGTTGGCCGCAATCTGGCTGG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGATGAATACAGCCATTTTGCCGACGCTTTTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCAAGCACGCCGACGAAGGTGTACACGTAAGCGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TGATTGGTGAGCAGGCTTGGAAGCAGAGTCATGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGATGAATACAGCCATTTTGCCGACGCTTTTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCATTCGCACACTCGTTGCGGAGGCGTCAGCAGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCACTACATCGATGCGCTGCTGAATGCACTGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCCTGGCCATGGATGATGCGTTGGCTGCTACCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGTCGCATGATGGGTGTCGAGGGCTCAAAATCCG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACTTGTGTAGCCAGGTTGTCTGGTAGACAGCGGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCGTTACAGAAAACCAATCTTTGGGCGGGGCATC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCAATCGTCTTGGAGTACTAACATGATGCATTACT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTCCGTATGCCATCTGCCCCACCAGGCATCCGCAA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACATTCGGCTCGCAGGAGTGAGCAAAAGGCAATC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCTGTGCTGACCAGTGCGGTGGTGGCGACTACT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGCCCTTGCGCCAATGATGGGCCATTGCGCCGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGATACCGCCCCTCGCTGATCGCAATCGCCGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCGGGGGGACATTCAAGGCAAGATGTGCGGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGCTTTCCGGCGCGCCTGCCACCGCCATATCTC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCCGGCGCTCACTGTGGCGGCGCACGGTGCCTTC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCCGGAACAATGCCCCGGTCGAGCAGCGCCTCGAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGAAAACACCCAGTAGCCGCCCGGCTGACGCAAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCGTCCTACGCCTTGACCAATAACAACGCCAATAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCACGTCTGCCCGCACTGCCACGGCAAAATCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CATGTAGTTCTTGCCGCCCACACACCGCCGAGCA
CGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCCTTGTAATTTTGGTAAGTGGATAGGTTGACCCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCAGGGCCAACTGCGCGCCGTGGCGGCCGGTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCTGGATGCTCCTTTATTGTCGGTTTCGGTCAA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATAATGCCGCCGCCTGCACAAACAGCGCATCAGTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATGGCATCGCTCTCGACATGGGACGTATTTGGGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGCTGGATTTGTTTGAGGAAGCACCGGCCACCAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACTGCATGGCCGAAGGCCATCCAGCATTGAGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCCTTCGGGCTGTTTTGCCCCCCAAACCTTGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTCGTTGCCATTCCTTAACCTCCAAGTAAGGCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTGTTCACGAACGCCGTGGCGTAAGGGGAAGCGCT
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AAACCAAATCAACCTCTAGACCTTGAGGAACAAT
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAACACACCATGACACCAGCGCAAGCCCTGGACA
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTGCCACTGCGTTGTCGCGTTGCGGGGGTCGTAC
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCCAAACACCAGCGCATCGTCCCAGCCGCGCAT
GGTTCGCCCGCCAGCAATGGAGGGCGCGGATTAAAAC	ACCAGCGCCGTGGCAGACTCAAGAAGCGCGCTACGGGG
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCGCGAAGCCGTTGTAATAAACAGTGCGACCCT
GGTTCGCCCGCCAGCAATGGCGGGCGGTGATTGAAAA	ACCCTGACGCTGGCTGACGGGCTGCCCGTTGAGGC
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCATTACATCAAGTGCGAGCCGTCGCTGTTTCAC
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAT	TTAAAACCCTTGGAGTAAATGCACCATGACCCAC
GGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CACCTATGACGTGCCCATTGGCAAGTGGGTTGACG
GGTTCGCCCGCCAGCAATGCTCTAAACCAGTTTCTTC

>NZ_CP019240|2|2|375058-377667|PILER-CR
	AAGCCGAAAGCGTTTGCAGCCGCCTCGACAGCCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACAGCCATACCGCCGAGGGGGCCACCGAGGGCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTAGTTCTGCTCTCAAGGTTTCTCCTTATCTTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCTACAACAGGTTTATCTACAACAGGTTTATCTA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGGGCATGGGTGTGGAGGCTCCTGGGTGTGAGGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAACCCGGACATTCGTTATGGTCGGACGGGCGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACACGTCAGTCGCTGGCGTTGATTCGACGCTGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CATTTAACGCAGAGTTGAGCGCCCCATAGGGTGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCTGCTCAGTAACAGCGTAAACCCCCTCATATCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCGCATAAGTTTGACAAGTTCGATAGCTCAAAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTCGCCGCTATATTCGGTGTCCATCAGCAGTGGT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAATTCGAGTTCGTCGGCCCGTTGTTCCAATTGG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGCTGCGTGCTGGGCTTCGGAGATTGTTTCGCC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACTGCTCCGGCGGTTGTCAGCCTGAATTGCACCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GATGTTAAGGGGTCAATGATGCGCTGCGCTTCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACATGGTCCGGTTCTTGTGGCGCTCCCCCAGCT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGTTACACCTGTAATTACAGTTAGTTTGATCAA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCAATTTAACGGCTTCTCTTGTCGGTCGCGTGCTT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CACGTTAACGGGCGGGCGGTGTGTCTGTAATGCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCAATGCCGCTGCCCCAGGTGGTGACGTTGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCTTGGTAGAGGTGGCGCGCGACATCGCTCAGTA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTGAAGGGTGCCAGCTACCAGGCGCGCCTGAAGAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCGACACACACTTTGACATTGGCAACGGTAAGGA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTTCGTCATACCCGCCGTGTTGTGGGGTGCCAGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTCACCAAGCGCCTGAACGTCTGGGTGAATGGTG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACGCGGGTGCCGCCTATTTCCCCAGCCTTGAAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCAGTACGGTGGATCGCTTTCGCGGGGCGTATGGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TGCAGCCTTACCGCATAGGACTGGGAGTTTAGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCAAGATCACGCGCCAGCTGGCGATGGACAACG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCGGCTACGCCAGCGCGTTCAACCGCGTGGACAG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCTCAAGGCTCGACACTACATATTGCGACTGGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTTGTCTGCATCGCCCGAGCGTCTTTGCGGTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCATCAACCGGCGTTTGAGTCGGTTTTTTTAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GACTCCATGCCCGATGCCGAGTTCAGAAAGCTGAT
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCAAAATACCAACGGTCATGGGCGGCAATGGCAC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGCATTAGCTGGGCGTTGGCCGCAATCTGGCTGG
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGATGAATACAGCCATTTTGCCGACGCTTTTCGC
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCAAGCACGCCGACGAAGGTGTACACGTAAGCGCA
AGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACTGATTGGTGAGCAGGCTTGGAAGCAGAGTCATGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACACGATGAATACAGCCATTTTGCCGACGCTTTTCGCAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAACAGCATTCGCACACTCGTTGCGGAGGCGTCAGCAGGTAGTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCACTACATCGATGCGCTGCTGAATGCACTGATA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCCTGGCCATGGATGATGCGTTGGCTGCTACCAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGTCGCATGATGGGTGTCGAGGGCTCAAAATCCGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACTTGTGTAGCCAGGTTGTCTGGTAGACAGCGGGAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCGTTACAGAAAACCAATCTTTGGGCGGGGCATCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCAATCGTCTTGGAGTACTAACATGATGCATTACTA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GTCCGTATGCCATCTGCCCCACCAGGCATCCGCAAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACATTCGGCTCGCAGGAGTGAGCAAAAGGCAATCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCTGTGCTGACCAGTGCGGTGGTGGCGACTACTA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGCCCTTGCGCCAATGATGGGCCATTGCGCCGAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGATACCGCCCCTCGCTGATCGCAATCGCCGGCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCGGGGGGACATTCAAGGCAAGATGTGCGGGTA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAGCTTTCCGGCGCGCCTGCCACCGCCATATCTCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCCGGCGCTCACTGTGGCGGCGCACGGTGCCTTCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CGCCGGAACAATGCCCCGGTCGAGCAGCGCCTCGAGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGAAAACACCCAGTAGCCGCCCGGCTGACGCAACA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CCGTCCTACGCCTTGACCAATAACAACGCCAATATA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACCACGTCTGCCCGCACTGCCACGGCAAAATCACA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CATGTAGTTCTTGCCGCCCACACACCGCCGAGCAC
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TCCTTGTAATTTTGGTAAGTGGATAGGTTGACCCCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCAGGGCCAACTGCGCGCCGTGGCGGCCGGTGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCTGGATGCTCCTTTATTGTCGGTTTCGGTCAAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATAATGCCGCCGCCTGCACAAACAGCGCATCAGTGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATGGCATCGCTCTCGACATGGGACGTATTTGGGCAA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ACGCTGGATTTGTTTGAGGAAGCACCGGCCACCAGA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AACTGCATGGCCGAAGGCCATCCAGCATTGAGGCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	GGCCTTCGGGCTGTTTTGCCCCCCAAACCTTGCTA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTCGTTGCCATTCCTTAACCTCCAAGTAAGGCGCA
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTGTTCACGAACGCCGTGGCGTAAGGGGAAGCGCTG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AAACCAAATCAACCTCTAGACCTTGAGGAACAATG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	CAACACACCATGACACCAGCGCAAGCCCTGGACAG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	TTGCCACTGCGTTGTCGCGTTGCGGGGGTCGTACG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	AGGCCAAACACCAGCGCATCGTCCCAGCCGCGCATG
GTTCGCCCGCCAGCAATGGAGGGCGCGGATTAAAAC	ACCAGCGCCGTGGCAGACTCAAGAAGCGCGCTACGGGGG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC	ATCGCGAAGCCGTTGTAATAAACAGTGCGACCCTG
GTTCGCCCGCCAGCAATGGCGGGCGGTGATTGAAAA	ACCCTGACGCTGGCTGACGGGCTGCCCGTTGAGGCG
GTTCGCCCGCCAGCAATGGCGGGCGCGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019240.1\|WP_075585873.1\|371613_371904_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP019240.1\|WP_083633831.1\|386724_387960_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|365888
NZ_CP019240.1\|WP_075585924.1\|383889_384069_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585869.1\|366240_368001_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP019240.1\|WP_075585928.1\|389399_391727_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|183799
NZ_CP019240.1\|WP_075585920.1\|379024_379831_+\|DUF2189-domain-containing-protein	unknown	unknown	gnl\|CDD\|370763
NZ_CP019240.1\|WP_075585865.1\|360138_361266_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237804
NZ_CP019240.1\|WP_075585922.1\|380857_382249_+\|aminopeptidase-P-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|182804
NZ_CP019240.1\|WP_075585929.1\|391891_392284_+\|guanine-specific-ribonuclease-N1-and-T1	unknown	unknown	gnl\|CDD\|238340
NZ_CP019240.1\|WP_075585872.1\|370575_371604_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP019240.1\|WP_075585925.1\|384111_385764_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274526
NZ_CP019240.1\|WP_075585918.1\|368055_369042_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP019240.1\|WP_075585871.1\|369922_370561_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP019240.1\|WP_075585923.1\|382537_383863_+\|phenylacetate--CoA-ligase	unknown	unknown	gnl\|CDD\|131210
NZ_CP019240.1\|WP_075585868.1\|365590_366244_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
NZ_CP019240.1\|WP_075585870.1\|369053_369896_+\|Bro-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|214989
NZ_CP019240.1\|WP_075585926.1\|385760_386555_+\|indolepyruvate-oxidoreductase-subunit-beta	unknown	unknown	gnl\|CDD\|180732
NZ_CP019240.1\|WP_075585867.1\|362966_365222_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP019240.1\|WP_139313319.1\|361441_361681_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585921.1\|379961_380735_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133044

Protein	Function_ID	Function_description	E-value
NZ_CP019240.1\|WP_075585873.1\|371613_371904_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.03513e-24
NZ_CP019240.1\|WP_083633831.1\|386724_387960_+\|glutamine-synthetase	gnl\|CDD\|365888	pfam00120, Gln-synt_C, Glutamine synthetase, catalytic domain.	5.41889e-123
NZ_CP019240.1\|WP_075585869.1\|366240_368001_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP019240.1\|WP_075585928.1\|389399_391727_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|183799	PRK12862, PRK12862, malic enzyme; Reviewed.	0
NZ_CP019240.1\|WP_075585920.1\|379024_379831_+\|DUF2189-domain-containing-protein	gnl\|CDD\|370763	pfam09955, DUF2189, Predicted integral membrane protein (DUF2189). Members of this family are found in various hypothetical prokaryotic proteins, as well as putative cytochrome c oxidases. Their exact function has not, as yet, been established.	1.17712e-37
NZ_CP019240.1\|WP_075585865.1\|360138_361266_-\|hypothetical-protein	gnl\|CDD\|237804	PRK14725, PRK14725, pyruvate kinase; Provisional.	4.2261e-110
NZ_CP019240.1\|WP_075585922.1\|380857_382249_+\|aminopeptidase-P-N-terminal-domain-containing-protein	gnl\|CDD\|182804	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.	4.92623e-138
NZ_CP019240.1\|WP_075585929.1\|391891_392284_+\|guanine-specific-ribonuclease-N1-and-T1	gnl\|CDD\|238340	cd00607, RNase_Sa, RNase_Sa. Ribonucleases first isolated from Streptomyces aureofaciens. In general, ribonucleases cleave phosphodiester bonds in RNA and are essential for both non-specific RNA degradation and for numerous forms of RNA processing. RNAse Sa is a guanylate specific endoribonuclease which belongs to the superfamily of microbial ribonucleases. Typical of this sub-family, the enzyme hydrolyses the phosphodiester bonds of RNA at the 3' oxygen end of guanosine residues to yield oligonucleotides with the guanosine-2',3'-cyclophosphate at the 3' end and the hydroxyl group at the 5' end. The terminal guanosine-2,3'-cyclophosphate is hydrolysed by guanyl RNAses to give guanosine-3'-phosphate.	3.16747e-45
NZ_CP019240.1\|WP_075585918.1\|368055_369042_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.74368e-145
NZ_CP019240.1\|WP_075585925.1\|384111_385764_+\|hypothetical-protein	gnl\|CDD\|274526	TIGR03336, IOR_alpha, indolepyruvate ferredoxin oxidoreductase, alpha subunit. Indolepyruvate ferredoxin oxidoreductase (IOR) is an alpha 2/beta 2 tetramer related to ketoacid oxidoreductases for pyruvate (1.2.7.1, POR), 2-ketoglutarate (1.2.7.3, KOR), and 2-oxoisovalerate (1.2.7.7, VOR). These multi-subunit enzymes typically are found in anaerobes and are inactiviated by oxygen. IOR in Pyrococcus acts in fermentation of all three aromatic amino acids, following removal of the amino group by transamination. In Methanococcus maripaludis, by contrast, IOR acts in the opposite direction, in pathways of amino acid biosynthesis from phenylacetate, indoleacetate, and p-hydroxyphenylacetate. In M. maripaludis and many other species, iorA and iorB are found next to an apparent phenylacetate-CoA ligase.	1.32837e-167
NZ_CP019240.1\|WP_075585871.1\|369922_370561_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	7.60127e-36
NZ_CP019240.1\|WP_075585923.1\|382537_383863_+\|phenylacetate--CoA-ligase	gnl\|CDD\|131210	TIGR02155, Phenylacetate-coenzyme_A_ligase, phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions. [Energy metabolism, Other].	0
NZ_CP019240.1\|WP_075585868.1\|365590_366244_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.21051e-95
NZ_CP019240.1\|WP_075585870.1\|369053_369896_+\|Bro-N-domain-containing-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	9.76356e-12
NZ_CP019240.1\|WP_075585926.1\|385760_386555_+\|indolepyruvate-oxidoreductase-subunit-beta	gnl\|CDD\|180732	PRK06853, PRK06853, indolepyruvate oxidoreductase subunit beta; Reviewed.	2.67644e-62
NZ_CP019240.1\|WP_075585867.1\|362966_365222_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.07943e-55
NZ_CP019240.1\|WP_075585872.1\|370575_371604_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP019240.1\|WP_075585921.1\|379961_380735_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|133044	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.	2.34848e-67

>NZ_CP019240.1|WP_075585873.1|371613_371904_+|CRISPR-associated-endonuclease-Cas2
MLVLVCYDVNTETKAGRRRLRRVARVCESTGQRVQKSVFECQLDVARFEALERELLAEIDPTMDCLRLYRIPGTRGFEVIEHGTFKAVDFDGPLVL
>NZ_CP019240.1|WP_075585872.1|370575_371604_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MQLLNTLYVTTPDTYLRLDNDTLRVEVDRETRLRVPLHHLCAVVCFGHTGLSAPLMHRLAESGVALVLLDDNGRFKARLEGAVSGNVLLRQAQFQRVADPVFTLDMARASVAGKIKNTRQVLQRGARETKSEDEAKVLTRLADDLAASLRALPGVSNLDSLRGVEGEAARQYFSGLNLLVRPDLRAAFAMDGRTRRPPRDRFNAMLSFLYAMWMNDCRSALEAAGLDPQVGFLHALRPGRAALALDLMEEFRPWADRLALTLINRGQLNASDFVLREGGGVSLEPDARKAVVVAYQERKKDDISHPLLAQTVPLGLVPLVQARLMARALREDGAPYVPFVAK
>NZ_CP019240.1|WP_075585871.1|369922_370561_+|CRISPR-associated-protein-Cas4
MNPVEPIPLSALQHWQYCPRQCGLIHLEQVFDDNVHTLRGQAVHAKADQPGVETAKGVRVERALPLWHDGLGLIGKSDVVEFLAGGVPYPVEYKHGSRNKAADIAACDDIQLAAQAMCLEGMTGQHVNEGALYYATSRRRRVVPITAQLRADVVQTAEAIRQMLASGTLAPPLGGEQAVRRCKACSLQDRCQPQATHAGLTTARAALFDPDA
>NZ_CP019240.1|WP_075585870.1|369053_369896_+|Bro-N-domain-containing-protein
MKILPTDFEGQSIRRVYDEDTETWWFSVIDVVQVLTQQPDDLTARKYWNQLKRRLANEGSQLVTTCHQLKMPAADGKQRLTDVATAETLLRLVQSVPSPKAEPIKLWLAKVGYERMQELADPALTLNRARQTWQQHGRSDKWIQQRMTGQETRNKLTDYWSEHDIKKGSEFAILTNIIHQEWTGVSVVEHKEAKGLTSHNLRDHMSEAELIFTALAELSTRQIAETADATGMTENKSAAKAGGRIARQARQQLESQTGKSVVTGENFLPRVSKKIAGDAY
>NZ_CP019240.1|WP_075585918.1|368055_369042_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTLKNRYDFVLIMDVKDGNPNGDPDAGNMPRLDAESGHGLMTDVSLKRKVRNFVGLVKEQDQREPVDGEKRFEIYVREKAILNHQNQRAYSALNLAVAQEDQAEDATESAAADAKKKKPAKEKRKGSADEVAQARKWMCQNFFDVRTFGAVMSTGVNCGQVRGPVQLTFARSVEPIVALEHSITRMAVATEAEAEKQQGDNRTMGRKHTVPYGVYVAHGFVSSFLAKQTGFGEEDLELVFQALAQMFEHDRSAARGEMSTRGLYVFKHDSELGNAPAHALFDRLVVKPTVEGEVIRSFDAYSVAFDGQSLAVGQTVQPALGVTLIRRC
>NZ_CP019240.1|WP_075585869.1|366240_368001_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQALADYYRRKCDDPDPAQRLPMFGLEQKEIPFLLEISAEGELLQMRDTRELQEKKKVAQSFRVPLGVKKTSGVAANLLWDTLEYVLGVDTKGKPERVAEQHAAFRARIVALPASAREDAGIQAVARFLEHIDLAQLERQPAWSDVLESNAVLSFRLQGDLDLVCQRPAVVNAVLNVSADEDARQAMCLVTGELAPVERLHASIKGVWGAQTSGANIVSFNARAFESYGKTERQGENAPVSRAAAFAYTTALNHLLRKDSPQRIQVGDASTVFWAERDSEFETSAPDIFGDPPKDDPDSGTRAVHALLEAVHSGRLAGPDGDTRFYVLGLAPNAARISIRFYHCLPLRELGQRIVQHFADLSLARGPHDPQYPSLFRLLAAVAVQNKADNIPPNLGGAIMDAIFAGVNTPYPSLWLNAAVSRCRAEQHVNYLRAAAIKACLNRQMRYAQLSSPNPSPEQEFLPMLDLSNPNPAYRLGRLFAVLEKIQEEASPGLNATIRDRYYGAASSTPVAVFTTLLRLKNAHLKKLAVGRTTWFEKLLGEVLGPVTDFPKHLPLPDQGRFALGYYHQRQDFFTRRSAEPGVD
>NZ_CP019240.1|WP_075585868.1|365590_366244_+|type-I-C-CRISPR-associated-protein-Cas5
MTSFCLEVSGPFACFTRPEMKVERVSYDVMTPSAARSIFESVLWKPAIRWRVHRIEVLKPFRWINLRRNEVSAVVSTRNVQQAMAAGSGTLGLYIEDERQQRAGYFLRDVAYRIHADLSLAPGGTEPLMKYTEMFTRRASKGQCVNQPYLGCREFAAAFSLVTADTPPATPIGETRELGWMLHDLDFTRPSDPQPRFFNAKLDKGVVQVPPFEEARG
>NZ_CP019240.1|WP_075585867.1|362966_365222_+|CRISPR-associated-helicase/endonuclease-Cas3
MAEPLAHSGGHLLTEHLRTVAALAAGFSQDFEHGAQAQRWAYSAGLWHDLGKYRPGFQRYVRLADNTDAHIEGKVGGREKTHSAAGALWAMQQLNQPDRPYGNILAYLIAGHHAGLDDWDGGLKERLHSEDAQLELKEALDARPPANILAHGDLIAQIPGGAPGFALWVRMLFSCLVDADFLDTEAHFDANKPARRDGFPTLAQMRQAFDAHMAGLPAANTSVNTLRADVLRQCRTKAALPAGFFSLTVPTGGGKTLSSLAFALEHAQAHGKRRVIYAIPYTSIIEQTADVFREVFKALGDEVLIEHHSQADAAEKDETARSRLACENWDAPLVVTTNVQLFESLFAAKTSRCRKLHNLVNSVIVLDEAQQLPPAFLQPILDVLNLLVTHYGVTVVLCTATQPALNSTTYFDANKNLRGLENVREIIDHPDALFDALKRVDVTLPPDWTTPTAWEDIAAQLSAEDCVLAIVSTRKAARELQRLMPADTLHLSALMCGAHRKEVIDQIKARLKAKREGCDQRPLRVVSTQLVEAGVDIDFPVVYRALAGLDSIAQAAGRCNREGRLNGKGRVVVFVPPEKPPLGHLRKGADACISTLRGQAHDPLARALFDRYFKEFYHSVDLDAKEVVKKLTINDRRTLSVQFRTAAEAFHLIEDEDAATVVVRYACVADELDMLLATLAVKGPKRWLMRKLQRYTVSIRKRVADKMLEQGDLKISSVPGLYMQIDASGLYDEKLGLYTEGVPFDALGNVF
>NZ_CP019240.1|WP_139313319.1|361441_361681_+|hypothetical-protein
MSRHVDNLDRLCNKLHRRFGEQDSLCVQAKEALETSKAQEQQSSKQYDWSVPYRVLIQNQQSEYMQQIQRPATRPLSAS
>NZ_CP019240.1|WP_075585865.1|360138_361266_-|hypothetical-protein
MNSQNKLHARALLAAPSSDAPGSQSRSLNLVEQLKAHTLDLLGPERADQPPRIMVTLTKDAASHFSAVQGLVSAGMDIARINCALDTPADWLSMAAHVRRAAEAAQRPVKILVVLAGAKIRTGEVAHHTPVLKLKPAKDQLGRVVSPARLLLRPMHSNTSLPGVDPSVGVWEPWLERLKSGMSLDFVDARGAKRHLQVIKRDELGAITECAQTAYLTPETVLTLGGVTGKKKHATLVCQIESQPSTLHLCTGDVLHLTKPNVNSVPELPAEDADASPGDPLQISCTAPQVIDQVKVGERIWFDGGRIGGVIRQKHADYLAIEITQAREGGDKLASDKSINLPDSQLDLPLLSAKDLGDLAVMAPYADILSLSFGL
>NZ_CP019240.1|WP_075585920.1|379024_379831_+|DUF2189-domain-containing-protein
MSQDIDEPPPPYVPPPSEAPLKEILKLPTFAALRWLQLGWQDFRAQTGISLFYGVAFWAMAMVMGMVFRNKPEYTMTLVSGCLLVGPFLALGLYEVSRRRETGQAPSFISSLTCWKTRLRSMGLLVGVLVVLELLWGRVSLVVIALFFNSGMPSSVGVMQALTNPENLEFVLAYLVVGGIFAGLTFAISVVSIPMILDRDTDAISAAITSIAVVLQNTGAMLLWGAVIVLLIGMSLLLPLNAGLLLAGPLLGHASWHAYRGSVHWLQA
>NZ_CP019240.1|WP_075585921.1|379961_380735_+|nucleotidyltransferase-family-protein
MLLAAGRGERMRPLTDTCPKPLLPVQGKPLMQWHLEALQRGGCQQVVINTAWLEDLIVQTFNGLFGIQPLWNKREQLSNSYKMTLQYSTEGRDFGAALETAGGICRALPLLFPPTDGVGRGVFWVLAADVFTPGFVFSSDAVERFAASGKLAHLWLVPNPAHNPRGDFGLDAATGLALNLPKDDPQPRYTYSTIGLYHRALFAPPWCDVVPGNSQGVKAALAPLLRAAMDQGQVSAELYAGAWTDVGTPERLAQLNA
>NZ_CP019240.1|WP_075585922.1|380857_382249_+|aminopeptidase-P-N-terminal-domain-containing-protein
MTTQTALYAQRRAALAKHIGPGGVAILPTAPEQQRNRDSDFLFRHDSYFYYLSGLTEPKAWLVISGDGKTTLFCQPKDLEREIWDGYRLGPDAALEALGVDAAFSVTELDKQLPALLDGAESVWYPFATHTGLEGRIDGWLGTLRARVRYGTLCPQQQRDLCGPLDEMRLFKDAHEQNVMRRACNISAGAHVRTMQRCAAMLRAGQEVREYHLDAELLHEFRRHGSQYPAYGSIVAAGANACVLHYRADAGRVQSGELVLIDAGCELDGYASDITRTFPANGTFSGAQKTLYELVLASQEAAIAVTKAGARFTDPHDATVKVLAQGMLDVGLLDKNTVGTVDDVIEKRSYFQFYMHRTGHWLGMDVHDCGAYTEPGEIGQVSTRKDALTGELIKDRPARILQAGMVLTIEPGLYVRPAPGVPEHFHNIGIRIEDDAIVTEADCELISRGVPVSVVDIEALMRA
>NZ_CP019240.1|WP_075585923.1|382537_383863_+|phenylacetate--CoA-ligase
MTFQRSEPGVLEPIETASRDEISALQLQRLQWSITHTYSNVAHFREKCDNLGVHPRDLTKLSDLAKFPFTTKVDLRDNYPFGLFAVPREQVVRVHASSGTTGKPVVVGYTAQDIDTWANLMARSMRAAGARAGDICHISYGYGMFTGGLGAHYGAERLGCMVVPVSGGQTEKQVQLILDFKPDIIMVTPSYSLVIAEEFERLGIPPEEISLRIGMFGAEPWGEAMRGEIEKKLGIHAIDIYGLTEVIGPGVASECIESKDGPVIWEDHFYPEIINPDTGEVLSDGEQGELVFTSLSKQAMPVIRYRTRDLTRLLPPTSRSFRRMDRLTGRSDDMLIIRGVNLFPTQIEEQILRDKRLSGNYQIVVTRDAHLDNLEVRCELQRDASAQMQVADLSLISKQLQYHFKTVIGISTRVTVLPFDSIPRTLAGKARRVIDERPKMT
>NZ_CP019240.1|WP_075585924.1|383889_384069_+|hypothetical-protein
MVTVTTLRLDLVNLSAANHIGLDLSALCPLKIKGAEWALAKYSALAALALNCRTRASLA
>NZ_CP019240.1|WP_075585925.1|384111_385764_+|hypothetical-protein
MTKTILLGDEAVARAAIDAGISVAYAYPGTPSTEIYMAIEEQVKERGLNVGGMWSTNEKVAVEQAVGASYAGVRVLVSMKHVGLNVAADPFMNAAVTGAHGGLVIVVADDPGMHSSQNEQDSRYFADFAMLPCLEPADQQQCYDFTRAAFDLSEQFQVPVLLRLVTRLAHSRSQVTLAPARQQNLPNYVNDASRFTLIPSNARRAYSLLLDKQSGMQAASEAHASNALTLHGNGLPGILVSGLAWSYLQEAMGDQLHGFNLLRIGMYPLPFQKIRELLDASSEVLVIEEGYPFIERLISAGGLMREKTIRGRLTGALPRAGELCPDAIKKCFGLPTAVSLQIKGLAEVLAARPPSMCDKCPHTDSYILIKEVIAELSGEVRVMGDIGCYSLGYMEPHQAIHSCLCMGASIGMAMGLAHAGMNPAICVIGDGTFTHSGLAPLLDAAKDNTNIKVFILDNSIIAMTGGQQTSATNEEVLSLVAGMGVPRGHIRIIEPTTHKKEQNLTVIREELAYVGLSVIIARRICITYAREIKANQQIKDAKRETQEVSA
>NZ_CP019240.1|WP_075585926.1|385760_386555_+|indolepyruvate-oxidoreductase-subunit-beta
MKFDLVIGGVGGQGVLSIAWVLDHAANEAGLYLKQSEVHGMAQRGGAVSAFVRLSDQPVASVLIAEGCADMVLSVEPLEALRYTKLLKPEGWIVTDVTPMVNIGNYPDTAALYPVLFSVPYLVALNATLLAKKAGNVKAQNMVVLGAAAMHLPLPAELLEKQINAMFASKSERVVKANIDAFRMGDSASRFAAALVASGVGSEVVAQVVSRIHFPPHPVSPALVDAWTARLLAPDAAQFAQSLFDEGEVVAIDEVAAGSEQMSA
>NZ_CP019240.1|WP_083633831.1|386724_387960_+|glutamine-synthetase
MPAERFAAGAELRICQAIPMQAVTGEYSYNPVFPDSDPDVRMLPDYHTLTLAPWASTPRAVAVHDCVELDGELCTFAPRSTLKRVLADYTARGLTPVVAPEIEFYLTGANTDPAQPLVPPTVRGGRAEVGQSAFSLNMLNELAPFWDEFRAALVTLHIDADTWIHEVGPTQYEINLMHGDAVAVADQAFLFKYAAREIALKHGLNAVFMAKPIAGSAGSSMHLHTSVVDALGANVFSLPDGTESALFGQFIAGLQTYGPELMLMFAPNVNSYRRYVAGSQAPTNMAWGYDNRTTGLRVPTSAAVARRVENRVAGADANPYLAIAATLAAGLAGIQERLQPSEPLSSNGYDEAYGLPRTMDESLYKMQHSMLAIQGLGADFVTGYCAVKALEYKHYLNEISAWERRFLLPQV
>NZ_CP019240.1|WP_075585928.1|389399_391727_+|NADP-dependent-malic-enzyme
MTHNSPEEKSAQLRRAALDYHQLPSPGKIAIAATKQLTNQHDLALAYSPGVAAPCEEIVKDPNNAHRYTSRGNLVAVITNGTAVLGMGDIGPLAAKPVMEGKAVLFKKFAGIDVFDLEINEKHDLDKLVDIIASLEPTFGGINLEDIKAPDCFYVERKLRERMKIPVFHDDQHGTAIVVGAAILNGLKVVGKDPAKVKLVTSGAGAAALACLGLLVKLGIARENIFVTDLAGVVYEGRTELMDDDKAFFAQKTSFRTLDEVMKGADVFLGLSAGGVLKGHMVAKMAANPLVFALANPTPEILPEEVKAVRSDAIIATGRTDYPNQVNNVLCFPYIFRGALDAGASTITLEMEIAAVHAIAELARAEQSEVVVAAYAGERLTFGREYLIPKPFDPRLMVVIAPAVAKAAADSGVATRPIGDFTAYREQLQSFVYASGTMMKQIFTAAKKAAHKRVAYCEGEEERVLRACQIVVDEGLARPTLIGRPAVIAQRIKKFGLRLEEELDYDVVNVEKDDRYRDFWQSYHQMTERKGVSVHAAKIDMRRRLTLIGSMLLHKGYVDGIVCGTWGTTQLHLHYIDQVIGKRSRSSLNSTQDVQIYACMNGLMLPDRQLFLVDTHVNYDPTAQELATITVMAAEEMKHFGMHPRAALLSHSNFGSSNQPSAVKMRQTLELLRVQAPWLEVEGEMHGDLALDSAARHAMMPHSTLAGDANLLVLPNIDAANIAYNLLKVTAGGNIAVGPVLLGAAKPVHILTASTTVRRIVNMTALTVADANANR
>NZ_CP019240.1|WP_075585929.1|391891_392284_+|guanine-specific-ribonuclease-N1-and-T1
MSRFDKCKLVFAGLCLSAVMATSPALARAPVSADIQATVRLPELPRQGEQVYSLILQGGPFASEKDGTVFGNRERLLPPYKRGYYREYTVPTPGLAHRGVRRIVCGGQPAKPDICYYTADHYASFRKIVP

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Crispr_ID: NZ_CP019240_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019240_3

1589305-1589435

Orphan

Consensus_repeat	Method
CGCCGCGCCGGGCCGCCCCAAGCAAGCGCAGCCCCCTCGGGGGGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019240_3

>merge|NZ_CP019240|3|1589305-1589435|CRISPRCasFinder
CGCCGCGCCGGGCCGCCCCAAGCAAGCGCAGCCCCCTCGGGGGGCAGAGAGGACACGCCAGTGCCGAACGTGGGGGCTGAAACTCGCCGCGCCGGGCCGCCCCAAGCAAGCGCAGCCCCCTCGGGGGGCAG

>NZ_CP019240|3|3|1589305-1589435|CRISPRCasFinder
CGCCGCGCCGGGCCGCCCCAAGCAAGCGCAGCCCCCTCGGGGGGCAG	AGAGGACACGCCAGTGCCGAACGTGGGGGCTGAAACT
CGCCGCGCCGGGCCGCCCCAAGCAAGCGCAGCCCCCTCGGGGGGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019240.1\|WP_075586915.1\|1580878_1581370_+\|DUF1499-domain-containing-protein	unknown	unknown	gnl\|CDD\|377828
NZ_CP019240.1\|WP_083633961.1\|1581584_1583075_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235774
NZ_CP019240.1\|WP_075586913.1\|1577664_1578702_+\|cell-division-protein-FtsZ	unknown	unknown	gnl\|CDD\|129010
NZ_CP019240.1\|WP_075586922.1\|1593710_1594337_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|224104
NZ_CP019240.1\|WP_075586924.1\|1595529_1595955_-\|CopG-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|375291
NZ_CP019240.1\|WP_075586921.1\|1593211_1593640_+\|GNAT-family-acetyltransferase	unknown	unknown	gnl\|CDD\|235142
NZ_CP019240.1\|WP_075586914.1\|1578715_1580869_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP019240.1\|WP_075586920.1\|1591840_1593088_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|367519
NZ_CP019240.1\|WP_075586923.1\|1594350_1595499_-\|PHB-depolymerase-family-esterase	unknown	unknown	gnl\|CDD\|313683
NZ_CP019240.1\|WP_075586916.1\|1583191_1583794_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|237227
NZ_CP019240.1\|WP_075586918.1\|1586519_1587329_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP019240.1\|WP_075586929.1\|1600035_1600443_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_CP019240.1\|WP_075586925.1\|1596179_1598219_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP019240.1\|WP_075586926.1\|1598345_1599131_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|234605
NZ_CP019240.1\|WP_075586912.1\|1574143_1577668_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|274008
NZ_CP019240.1\|WP_075586910.1\|1572098_1572776_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|372587
NZ_CP019240.1\|WP_075586928.1\|1599490_1600039_-\|septation-protein-A	unknown	unknown	gnl\|CDD\|234704
NZ_CP019240.1\|WP_075586911.1\|1572875_1573877_+\|tRNA-dihydrouridine(20/20a)-synthase-DusA	unknown	unknown	gnl\|CDD\|236991
NZ_CP019240.1\|WP_075586917.1\|1583886_1586487_-\|[protein-PII]-uridylyltransferase	unknown	unknown	gnl\|CDD\|235101
NZ_CP019240.1\|WP_075586927.1\|1599186_1599471_-\|BolA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376601

Protein	Function_ID	Function_description	E-value
NZ_CP019240.1\|WP_075586915.1\|1580878_1581370_+\|DUF1499-domain-containing-protein	gnl\|CDD\|377828	pfam07386, DUF1499, Protein of unknown function (DUF1499). This family consists of several hypothetical bacterial and plant proteins of around 125 residues in length. The function of this family is unknown.	3.61359e-45
NZ_CP019240.1\|WP_083633961.1\|1581584_1583075_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235774	PRK06292, PRK06292, dihydrolipoamide dehydrogenase; Validated.	4.19697e-177
NZ_CP019240.1\|WP_075586913.1\|1577664_1578702_+\|cell-division-protein-FtsZ	gnl\|CDD\|129010	smart00771, ZipA_C, ZipA, C-terminal domain (FtsZ-binding). C-terminal domain of ZipA, a component of cell division in E.coli. It interacts with the FtsZ protein in one of the initial steps of septum formation. The structure of this domain is composed of three alpha-helices and a beta-sheet consisting of six antiparallel beta-strands.	2.23769e-19
NZ_CP019240.1\|WP_075586922.1\|1593710_1594337_+\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|224104	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].	9.74503e-36
NZ_CP019240.1\|WP_075586924.1\|1595529_1595955_-\|CopG-family-transcriptional-regulator	gnl\|CDD\|375291	pfam17723, RHH_8, Ribbon-Helix-Helix transcriptional regulator family. This family of proteins are likely to be transcriptional regulators that have an N-terminal ribbon-helix-helix domain. Although some members of the family are annotated as CopG, this family does not include that protein.	4.11116e-59
NZ_CP019240.1\|WP_075586921.1\|1593211_1593640_+\|GNAT-family-acetyltransferase	gnl\|CDD\|235142	PRK03624, PRK03624, putative acetyltransferase; Provisional.	5.22859e-60
NZ_CP019240.1\|WP_075586914.1\|1578715_1580869_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP019240.1\|WP_075586920.1\|1591840_1593088_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|367519	pfam03486, HI0933_like, HI0933-like protein.	5.39714e-159
NZ_CP019240.1\|WP_075586923.1\|1594350_1595499_-\|PHB-depolymerase-family-esterase	gnl\|CDD\|313683	pfam10503, Esterase_phd, Esterase PHB depolymerase. This family of proteins include acetyl xylan esterases (AXE), feruloyl esterases (FAE), and poly(3-hydroxybutyrate) (PHB) depolymerases.	2.66495e-63
NZ_CP019240.1\|WP_075586916.1\|1583191_1583794_+\|peptide-deformylase	gnl\|CDD\|237227	PRK12846, PRK12846, peptide deformylase; Reviewed.	3.97075e-80
NZ_CP019240.1\|WP_075586918.1\|1586519_1587329_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	4.79314e-158
NZ_CP019240.1\|WP_075586929.1\|1600035_1600443_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	1.72496e-68
NZ_CP019240.1\|WP_075586925.1\|1596179_1598219_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	1.91739e-89
NZ_CP019240.1\|WP_075586926.1\|1598345_1599131_-\|peptidylprolyl-isomerase	gnl\|CDD\|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	5.45128e-25
NZ_CP019240.1\|WP_075586912.1\|1574143_1577668_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
NZ_CP019240.1\|WP_075586910.1\|1572098_1572776_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|372587	pfam13386, DsbD_2, Cytochrome C biogenesis protein transmembrane region.	6.71985e-34
NZ_CP019240.1\|WP_075586928.1\|1599490_1600039_-\|septation-protein-A	gnl\|CDD\|234704	PRK00259, PRK00259, intracellular septation protein A; Reviewed.	2.67171e-74
NZ_CP019240.1\|WP_075586911.1\|1572875_1573877_+\|tRNA-dihydrouridine(20/20a)-synthase-DusA	gnl\|CDD\|236991	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA.	0
NZ_CP019240.1\|WP_075586917.1\|1583886_1586487_-\|[protein-PII]-uridylyltransferase	gnl\|CDD\|235101	PRK03059, PRK03059, PII uridylyl-transferase; Provisional.	0
NZ_CP019240.1\|WP_075586927.1\|1599186_1599471_-\|BolA-family-transcriptional-regulator	gnl\|CDD\|376601	pfam01722, BolA, BolA-like protein. This family consist of the morphoprotein BolA from E. coli and its various homologs. In E. coli over expression of this protein causes round morphology and may be involved in switching the cell between elongation and septation systems during cell division. The expression of BolA is growth rate regulated and is induced during the transition into the the stationary phase. BolA is also induced by stress during early stages of growth and may have a general role in stress response. It has also been suggested that BolA can induce the transcription of penicillin binding proteins 6 and 5.	4.48009e-30

>NZ_CP019240.1|WP_075586918.1|1586519_1587329_-|type-I-methionyl-aminopeptidase
MTITIKDATGIAGMRVAGRLAAELLDYLAPFVKPGVTTNELDRLADDYTTQVQGAISAPLNYAPGGHNPYPKSICTSINHQVCHGIPNDKPLKKGDIVNVDVTVIKDAWHGDSSRMYMVGEASVAAKRLCKLTYDAMWMGIMKVKAGAYLGDIGHAIQVFAEGQGLSVVREFCGHGIGANFHEDPQVLHYGRPGTLDQLKAGMTITIEPMLNLGRREIKEMGDGWTIVTKDRTLSAQWEHTVLVTPTGYEVLTLSEHSPPIPAFVTPSA
>NZ_CP019240.1|WP_075586917.1|1583886_1586487_-|[protein-PII]-uridylyltransferase
MTTSQIQRSQYRTEKAALLDALAASGASTRSVNPALQGLSRLADEALIRLWQQAGFSAPFALLAVGGFGRQEMYPHSDVDVLVLLPDDQSPEADPALKARIERFIGSCWDAGLEIGSSVRSVSECLDESAKDVTVQTALLEARLVIGSAALCADFQSAIFGAMDANAFFVAKTLEMEQRHNKFDDTPYALEPNCKESPGGLRDLQVILWVAKAAGLGANWNALAKAGLATAFEVKQIKHNEAVLRLIRARLHLISGRREDRLVFDLQTSVAHSFDYQPSDAVTDQRAFVRPSEKLMRHYYWAAKAVTQLNQILLLNIEERLNPLMHTTRPLRPLNDHFMDKAGMIEVVSDDLYQRNPHAILQTFLVYQTYYGIKGLSVRTLRALYNARNLMNADFRRDPVNRATFRQILMYPSGLTHALRLMNQTSVLGRYLWAFRRIVGQMQHDLFHVYTVDQHILMVLRNVRRFFIVEHAHEYPFCSQLASGWDKPWILHVAALFHDIAKGRGGDHSQLGALEVRRFCKHHGIAGADAELIEFLVREHLTMSRIAQKSDLSDPDVIAAFAQHVGSERALTALYLFTVADIRGTSPKVWNAWKGKLLEDLYRATSRALGGHAPDLHAEVQERQRDALVELALLSQPFESHKALWATLDVGYFMRHDAVEIAWHARMLSRHLGGKMPVVRARPSPVGEGLQVLVYTPDQTDLFARICGFFDHRNFSILDARIHTTQNGYALDTFQVVATYLPDHYRELVNMIESELTQVIATSAPLPAPSRGRVSRRVKSFPITPRVSLKPDEKAQRWLLNISASDRAGLLYSVALVLARHKVDLNLAKINTLGERVEDTFLIQGEALQNNRAQIEIETELLEALA
>NZ_CP019240.1|WP_075586916.1|1583191_1583794_+|peptide-deformylase
MTVRDILKMGDPRLLRVAQPVTAFDTDELHLLISDLLDTMHAADGAGLAAPQIGVDLQLVIFGSGQPNPRYPQAPVVPRTVLINPSIIPLPPLADGAVNDDLFAGAATLSATMPQIVEDWEGCLSLPGLRGKVPRFARIRYTGFDQYGDPIDRAVDGFHARVVQHECDHLIGKLYPMRVADFTQFGFNAVLFPGLDQPAD
>NZ_CP019240.1|WP_083633961.1|1581584_1583075_+|dihydrolipoyl-dehydrogenase
MSNSSSNKSQSQTKNNPDSTGHSDQTFDAIIVGAGSAGLAALREVAKRTKRFLIINDGAYGTTCARVGCMPSKLLIEAANAYHRRHTFETFGITGSNALAVDIPAVLRRVRRLRDDFVAGTVSITDELGARSVSGRAQLLSSTQVQVNGQTYSAKGIILAPGSSPILPPAMQALGARVLTTDTLFEQTTLGPRMAVIGMGPLGIEMAQALARLGVAVHGYATKEMLGGMSDPDVNAELRQALERDITLNIGAEASLHAVEGGIEVRSGAHRTVVDQVLVAIGRSPNLQGLGLATLGVPLDKHGLPPVNPKSMQVGDSPVYLAGDAHNDRPLLHEAADEGHIAGLNAMAPTPQCFERRIPLAIVFCDPNAAVVGQGFSALQRQDGLQFVTGSVNFVGQGRARAGQRNQGRLSVYADAASGCLLGAELCAPAGEHLAHLLALAVSQKLSVAQVLGMPFYHPVLEEGLRSALRDAARQLPDAVSSDLAHCGPIGALALD
>NZ_CP019240.1|WP_075586915.1|1580878_1581370_+|DUF1499-domain-containing-protein
MLILRWLMVGLLVLAVAAMAAGQAGLLQGKVPTDLGVHQGKLKSPSATANSVSSQASLYPDHPQRGYADVAPLALRGDGPATIARLQRLVAAMPGAHIVESTPDYLYVQYTTSIMKFVDDVEFWFDPKAQTIQVRSASRVGESDLGVNRKRVEAVRQALADQS
>NZ_CP019240.1|WP_075586914.1|1578715_1580869_+|NAD-dependent-DNA-ligase-LigA
MHTADLFAPSPDDAQPIAQRLTKLRQTLHHHAYLYYVLDAPSLPDAEYDRLFQELQALEARHPELVTTDSPTQRVGGRALDQFAQVRHALPMLSIRTETDTTPAGAESFDARIRRELSLTESDPPVQYVAEPKFDGLAMSLRYEHGVLVQAATRGDGETGEDVTQNIRTIGQIPLRLIAPTPGTGVSSLPPEGETCPPVPAMLEVRGEVYMRRDDFDALNERQRQKIAAGAKGEKTFVNPRNAAAGAVRQLDPAIAAQRPLSFFAYGLGEVSPPDAGGPVFATHFDLLQTLKSWGFPVSALVQQAQGATELVAYYNAIARQRDSLGFDIDGVVYKVNSLALQRQLGFVTREPRWAVAHKFPAQEMLTTVLAIDVQVGRTGKLTPVAKLAPVFVGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLLDKRVGEPEVFTMPRTCPVCDSAAVREEGEADYRCTGGLFCRAQRKEAILHFAQRRAVEVQGLGEKLVDQLVDASITHTLPDLYRLGLTALANLDRMADKSAQNLLEALEKSKQTTLPRFLFGLGIRHVGEATAKELARHFGQLDAIMDATEEQLLEVADVGPIVAKSLRTFFDQPHNREVAEQLRACGVSWPEGPPAERVPTPLSGKTFVLTGTLPTLAREDAKALIEAAGGKVAGSVSKKTSYVVAGTEAGSKLDKALELGVPVLDEAGLRALLDVEFH
>NZ_CP019240.1|WP_075586913.1|1577664_1578702_+|cell-division-protein-FtsZ
MSPLQLGLAAAGGALLLAMLAYYLWLAGKNKPRQPDAVLPSATESFHREPTLDDAALSGGVEDTGFAIPVPEKKPGLDALIDVIAPVALDAAVSGDAVLAALPPTRRVGSKPFAVEGLNTETQRWEAALPGQRYSQLQAGVQLANRSGALNDIEFSEFVMKAQGFCDTLGGTPDFPDMRREVGRARELDQFASDHDAQIGFMLRARRSAWSPSYVQQMAARQGFVPGSMAGRMVLPGTSGPVPVISLSFDTQAALAEDVSQSALRELNMSLDVPQVERAERAFARMCEAALALAKEMDGIVTDDAGVPLPPEAMEVIFADLEQLYDTLDQRELSAGSVLARRLFS
>NZ_CP019240.1|WP_075586912.1|1574143_1577668_+|chromosome-segregation-protein-SMC
MRLNSIKLSGFKSFAEPTNFVLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGESMQDVIFNGTTTRKPASRASVELVFDNDDHRAGGQWSQFAEIAVKRVLTRDGSSSYYINNQAVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESRPQELRLFLEEAAGVSKYKERRRETENRLSDTRENLTRVEDILRELNANLDKLEKQAEVAQKYNTLSHAATLKQQQLWYLKRSELDADQARVKLESLEAVNALESRLADLRHTESELETVRQAHYAAGDQVNQAQGKLYEASTEVGRLEAEIRFVVEGRQRVELRLRTLQEQATQWATRSQDAQTELESLSELELLGEEKNELFAAQVEDQAQQLPELEDALRLAQCAANEQRASVAQVQQQLGVLAAEQRGIEEQSRQLETRRSRLQQDRQTLAVPDESCLASQQNLLARANDDAELAQARLAELQDTAPELDDQRRTQQQQVNAESARLADLSARLDALKALQERVKTDGKLQPWLQKHGLDHLQGLWTRLHIEPGWENALEGALRERLGALEVSRLEMVRAFANDVPPAKLAFYSPPEAGAASSSATLPRLADLLRLHDAGQKAVLDDWLQGCFSAASLEDALASRSQLQPGELIFVKAGHVVGRHSVSFYAPDSEQAGLLARAQEIENLEKQSRAQVLIFDGSRAALVRAESAYADLSQRLEAARREATQAQASAHALQVDTLRLTQAAEQARQRSTQITDDLAEVVAQLEDLQERRVLAEARFEELDQQLADTQGRHAELDDSVISAERKLADCREQQRSLERQMQEASFALRSLGARRSELSRAMETAAQQADSIRAEDQRAQDELLRLNDAAAQGGLQQALAVKLDCEKHLGAQRSQYDDLTAKLRASDERRLQLERALDPLRASITEFQLKEQAARLGYEQYTQLLADAQADLAVVEASIAADSVRLAGLQAEIDRLNREIAALGAVNLAALDELAVARERKEFLDAQSADLNEAMATLEDAIRKIDGETREMLSGTFNTVNEHFGKMFPELFGGGNARLVITGSEILDSGVQVIAQPPGKKNQSIALLSGGEKALTAIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVKSMSRETQFLFISHNKIAMEMAQQLIGVTMQEQGVSRIVAVDMDMALNLADQEELL
>NZ_CP019240.1|WP_075586911.1|1572875_1573877_+|tRNA-dihydrouridine(20/20a)-synthase-DusA
MQPQILVEPQRWRMSVAPMLDWTDRHCRYFHRLLSHHALLYTEMVTTGALIHGDVARHLRFNAEEQPVALQLGGSEPADLAHCARLGAQWGYAEINLNCGCPSERVQRGAFGACLMAEPQLVADGVKAMVDAVSVPVTVKHRIGIDQVENYDFVRDFVGTVSQAGCHTFIVHARNAWLKGLSPKDNREIPPLRYDWAYRLKRDFPELVIVLNGGVTSTEQVQAHLTQLDGVMLGREAYHNPWWLSQWDSAFFAAAPKGELTRESVEQQMVDYMARELAAFGTTWPSIARHMLGLRHGLPGARHWRRVWSDHSLKALPPAQVMALAHGPDLYEK
>NZ_CP019240.1|WP_075586910.1|1572098_1572776_+|sulfite-exporter-TauE/SafE-family-protein
MQTTLATTALLMGLAGGPHCIAMCGAACAGIGQAAGDRRASAMWLFQAGRVLGYSAMGALAAASMQALGWMTVQSAALRPVWTMFHVAVLVMGLVLMFNAQQPIWLEQAGKKLWGIARNLVVRRGLSGTLMLGMVWTFLPCGLLYSALLVAGLTGRAVDGALVMGLFALGTSVSMMLGPWLWLRFGSNSNGDWGVRLAGLALAASAGWALWMAYAHDQAPWCSPI
>NZ_CP019240.1|WP_075586920.1|1591840_1593088_+|NAD(P)/FAD-dependent-oxidoreductase
MEKFDVVIVGAGAAGLFCAGVAGQLGLKVLVVDHSKTVAEKIRISGGGRCNFTNLDTGPNNFLSDNPRFCRSALSRYTPRDFTALLQKHQVGFHEKHKGQLFCDRSAEDIITMLLAECALGGVTRWQPCGVKNIGFLASSPYGTSASSYEIDTTQGTVHCAALVVASGGLSIPKIGATDLGYRLARQFDLPVVTPRAALVALTFDADAWAPFAQLSGLSLPVKIETGSKKSTIAFAEDLLFTHRGLSGPGVLQISSYWQAGTPIRLNLAPNTQLLQQLSHAKATSRKLIANELAALVPSRLADTWTTLGDQASHNWQRPINEASDKALAALAQGLTRWEITPTGSEGYKKAEVTAGGVDTTALSSQTMESRQPGLYFIGEVVDVTGWLGGYNFQWAWASGFACAQGLAKKLLPVP
>NZ_CP019240.1|WP_075586921.1|1593211_1593640_+|GNAT-family-acetyltransferase
MHIIIDYTDAIHRRQVIALWETVFGYEDSHNQPGLAIDKKLAVPDGLFFVAVQGDTVVGSVLAGYDGHRGWLYAVAVHPLHRKQGLGKALVHFAEQALTARGCLKINLQLIAGNASVAFYEALGYAVEPRVSMGKKLSQNLP
>NZ_CP019240.1|WP_075586922.1|1593710_1594337_+|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MSTNDTKKPFSMIREFTLADWFTLGNAVCGMGAMFSIMTYLQNGDVVHVYFACALVLAAFVFDVLDGRIARWRQKTSLLGRELDSLADVISFGVAPALIAYGCGMQGLYDRVILAAFVACGVSRLARYNITAEALSQGQGKVKFFEGTPIPTSLLLVFVLFLAAWQGALHESLWFGKVMLGGFTLHPLVLMFAVSGSLMVSRIRIPKL
>NZ_CP019240.1|WP_075586923.1|1594350_1595499_-|PHB-depolymerase-family-esterase
MNTKLQNLMRQATQLTQSGNLSEATEVIQRFLRGNVPDPVPTAAPAHSKESPLVLDDCVFEVIKPVSEPTLDTRKTAHTARPNTGASGEFTSGSHTHAGLTRRYKLYVPPGHAGKALPLVVMLHGCTQNPDDFAAGTGMNQRAQAQGFFVLYPQQSSESNPQACWSWFKHNHQKRGMGEPALIASLTQAVIQQYALDARRVYVAGLSAGGAMAAVLAGAYPDIYAAVGVHSGLPAGAASNVAQALLVMKSGHSGISLPGKRRQAGAPTASEKHPPINIPTIVFHGDEDKTVHPRNGEKLIAAVQGHAAAGAQLEQGVSAHGRRYTRSIRHGDSGSTMSEHWLVHGGGHAWSGGLAAGSYTDNHGPDATGEMLRFFFSHQLKA
>NZ_CP019240.1|WP_075586924.1|1595529_1595955_-|CopG-family-transcriptional-regulator
MNQITTQTPAKLKLAESEKITINLGFVDLGQIDLLVAESFYSNRTDFIRTAIRNQLSTHADAVKQVVARKTLVLGMQHVSAADLRALQAARQMLELRVLGLAVIAADVTPELALATIASIEVLGALQASPAVKTALADRLR
>NZ_CP019240.1|WP_075586925.1|1596179_1598219_-|U32-family-peptidase
MSLPVHHVELLAPARDAAIGMEAVNHGADAVYIGGPGFGARSSADNSVADIARLVTHAHRFNSRIFVTLNTILRDDELEPARKLAWQLYDAGVDALIIQDMGLLALGLPPLQLHASTQCDIRTPEKARFLQDVGLSQIVLARELTLEQIAAIRAATLPDQCAIEFFVHGALCVAYSGQCYISAAHTGRSANRGECNQACRLPYQVIDDKGRFVAHDKHVLSMKDNNQSANIAALVDAGVRSFKIEGRYKDMAYAKNITAHYRTLLDEVIEERQHTDNPLMRASSGKTTFTFTPDPNQNFNREFTDYFVNDRQDTIGAFDSPKNPGQAIGHVLQTGPNWVELELTSRTTELHNGDGLCYYDLQKELVGLAINRAELISAKKARWRVFPKDALDTLKDLRAGVEVNRNRDVHWLRQLEKKSSDRRIGVWANLLVLSDAVQLTLTDEDGHSATVQQPFPAANRQEALDADAALEQVRSQLSRLGTTNFIAISAEITWARGQFSAIVLPSSQLNTLRRDAVEQLDTARATAFTRLPRATPVEPPVPYPEDSLSYLANVFNQKAHDFYGRHGVKVIAPAYEAVKEFGEVSLMITKHCVRFSLSLCPKQAKGVTGVQGFVKAEPLQLVNGREKLTLRFDCKACEMHVVGKIKPGVAKQSRQELAEVRNGAPLVFHKKHPLTPFGH
>NZ_CP019240.1|WP_075586926.1|1598345_1599131_-|peptidylprolyl-isomerase
MKNKLLTSFALAALVAAMSPLAQAQNLAIVNGKAVPLARVQALSQQVQRSGREVTPEIEKQIKDEVIAREIFIQEAQKQGLDTTEDYKVQMDLARQTILIRDLFTNFQKTNAVTDEEVKAEYDKFAAANSAKEYKARHILVETEAEAKAIIAQLKKGGKFEDIAKKSSKDPGSGANGGDLDWAPAGNYVTEFSQALTALTKGKLTTTPVKSQFGYHVIRLDDVREAQLPKMQDVKPQIAEQLQQQKLAKFQTDLREKAKVE
>NZ_CP019240.1|WP_075586927.1|1599186_1599471_-|BolA-family-transcriptional-regulator
MTTILAPTAARLQQRLQSVLQPSALEVIDESAQHAGHIGANDSGAGTHFRVRITCQQFVGERPVTRHRLVYDALQDFLDQGLHALAIEAKVPTC
>NZ_CP019240.1|WP_075586928.1|1599490_1600039_-|septation-protein-A
MKILIDFFPILLFFGAFKLYDIYIGTGVLMAATVVQMAVIYAIDKKLTTMHKITLALILVFGTLTLVLQDERFIKWKPSVLYAAMAIGLGVAVWVYKKNFLKALLGSQLTLPEPVWMRLNVLWIGYSAFMAIINGYVAAYFSTDAWVNFKIWGYAFPLVFLVGQGFYIARYLTEEEPKSPAP
>NZ_CP019240.1|WP_075586929.1|1600035_1600443_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
MTFPIQKTEEQWQEVLKEKGAEHGAFSVTRQAATERAFTGKYERHWADGSYHCICCGNKLFDADTKFDAHCGWPSFSLAVPGAITDITDHSFGMARVETVCAQCGAHLGHVFDDGPTPTGLRYCMNSASLNFEAS

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Crispr_ID: NZ_CP019240_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019240_4

1623234-1623967

TypeIII

Consensus_repeat	Method
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	PILER-CR
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CRISPRCasFinder
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CRT

10 spacers

cas2,cas1,cas6,csx1,csx16,cmr6gr7,cmr5gr11

The CRISPR arrays of NZ_CP019240_4

>merge|NZ_CP019240|4|1623234-1623967|PILER-CR,CRISPRCasFinder,CRT
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACATAGATTTCGTTTTGAGTTCATCAGGTACAGGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACTGCGCTGCTGCTGCGCGTTCTTTGCGTATCGCGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACGGCAGTTTCGAGTTCATCGTTCTTTTTATCCAACGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACCCGAAGTCGCCTCTTGATGCTCACCCGCGCCGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACTTTTTGCCCTCATAGGTTTCGATGTGAATCTCGGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACGTCCAACATAGCGACAATGTCGCCGCGTCCGATAGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACATACCTGCCTGAATCAGTGCGTTTTCCGCCGTACGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACCTCTGAAGACTGTTCAGCTCGTACTGCTGTTTCGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACCATCACAAAGTCATACACCACGATAGGGCGCAGGAACGAATACCAGCCCTGAATTCAAAGGGATTAAGACAGCACCAACAAACGCAGAATCTTGCTGCTCCTGAACGAATACCACCCCTGAATTCAAAGGGATGAAGAC

>NZ_CP019240|4|3|1623234-1623967|PILER-CR
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	ATAGATTTCGTTTTGAGTTCATCAGGTACAG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	TGCGCTGCTGCTGCGCGTTCTTTGCGTATCGC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	GGCAGTTTCGAGTTCATCGTTCTTTTTATCCAAC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CCGAAGTCGCCTCTTGATGCTCACCCGCGCC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	TTTTTGCCCTCATAGGTTTCGATGTGAATCTCG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	GTCCAACATAGCGACAATGTCGCCGCGTCCGATA
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	ATACCTGCCTGAATCAGTGCGTTTTCCGCCGTAC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CTCTGAAGACTGTTCAGCTCGTACTGCTGTTTC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CATCACAAAGTCATACACCACGATAGGGCGCAG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	AGCACCAACAAACGCAGAATCTTGCTGCTCCT
GAACGAATACCACCCCTGAATTCAAAGGGATGAAGAC

>NZ_CP019240|4|4|1623234-1623967|CRISPRCasFinder
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	ATAGATTTCGTTTTGAGTTCATCAGGTACAG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	TGCGCTGCTGCTGCGCGTTCTTTGCGTATCGC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	GGCAGTTTCGAGTTCATCGTTCTTTTTATCCAAC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CCGAAGTCGCCTCTTGATGCTCACCCGCGCC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	TTTTTGCCCTCATAGGTTTCGATGTGAATCTCG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	GTCCAACATAGCGACAATGTCGCCGCGTCCGATA
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	ATACCTGCCTGAATCAGTGCGTTTTCCGCCGTAC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CTCTGAAGACTGTTCAGCTCGTACTGCTGTTTC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CATCACAAAGTCATACACCACGATAGGGCGCAG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	AGCACCAACAAACGCAGAATCTTGCTGCTCCT
GAACGAATACCACCCCTGAATTCAAAGGGATGAAGAC

>NZ_CP019240|4|2|1623234-1623967|CRT
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	ATAGATTTCGTTTTGAGTTCATCAGGTACAG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	TGCGCTGCTGCTGCGCGTTCTTTGCGTATCGC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	GGCAGTTTCGAGTTCATCGTTCTTTTTATCCAAC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CCGAAGTCGCCTCTTGATGCTCACCCGCGCC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	TTTTTGCCCTCATAGGTTTCGATGTGAATCTCG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	GTCCAACATAGCGACAATGTCGCCGCGTCCGATA
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	ATACCTGCCTGAATCAGTGCGTTTTCCGCCGTAC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CTCTGAAGACTGTTCAGCTCGTACTGCTGTTTC
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	CATCACAAAGTCATACACCACGATAGGGCGCAG
GAACGAATACCAGCCCTGAATTCAAAGGGATTAAGAC	AGCACCAACAAACGCAGAATCTTGCTGCTCCT
GAACGAATACCACCCCTGAATTCAAAGGGATGAAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019240.1\|WP_075586954.1\|1629570_1630224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075586945.1\|1619408_1620407_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|187890
NZ_CP019240.1\|WP_075586941.1\|1616305_1617493_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_CP019240.1\|WP_075586942.1\|1617489_1617894_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075587247.1\|1621064_1622072_+\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NZ_CP019240.1\|WP_075586950.1\|1627433_1627808_-\|HTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|238042
NZ_CP019240.1\|WP_075586940.1\|1615909_1616302_+\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	gnl\|CDD\|378242
NZ_CP019240.1\|WP_075586955.1\|1630269_1630770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075586947.1\|1622850_1623150_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_CP019240.1\|WP_075586956.1\|1630766_1631057_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224583
NZ_CP019240.1\|WP_075586948.1\|1624086_1626183_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|236864
NZ_CP019240.1\|WP_075586946.1\|1622068_1622854_+\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NZ_CP019240.1\|WP_075587246.1\|1620560_1620845_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP019240.1\|WP_075586952.1\|1628439_1629177_+\|class-I-SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223934
NZ_CP019240.1\|WP_139313380.1\|1629338_1629560_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075586957.1\|1631053_1631572_+\|DUF86-domain-containing-protein	unknown	unknown	gnl\|CDD\|225236
NZ_CP019240.1\|WP_075586949.1\|1626243_1627419_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|180843
NZ_CP019240.1\|WP_075586944.1\|1618205_1619396_+\|DUF1887-family-protein	csx1	pfam09002_csx1_CAS-III	gnl\|CDD\|312526
NZ_CP019240.1\|WP_075586943.1\|1617890_1618199_+\|CRISPR-associated-protein-Csx16	csx16	pfam09652_csx16_CAS-I:CAS-III	gnl\|CDD\|370601
NZ_CP019240.1\|WP_075586951.1\|1627804_1628137_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019240.1\|WP_075586956.1\|1630766_1631057_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	1.39363e-23
NZ_CP019240.1\|WP_075586945.1\|1619408_1620407_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|187890	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex.	1.45515e-06
NZ_CP019240.1\|WP_075586941.1\|1616305_1617493_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	4.56356e-34
NZ_CP019240.1\|WP_075586948.1\|1624086_1626183_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|236864	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ.	1.1483e-140
NZ_CP019240.1\|WP_075587247.1\|1621064_1622072_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	2.74197e-81
NZ_CP019240.1\|WP_075586950.1\|1627433_1627808_-\|HTH-domain-containing-protein	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	5.25179e-05
NZ_CP019240.1\|WP_075586940.1\|1615909_1616302_+\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	1.00336e-26
NZ_CP019240.1\|WP_075586949.1\|1626243_1627419_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|180843	PRK07108, PRK07108, acetyl-CoA C-acyltransferase.	0
NZ_CP019240.1\|WP_075586946.1\|1622068_1622854_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.6846e-08
NZ_CP019240.1\|WP_075587246.1\|1620560_1620845_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	8.64851e-09
NZ_CP019240.1\|WP_075586947.1\|1622850_1623150_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	8.92265e-18
NZ_CP019240.1\|WP_075586957.1\|1631053_1631572_+\|DUF86-domain-containing-protein	gnl\|CDD\|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	7.73503e-29
NZ_CP019240.1\|WP_075586952.1\|1628439_1629177_+\|class-I-SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223934	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms].	2.35098e-05
NZ_CP019240.1\|WP_075586944.1\|1618205_1619396_+\|DUF1887-family-protein	gnl\|CDD\|312526	pfam09002, DUF1887, Domain of unknown function (DUF1887). This domain is found in a set of hypothetical bacterial proteins.	2.8385e-75
NZ_CP019240.1\|WP_075586943.1\|1617890_1618199_+\|CRISPR-associated-protein-Csx16	gnl\|CDD\|370601	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548). This entry represents a conserved region of about 95 amino acids found exclusively in species with CRISPRs (Clustered Regularly Interspaced Short Palindromic Repeats). In all bacterial species that contain this entry, the genes encoding the proteins are in the midst of a cluster of cas (CRISPR-associated) genes.	1.09579e-40

>NZ_CP019240.1|WP_075586947.1|1622850_1623150_+|CRISPR-associated-endonuclease-Cas2
MSQHATAQWLVTYDIADPRRLSRLFKYLKKNGVPVQYSVFLVEASAIRMAAMMVQIDSIIHPQADDVRAYCLPDTLWQATLGKSILPADTLPGNDFLLR
>NZ_CP019240.1|WP_075586946.1|1622068_1622854_+|CRISPR-associated-endonuclease-Cas1
MKTAVSTRAIKPGPGARCLYLGSREHKRVSCTAEALVVTNASAQTLRYPVARVARVVSSADVVDWSGPALALCMRAGIGITWLDSRGQAVGSIYPQTRSTASLATVLELWSEREDGPERYQNWLKRCRMDILVRWRESQLDSVSPQQWESTKREWVYNQTFAVHLPTTLRSLCLAYVASQLASYGLTPQLWGPRIENIDLDEDLCELLWAEMNLATGALADNAAGAAAVTALFERWTARNASALTVHLACLHRTALKAMHQ
>NZ_CP019240.1|WP_075587247.1|1621064_1622072_+|CRISPR-associated-endonuclease-Cas1
MALLLLDRAQLDIKSEGETLALYEAGVRRGTVPIKLIDRCVIHGAQTRLDSGVLIKLAQAGATTVLMSPRGVRRVALVLGPQHNDAAVRLAQSQHVLDDKACCQWAHALVRAKLQRQQRTLKTLQTARPDARKPLFDALHTVNTIRAQLGTATDIGPAAPPTLASLRGYEGAAARAYFAGLSSVFAPALNFTGRNRRPPRDPVNVCLSLSYSMAHVLAVQACVTAGLDPLLGFYHRPAFGRESLASDLIEPLRPAIDLWVWELLRSRTLREEHFSQDKGACLLGKAGRAIYYAEFEKSSAPWRRWLRGQTQALARNLRQVGELWLGDAEQDEEAT
>NZ_CP019240.1|WP_075587246.1|1620560_1620845_+|CRISPR-associated-endonuclease-Cas2
MPHRDLYLACYDISEPRRLIAALKLTRAYATGGQKSVHEIFLTPAERGNLLDDMAVLIDLATDRFMLLRLDPRNKVHTLGKALKPVDPDYFYVG
>NZ_CP019240.1|WP_075586945.1|1619408_1620407_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MFTRPLPIARYRFTAIVQQPLQLPDFAGSLLRGQFGAALRSVACMTRAPACPGCPLIQTCPYSRIFEAPPPPKGQHTLQDFSQIPKPYIIEPPTPGARLLAAGEPLVFNLVLVGHAIDQLALVVFALQRMLAQGLTRQRVPADLVQVDWLATEADSAQTIWTASQPTLAAHAASLNHLNSKSIATSAVSTGATGQNDVKIALNIQTPLRLQHQGKPLGVGQLTPRALVAAIARRTALLMEFHTGQSGWGEAARAITHLSETLSDTQDLHWFDWTRYSSRQQQEMTLGGVLGTWTLHGSAEALAQIEPWLWLGQWLHVGKNATMGQGCYTLNS
>NZ_CP019240.1|WP_075586944.1|1618205_1619396_+|DUF1887-family-protein
MSPYTTHLCLVSAQATPNLLPVLDDVWRPKKVVLACSAQMKTAAQGLRSVIQTKCPGLVVETLELPNAYDYAALSDTFLSYLADHADDNIALNVTGGTKLMAVAAQEVFRSAGKPVFYVNVESDEVLVIGEQAKSQPLRAKLKVHEMLRAHGYSVTTQEQPQITRELRDLTARLIDHVASAGQALGTINAIARMARDAPGLRVDLTPAQYDSRSLMDIFALFADADLLRLNGPAISFKNEDARFFVNGGWLEAHVYEALQSLRTQHESLTDVAMGVRVAFGGADPRAAAKNRDKNEIDVAFLYRNTLHLIECKTANLAQGGKGDDSKATEALYKMESLLKLGGLRTRGMVVDYRGQLSQSEADRQRAAEAGIAIVSGAQLKDLKGAISRLWLAKRD
>NZ_CP019240.1|WP_075586943.1|1617890_1618199_+|CRISPR-associated-protein-Csx16
MTTWFISRHPGAIDWGNRQNLLIDRFEPHLDLVLIQGGDIVIGSLPVDLAAQVCARDAAYWHLSLALPFELRGVELNADDLERLGAKIEPFEIKPALTATNR
>NZ_CP019240.1|WP_075586942.1|1617489_1617894_+|hypothetical-protein
MSDVKPGADALIPEPDSASFEPYPHLTDAQHDLFDRMSEISEDCFCAGWIHDNEYSIWRVIALGDTSTGYPPMNPRLVRRCKQLANEIGGWIQWTVDGPQFAPMAHWLAMVAQHNDAGNAGSPAFKTTGTSIAP
>NZ_CP019240.1|WP_075586941.1|1616305_1617493_+|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MIPDLIAALPDHIPALFADAAPGHKFHLYFTHWEAGRFTPYKDARLPDIKHFEKPERERIRREFEARKRRALGNVCPLGDSAKAQITAIRTRQQALIKHYGTNGYHISTKSTAPFATGLGNEHPIENGFAFLTPYGLPYLAGSGVKGILRRAMQELSKDGVYGFTDETINTLFGPEKIDKPEDAQRGALDFWDVFPSPAGGKLVVEIMTPHFGEYYRGNQTPHDSGAPVPVSFLAVPAKSDFDFSVVCQPQRLPEALQTQWRRLLDQAFAHAFEWVGFGAKTSVGYGAMAAAKAAPPVVTTSGSGQSAVHTGASSTNLQTWPAAKLTLNPSTGEIVASFEGRSTTPLKNPLANELRSALGEERAAKLKKNKELKGVSVDVEPLGNALALKRLTPS
>NZ_CP019240.1|WP_075586940.1|1615909_1616302_+|type-III-B-CRISPR-module-associated-protein-Cmr5
MAQTLDQQRAGLAWGYATNSRKLQGDLSDKYRNLAKGAPALIMNSGLMPTLAFYNSKSKAHEEVAESALLADLMTGMIQRLAPQPAPRDFATFMTMLQKCESRDYLRFTDEALELLKWLRQFVDAVKSKD
>NZ_CP019240.1|WP_075586948.1|1624086_1626183_+|enoyl-CoA-hydratase/isomerase-family-protein
MSVDYTVQGQVAVLTLNNPPVNGLGLATRVALTNGLARALADEAVVAIVISGAGRAFSGGADITEFGSPKAFQEPNLLSVILAVEAATKPLIAAVHSVCMGGGLELALGCHYRIAAPGCQVALPEVKLGLLPGAGGTQRLPRVIGVEPALNMIVGGTPVKSEQLFALPGQKLFDKLVQSSESLLAEALAFAAEVANARPLPLVRQLPCSHPQGDGYFQFARNRVKGMAKHFPAPLKCVDAVQAATRHKFADGMAFERDTFLNLMWTPEHRALKHLFLAERAAPKVPDVPADTALRAIKSVAVVGAGTMGGGMAVAFLNAGLPVKLLEAQPEALARGVATIRQSYESQVKKGKLKPDKLEQRLSLLTTTLRYDDLHDADLVIEAVFEDMGVKEAVFRELDRVMKPGAILASNTSTLDLNHIAAMTQRPQDVVGLHFFSPANVMQLLEVVRGAQTATDVLTSVLALAKKIKKTAVVSGVCDGFIGNRMVEHYLRQAGFLLDEGCTPAQVDRAMETFGFAMGPFRMSDLSGNDIGWAVRKRRAVEKPGFKFSQTADLLCEQGRFGQKTGAGWYDYVPGKRDALPSAWVTQMIDAHRASLGLTPRKITDEEIVQRLVFALVNEGARILEDGIANKSSDIDIVYIYGYGFPVHRGGPMAYANEVGLFNVVAAMQRFAQNPLDDAAFWQPAALLQRLVLEGKTI
>NZ_CP019240.1|WP_075586949.1|1626243_1627419_+|acetyl-CoA-C-acyltransferase
MTQAVIVSTARTPLTKSWKGAFNMTHGATLGGHAVQHAIHRAGLEAAEVEDVMMGCAFPEGATGNNIARQIALRAGCPVSVPGITINRFCSSGLQSMVLAAQRIVAGEGDVYVAGGLESISCVQQEMNLHMITDAWLVKNKPELYWTMLQTAETVATRYGISREAMDEYGAASQQRATDALAAGLFTAEIAPITVTMGVADKALGLITKEVTVSQDEGIRPGTTYEGIKDLRSALPGGLVSAGNASQFSDGAGAVVVMHEAMAQRRGLQPLGRFLGFAAAGCEPDEMGIGPVFAVPKVLAKLGLSVGDIDLWELNEAFAVQVIYCRDKLGIDPARLNVNGGAIAVGHPYGMSGQRLTGHALIEGKRRGAKRVAVTMCIGGGMGACGVFEVL
>NZ_CP019240.1|WP_075586950.1|1627433_1627808_-|HTH-domain-containing-protein
MSKVSVRTDDVAGFFNRAKHAARRADQRQAFEGSVTLSFEDPQQMFTVLSESRRQLMLEIMVEPKTINDLTTRLNRNRSSITKDVGLLEKMGLIVSTRQSNPGHGIQKMVQAIAPKIEMVATLG
>NZ_CP019240.1|WP_075586951.1|1627804_1628137_-|hypothetical-protein
MAKATKNILLEQERFELKSKSGGGLLCYEVWGYQEKGLTVVTRYNLAYINHAMFQGDNGRVLGFDNAHDYHHRHYMGEVTAVDFTSDEATSERFQQEWVEIIKLNRGETS
>NZ_CP019240.1|WP_075586952.1|1628439_1629177_+|class-I-SAM-dependent-DNA-methyltransferase
MPTLSILDVTELRNAANLNWSAIDVSIFGTLFERGLDPAKRSQLGAHYTDTATIDRIIDPVLRRPLLQKWELVAQAIQGLQAKSTQRRRAAYCAGGRSFKASPGDAAFQKAEQLFVGWLDELKNYRILDPACGSGNFLFLGLKALKDIEHQSHLEAAALGLDREADLVTGPHNVLGIELNEYAAELARVKVWIGELQWRMAHGYKFKTNPVLQPLTPFQKRQPGKPALNPVRGRRRRQSLIRFAF
>NZ_CP019240.1|WP_139313380.1|1629338_1629560_+|hypothetical-protein
MGSDPISAGSVKSTPSNQVTEAPWPRANIVIGNPPFLGGSKKRRELGDAYFDALNTVFSGRVPGGADSGLLLV
>NZ_CP019240.1|WP_075586954.1|1629570_1630224_+|hypothetical-protein
MAIESGGLEAPGLVAKQAIRAGANREVLTALCATTHIFNAWADEQWINDGAAERVSLVCFGTGGLAIQLNGQPVPHINADLTGVLGLDMTQAKALPENAGGSFEGTKKYGDFDVPGLLARQWLALPNPPWQVQCSGGQTFPFPLGLTPLVTAHQQTETLPNGAIIPLLTDFHIENVPQALTDKAQVATKTKAKTAACTSAAEVGVARMSGAPSNGEA
>NZ_CP019240.1|WP_075586955.1|1630269_1630770_+|hypothetical-protein
MQASESPSSTSTQNQPAALVNQAPEAIKKAALSTTRRHAECIATAAKRLSDLREAWLNPPEWTHRVPEVVPLGMTTSPYPDRIEPRPGIREADFKALQKRTLTNLYNLRPAWLTMAHQQLDLAVANAYGWADYSPAMPDDEVLKRLLAMNLAHSVTISGQLEPQKP
>NZ_CP019240.1|WP_075586956.1|1630766_1631057_+|nucleotidyltransferase-family-protein
MKPSVSLDLQPHAVGAAAKRYQTTNARVFGSVLRGDDAQGSDLDLLVDPLPGATLFDLGGLQFELKTLLGVPVDVLTPGDLPLKFRAQALSEARPV
>NZ_CP019240.1|WP_075586957.1|1631053_1631572_+|DUF86-domain-containing-protein
MNSSRIADYLEHMLEAALLACSYVEGLAREDFEQDKRTQQAVNLNLIILAEEATKVLKDNEAFANSHPQIPWRSMKGERTQMAHGYYEINLDTVWQTVQTALPGLIEIYQRCAKRFAERFVFRPLLATEIFIGDSPKCSHTSLCGNSKTTPKARTRPPIWPAPKRCSNPARV

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Crispr_ID: NZ_CP019240_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019240_5

3652317-3652422

Orphan

Consensus_repeat	Method
TCATCAACCTGAAAGGTAAACACCATGACCCACGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019240_5

>merge|NZ_CP019240|5|3652317-3652422|CRISPRCasFinder
TCATCAACCTGAAAGGTAAACACCATGACCCACGCCGCCGCGTAGTGCTCAATGGCACCAATTTAAACCGTCATCAACCTGAAAGGTAAACACCATGACCCACGCC

>NZ_CP019240|5|5|3652317-3652422|CRISPRCasFinder
TCATCAACCTGAAAGGTAAACACCATGACCCACGCC	GCCGCGTAGTGCTCAATGGCACCAATTTAAACCG
TCATCAACCTGAAAGGTAAACACCATGACCCACGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019240.1\|WP_075585338.1\|3657460_3659353_-\|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl\|CDD\|235256
NZ_CP019240.1\|WP_075585337.1\|3656118_3657198_-\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|236406
NZ_CP019240.1\|WP_075585330.1\|3648507_3648792_-\|DUF2249-domain-containing-protein	unknown	unknown	gnl\|CDD\|226759
NZ_CP019240.1\|WP_075585326.1\|3646431_3646878_+\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|274650
NZ_CP019240.1\|WP_075585569.1\|3645274_3646345_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_CP019240.1\|WP_139313288.1\|3647012_3647294_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224565
NZ_CP019240.1\|WP_075585336.1\|3654372_3656034_+\|putative-transporter	unknown	unknown	gnl\|CDD\|179654
NZ_CP019240.1\|WP_075585333.1\|3650641_3651883_+\|phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|236985
NZ_CP019240.1\|WP_075585341.1\|3661252_3661561_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|225109
NZ_CP019240.1\|WP_075585342.1\|3663582_3663966_-\|response-regulator	unknown	unknown	gnl\|CDD\|381085
NZ_CP019240.1\|WP_075585339.1\|3659454_3660885_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_CP019240.1\|WP_075585571.1\|3662014_3663541_-\|cache-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP019240.1\|WP_083633766.1\|3651840_3652281_+\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376622
NZ_CP019240.1\|WP_158025676.1\|3653520_3653940_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381683
NZ_CP019240.1\|WP_075585332.1\|3650120_3650645_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP019240.1\|WP_075585340.1\|3661038_3661251_+\|response-regulator	unknown	unknown	gnl\|CDD\|381093
NZ_CP019240.1\|WP_075585331.1\|3648955_3650083_+\|NnrS-family-protein	unknown	unknown	gnl\|CDD\|377571
NZ_CP019240.1\|WP_083633768.1\|3664101_3664470_-\|Hpt-domain-containing-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_083633765.1\|3643469_3643976_+\|threonine/serine-exporter-family-protein	unknown	unknown	gnl\|CDD\|378960
NZ_CP019240.1\|WP_076072305.1\|3644131_3645052_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571

Protein	Function_ID	Function_description	E-value
NZ_CP019240.1\|WP_075585338.1\|3657460_3659353_-\|phosphoenolpyruvate-carboxykinase-(GTP)	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NZ_CP019240.1\|WP_075585337.1\|3656118_3657198_-\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|236406	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional.	0
NZ_CP019240.1\|WP_075585330.1\|3648507_3648792_-\|DUF2249-domain-containing-protein	gnl\|CDD\|226759	COG4309, COG4309, Uncharacterized conserved protein [Function unknown].	1.55097e-25
NZ_CP019240.1\|WP_075585326.1\|3646431_3646878_+\|OsmC-family-protein	gnl\|CDD\|274650	TIGR03562, osmo_induc_OsmC, peroxiredoxin, OsmC subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein OsmC, or osmotically induced protein C. The member from Thermus thermophilus was shown to have hydroperoxide peroxidase activity. In many species, this protein is induced by stress and helps resist oxidative stress. [Cellular processes, Detoxification].	1.43218e-63
NZ_CP019240.1\|WP_075585569.1\|3645274_3646345_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	1.8441e-15
NZ_CP019240.1\|WP_139313288.1\|3647012_3647294_+\|hypothetical-protein	gnl\|CDD\|224565	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones].	9.75977e-05
NZ_CP019240.1\|WP_075585336.1\|3654372_3656034_+\|putative-transporter	gnl\|CDD\|179654	PRK03818, PRK03818, putative transporter; Validated.	0
NZ_CP019240.1\|WP_075585333.1\|3650641_3651883_+\|phosphoglycerate-dehydrogenase	gnl\|CDD\|236985	PRK11790, PRK11790, phosphoglycerate dehydrogenase.	0
NZ_CP019240.1\|WP_075585341.1\|3661252_3661561_+\|GGDEF-domain-containing-protein	gnl\|CDD\|225109	COG2199, COG2199, c-di-GMP synthetase (diguanylate cyclase, GGDEF domain) [Signal transduction mechanisms].	2.41931e-06
NZ_CP019240.1\|WP_075585342.1\|3663582_3663966_-\|response-regulator	gnl\|CDD\|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	4.85963e-28
NZ_CP019240.1\|WP_075585339.1\|3659454_3660885_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP019240.1\|WP_075585571.1\|3662014_3663541_-\|cache-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	2.42812e-50
NZ_CP019240.1\|WP_083633766.1\|3651840_3652281_+\|hemerythrin-domain-containing-protein	gnl\|CDD\|376622	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain. Iteration of the HHE family found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain in fact consists of two cation binding domains. Members of this family occur all across nature and are involved in a variety of processes. For instance, in Nereis diversicolor hemerythrin binds Cadmium so as to protect the organism from toxicity. However Hemerythrin is classically described as Oxygen-binding through two attached Fe2+ ions. And the bacterial NorA is a regulator of response to NO, which suggests yet another set-up for its metal ligands. In Staphylococcus aureus the iron-sulfur cluster repair protein ScdA has been noted to be important when the organism switches to living in environments with low oxygen concentrations; perhaps this protein acts as an oxygen store or scavenger.	0.000165341
NZ_CP019240.1\|WP_158025676.1\|3653520_3653940_+\|hypothetical-protein	gnl\|CDD\|381683	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil may arise from mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations; thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other. UDG family 1 is the most efficient uracil-DNA glycosylase (UDG, also known as UNG) and shows a specificity for uracil in DNA. UDG family 2 includes thymine DNA glycosylase which removes uracil and thymine from G:U and G:T mismatches, and mismatch-specific uracil DNA glycosylase (MUG) which in Escherichia coli is highly specific to G:U mismatches but also repairs G:T mismatches at high enzyme concentration. UDG family 3 includes Human SMUG1 which can remove uracil and its oxidized pyrimidine derivatives from, single-stranded DNA and double-stranded DNA with a preference for single-stranded DNA. Pedobacter heparinus SMUG2, which is UDG family 3 SMUG1-like, displays catalytic activities towards DNA containing uracil or hypoxanthine/xanthine. UDG family 4 includes Thermotoga maritima TTUDGA, a robust UDG which like family 1, acts on double-stranded and single-stranded uracil-containing DNA. UDG family 5 (UDGb) includes Thermus thermophilus HB8 TTUDGB which acts on double-stranded uracil-containing DNA; it is a hypoxanthine DNA glycosylase acting on double-stranded hypoxanthine-containing DNA except for the C/I base pair, as well as a xanthine DNA glycosylase which acts on both double-stranded and single-stranded xanthine-containing DNA. UDG family 6 hypoxanthine-DNA glycosylase lacks any detectable UDG activity; it excises hypoxanthine. Other UDG families include one represented by Bradyrhizobium diazoefficiens Blr0248 which prefers single-stranded DNA and removes uracil, 5-hydroxymethyl-uracil or xanthine from it.	2.07911e-54
NZ_CP019240.1\|WP_075585332.1\|3650120_3650645_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	1.19256e-37
NZ_CP019240.1\|WP_075585340.1\|3661038_3661251_+\|response-regulator	gnl\|CDD\|381093	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains. PleD contains a REC domain (D1) with the phosphorylatable aspartate, a REC-like adaptor domain (D2), and the enzymatic diguanylate cyclase (DGC) domain, also called the GGDEF domain according to a conserved sequence motif, as its output domain. The GGDEF-containing PleD response regulators are global regulators of cell metabolism in some important human pathogens. This model describes D1 of PleD and similar domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.60125e-08
NZ_CP019240.1\|WP_075585331.1\|3648955_3650083_+\|NnrS-family-protein	gnl\|CDD\|377571	pfam05940, NnrS, NnrS protein. This family consists of several bacterial NnrS like proteins. NnrS is a putative heme-Cu protein (NnrS) and a member of the short-chain dehydrogenase family. Expression of nnrS is dependent on the transcriptional regulator NnrR, which also regulates expression of genes required for the reduction of nitrite to nitrous oxide, including nirK and nor. NnrS is a haem- and copper-containing membrane protein. Genes encoding putative orthologues of NnrS are sometimes but not always found in bacteria encoding nitrite and/or nitric oxide reductase.	2.10094e-61
NZ_CP019240.1\|WP_083633765.1\|3643469_3643976_+\|threonine/serine-exporter-family-protein	gnl\|CDD\|378960	pfam12821, ThrE_2, Threonine/Serine exporter, ThrE. ThrE_2 is a family of membrane proteins involved in the export of threonine and serine. L-threonine, L-serine are both substrates for the exporter. The exporter exhibits nine-ten predicted transmembrane-spanning helices with long charged C and N termini and an amphipathic helix present within the N-terminus. L-Threonine can be made by the amino acid-producing bacterium Corynebacterium glutamicum, but the potential for amino acid formation can be considerably improved by reducing its intracellular degradation into glycine and increasing its export by this exporter. Members of the family are found in Bacteria, Archaea, and the fungal kingdoms, and the family can exist either as a single long polypeptide chain or as two short polypeptides. All family members show an extended hydrophilic N-terminal domain with weak sequence similarity to portions of hydrolases (proteases, peptidases, and glycosidases); this suggests that since this region is cytoplasmic to the membrane it may be generating the transport substrate, so may imply that threonine may not be the primary substrate and the ThrE has a subsidiary function.	6.52722e-24
NZ_CP019240.1\|WP_076072305.1\|3644131_3645052_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0

>NZ_CP019240.1|WP_083633766.1|3651840_3652281_+|hemerythrin-domain-containing-protein
MQRAWHHPLPNFVLSAAIQRAVTLKGLSLEHHEALVLARRARATATNPHSDTARAQRHHLLERWAQQFAPHFALEEQTLFPALARAGHTEVAAEALMQHVALRELVARLRQDDALALAAWGDALDIHVRFEECTVFPLAQAVLDPA
>NZ_CP019240.1|WP_075585333.1|3650641_3651883_+|phosphoglycerate-dehydrogenase
MTQSSIDLPQQKATLKAVLLEGIHPSAAEVLKQGGYTNIVTHAKALTGAELQAALNGAHFAGIRSCTQLTAEVLAQAPQLAAIGCFCIGTNQVDLKAAMRLGIAVFNAPFSNTRSVAELVLAEIIMLMRGIPEKNAVLHRGGWIKSAAHSYEVRGKTLGIIGYGHIGTQVGVLAEQLGMRVVFNDIEAKLSLGNAREAASLNELLAASDVVSLHVPETPQTYQLIGAKALATMKPGSHLINASRGTVVDIDALTAALESHHLHGAAIDVFPLEPQGNDAVFTSPLMRFDNVILTPHIGGSTSEAQVNIGTEVAAKLVRYGNNGSTTSAVNFPEVALPAHTSRSRLLHIHHNVPGVLAQVNERLSAAGINIAAQYLSTFEELGYVVIDVDSAASQSALDELCNVPGTIRCRILY
>NZ_CP019240.1|WP_075585332.1|3650120_3650645_+|Rrf2-family-transcriptional-regulator
MRLTTMTDYAMRLLMYVAQQQDRLCTIAEIAKVYDISEAHLMKVTHQLGLNGWLETVRGKGGGMRLAAAPADINLGAVVRSIEPDFYLVDCLNPDTVCSLTGYCKLTGIMSGALQNMMQYLDGYTLADLLPPKSPARAAHTPLLPLSGSLLGTPLVNRQGLHSLTSKLPHKRLP
>NZ_CP019240.1|WP_075585331.1|3648955_3650083_+|NnrS-family-protein
MKAFLELAFRPLYLAGVGWALVSIALWIYAPFSLTAPLGGSVWHAHEMLWGFIATIALGFLMTAGTNWTGITPMTGKVVALACVLWAVARVGFLVPLESAFWVAMVSEMAFFALGAGAMLRAVVISKSTRNYAIPGLLAGLGATDALFLLSARDGDYLQLMQNFNAALLVMALLALLIGRRVIAFFAMTAVHSLSIPKHMETGWVQLGACAVGLVSLLAGFPVLTAAALGLAGVLALVQLISWKPLAVRANALLWILYVGYAGIGIGLLFAALQYAGVDLPRVLPVHTIAMAGFSVLILGMVTRTALGHTGRPLATDRSIRSSYWLMLLAVALRLAAIADTPASATLLLMAGAAWVASLALYLWQFTPMLIRPRN
>NZ_CP019240.1|WP_075585330.1|3648507_3648792_-|DUF2249-domain-containing-protein
MTQTGQAIQVNTRSMAPKERRSLVFGKFDQLGVNATMELINDQDPVTLRSQFELEKPNLFSWETLESGPEVWRVAVTKLKTKHGAGHCCGACGG
>NZ_CP019240.1|WP_139313288.1|3647012_3647294_+|hypothetical-protein
MKQQLDVVFGEHLRFVFRHFPLVEVRPNAEMADRIYKQRVQEHRSAGQLSGVRSAPSFFLNGTPVDVSFGFEKLDEAIRVALDTTPHVDTASP
>NZ_CP019240.1|WP_075585326.1|3646431_3646878_+|OsmC-family-protein
MNEKTASVHWEGQGKKGQGQISTETEALKAYPYGFASRFEDDRRGTNPEEILGAAHAACFTMAFSFACDAAGFTTALVDTEARVRLIPEGDGFVIDRIALTLKASVPGIDETRFQEIALDAKNGCPLSKALASVAEISLQATLVQSAT
>NZ_CP019240.1|WP_075585569.1|3645274_3646345_+|flavodoxin-family-protein
MIEIRKGQASEKLSRQAFGERYRGSFVDPAFATEEAAIARLEVIAWLAYDEGRKAPLTRPAGAGYFDPTDALSVQWLATRQAIDQAQLACGNPATKSRVLLVCGSARNDGTCPGEVSKTWRLTEIAQQVVQQAGVEADVLDLSLVTSEYGRNIHPCKGCVSSAMPLCHWPCSCYPNHSLAQTHDWMAQIYERWVAAHAVILLAPTYWYQSPSPLKLMIDRLVCADGGNPDPTTTHGKRVLEAKRLEEQGWDYPKHLAGRVFGVVVHGEVAGVEDHRRNLCDWLEWMGLTDAGAVAKLDRYIGYYEPYYNSHEALDKDSAVQEEVRNVTQAVLNAVHALRAGRLSQPDKQIKSLRQK
>NZ_CP019240.1|WP_076072305.1|3644131_3645052_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MTTSTEPTVHTSSLTSLTLLARGKVRDNYAVGDDRILMVASDRISAFDVIMGQPIPGKGVLLTKMALFWFDKLGPNGLNLCPIHLTGDAPESVVTPTEVPQVVGRSMLVKRLKPIPVEAVVRGYLAGSGWKEYQDSQSVCGVPLPTGLKNASKLPEPIYTPAAKAEMGEHDENITFEKTVEMIGADLAGRIRDISIAIYKAASEIAAAKGIIIADTKFEFGLDRDGTLVLMDEVLTPDSSRYWPAESYVAGVNPPSYDKQFLRDWLETAQVSGKPWSKTPPAPHLPREVIEKTAAKYHEALTRLTT
>NZ_CP019240.1|WP_083633765.1|3643469_3643976_+|threonine/serine-exporter-family-protein
MSLLMFLENGIWLGLAAMGFAVLFNVPRRALGIIFLIAALGGLAKLAMVQQGIVGALAAFVGASLIGLLSVLAAHKRKAPPMIFAIPAVIPMIPGFFAYQAMVGMMELMIQKDPLLYSKIFFETVNNGLSALFVMLALSTGVAIPMLLSRKQTVKRLQPDDDLEVEME
>NZ_CP019240.1|WP_158025676.1|3653520_3653940_+|hypothetical-protein
MLADARSCRVCKAHLPLGPRPVLQAAPSARILVVGQAPGVRVHTSGIPWDDASGERLHAWTGLSNAHFYDASKAEIIPMGFCYFGRGRGRDGDLPPGRECAPDYLALPHPCARNSPWFQRNPWFEQEVLPALRQRVASL
>NZ_CP019240.1|WP_075585336.1|3654372_3656034_+|putative-transporter
MSDVAISTSLLALVAVLGLWLGNFEFKGIGLGIGGVLFGGLFVGHFVQSNGMVLDLHTLHFVQEFGLILFVYSIGIQVGPGFFSSLRSTGLKLNGFAALLVLLGCAVAAALHKLFDVPLPVILGIFSGAVTNTPSLGAGQQILTDLGSSAESISSMGMAYAMAYPFGICGILLSMWLVRLFFRINVDQEAHAFDEESGRSRSGLFTMNVALRNVNLDGLALKKVPGLTDGQVICSRMKRGDDLSVPRPLTTLQVGDLLHLVGSPDALRSAQLVIGEEVETSLSTHGTDMRVERIVVTNVKVIGKRISDLALAQTYDVVISRLNRAGVELVPNAQTTLQFGDILNIVGTPDAIDVVAGMMGNSKHKLQQVQMLPVFLGIGLGVLLGSLPFYLPGIPAALKLGLAGGPLVVALIVSRIGSIGRLHWFMPPSANLALRELGIVLFLAVVGLKSGGQFLETLLQGPGATWLMYGALITLIPLMIVGVLARVVGKINYLTLCGLLAGSMTDPPALAFANAMHPTNGAAALSYVTVYPLVMFMRIVAPQLMALMLWVPS
>NZ_CP019240.1|WP_075585337.1|3656118_3657198_-|class-II-fructose-bisphosphate-aldolase
MTQKILDVVQPGVVSGDDVQKIFAICKANQFALPAVNVISTDSINAVLEAAAKVKAPVVIQFSNGGAGFVAGKGLKLDGQQAAILGGISGARHIHLVAESYGVPVIVHTDHAAKKLLPWIDGLLDAGEKYFAETGKPLFSSHMLDLSEEPLKENIAICGKYLARMAKMGMTLEIELGVTGGEEDGVDNSDRDASLLYTQPEDVAYAYEELIKISHRFTIAASFGNVHGVYKPGNVKLTPKILDNSQKFVSEKYKVAANTLDFVFHGGSGSSADEIKESISYGVVKMNIDTDTQWATWAGVMAYHKKNEAYLQGQIGNPDGDDKPNKKYYDPRAWQRAGQLGMIARLEQAFEELNAVNSL
>NZ_CP019240.1|WP_075585338.1|3657460_3659353_-|phosphoenolpyruvate-carboxykinase-(GTP)
MNTETQHDATGQAPAYVTNQRLIAWVAEIAALTKPDTVYWCDGSEEEYARLCQQLVDCGTFTKLNPVKRPNSFLACSDPSDVARVEDRTFICSEKKENAGPTNNWMGPAEMRALLQTGTDGKKALFEGCMKGRTMYVIPFSMGPLGSPIAHIGIELSDSAYVAANMKIMTRMGKAVYDVLGADGAFVPCVHTVGAPLEAGQKDVTWPCNPEKYIVHYPETREIWSFGSGYGGNALLGKKCFALRIASNMARDEGWLAEHMMILGATNPQGKKHYVAAAFPSACGKTNFAMLVPPAGFEGWSITTVGDDIAWIKPGADGKLYAINPEAGYFGVAPGTNMLTNPNCMLCLDKDVIYTNVALTDDGDVWWEGMEYDVPGKALPAHLIDWKGNDWTPEIAKATGAKAAHPNSRFTVSALNNPALDPEWDNPAGVPIDAFMFGGRRATTVPLVTEARSWVEGVYMAATMGSETTAAAVGKSGVVRRDPFAMLPFTGYNMSDYFQHWLTLGAKLEATGATLPKIYTTNWFRKGADGKFVWPGYGENMRVLKWILDRLDGSAPEGVEHFFGVSPQYQDLNWEGLAFTAEQFNTVISIDKAAWREEMVLHDELFEKLAYHMPQELIDKKARIKADIAA
>NZ_CP019240.1|WP_075585339.1|3659454_3660885_-|pyruvate-kinase
MSRRATKIVATLGPASSDPHLLEQMIRAGVNVVRLNFSHGKAQDHINLAQLVREAAKRAGSEVGIMADLQGPKIRVGKFAEGRVFLAQGQQFVLDAARVELGDVNGVGLDYKTLPKEVKAGDVLLLNDGLIVITVDACRGSAIFTTVKLGGELSNNKGINKQGGGLSAPALTAKDMDDIRTAMGFKADYVAVSFPKNAADMEMARQLCNVASDGGHQPALIAKIERAEAIPHLEEILLASDGIMVARGDLAVEVGNAMVPALQKRMIKLARELDRVVITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMLSAETAAGRYPLETVIEMAKICHVAEGGEDFTLEADFTGKTFTRIPYAVSMGALFTAHHLGAKAIVALTESGSSARWMSRHLTRVPIYAMTSHIATQRRMTLYRNVRPLLIDASMDRDTALAQAERDLKALNFVESGDVYVITCGEPMGAPDGANMLKICRVV
>NZ_CP019240.1|WP_075585340.1|3661038_3661251_+|response-regulator
MPQDQNTLSTLMDAAAIRERSLVVDDQPVNIQVMHQIFADQHQVVMATGGQQARDFCHRSPPERVLLDIV
>NZ_CP019240.1|WP_075585341.1|3661252_3661561_+|GGDEF-domain-containing-protein
MARAVRAHTPLSLITLNVDFFKRFNIHYDHEAGADWLRQVAQTQKDASLSSELHTALANNRTVIERGAAAYEQQGPDQTTAPATRANQSDNAGNADSALLRE
>NZ_CP019240.1|WP_075585571.1|3662014_3663541_-|cache-domain-containing-protein
MNLLLPAIALLRPLSGRVRFWVLPIPMILVLLTMVVMSWMQTVAPDREGAIFALVALAGLALWLYFQFAYFSITRTERDRMDRAMTEVSHGNLAQQVSSNVQTLGNFGRHLELMITNMSSMVANIRTAAVLLGDTGKKLVDDTRSLAERARAQGQHLQQTSVHVKHVSETVSRNAQAAQEVSMMTASLHKEADNAGMMMNEAMQSMGPLEVTSKRMSEIIGVIDGIAFQTNLLALNAAVEAARAGEQGRGFAVVAAEVRNLAKRSQGAAAEIRGLIAESSSRVGVTVNGIKQVNETMESLISGIGEIAMNVNVMAEGSASQSAALEEVVHAVGDLDVLTHENTALVSRAAGNSDRLINQASTLEISVGDIRLRQGTADQARQLVFDAMVHLGRVGYQQAVRDFHDKSGPFIDRDMYIFIFDRRGIYQVHGALPEKDNTDLRVIPGLDADKLVADAWEVCDQEQGGWVNYVITNPVTRETQAKTSYVVPLDGQHLLGCGCYLNSQWLNA
>NZ_CP019240.1|WP_075585342.1|3663582_3663966_-|response-regulator
MKFTLARVLVVDDDQVMRTFVVNSLRRLGIHAIETAQDGGSALRAMVSFKPDLVLTDIHMQPMNGIEFVQQLRKHANPLIKKMKVIFMSADASTETLEQALPLGTFGYIVKPPSPEILQAKLKLALK
>NZ_CP019240.1|WP_083633768.1|3664101_3664470_-|Hpt-domain-containing-protein
MNSPFISNPVATRLDVARGADMMGSEAALRNILATVLVSLSADVPSMDAALQAGDVASANRMLHALKGYVPIFGSDALIEQVVSVEKLSKTESATVVQVAYAQLGPELHGLLAEIQYFLDVG

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Crispr_ID: NZ_CP019240_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019240_6

3719462-3719592

Orphan

Consensus_repeat	Method
GGCGACGGGCCAGCGACGAGAAGCCAAACCACGCGGCAGACCCAGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019240_6

>merge|NZ_CP019240|6|3719462-3719592|CRISPRCasFinder
GGCGACGGGCCAGCGACGAGAAGCCAAACCACGCGGCAGACCCAGGCGAACAGAGCTTTAAATCGAGCCTGACCCCTTTTTTGGGCGACGGGCCAGCGACGAGAAGCCAAACCACGCGGCAGACCCAGGCG

>NZ_CP019240|6|6|3719462-3719592|CRISPRCasFinder
GGCGACGGGCCAGCGACGAGAAGCCAAACCACGCGGCAGACCCAGGCG	AACAGAGCTTTAAATCGAGCCTGACCCCTTTTTTG
GGCGACGGGCCAGCGACGAGAAGCCAAACCACGCGGCAGACCCAGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019240.1\|WP_075585384.1\|3721563_3722079_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP019240.1\|WP_075585389.1\|3728211_3729717_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP019240.1\|WP_075585585.1\|3725954_3726740_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197336
NZ_CP019240.1\|WP_075585583.1\|3725053_3725800_-\|3-oxoacyl-ACP-reductase-FabG	unknown	unknown	gnl\|CDD\|187594
NZ_CP019240.1\|WP_075585380.1\|3718071_3718449_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|227024
NZ_CP019240.1\|WP_075585388.1\|3727502_3728186_+\|DUF4124-domain-containing-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585376.1\|3716353_3716617_-\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
NZ_CP019240.1\|WP_075585386.1\|3723831_3724170_-\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377198
NZ_CP019240.1\|WP_075585385.1\|3722216_3723842_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|227122
NZ_CP019240.1\|WP_075585373.1\|3714268_3715048_+\|pilus-assembly-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585383.1\|3719967_3721554_+\|O-antigen-ligase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|371760
NZ_CP019240.1\|WP_075585377.1\|3716613_3716865_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|171099
NZ_CP019240.1\|WP_075585584.1\|3726768_3727461_+\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
NZ_CP019240.1\|WP_075585387.1\|3724179_3724899_-\|YjbE-family-putative-metal-transport-protein	unknown	unknown	gnl\|CDD\|163429
NZ_CP019240.1\|WP_075585375.1\|3715735_3716014_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_CP019240.1\|WP_075585374.1\|3715415_3715736_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585372.1\|3712495_3714178_+\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|371760
NZ_CP019240.1\|WP_075585379.1\|3717429_3717660_-\|DUF4160-domain-containing-protein	unknown	unknown	gnl\|CDD\|379344
NZ_CP019240.1\|WP_075585381.1\|3718429_3718765_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|372700
NZ_CP019240.1\|WP_075585378.1\|3716980_3717433_-\|DUF2442-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
NZ_CP019240.1\|WP_075585384.1\|3721563_3722079_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	1.011e-88
NZ_CP019240.1\|WP_075585389.1\|3728211_3729717_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP019240.1\|WP_075585583.1\|3725053_3725800_-\|3-oxoacyl-ACP-reductase-FabG	gnl\|CDD\|187594	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs. This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.03692e-112
NZ_CP019240.1\|WP_075585376.1\|3716353_3716617_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	1.48646e-41
NZ_CP019240.1\|WP_075585386.1\|3723831_3724170_-\|phage-holin-family-protein	gnl\|CDD\|377198	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV. These proteins are predicted transmembrane proteins with probably four transmembrane spans. The 1.E.40 is represented by the mycobacterial 4 phage holin, but it also contains many cyanobacterial. proteobacterial and firmicute proteins. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as in those of the bacteriophage of these organisms. The primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded the enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases.	6.00385e-23
NZ_CP019240.1\|WP_075585385.1\|3722216_3723842_+\|M48-family-metalloprotease	gnl\|CDD\|227122	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only].	3.05295e-64
NZ_CP019240.1\|WP_075585585.1\|3725954_3726740_-\|exodeoxyribonuclease-III	gnl\|CDD\|197336	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Neisseria meningitides Nape and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Neisseria meningitides Nape and NExo. Nape, found in this subfamily, is the dominant AP endonuclease. It exhibits strong AP endonuclease activity, and also exhibits 3'-5'exonuclease and 3'-deoxyribose phosphodiesterase activities.	2.34294e-127
NZ_CP019240.1\|WP_075585383.1\|3719967_3721554_+\|O-antigen-ligase-C-terminal-domain-containing-protein	gnl\|CDD\|371760	pfam11846, Wzy_C_2, Virulence factor membrane-bound polymerase, C-terminal. Wzy is a membrane-bound polymerase of 12 TMs, found in Gram-positive bacteria such as Streptococcus pnuemoniae. It forms part of the EPS or exopolysaccharide system. This family is the 6xTMs at the C-terminal end of the molecule. Wzy functions in polymerizing the oligosaccharide repeat subunits to form high-molecular-weight capsular polysaccharides. A contiguous emebrane-bound flippase, Wzx, pfam01943, transports the repeat units to the external surface of the membrane. These polysaccharides form the capsule and their differing compositions contribute to the multidudinous pneumococcal capsular serotypes, all being structurally and antigenically different.	4.58717e-33
NZ_CP019240.1\|WP_075585377.1\|3716613_3716865_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	4.6201e-18
NZ_CP019240.1\|WP_075585584.1\|3726768_3727461_+\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	6.04849e-75
NZ_CP019240.1\|WP_075585387.1\|3724179_3724899_-\|YjbE-family-putative-metal-transport-protein	gnl\|CDD\|163429	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family commonly are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains protein YjbE from Bacillus subtilis. A transport function is proposed.	3.51864e-57
NZ_CP019240.1\|WP_075585375.1\|3715735_3716014_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	6.27953e-05
NZ_CP019240.1\|WP_075585380.1\|3718071_3718449_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|227024	COG4679, COG4679, Phage-related protein [Function unknown].	1.46834e-31
NZ_CP019240.1\|WP_075585372.1\|3712495_3714178_+\|O-antigen-ligase-family-protein	gnl\|CDD\|371760	pfam11846, Wzy_C_2, Virulence factor membrane-bound polymerase, C-terminal. Wzy is a membrane-bound polymerase of 12 TMs, found in Gram-positive bacteria such as Streptococcus pnuemoniae. It forms part of the EPS or exopolysaccharide system. This family is the 6xTMs at the C-terminal end of the molecule. Wzy functions in polymerizing the oligosaccharide repeat subunits to form high-molecular-weight capsular polysaccharides. A contiguous emebrane-bound flippase, Wzx, pfam01943, transports the repeat units to the external surface of the membrane. These polysaccharides form the capsule and their differing compositions contribute to the multidudinous pneumococcal capsular serotypes, all being structurally and antigenically different.	6.30947e-24
NZ_CP019240.1\|WP_075585379.1\|3717429_3717660_-\|DUF4160-domain-containing-protein	gnl\|CDD\|379344	pfam13711, DUF4160, Domain of unknown function (DUF4160).	8.91772e-07
NZ_CP019240.1\|WP_075585381.1\|3718429_3718765_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|372700	pfam13744, HTH_37, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain.	2.65669e-27
NZ_CP019240.1\|WP_075585378.1\|3716980_3717433_-\|DUF2442-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.00985833

>NZ_CP019240.1|WP_075585381.1|3718429_3718765_+|XRE-family-transcriptional-regulator
MEKRIIDGIEIETGSGNVFADLDLPDADKLKIKSGLVIEITKAVRKLGLTQDEAARRMGITQPKVSGMLRGGFANLSERKLMDCLNRLGYDIEIKVKPAATPLGHLMLAIA
>NZ_CP019240.1|WP_075585380.1|3718071_3718449_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTLQERPLVWIGGSKKDLMLLPTQVRKFFGHALDFAQRGDQHGAAKVLKGFGGAGVLEVVENDIGGTYRAVYTVKFEDAVFVLHCFQKKSKSGIATPKEDMEIIRARLKVAEALAKELRNGKTHH
>NZ_CP019240.1|WP_075585379.1|3717429_3717660_-|DUF4160-domain-containing-protein
MLTIHRLPNMTIRVNVPDHRPPHVHVVMADRRDALVDLATLAVTSRTLRASDIAAALIWIEANRAQCVQVFKECNP
>NZ_CP019240.1|WP_075585378.1|3716980_3717433_-|DUF2442-domain-containing-protein
MIHDPQHTIKALAVRAPAGLTLTFADGATLNVDLASAIKTHPALDALGDAAVFALARVDALGGYVVWIDDDLEMAADNLRNMATEQAGGIGPERVLNWMARHNLTQERAAQAIGVSRRMLNYYLCGAKPIPKTVWLACLGWETVKELQAA
>NZ_CP019240.1|WP_075585377.1|3716613_3716865_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MNVVTYSEARSSLKAVLDRVVNDHAPTLIHRRGGNVVIVSEDAYSSMVETMYLLSNPANAAHLAMAIAQDKAGESKPQTLIEV
>NZ_CP019240.1|WP_075585376.1|3716353_3716617_-|Txe/YoeB-family-addiction-module-toxin
MRGVLFVGAVWADDVDWQGQDKKTLKRINLLIESARRTPFEGIGKPEPLLGNLSGYWSRRIDDTHRLVYRATDDNLHIVSCRHHYDA
>NZ_CP019240.1|WP_075585375.1|3715735_3716014_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MQSVANIKSISYLKSHAAQISEDLAMNGMPFVITQNGEASMVIEGVKEFQEKQALIAALKVFALGENDRLKGKGISAAQSRAQLLAVRQSRN
>NZ_CP019240.1|WP_075585374.1|3715415_3715736_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MAVVILPDAQEDLLSLQAYMLDKWGQAAWLKAEDEIFEKLEKVDTGIFNGTPVQELASVGILDYLNVITSHHKLVYRRVGRDIYVYLFAGHRQDFPTLLEKRLLSR
>NZ_CP019240.1|WP_075585373.1|3714268_3715048_+|pilus-assembly-protein
MPIPTDFFWKDRLKASGIHFGISLVIALLAAALVFGLWYPYPYREISGGRELFFIVVMVDVILGPLITFTIFNRTKPWRELRRDLAIVVLIQLGALGFGLWTVFVARPVHLVFEYDRFRVVHAVDVPAELLSRAPPDVAALPLTGPTLLSLRPFKDANEKMDATMAALGGLSLSARPDLWQPYSVAKNDIWQAAKPIADLKTRFAAQATEIDAVIAKTGRKPETLAYLPMVGRKSFWTVLLDPVTSEVLGFIPLDSFGN
>NZ_CP019240.1|WP_075585372.1|3712495_3714178_+|O-antigen-ligase-family-protein
MRISRTYALGLFFFTLSWLGYDHYRPWINFHSEWFAFLGLFGLLLSILLHQPHSVVMPKASAWIALAIGLPWLQYAVGINWFAGDALLSSLYLSGLLAAVFVGYSLARNDDAQLSYCLTGLMHSLWIAAIVSAAIGLAQWLNVDGHLGMYVVQSDPGDRAMGNLGQPNQLATLLLMGMAAFLYVYERGVIGRFTFFLGIGFLTGVLILAQSRAGMLSVVVVAGFLIWKKRTVQSRLSAKAVGGWVICFLIGVWLLPFLSEALLLSDVRSIRDASPISQRLRMWQQVAYAVAQSPWVGYGWNQTPVAHAAGAIAFPGSIPYNYAHNFVMDMLAWNGLPLGLLLCGAIAWWFVTRIRTSVRLDAVHAMACLLPLAVHSMLEYPFAYAYFLMAAGFMVGVVEAARVPTRTIMLNVRWAWGFLALSVPVGSYLTYEYFLIEEDFRTVRFESLRIGKTPAEYEIPHVWMISHLAAMLKASRLVVEPGMSTADLENLRQVSQRFAYGQMNCRYAIALGLNGQPVGARHQLAIVRGMYGDKYQAACKLEIRRLEQEKYPQLAAVLVP
>NZ_CP019240.1|WP_075585383.1|3719967_3721554_+|O-antigen-ligase-C-terminal-domain-containing-protein
MPALAVFLFVTLPWLNPFTPGPVAQVGPLLFAWVCAAGVLLAFAFDRQRGENPQIVSALTAAWAVAACLSALVGLAQYFGAASAFGVWVNHTGVGEAFGNLRQRNQFATLQNIGLFALVWLAAPALAVGARHSAAGERAFPWQSLRSPALLLGAALLGAGNAASSSRTGLLQLFLVWLLVWGWQRTAGRNAAQPRWRLTVRLAVVLTTLLAFALATFALPWLAGLDPLGSGAWARLRAGDSACASRLTLWGNVLHLIELKPWLGWGWGELDYAHFVTLYPGERFCAILDNAHNLPLHLAVELGLPAALALCGGALWLVWRGQPWREQHPTRQLAWGVLAVIGLHSLLEYPLWYGPFQMAAVLSVWLLWWVPRHSASAGSYKSFRPLALYSYALIALIIVAYCSFAAWNYYLVSQLYLPANQRANAYRENTLQKVRSAWLYQDTVRFAELTTTALTADNAAYQNALAKNMLHFSPEAKVVEVLLNSAVLLGRTDVVTFYAARYRAAFPKDDDGWMRPSSAPEAAAEAPP
>NZ_CP019240.1|WP_075585384.1|3721563_3722079_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSTLTHFDDQGQAHMVDVAAKAATHRIGVAGGRIEMLPATLALIESGSAKKGDVLGIARVAGIMAAKKTSELIPLCHPLALTRVAIEFEVLHADAIRASAVYCTATVETVGSTGVEMEALTAVQVALLTIYDMCKAVDRGMTLTDCKLLQKHGGKSGSFVAAPAAPAVLDR
>NZ_CP019240.1|WP_075585385.1|3722216_3723842_+|M48-family-metalloprotease
MKNRPLAHIFKGFTAITCVVAGGLLPGALTAQTPSANSSTPGYRNAGNSLPLLGDSSAVASAEERRLGDRIARELFRDPDYLDDPVLADYVQGVWQPLLVAARQRGELTPELDERFAWQILLGRDRTVNAFALPGGYLGINLGLLGVVSSRDELASVLGHELSHVTQRHISRLIAKDSAQTPWMIGAMILGALAASKNPDAGNALLVGGQALAAQSQLNFSRDMEREADRVGFGVMTQAGFEAQGFVTMFDKLQQAARLNDSGGYAYLRSHPLTTERIADMQSRLPLGAPHPVARAPLMHHAMMATRAKVLSNPGVDALRVWQTQADDASLGNAPAAQQAGILYGAALAALQLRDVALARHNLARLQTLAATDAKSAEPLRWLDAEINLAARDLTPAQRFDLATRLGLTAAPTPPLASLRRPQLMLQTQLALQLNQPALLNAQTQTLQTWLTVQPQDALTWQALARLYAAQNQTLRALRADAEAQAARLDYTGALDRLRAAQDMMRASEVGGSVADHIDASIIDTRQRQIEALVKQQVLSP
>NZ_CP019240.1|WP_075585386.1|3723831_3724170_-|phage-holin-family-protein
MKLILKWLLSAVALLAVAYIYPGVVVGSFGSALLAALVIGLFNMVLRPLLVLLTLPVTVITLGLFLFVINALMFWAASGVLSGFYVQGFGAALLGSLIYSGLGLVIDTALKD
>NZ_CP019240.1|WP_075585387.1|3724179_3724899_-|YjbE-family-putative-metal-transport-protein
MELFTSQWWSALLVIVVINLVLAGDNAIVIALAARNMPSHLKTRTIVWGTVGAIAVRLAMALGVVWLLEIPGLMLMGGVGLVWVAYQLLADDATEASGDPVAHTFRGAMNTIIVANALMGMGNVLGIAGAAHGSLSLLIIGLLLSVPIVVFGSALVLKLVKRFPLVLQIGGAVLALTAAKMIVSDPLLKGIFGAFHGDVTSEPLQAVARWVVHFVVIGGVLIAGWWKKSGAQASHQLGG
>NZ_CP019240.1|WP_075585583.1|3725053_3725800_-|3-oxoacyl-ACP-reductase-FabG
MTARLTNKVSIITGAAQGIGLATALKFAQEGATVIVCDVKQESVDEAVAQCRAAGATAEGFVMDVTDRAVVDDVVAKVKEKFGRIDVLVNNAGITMDSSLKKMTIDQFDKVIDVNLRGVFHCTQAVADGMVAQGSGVILNASSIVGLYGNFGQTNYAATKFGVIGFTKTWAREMGPKGVRINAVAPGFISTPMVAAMPEKVLADLSAKVHMRRLGKPEEIANIYAFLASDEASYINGECIEVSGGISL
>NZ_CP019240.1|WP_075585585.1|3725954_3726740_-|exodeoxyribonuclease-III
MFKLTSLNLNGIRSATSKGLQAWLGQIEPDCICVQEIKAQTPDLADRFEHLAGLRGYFHLADKKGYSGVGVYSRLEPSDVVAGFDSAEFDAEGRYLELRFDTPAVKRSIISCYFPSGSSGEERQLAKYRFLDLMYPHLQQLKSQREFIVCSDVNIAHQAIDLKNWRSNQKNSGFLPEERAWMTKLLGDGGMVDVYRQLHPNTTDEAYTWWSNRGQAYAKNVGWRLDYHLATPAWAAKAQSVAIYKGEKFSDHAPVSVEYAL
>NZ_CP019240.1|WP_075585584.1|3726768_3727461_+|orotate-phosphoribosyltransferase
MTTRQDPAQDNLAQDFVQFAVAGGVLRFGEFKTKAGRLSPYFFNAGLFDDGAKLGELAQFYAQRLLASGIEFDMIFGPAYKGIPLGAVLAVALARSGKNVPFAYNRKEAKDHGEGGTLVGAPLQGRVLIVDDVMSAGTAVRESIALIQRAGATAHAVVIALDRQEMATENGQDVNHSAVQYVQQQLGLQVCAIAKLNDLLQYLQHHSVPGLADAHERVAAYRTRYGVDAA
>NZ_CP019240.1|WP_075585388.1|3727502_3728186_+|DUF4124-domain-containing-protein
MTAAVLSLGLLMPPAHRSAQAQAQAQLPTPEIYTCTDARGRRLTSDRPIPECRDREQKILNPSGTVKTHVGPTLTSMERRDIEAKAKAEQAQQAILEEEKRRDRALLMRYPAPAVHQQERSAALSHVSRVKQTALTQVTDLLTQKTKLLAELDFYEKDPSKAPRKLKRQIDEVNQTLAAQGRFMADKDAEATRVNARFDAEQARLEPLWRMALPAAASSAAAPAKPN
>NZ_CP019240.1|WP_075585389.1|3728211_3729717_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNTTTDKQPAASTSLLVRGYEVVIGFETHAQLSTQSKIFSRAPTAFGAEPNTQACAVDLALPGTLPVMNKGAVERAIELGLALGSHIAPRSIFARKNYFYPDLPKGYQISQFEIPVVQGGSVEFYLETGKGAEAVLEKKSVRLVRAHLEEDAGKSLHEDFIGQTGIDLNRAGTPLLEIVTEPDMRSTAEAVAYAKELHKIVTWIGICDGNMQEGSFRCDANVSVRKPGAALGTRREIKNLNSFKFMQQAIDFEIRWQIEEIEDGRTIQQATVLFNPDTGETRAMRSKEDAADYRYFPDPDLPPLMIASEWVERVRAGMTELPRVMAARFCADYGLSDYDATTLTQSREVASYFEATVKACGQPKLVGNWIMGEVSRRLNASEADISACPVSAVQLGELVTRIQDGTISNNAAKQVMDALWADPQAQVDAIIEAKGLKQMNDTGALEKIVDAVLAANPKNVAEFRAGNAKALNALVGQIMKGSQGKANPQQVNDLLKQKLAG

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Crispr_ID: NZ_CP019240_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019240_7

3771336-3771445

Orphan

Consensus_repeat	Method
AGAGTCGGTAGCCGTCTGTTCGTCATCGCACGAAGTGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019240_7

>merge|NZ_CP019240|7|3771336-3771445|CRISPRCasFinder
AGAGTCGGTAGCCGTCTGTTCGTCATCGCACGAAGTGCCTAGGCGTCAATGCGCGCATTGTTGGCTTCGCAGAGTCGGTAGCCGTCTGTTCGTCATCGCACGAAGTGCCT

>NZ_CP019240|7|7|3771336-3771445|CRISPRCasFinder
AGAGTCGGTAGCCGTCTGTTCGTCATCGCACGAAGTGCCT	AGGCGTCAATGCGCGCATTGTTGGCTTCGC
AGAGTCGGTAGCCGTCTGTTCGTCATCGCACGAAGTGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019240.1\|WP_083633777.1\|3768050_3768470_+\|DUF2177-family-protein	unknown	unknown	gnl\|CDD\|378319
NZ_CP019240.1\|WP_075585420.1\|3768535_3769984_-\|CHASE3-domain-containing-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP019240.1\|WP_075585425.1\|3774663_3774960_+\|type-II-toxin-antitoxin-system-MqsR-family-toxin	unknown	unknown	gnl\|CDD\|240607
NZ_CP019240.1\|WP_075585418.1\|3766206_3766560_-\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|368352
NZ_CP019240.1\|WP_075585419.1\|3767532_3768054_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|379804
NZ_CP019240.1\|WP_139313290.1\|3764638_3764881_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223701
NZ_CP019240.1\|WP_075585426.1\|3774962_3775364_+\|type-II-toxin-antitoxin-system-MqsA-family-antitoxin	unknown	unknown	gnl\|CDD\|292359
NZ_CP019240.1\|WP_075585429.1\|3778327_3782578_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|350769
NZ_CP019240.1\|WP_075585421.1\|3770851_3771226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_139313291.1\|3772161_3772596_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_156876289.1\|3776321_3777008_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585414.1\|3764099_3764618_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|183405
NZ_CP019240.1\|WP_139313293.1\|3784525_3785758_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585417.1\|3765337_3766153_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585423.1\|3772961_3773255_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585430.1\|3782564_3784529_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379033
NZ_CP019240.1\|WP_083639682.1\|3762129_3764103_+\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_CP019240.1\|WP_075585424.1\|3773712_3774270_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019240.1\|WP_075585422.1\|3771731_3772094_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|226950
NZ_CP019240.1\|WP_075585588.1\|3766832_3767111_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019240.1\|WP_083633777.1\|3768050_3768470_+\|DUF2177-family-protein	gnl\|CDD\|378319	pfam09945, DUF2177, Predicted membrane protein (DUF2177). This domain, found in various hypothetical bacterial proteins, has no known function.	3.74264e-35
NZ_CP019240.1\|WP_075585420.1\|3768535_3769984_-\|CHASE3-domain-containing-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.96688e-48
NZ_CP019240.1\|WP_075585425.1\|3774663_3774960_+\|type-II-toxin-antitoxin-system-MqsR-family-toxin	gnl\|CDD\|240607	cd12869, MqsR, Motility quorum-sensing regulator (MqsR). This family includes domains similar to the motility quorum-sensing regulator MqsR, a toxin that is highly upregulated in persisters (dormant cells found in biofilms that are a source of antibiotic resistance). MqsR pairs with its antitoxin MqsA, forming a unique family of toxin:antitoxin (TA) systems. MqsR has been found to be structurally homologous to the bacterial ribonuclease (RelE) toxins; however, its sequence is not similar to any other known toxins and therefore its molecular function is as yet unknown.	4.68335e-39
NZ_CP019240.1\|WP_075585418.1\|3766206_3766560_-\|PRC-barrel-domain-containing-protein	gnl\|CDD\|368352	pfam05239, PRC, PRC-barrel domain. The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain.	1.01551e-09
NZ_CP019240.1\|WP_075585419.1\|3767532_3768054_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|379804	pfam16242, Pyrid_ox_like, Pyridoxamine 5'-phosphate oxidase like. This domain, approximately 140 residues in length, is mainly found in general stress proteins in various Xanthomonas species. It is composed of a six-stranded antiparallel beta-barrel flanked by five alpha-helices and can bind to FMN and FAD, suggesting that it may help the bacteria to react against the oxidative stress induced by the defense mechanisms of the plant.	1.24776e-32
NZ_CP019240.1\|WP_139313290.1\|3764638_3764881_+\|hypothetical-protein	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	8.9721e-05
NZ_CP019240.1\|WP_075585430.1\|3782564_3784529_-\|hypothetical-protein	gnl\|CDD\|379033	pfam13091, PLDc_2, PLD-like domain.	2.56234e-05
NZ_CP019240.1\|WP_075585429.1\|3778327_3782578_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	8.35226e-06
NZ_CP019240.1\|WP_075585426.1\|3774962_3775364_+\|type-II-toxin-antitoxin-system-MqsA-family-antitoxin	gnl\|CDD\|292359	pfam15731, MqsA_antitoxin, Antitoxin component of bacterial toxin-antitoxin system, MqsA. MqsA_antitoxin is a family of prokaryotic proteins that act as antidotes to the mRNA interferase MqsR. It has a zinc-binding at the very N-terminus indicating its DNA-binding capacity. MqsR is the gene most highly upregulated in E. Colo MqsR_toxin is a family of bacterial toxins that act as an mRNA interferase. MqsR is the gene most highly upregulated in E. coli persister cells and it plays an essential role in biofilm regulation and cell signalling. It forms part of a bacterial toxin-antitoxin TA system, and as expected for a TA system, the expression of the MqsR toxin leads to growth arrest, while co-expression with its antitoxin, MqsA, rescues the growth arrest phenotype. In addition, MqsR associates with MqsA to form a tight, non-toxic complex and both MqsA alone and the MqsR:MqsA2:MqsR complex bind and regulate the mqsR promoter. The structure of MqsR shows that is is a member of the RelE/YoeB family of bacterial RNases that are structurally and functionally characterized bacterial toxins.	3.28052e-84
NZ_CP019240.1\|WP_075585422.1\|3771731_3772094_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.66016e-11
NZ_CP019240.1\|WP_083639682.1\|3762129_3764103_+\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	7.49989e-40
NZ_CP019240.1\|WP_075585414.1\|3764099_3764618_+\|AI-2E-family-transporter	gnl\|CDD\|183405	PRK12287, tqsA, pheromone autoinducer 2 transporter; Reviewed.	0.000208933

>NZ_CP019240.1|WP_075585421.1|3770851_3771226_-|hypothetical-protein
MTNSSFLGGKRAATSPLGNDVDALGPSDSSDSGSDVQGERNLQGEGEHADQLGSLIVDTSSDSDASGTGERASATGRDGPDGADIAPDKVIGPDGEIEVNSDDLLSAVNLLAQDEGLEPEPPAL
>NZ_CP019240.1|WP_075585420.1|3768535_3769984_-|CHASE3-domain-containing-protein
MASRRLEKLASRLSGPFAIVLALLVLVVSETGHRELKSLSQERDASVEAQLTVGRLRRSLLFMESATRGYLLTGRANYLEPYFQQAPILEATLKTAQALSLQELQSKPVLAQLVDMSRRKQSDMQEMIRLFQSGDRLGALMLLETDAPQDAMLGISDLIDQVIRQEGAKFSVAGEVRESSASVSRRLIWVLVAASLVGAMLLMRLGKARERDRLVHMSQMHAERDLLDEEVTRRTAETVALALHMERVREDERGHLARELHDELGGLLSAAKMDVARIRKRMPETASGNDLLLHLNQSLNAGIALKRRIIEDLRPSSLANLGLQATLMIYCREFAQRAEIKVSTDIADVSLPEDHALAVYRIVQEALTNVAKYAAATEVRVSMVPTDDHLEIRVVDDGRGFAPQSGASIGGHGLQGMRFRVKACGGDLDIQSSPGNGTSVTATLPLPLHPQDCVESPTSQQTPARRRSDDVATLAQAAVVRG
>NZ_CP019240.1|WP_083633777.1|3768050_3768470_+|DUF2177-family-protein
MSIATYAWGYGGALITVGLLDGLWLGVIAREFYRSQMVAVAAENFNMVPALLFYFLYPLGVLFVALTPPAQGWAQALGRSALLGLVAYGVYDLTNMATLKAWPAKLALVDASWGTFITAMAGLAAYGAMTWAAAPPASR
>NZ_CP019240.1|WP_075585419.1|3767532_3768054_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MKVEEQNSPELRSLAERIEGSRTAMMTVCDAHGQLSSQPMTVIEMDGKGCLWMLISKSGHTARMAPEGKAMDTVNLAFSDDSRSTFTSVTARATLSDDRQRKEDLWSIMARPWFSQGVEDPDLAVLRLEPVKAEIWDGPDSSVLRMIAAAASVVARMPLGLGEHGTHALEPKL
>NZ_CP019240.1|WP_075585588.1|3766832_3767111_-|hypothetical-protein
MIATSTVVMFGLMYLNTYAMGHIYFSETRAYMALYMGAAMAVVMLVFMWSMYPEQAANLTDLRVSALAKGIIKAQREEIDEMKALVEELERK
>NZ_CP019240.1|WP_075585418.1|3766206_3766560_-|PRC-barrel-domain-containing-protein
MDTTTTSSDTICSDKVEGTAVYNDTGNKLGTIDSLMIDKRSGQVRHAVLEFGGFLGLGTDRYPLPWSMLKYDTDRDGYVVPLDKSRLNDAPRYPLTDRSPFTTDAGYGERVNNFYGY
>NZ_CP019240.1|WP_075585417.1|3765337_3766153_-|hypothetical-protein
MKLKHTLIAIASSTLLVTGVAHAADTTAAMSASAKASAAVANAKAAADATAARMTDRQMARSGNMKDDREQLQQKLRAGKNRADYAKILKDNGYRISAINEDKKDYLEYEVVKGGGSYEVQIDFENGATQASKVEVENNMWRADATERMMKDDKYQHANALVVDPKGRYSDRRYMKSWTDEKDRLEKALPMNLKATDYRSKLEGLGYKVTAVNDRETDYVEYEIAKGENSYEVQIDLNSGTGKAKKIDVTSNLWEADPTDRATDRAKETKK
>NZ_CP019240.1|WP_139313290.1|3764638_3764881_+|hypothetical-protein
MLQPWRELRDRLLRLMGGDPTKLVSNNVVEPMLYGDRTGVSSLAVLLSAVFWAALWGWHSRCSAFTSAPEVPRHRLRRAS
>NZ_CP019240.1|WP_075585414.1|3764099_3764618_+|AI-2E-family-transporter
MTPGRLAPGQRETHAVDAPPARGTVFQVMPGVQRFVLGPLVTWLRRWSVPCALAMTVVMVAVMVVALSLLLGAGMLMAQQVIALAKELPTHRHNIRQKLRDLRPALVPSGTTLELARVFGMVEGEIAAAQKQLRLDTQSEPELTRVAVDTDAVSSLPLQVLNTVAYRWPAPA
>NZ_CP019240.1|WP_083639682.1|3762129_3764103_+|AsmA-family-protein
MTFISRSLPRSKPLRIFSITAAVLLGLVALGELAGWPFLRAPLAQQLSKLTDSSVSLQGDFRAQLLIQPGIAVDSVTMGSASAVKVPHLLQAEGFVVRWRWSDLWRSRQGAPVRLKRVEADQIDAHLVRLANGNASWARARSESDVEDSATVLPQIETLVLNAGTIVYRDEPLNIDLQVRITQSSEPDTPLPWRATASGRYQGAAVKLEAQAGPNLPLLMQTEDNSALTPLRLSGGVGSTQLDFDGATGALWAGQVMRGTLTLRGASLGTSGKPLGLALPDTPAYRMRGRIAREGKVWSLVTDDATVGSSSLTAAMQYNTATIPPTLAGRVGGRRLAIADLAPAIGADQPPRDASRVLPDKTFDLPSLAQMNANVRVDLAQLDFGTPSIAPMTDLKVHLTLVNSRLDLSGLSARVAGGLLTGSTRLQANQRPPQWEAALRLAEVDLQRWIRALNKGAASLPDDSPAYLSGTLNAKLSLTGQGNSVADILGSGNGRLTLDLVNGEISQLVTEAIGLDAAQALGMLIAGDAPLRLNCARAEAVIQDGVVKTRHAVLDNKDSTLYIQGGASLKTETLQLRVVADPKDFSPFSLRTPLNVTGTLKQLQVRPEASGLLARAAGALVLGALAPPAALLAFIDTGAKPNSEPCAPVKAQKAKTP
>NZ_CP019240.1|WP_075585422.1|3771731_3772094_-|DDE-type-integrase/transposase/recombinase
MRQIHKAGEKLFVDFAGPTIGLTDGSRAHIFVSSMGASGYTFALACDAEKTADWIEGMTGALHHMGCVCALIVPDNPRAVIAVPDRYEPRVNDSVLDFARHYGLSVLPARPICPQDKAKA
>NZ_CP019240.1|WP_139313291.1|3772161_3772596_-|hypothetical-protein
MPTQPMKMRMIKEALRYNLELGHSLERCARALNISKGVVAKYVALAKAAALDWAQIAAMTEVDLQARLQQVKPKARQSAVQLATAQVCNGSNGSNARDAARCEGPIPTSGPFVQPDYAQMHRELSRKGMTLMLAMAIAPGQSPA
>NZ_CP019240.1|WP_075585423.1|3772961_3773255_-|hypothetical-protein
MYSHAQNVSPFCFVSLQRDWAFEDKGARSADTAERLRQWLNPMNAIALHAAHRSIQATGKDIALARKSISIELDVEFRRLHNELCTSLVLWLCPLVT
>NZ_CP019240.1|WP_075585424.1|3773712_3774270_-|hypothetical-protein
MMMLITPEDFAKLSLTCRQELLEFFTSYEALSPYDDMSLTEEVGYFDGAHDECADGLLESRGAIQGAPRADGSRKTARKSEKKIVTIDLDQAFQLIKNISPRSKRVLGRFVSGKWVSISDLVGPDLEYRDLVELKRSLVGGVNRRLRTVIQDRAAVLFLANQDKSQIRISPPSAESLRQVLLGPE
>NZ_CP019240.1|WP_075585425.1|3774663_3774960_+|type-II-toxin-antitoxin-system-MqsR-family-toxin
MEKGTPHCKLTTVKALVDAGQVRTTHAARVGANEMGLDFISMLGVVTALMPADFYKSMTTHVDHTVWQDVYRPSTQMGDVYLKLTVINDLLIVSFKEL
>NZ_CP019240.1|WP_075585426.1|3774962_3775364_+|type-II-toxin-antitoxin-system-MqsA-family-antitoxin
MKCPVCGAAELIHDTRDLPYTYKGETILIAAVTGDFCPACAESILDAAQSDRVMREMRDFSKQVNAAIVDPGFITSVRKKLSLDQREAAEIFGGGVNAFSRYENGKTKPPLALVKLLKVLERHPDLLDEVRAA
>NZ_CP019240.1|WP_156876289.1|3776321_3777008_+|hypothetical-protein
MAEQAIDQAFATNHTQVMFYLPVTPEWIDQLILSLTLICRSSCRGVKELMQVMLGVSVSEGTVHNRLQCAAAQASAINRAQDLSAIGVGLHDEIFQRSVAVLAGVDAASTYCYLLAAAEQRDSDTWAIHLLDACKQGFNPDHTIADAGQGLRAGQKVALPGTPCHGDVFHIQQQCESLANVLARRAKGAVSRCRALEAQMLQAKEVGCGNTLSRELTLARQAHKKQNF
>NZ_CP019240.1|WP_075585429.1|3778327_3782578_-|DEAD/DEAH-box-helicase-family-protein
MNKLDLATADALIDFSGKGAVSNDLSQLQLEGAVALHNILSDKGLAYLADEVGMGKTYVALGVVALMRRFKPDLRVLYLLPKNNVRDKWLKDYRSFIDKNYRSQDGIVKGFGNAPAAPNRLCSSLSDLVQAVATESARDYFICTSAFSLPMGGTSAELRVTLDRFRTALPQNAARVDTLIEALRNVNSTDVDMAAFKLRVKQSWAAALNGILPQFDLVVVDEAHNYRRGLQSADRNQLLATVLGTDKGSSSTSIKRVNRVLLLSATPFDREIGQLKRQLELFAKGELLEVSPKASWDHIHTALKPFMVRRLNSILLGKKAHTRNMYRTEHRCGDRAEVKLGLEQQLFAALLQKKVSESLNENNSGKFELGMLASFESYLPSNKGKPVQFDGVDDQVNAVEGRERDAPDRTVVEYLVNDFQNRFRAFPPHPKMDEVARRAKVSAFDANKKQLIFVRRVGSVGELKAKIEDTYNRWISQYVASDPEITEWFGEYQKRIGERQLAQLDDELDEDKTNLSSFFAWFYRGNNELLSRASEQLQITPFNYRNLLGSASMMFATNWSTLPGMPRTDQLDFGSLTELPSLPSSPSRAQQFERAQYAYLRAVMNRPDSSCVRVARRIFSIAYFDVKTEHAVVDASGLVQALNQTTFWEAIQVQPDLEALGLKWTIETFDFLAGANETDAESSIRKILIHHRLAAAICRLDHPFIDLYALRGSRGKSEDGSADENLIRAFSTLLSAQSKYPDVFSSFTVLRDLFANLDLLLKQNFEDAADKAIAELTTYLTRQLQPLSPVLGATGLNSASRSAIARKFRMPGYPRVLVSTNVFQEGEDLHTFCDSVVHYGISASPISLEQKVGRVDRIASMSHRAMKSVTTGHEDHYIQVGFPHIRESLEFLQVRMAARNLNQFLLSMNKIGDTGPRPSTEVELSEQLLDSRPIEPPLMDELKSPFEILPPALDGCNRTTELKEAQSILNARTAHVQCTVENCLGMLTGAQVSLRPMGGRLQWEGVNGMLVTLKGAHGRDQLILSITAPFLGAFDESVAQAPGAAEYLSQLQENPLIRLQRISTSEDSLSRNVRRNAEIFAGTKGILSDGETMDLYHRVSGEVWHADSSESLPDSLPELVRSLCGQHGSYQVKQGGSGELIYIFDVEDRKQHVKWSGLGGYVVLTARVLNADQTAVLASHKELLVQHTLYRNAVFDMVDFHIDSDLALAVRAIHPLTHLDREELEFASSMVAVEADRLRQILFSVDEDDDAPGDEATVVSKTVNSLRVWAVDNDVMCIIREVLSKGPLTSDELIRQTAYGLGYQRAVLGISTALEGALLAAARRGVTMRNGNLVQLKAHSIADYEHEHLKNQFLAAISRQTSGFIEREEAVRAFARWMGFARTGPVIADVGASLIRKLIRAGRLQTSGSQIRRDRS
>NZ_CP019240.1|WP_075585430.1|3782564_3784529_-|hypothetical-protein
MKSLTISESFKEAIGARTVKSAFFSTYCFEPDFFELDVVPLLLGGPALSTDETIRYHQLQSLMSFGRGRFAVAYDVDVFNPTFAAKLEIDYLPVRVPAACQHAKIAVLEVLDEQDNVAIILAAGSFNLTKAGWWTNIEVGHWIELSKENAPLNVLIPLRAALDYFQTTQPVPAIEALQARLSEWKTGPRSEVCSFYFSGAGKVRNSFPDFLNAVDRGPVEIVSPFFAEEGDNTEMVKFLISFKKVSLFLPTDDTGAATMTHPVYQDLSKLVQWCDWNADLAQRFSLRKNEELERKLHAKIYSGKNWLFIGSVNLSYMAMYRNVEAGFLLTGRSELKLLTPLKEEAQKFSAKDPVEAAKHNSEVAMPPIQLTYDWLTHELEMLSPETGRLTLYDAQGQKIGQYPLTAQATSKFTVASLSAQLKHSALVAATWNSPDGASSDKRNLLVSQRQIYCRPNSLPELDVQDLLRIFQNMNSAVRMAMITSLVEKQARRSKEGLTSNEFLSPLPSTEDRSNFFSEFSEVNGAFWNLRKKLGQAQSAGRTNELAYYLDGQQPDSLRGLANSLGATDDGSQISLIVRYLTLLSMDEILTLYPPKSNNLKREVLELIGQTEQNEEFDALPNKFEFLAWIKDKFTMPVIQVATSPTQQVSSDEQA
>NZ_CP019240.1|WP_139313293.1|3784525_3785758_-|hypothetical-protein
MTLDVGTPMVTVFSSYDDRARPKGSRDPLGAEATWSYLGRRIVGNLTTVTANLDNFIVALLCCQFANQNQSEQELIQERYLRAEQVAAYLKLAAGAREPGFLGITRASKNFERDRIVLGTAAEAQLLASQAGYGLWGLYSSALEGAGLISGANRRLTKAGEVLVQEIVAEFELPNWNKFCNIASAVNLDKDATKNLASVFISVIGSSSLRQTVVEALIATQRDCELQSELFRLATSYLKKKSDWTISDFCNWILSHSEVTSELKTTMLRISSIDPLLNLADAVMSWLLGKNGEQMDAVAQTLKSHVQELQFGDDWQKELELPHRTFLKAFQAAASVGDATAMIRLLMVQNKTLMNARGGAAWIDWDGKNLAVRVKNDKPQDISKLSAQTSNWRYTYFIRAFLDIAQQGMA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019240_2	2.69\|377022\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	377022-377055	34	MF495477	Aeromonas salmonicida plasmid pS28-3, complete sequence	4393-4426	1	0.971
NZ_CP019240_2	2.69\|377022\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	377022-377055	34	AJ297913	Uncultured bacterium plasmid pIPO2T, complete sequence	4308-4341	1	0.971
NZ_CP019240_2	2.69\|377022\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	377022-377055	34	NC_010332	Collimonas fungivorans plasmid pTer331, complete sequence	4260-4293	1	0.971
NZ_CP019240_2	2.69\|377022\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	377022-377055	34	NZ_MN366357	Bacterium plasmid pALTS28, complete sequence	39440-39473	1	0.971
NZ_CP019240_2	2.69\|377022\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	377022-377055	34	NZ_CP020047	Thiomonas intermedia strain ATCC 15466 plasmid pXI1, complete sequence	36194-36227	1	0.971
NZ_CP019240_2	2.69\|377022\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	377022-377055	34	KJ850907	Uncultured bacterium plasmid pSFA231, complete sequence	38649-38682	1	0.971
NZ_CP019240_2	2.108\|377022\|35\|NZ_CP019240\|PILER-CR	377022-377056	35	MF495477	Aeromonas salmonicida plasmid pS28-3, complete sequence	4392-4426	2	0.943
NZ_CP019240_2	2.108\|377022\|35\|NZ_CP019240\|PILER-CR	377022-377056	35	AJ297913	Uncultured bacterium plasmid pIPO2T, complete sequence	4307-4341	2	0.943
NZ_CP019240_2	2.108\|377022\|35\|NZ_CP019240\|PILER-CR	377022-377056	35	NC_010332	Collimonas fungivorans plasmid pTer331, complete sequence	4259-4293	2	0.943
NZ_CP019240_2	2.108\|377022\|35\|NZ_CP019240\|PILER-CR	377022-377056	35	NZ_MN366357	Bacterium plasmid pALTS28, complete sequence	39440-39474	2	0.943
NZ_CP019240_2	2.108\|377022\|35\|NZ_CP019240\|PILER-CR	377022-377056	35	NZ_CP020047	Thiomonas intermedia strain ATCC 15466 plasmid pXI1, complete sequence	36194-36228	2	0.943
NZ_CP019240_2	2.108\|377022\|35\|NZ_CP019240\|PILER-CR	377022-377056	35	KJ850907	Uncultured bacterium plasmid pSFA231, complete sequence	38649-38683	2	0.943
NZ_CP019240_2	2.12\|372948\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	372948-372981	34	AY526908	Bordetella phage BMP-1, complete genome	2928-2961	6	0.824
NZ_CP019240_2	2.12\|372948\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	372948-372981	34	NC_005357	Bordetella phage BPP-1, complete genome	2928-2961	6	0.824
NZ_CP019240_2	2.12\|372948\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	372948-372981	34	AY526909	Bordetella phage BIP-1, complete genome	2928-2961	6	0.824
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP031947	Ruegeria sp. AD91A plasmid unnamed1, complete sequence	5324-5353	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	110905-110934	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	113904-113933	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013634	Rhizobium sp. N324 plasmid pRspN324d, complete sequence	120369-120398	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013525	Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence	106965-106994	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013554	Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence	104350-104379	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013588	Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence	103793-103822	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013560	Rhizobium phaseoli strain N841 plasmid pRphaN841c, complete sequence	104037-104066	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013577	Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence	108619-108648	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013549	Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence	108989-109018	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013529	Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence	101521-101550	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013534	Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence	108989-109018	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	332198-332227	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013539	Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence	107308-107337	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013545	Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence	108983-109012	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013565	Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence	104350-104379	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013503	Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence	110044-110073	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013582	Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence	101521-101550	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013509	Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence	110044-110073	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013520	Rhizobium sp. N113 plasmid pRspN113c, complete sequence	110044-110073	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013571	Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence	108619-108648	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013493	Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence	110044-110073	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP013516	Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence	110443-110472	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NC_010998	Rhizobium etli CIAT 652 plasmid pA, complete sequence	104026-104055	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	18026-18055	6	0.8
NZ_CP019240_7	7.1\|3771376\|30\|NZ_CP019240\|CRISPRCasFinder	3771376-3771405	30	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	503156-503185	6	0.8
NZ_CP019240_2	2.20\|373519\|33\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373519-373551	33	MN204504	Streptomyces phage Soshi, complete genome	20002-20034	7	0.788
NZ_CP019240_2	2.33\|374449\|33\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	374449-374481	33	NC_019522	Pectobacterium phage ZF40, complete genome	36051-36083	7	0.788
NZ_CP019240_2	2.58\|376236\|35\|NZ_CP019240\|CRISPRCasFinder,CRT	376236-376270	35	AP018705	Uncultured bacterium plasmid pSN0729-62 DNA, complete sequence	4391-4425	7	0.8
NZ_CP019240_2	2.58\|376236\|35\|NZ_CP019240\|CRISPRCasFinder,CRT	376236-376270	35	AP018706	Uncultured bacterium plasmid pSN0729-70 DNA, complete sequence	4295-4329	7	0.8
NZ_CP019240_4	4.5\|1623547\|33\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	1623547-1623579	33	NZ_CP038639	Cupriavidus oxalaticus strain X32 plasmid unnamed4, complete sequence	179710-179742	7	0.788
NZ_CP019240_2	2.42\|375094\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	375094-375127	34	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	499008-499041	8	0.765
NZ_CP019240_2	2.50\|375666\|33\|NZ_CP019240\|CRISPRCasFinder,CRT	375666-375698	33	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	729029-729061	8	0.758
NZ_CP019240_2	2.89\|375666\|34\|NZ_CP019240\|PILER-CR	375666-375699	34	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	729028-729061	8	0.765
NZ_CP019240_2	2.97\|376236\|36\|NZ_CP019240\|PILER-CR	376236-376271	36	AP018705	Uncultured bacterium plasmid pSN0729-62 DNA, complete sequence	4391-4426	8	0.778
NZ_CP019240_2	2.97\|376236\|36\|NZ_CP019240\|PILER-CR	376236-376271	36	AP018706	Uncultured bacterium plasmid pSN0729-70 DNA, complete sequence	4295-4330	8	0.778
NZ_CP019240_2	2.1\|372166\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	372166-372199	34	NZ_CP049142	Pseudomonas nitroreducens strain HBP1 plasmid pPniHBP1_1, complete sequence	178843-178876	9	0.735
NZ_CP019240_2	2.12\|372948\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	372948-372981	34	NZ_CP029333	Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence	67899-67932	9	0.735
NZ_CP019240_2	2.12\|372948\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	372948-372981	34	NC_022654	Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence	12356-12389	9	0.735
NZ_CP019240_2	2.42\|375094\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	375094-375127	34	CP031731	Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete sequence	55945-55978	9	0.735
NZ_CP019240_2	2.59\|376308\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	376308-376341	34	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	600985-601018	9	0.735
NZ_CP019240_2	2.62\|376522\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	376522-376555	34	NC_009339	Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence	224137-224170	9	0.735
NZ_CP019240_2	2.74\|377378\|35\|NZ_CP019240\|CRISPRCasFinder,CRT	377378-377412	35	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	825529-825563	9	0.743
NZ_CP019240_2	2.89\|375666\|34\|NZ_CP019240\|PILER-CR	375666-375699	34	NZ_CP042297	Escherichia coli strain RM9088 plasmid p2RM9088, complete sequence	37408-37441	9	0.735
NZ_CP019240_2	2.113\|377378\|36\|NZ_CP019240\|PILER-CR	377378-377413	36	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	825529-825564	9	0.75
NZ_CP019240_2	2.4\|372379\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	372379-372412	34	NZ_CP025992	Lactobacillus plantarum subsp. plantarum strain LB1-2 plasmid pLB1-2A, complete sequence	6715-6748	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	NZ_KX426230	Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.5, complete sequence	11890-11923	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	NZ_KX426228	Acinetobacter lwoffii strain ED23-35 plasmid pALWED1.3, complete sequence	2209-2242	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	CP033547	Acinetobacter nosocomialis strain 2014N23-120 plasmid p2014N23-120-2, complete sequence	16151-16184	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	NZ_CP027249	Acinetobacter pittii strain WCHAP100004 plasmid pOXA58_100004, complete sequence	6003-6036	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	NZ_CP015620	Acinetobacter schindleri strain ACE plasmid p5AsACE, complete sequence	3032-3065	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	NZ_CP025619	Acinetobacter schindleri strain SGAir0122 plasmid pSGAir0122, complete sequence	40697-40730	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	NZ_KX426231	Acinetobacter lwoffii strain EK30A plasmid pALWEK1.5, complete sequence	6590-6623	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	CP033558	Acinetobacter nosocomialis strain 2012C01-137 plasmid p2012C01-137-1, complete sequence	72354-72387	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	NZ_CP026086	Acinetobacter pittii strain WCHAP005069 plasmid pOXA58_005069, complete sequence	96485-96518	10	0.706
NZ_CP019240_2	2.17\|373304\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373304-373337	34	NC_025120	Acinetobacter sp. M131 plasmid pM131-6, complete sequence	4687-4720	10	0.706
NZ_CP019240_2	2.36\|374662\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	374662-374695	34	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	730650-730683	10	0.706
NZ_CP019240_2	2.36\|374662\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	374662-374695	34	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	343489-343522	10	0.706
NZ_CP019240_2	2.36\|374662\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	374662-374695	34	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	523082-523115	10	0.706
NZ_CP019240_2	2.50\|375666\|33\|NZ_CP019240\|CRISPRCasFinder,CRT	375666-375698	33	NZ_CP042297	Escherichia coli strain RM9088 plasmid p2RM9088, complete sequence	37408-37440	10	0.697
NZ_CP019240_2	2.54\|375949\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	375949-375982	34	NZ_CP020899	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence	341574-341607	10	0.706
NZ_CP019240_2	2.62\|376522\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	376522-376555	34	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	22279-22312	10	0.706
NZ_CP019240_2	2.72\|377236\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	377236-377269	34	NC_048144	Microbacterium phage Schubert, complete genome	38373-38406	10	0.706
NZ_CP019240_2	2.4\|372379\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	372379-372412	34	NZ_CP053901	Proteus mirabilis strain YPM35 plasmid pJPM35-3, complete sequence	15703-15736	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	323100-323133	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	343593-343626	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	326344-326377	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	387862-387895	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	479746-479779	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	2054088-2054121	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	328432-328465	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	938404-938437	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1317531-1317564	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	327603-327636	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	336718-336751	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	324372-324405	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	217276-217309	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	323459-323492	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	320636-320669	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	324607-324640	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	327621-327654	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	342060-342093	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	326395-326428	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	340319-340352	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	319257-319290	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	342060-342093	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	326395-326428	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	342060-342093	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	319260-319293	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	342064-342097	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	326395-326428	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	326395-326428	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	326395-326428	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	319260-319293	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	336701-336734	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	336666-336699	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	331222-331255	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	329351-329384	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	324906-324939	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	319260-319293	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	342060-342093	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	340314-340347	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	319260-319293	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	319260-319293	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	326398-326431	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	340320-340353	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	301594-301627	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1746763-1746796	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	308053-308086	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1614314-1614347	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	574307-574340	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	89529-89562	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	2198157-2198190	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	64104-64137	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	755332-755365	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1770258-1770291	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	436582-436615	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1752304-1752337	11	0.676
NZ_CP019240_2	2.15\|373162\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	373162-373195	34	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1752304-1752337	11	0.676
NZ_CP019240_2	2.36\|374662\|34\|NZ_CP019240\|PILER-CR,CRISPRCasFinder,CRT	374662-374695	34	NC_009929	Acaryochloris marina MBIC11017 plasmid pREB4, complete sequence	30966-30999	11	0.676
NZ_CP019240_2	2.62\|376522\|34\|NZ_CP019240\|CRISPRCasFinder,CRT	376522-376555	34	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	617217-617250	11	0.676
NZ_CP019240_2	2.111\|377236\|35\|NZ_CP019240\|PILER-CR	377236-377270	35	NC_048144	Microbacterium phage Schubert, complete genome	38372-38406	11	0.686

1. spacer 2.69|377022|34|NZ_CP019240|CRISPRCasFinder,CRT matches to MF495477 (Aeromonas salmonicida plasmid pS28-3, complete sequence) position: , mismatch: 1, identity: 0.971

ttcgttgccattccttaacctccaagtaaggcgc	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgc	Protospacer
*************.********************

2. spacer 2.69|377022|34|NZ_CP019240|CRISPRCasFinder,CRT matches to AJ297913 (Uncultured bacterium plasmid pIPO2T, complete sequence) position: , mismatch: 1, identity: 0.971

ttcgttgccattccttaacctccaagtaaggcgc	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgc	Protospacer
*************.********************

3. spacer 2.69|377022|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NC_010332 (Collimonas fungivorans plasmid pTer331, complete sequence) position: , mismatch: 1, identity: 0.971

ttcgttgccattccttaacctccaagtaaggcgc	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgc	Protospacer
*************.********************

4. spacer 2.69|377022|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_MN366357 (Bacterium plasmid pALTS28, complete sequence) position: , mismatch: 1, identity: 0.971

ttcgttgccattccttaacctccaagtaaggcgc	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgc	Protospacer
*************.********************

5. spacer 2.69|377022|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP020047 (Thiomonas intermedia strain ATCC 15466 plasmid pXI1, complete sequence) position: , mismatch: 1, identity: 0.971

ttcgttgccattccttaacctccaagtaaggcgc	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgc	Protospacer
*************.********************

6. spacer 2.69|377022|34|NZ_CP019240|CRISPRCasFinder,CRT matches to KJ850907 (Uncultured bacterium plasmid pSFA231, complete sequence) position: , mismatch: 1, identity: 0.971

ttcgttgccattccttaacctccaagtaaggcgc	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgc	Protospacer
*************.********************

7. spacer 2.108|377022|35|NZ_CP019240|PILER-CR matches to MF495477 (Aeromonas salmonicida plasmid pS28-3, complete sequence) position: , mismatch: 2, identity: 0.943

ttcgttgccattccttaacctccaagtaaggcgca	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgct	Protospacer
*************.********************

8. spacer 2.108|377022|35|NZ_CP019240|PILER-CR matches to AJ297913 (Uncultured bacterium plasmid pIPO2T, complete sequence) position: , mismatch: 2, identity: 0.943

ttcgttgccattccttaacctccaagtaaggcgca	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgct	Protospacer
*************.********************

9. spacer 2.108|377022|35|NZ_CP019240|PILER-CR matches to NC_010332 (Collimonas fungivorans plasmid pTer331, complete sequence) position: , mismatch: 2, identity: 0.943

ttcgttgccattccttaacctccaagtaaggcgca	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgct	Protospacer
*************.********************

10. spacer 2.108|377022|35|NZ_CP019240|PILER-CR matches to NZ_MN366357 (Bacterium plasmid pALTS28, complete sequence) position: , mismatch: 2, identity: 0.943

ttcgttgccattccttaacctccaagtaaggcgca	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgct	Protospacer
*************.********************

11. spacer 2.108|377022|35|NZ_CP019240|PILER-CR matches to NZ_CP020047 (Thiomonas intermedia strain ATCC 15466 plasmid pXI1, complete sequence) position: , mismatch: 2, identity: 0.943

ttcgttgccattccttaacctccaagtaaggcgca	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgct	Protospacer
*************.********************

12. spacer 2.108|377022|35|NZ_CP019240|PILER-CR matches to KJ850907 (Uncultured bacterium plasmid pSFA231, complete sequence) position: , mismatch: 2, identity: 0.943

ttcgttgccattccttaacctccaagtaaggcgca	CRISPR spacer
ttcgttgccattctttaacctccaagtaaggcgct	Protospacer
*************.********************

13. spacer 2.12|372948|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to AY526908 (Bordetella phage BMP-1, complete genome) position: , mismatch: 6, identity: 0.824

caattcgagttcgtcggcccgttgttccaattgg	CRISPR spacer
gcgttcgagttcgacggcccgttgttccagttcg	Protospacer
  .********** ***************.** *

14. spacer 2.12|372948|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NC_005357 (Bordetella phage BPP-1, complete genome) position: , mismatch: 6, identity: 0.824

caattcgagttcgtcggcccgttgttccaattgg	CRISPR spacer
gcgttcgagttcgacggcccgttgttccagttcg	Protospacer
  .********** ***************.** *

15. spacer 2.12|372948|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to AY526909 (Bordetella phage BIP-1, complete genome) position: , mismatch: 6, identity: 0.824

caattcgagttcgtcggcccgttgttccaattgg	CRISPR spacer
gcgttcgagttcgacggcccgttgttccagttcg	Protospacer
  .********** ***************.** *

16. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP031947 (Ruegeria sp. AD91A plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtcaatgcgcgcattgttggcttcgc	CRISPR spacer
acgactttatgcgcgcattgttggcttcga	Protospacer
* *  *. *********************

17. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

18. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

19. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013634 (Rhizobium sp. N324 plasmid pRspN324d, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

20. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013525 (Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

21. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013554 (Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

22. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013588 (Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

23. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013560 (Rhizobium phaseoli strain N841 plasmid pRphaN841c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

24. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

25. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

26. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013529 (Rhizobium phaseoli strain R723 plasmid pRphaR723b, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

27. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

28. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

29. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013539 (Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

30. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

31. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013565 (Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

32. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013503 (Rhizobium esperanzae strain N561 plasmid pRspN561c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

33. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013582 (Rhizobium phaseoli strain N261 plasmid pRphaN261b, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

34. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013509 (Rhizobium sp. N1341 plasmid pRspN1341d, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

35. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013520 (Rhizobium sp. N113 plasmid pRspN113c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

36. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

37. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013493 (Rhizobium sp. N6212 plasmid pRspN6212c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

38. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP013516 (Rhizobium sp. N1314 plasmid pRspN1314e, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

39. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

40. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtcaatgcgcgcattgttggcttcgc	CRISPR spacer
aggcgtcaatgcgcacattattgccaacgt	Protospacer
**************.****.*** *  **.

41. spacer 7.1|3771376|30|NZ_CP019240|CRISPRCasFinder matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 6, identity: 0.8

aggcgtca-atgcgcgcattgttggcttcgc	CRISPR spacer
-gatggcacatgcgcggattgttggcttcgt	Protospacer
 *..* ** ******* *************.

42. spacer 2.20|373519|33|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to MN204504 (Streptomyces phage Soshi, complete genome) position: , mismatch: 7, identity: 0.788

ggcaatgccgctgccccaggtggtgacgttggc	CRISPR spacer
agcaatgccgctgccccaggaagtgccccgggc	Protospacer
.******************* .*** * . ***

43. spacer 2.33|374449|33|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NC_019522 (Pectobacterium phage ZF40, complete genome) position: , mismatch: 7, identity: 0.788

accatcaaccggcgtttgagtcggtttttttac	CRISPR spacer
aatataccccggcctttgagtcgggttttttac	Protospacer
* .**   ***** ********** ********

44. spacer 2.58|376236|35|NZ_CP019240|CRISPRCasFinder,CRT matches to AP018705 (Uncultured bacterium plasmid pSN0729-62 DNA, complete sequence) position: , mismatch: 7, identity: 0.8

ccgtcctacgccttgaccaataacaacgccaatat	CRISPR spacer
cccagctacgcattgaccaataacaacgcgaatgc	Protospacer
**   ****** ***************** ***..

45. spacer 2.58|376236|35|NZ_CP019240|CRISPRCasFinder,CRT matches to AP018706 (Uncultured bacterium plasmid pSN0729-70 DNA, complete sequence) position: , mismatch: 7, identity: 0.8

ccgtcctacgccttgaccaataacaacgccaatat	CRISPR spacer
cccagctacgcattgaccaataacaacgcgaatgc	Protospacer
**   ****** ***************** ***..

46. spacer 4.5|1623547|33|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038639 (Cupriavidus oxalaticus strain X32 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788

tttttgccctcataggtttcgatgtg--aatctcg	CRISPR spacer
tttttgccttcatcggtttcgatgcggtaacgt--	Protospacer
********.**** **********.*  **. *

47. spacer 2.42|375094|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.765

ggcactacatcgatgcgctgctgaatgcactgat--	CRISPR spacer
gcgccttcatcgacgcgctgctgaatg--ccgataa	Protospacer
*   ** ******.*************  *.***

48. spacer 2.50|375666|33|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 8, identity: 0.758

cctgtgctgaccagtgcggtggtggcgactact	CRISPR spacer
ccgctgctcaccggtgcggtggtggcgagctcc	Protospacer
**  **** ***.*************** . *.

49. spacer 2.89|375666|34|NZ_CP019240|PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 8, identity: 0.765

cctgtgctgaccagtgcggtggtggcgactacta	CRISPR spacer
ccgctgctcaccggtgcggtggtggcgagctcca	Protospacer
**  **** ***.*************** . *.*

50. spacer 2.97|376236|36|NZ_CP019240|PILER-CR matches to AP018705 (Uncultured bacterium plasmid pSN0729-62 DNA, complete sequence) position: , mismatch: 8, identity: 0.778

ccgtcctacgccttgaccaataacaacgccaatata	CRISPR spacer
cccagctacgcattgaccaataacaacgcgaatgcc	Protospacer
**   ****** ***************** ***..

51. spacer 2.97|376236|36|NZ_CP019240|PILER-CR matches to AP018706 (Uncultured bacterium plasmid pSN0729-70 DNA, complete sequence) position: , mismatch: 8, identity: 0.778

ccgtcctacgccttgaccaataacaacgccaatata	CRISPR spacer
cccagctacgcattgaccaataacaacgcgaatgcc	Protospacer
**   ****** ***************** ***..

52. spacer 2.1|372166|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049142 (Pseudomonas nitroreducens strain HBP1 plasmid pPniHBP1_1, complete sequence) position: , mismatch: 9, identity: 0.735

aagccgaaagcgtttgcagccgcctcgacagcca	CRISPR spacer
tgcccgaaagcgtttgcagcagcctggatgacga	Protospacer
 . ***************** **** **...* *

53. spacer 2.12|372948|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029333 (Mycobacterium avium subsp. hominissuis strain MAC109 plasmid pMAC109a, complete sequence) position: , mismatch: 9, identity: 0.735

caattcgagttcgtcggcccgttgttccaattgg	CRISPR spacer
gacaccgagttcgtcggccagttcttccaggcgg	Protospacer
 *  .************** *** *****. .**

54. spacer 2.12|372948|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NC_022654 (Mycobacterium kansasii ATCC 12478 plasmid pMK12478, complete sequence) position: , mismatch: 9, identity: 0.735

caattcgagttcgtcggcccgttgttccaattgg	CRISPR spacer
gacaccgagttcgtcggccagttcttccaggcgg	Protospacer
 *  .************** *** *****. .**

55. spacer 2.42|375094|34|NZ_CP019240|CRISPRCasFinder,CRT matches to CP031731 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

ggcactacatcgatgcgctgctgaatgcactgat	CRISPR spacer
agtcatacatcgatgcgctgcagagtgcaggaat	Protospacer
.*.  **************** **.****  .**

56. spacer 2.59|376308|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.735

accacgtctgcccgcactgccacggcaaaatcac	CRISPR spacer
ggatcggtttcccgcacggccacggcaagatcac	Protospacer
.   ** .* ******* **********.*****

57. spacer 2.62|376522|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NC_009339 (Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence) position: , mismatch: 9, identity: 0.735

aggcagggccaactgcgcgccgtggcggccggtg	CRISPR spacer
ctgcaccatcaacggcgcgccgtggcggcccgtc	Protospacer
  ***  ..**** **************** **

58. spacer 2.74|377378|35|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

aggccaaa---caccagcgcatcgtcccagccgcgcat	CRISPR spacer
---tcggattcctccagcgcatcgtcccagacgcggat	Protospacer
   .*..*   * ***************** **** **

59. spacer 2.89|375666|34|NZ_CP019240|PILER-CR matches to NZ_CP042297 (Escherichia coli strain RM9088 plasmid p2RM9088, complete sequence) position: , mismatch: 9, identity: 0.735

cctgtgctgaccagtgcggtggtggcgactacta-	CRISPR spacer
atggtgctgtctagtgcggtggtggcg-cagccag	Protospacer
 . ****** *.*************** * .*.*

60. spacer 2.113|377378|36|NZ_CP019240|PILER-CR matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

aggccaaa---caccagcgcatcgtcccagccgcgcatg	CRISPR spacer
---tcggattcctccagcgcatcgtcccagacgcggatg	Protospacer
   .*..*   * ***************** **** ***

61. spacer 2.4|372379|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025992 (Lactobacillus plantarum subsp. plantarum strain LB1-2 plasmid pLB1-2A, complete sequence) position: , mismatch: 10, identity: 0.706

tctacaacaggtttatctacaacaggtttatcta	CRISPR spacer
aggtcaacaggtttatctacaaatggttagtcag	Protospacer
    ******************  **** .** .

62. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX426230 (Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.5, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

63. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX426228 (Acinetobacter lwoffii strain ED23-35 plasmid pALWED1.3, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

64. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to CP033547 (Acinetobacter nosocomialis strain 2014N23-120 plasmid p2014N23-120-2, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

65. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027249 (Acinetobacter pittii strain WCHAP100004 plasmid pOXA58_100004, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

66. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015620 (Acinetobacter schindleri strain ACE plasmid p5AsACE, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

67. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025619 (Acinetobacter schindleri strain SGAir0122 plasmid pSGAir0122, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

68. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX426231 (Acinetobacter lwoffii strain EK30A plasmid pALWEK1.5, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

69. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to CP033558 (Acinetobacter nosocomialis strain 2012C01-137 plasmid p2012C01-137-1, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

70. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026086 (Acinetobacter pittii strain WCHAP005069 plasmid pOXA58_005069, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

71. spacer 2.17|373304|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NC_025120 (Acinetobacter sp. M131 plasmid pM131-6, complete sequence) position: , mismatch: 10, identity: 0.706

acgttacacctgtaattacagttagtttgatcaa	CRISPR spacer
ataaaagtgctgaaattacagttattttgatcag	Protospacer
*..  *   *** *********** ********.

72. spacer 2.36|374662|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 10, identity: 0.706

agcattagctgggcgttggccgcaatctggctgg	CRISPR spacer
gggagctaatgggcgttggccgcaagcttgctga	Protospacer
.* * . . **************** ** ****.

73. spacer 2.36|374662|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

agcattagctgggcgttggccgcaatctggctgg	CRISPR spacer
gggagctaatgggcgttggccgcaagcttgctga	Protospacer
.* * . . **************** ** ****.

74. spacer 2.36|374662|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

agcattagctgggcgttggccgcaatctggctgg	CRISPR spacer
gggagctaatgggcgttggccgcaagcttgctga	Protospacer
.* * . . **************** ** ****.

75. spacer 2.50|375666|33|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP042297 (Escherichia coli strain RM9088 plasmid p2RM9088, complete sequence) position: , mismatch: 10, identity: 0.697

cctgtgctgaccagtgcggtggtggcgactact	CRISPR spacer
atggtgctgtctagtgcggtggtggcgcagcca	Protospacer
 . ****** *.***************    *

76. spacer 2.54|375949|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP020899 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5c, complete sequence) position: , mismatch: 10, identity: 0.706

cagctttccggcgcgcctgccaccgccatatctc	CRISPR spacer
cgcttttctggcgcgcctgccgccgccaagtgaa	Protospacer
*. .****.************.****** .*

77. spacer 2.62|376522|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 10, identity: 0.706

aggcagggccaactgcgcgccgtggcggccggtg	CRISPR spacer
ctgcccggccacctgcgcgccgaggcggcctcga	Protospacer
  **  ***** ********** *******   .

78. spacer 2.72|377236|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NC_048144 (Microbacterium phage Schubert, complete genome) position: , mismatch: 10, identity: 0.706

caacacaccatgacaccagcgcaagccctggaca	CRISPR spacer
gcacacatcatgacatcagcgcaagcccgaattc	Protospacer
  *****.*******.************ .. .

79. spacer 2.4|372379|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053901 (Proteus mirabilis strain YPM35 plasmid pJPM35-3, complete sequence) position: , mismatch: 11, identity: 0.676

tctacaacaggtttatctacaacaggtttatcta	CRISPR spacer
ataggaacaggtttagctactacaggtttaatag	Protospacer
 . . ********** **** ********* . .

80. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

81. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

82. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

83. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

84. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

85. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

86. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

87. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

88. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

89. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

90. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

91. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

92. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

93. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

94. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

95. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

96. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

97. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

98. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

99. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

100. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

101. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

102. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

103. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

104. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

105. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

106. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

107. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

108. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

109. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

110. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

111. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

112. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

113. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

114. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

115. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

116. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

117. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

118. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

119. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

120. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

121. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

122. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

123. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

124. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

125. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

126. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

127. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

128. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

129. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

130. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

131. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

132. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

133. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

134. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccgtctcgcgggtcaacgatgcgctgcgctacag	Protospacer
    .* . *******.************* **

135. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

136. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

137. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

138. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

139. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

140. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

141. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

142. spacer 2.15|373162|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gatgttaaggggtcaatgatgcgctgcgcttcac	CRISPR spacer
ccctctcgcgggtcaacgatgcgctgcgctacag	Protospacer
  . .* . *******.************* **

143. spacer 2.36|374662|34|NZ_CP019240|PILER-CR,CRISPRCasFinder,CRT matches to NC_009929 (Acaryochloris marina MBIC11017 plasmid pREB4, complete sequence) position: , mismatch: 11, identity: 0.676

agcattagctgggcgttggccgcaatctggctgg	CRISPR spacer
tcgaggagctgtccgttggccgcaatctgggcac	Protospacer
   *  *****  ***************** ..

144. spacer 2.62|376522|34|NZ_CP019240|CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 11, identity: 0.676

aggcagggccaactgcgcgccgtggcggccggtg	CRISPR spacer
aggcagggccagctgcgcgcagtgaaacaagcca	Protospacer
***********.******** ***. .   * ..

145. spacer 2.111|377236|35|NZ_CP019240|PILER-CR matches to NC_048144 (Microbacterium phage Schubert, complete genome) position: , mismatch: 11, identity: 0.686

caacacaccatgacaccagcgcaagccctggacag	CRISPR spacer
gcacacatcatgacatcagcgcaagcccgaattcc	Protospacer
  *****.*******.************ .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

645003 : 653572

Acinetobacter_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075586132.1\|645003_646194_-	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	2.0e-13	28.7
WP_075586133.1\|646688_647396_-	uracil-DNA glycosylase	P88984	Murid_herpesvirus	4.9e-44	47.1
WP_075586134.1\|647429_648218_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	6.7e-66	55.2
WP_156876194.1\|648214_648370_-	hypothetical protein	NA	NA	NA	NA
WP_075586135.1\|648366_649416_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.6e-75	43.7
WP_075586136.1\|649466_650174_-	LysE family translocator	NA	NA	NA	NA
WP_075586275.1\|650173_651385_-	threonine aldolase	NA	NA	NA	NA
WP_173861795.1\|651445_652021_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.5e-62	60.7
WP_075586137.1\|652048_653572_-	anthranilate synthase component I	S4VNU7	Pandoravirus	5.5e-32	27.7

DBSCAN-SWA_2

1892684 : 1968553

Acidithiobacillus_phage(18.18%)

transposase,tRNA,integrase

attL 1950682:1950741|attR 1975202:1976595

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075587283.1\|1892684_1893467_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_083633972.1\|1893893_1894265_-	hypothetical protein	Q9MCV7	Escherichia_phage	5.6e-31	60.7
WP_139313405.1\|1894250_1895222_+	hypothetical protein	NA	NA	NA	NA
WP_083633966.1\|1895279_1895861_+	hypothetical protein	NA	NA	NA	NA
WP_075587286.1\|1895847_1896267_+	hypothetical protein	NA	NA	NA	NA
WP_156876220.1\|1896324_1896498_+	hypothetical protein	NA	NA	NA	NA
WP_075587287.1\|1896494_1897460_+	Abi family protein	NA	NA	NA	NA
WP_139313406.1\|1897648_1898920_+	hypothetical protein	NA	NA	NA	NA
WP_075587290.1\|1901557_1903003_+	hypothetical protein	NA	NA	NA	NA
WP_139313407.1\|1903302_1904001_+	hypothetical protein	NA	NA	NA	NA
WP_156876222.1\|1904092_1904266_+	DUF4357 domain-containing protein	NA	NA	NA	NA
WP_075587292.1\|1904391_1904652_+	hypothetical protein	NA	NA	NA	NA
WP_075585441.1\|1905214_1906930_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_076072078.1\|1907106_1907667_+\|transposase	transposase	NA	NA	NA	NA
WP_075587294.1\|1907791_1908202_-	hypothetical protein	NA	NA	NA	NA
WP_075587295.1\|1908363_1909392_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_173861803.1\|1909730_1910237_+	TRAP transporter small permease subunit	NA	NA	NA	NA
WP_075587297.1\|1910236_1911559_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_075587298.1\|1911626_1912667_+	TRAP transporter substrate-binding protein DctP	NA	NA	NA	NA
WP_075587304.1\|1912863_1914276_+	ethanolamine ammonia-lyase subunit EutB	NA	NA	NA	NA
WP_083633968.1\|1914272_1915145_+	ethanolamine ammonia-lyase subunit EutC	NA	NA	NA	NA
WP_075587299.1\|1915191_1916409_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_083633973.1\|1916426_1917449_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_083633969.1\|1917513_1918005_-	CapA family protein	NA	NA	NA	NA
WP_139313408.1\|1918007_1918559_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.8e-18	35.3
WP_083633970.1\|1918575_1918782_-	hypothetical protein	NA	NA	NA	NA
WP_076072080.1\|1919640_1921197_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_162274839.1\|1921621_1922371_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_076072086.1\|1922453_1923347_-	glycosyltransferase	NA	NA	NA	NA
WP_076072088.1\|1923997_1925785_-	hypothetical protein	NA	NA	NA	NA
WP_162274840.1\|1926343_1927006_+	calcium-binding protein	NA	NA	NA	NA
WP_076072080.1\|1927223_1928780_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_076072093.1\|1930215_1930536_+	putative addiction module antidote protein	NA	NA	NA	NA
WP_076072096.1\|1930559_1930955_+	hypothetical protein	NA	NA	NA	NA
WP_076072101.1\|1931397_1932165_+	hypothetical protein	NA	NA	NA	NA
WP_076072119.1\|1932270_1932486_+	hypothetical protein	NA	NA	NA	NA
WP_076072121.1\|1932657_1933122_+	hypothetical protein	NA	NA	NA	NA
WP_076072126.1\|1934411_1934777_+	hypothetical protein	NA	NA	NA	NA
WP_076072128.1\|1935118_1936258_+	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_156876226.1\|1936949_1940270_+	DEAD/DEAH box helicase family protein	A0A2K5B2B9	Erysipelothrix_phage	9.0e-205	39.1
WP_076072134.1\|1940266_1944391_+	Eco57I restriction-modification methylase domain-containing protein	A0A2R2ZGH5	Clostridioides_phage	6.1e-09	22.7
WP_076072137.1\|1944465_1945410_+	Bro-N domain-containing protein	NA	NA	NA	NA
WP_076072139.1\|1945529_1946846_+	hypothetical protein	NA	NA	NA	NA
WP_083633936.1\|1947038_1948682_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	8.3e-135	47.7
WP_075587099.1\|1948747_1949545_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	4.0e-66	52.1
WP_075587100.1\|1949608_1949899_+	hypothetical protein	NA	NA	NA	NA
1950682:1950741	attL	NA	NA	NA	NA
WP_075587308.1\|1952975_1954898_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_075587309.1\|1955049_1955322_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	2.1e-19	56.7
WP_075587310.1\|1955557_1956280_-	nitroreductase	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	1.1e-22	31.5
WP_075587311.1\|1956568_1957783_-	NnrS family protein	NA	NA	NA	NA
WP_083633974.1\|1957779_1958526_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	4.3e-22	33.8
WP_075587313.1\|1958513_1959329_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_083633975.1\|1959325_1960315_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_075587315.1\|1960314_1962372_-	TonB-dependent receptor	NA	NA	NA	NA
WP_075587316.1\|1962658_1963648_-	cytochrome-c peroxidase	NA	NA	NA	NA
WP_075587317.1\|1963943_1964873_+	ZIP family metal transporter	NA	NA	NA	NA
WP_075587318.1\|1964908_1965403_+	DNA starvation/stationary phase protection protein	W5S6G8	Pithovirus	4.7e-17	35.9
WP_075587319.1\|1965859_1966174_-	DUF2149 domain-containing protein	NA	NA	NA	NA
WP_156876228.1\|1967386_1968553_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	1.7e-12	28.5
1975202:1976595	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2304678 : 2311577

Acidithiobacillus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075587587.1\|2304678_2305134_+	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	1.0e-50	66.0
WP_075587588.1\|2305130_2306510_+	recombinase family protein	K4ICM1	Acidithiobacillus_phage	5.2e-191	72.3
WP_075587589.1\|2306506_2306869_+	site-specific recombinase resolvase	K4HZX2	Acidithiobacillus_phage	3.0e-37	65.5
WP_075587590.1\|2306877_2307384_+	LacI family transcriptional regulator	K4I1C7	Acidithiobacillus_phage	4.6e-28	50.0
WP_139313419.1\|2307688_2308807_-	hypothetical protein	NA	NA	NA	NA
WP_075587592.1\|2308968_2309640_-	SOS response-associated peptidase	A0A218MNF5	uncultured_virus	6.1e-36	39.6
WP_075587593.1\|2309874_2310261_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.4e-21	50.9
WP_075587594.1\|2310272_2311577_+	translesion error-prone DNA polymerase V subunit UmuC	A0A1W6JNT0	Morganella_phage	3.0e-87	42.4

DBSCAN-SWA_4

2369919 : 2434954

Bacillus_virus(11.76%)

protease,transposase,capsid,integrase

attL 2426953:2426968|attR 2439595:2439610

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076072166.1\|2369919_2371281_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_075587638.1\|2371301_2372513_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_075587639.1\|2372521_2373367_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_075587640.1\|2373374_2374103_-	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	2.8e-18	37.8
WP_075587641.1\|2374109_2374670_-	ribosome recycling factor	NA	NA	NA	NA
WP_075587642.1\|2374722_2375445_-	UMP kinase	NA	NA	NA	NA
WP_075587643.1\|2375508_2376432_-	elongation factor Ts	NA	NA	NA	NA
WP_076072168.1\|2376519_2377272_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_139313436.1\|2377573_2378416_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_075587644.1\|2378426_2379314_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_075587645.1\|2379352_2380819_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_139313427.1\|2380934_2381690_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_075587711.1\|2381808_2384109_-	ribonuclease R	Q0GXV6	Lactococcus_phage	6.7e-66	33.3
WP_075587647.1\|2384328_2385723_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_075587648.1\|2385741_2386281_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
WP_075587649.1\|2386699_2387458_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_075587650.1\|2387548_2389417_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.8e-70	40.0
WP_075587651.1\|2389664_2392010_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-36	32.1
WP_075587652.1\|2392128_2392482_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_075587653.1\|2392624_2395027_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	2.2e-75	37.3
WP_075587654.1\|2395605_2397576_-	type IIA DNA topoisomerase subunit B	G3M9Z3	Bacillus_virus	3.9e-91	34.7
WP_075587712.1\|2397744_2398965_+	MFS transporter	NA	NA	NA	NA
WP_139313437.1\|2399100_2399793_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_075587656.1\|2399674_2400568_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_075587657.1\|2400605_2401691_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_075587658.1\|2402959_2405044_+	ATP-dependent helicase	NA	NA	NA	NA
WP_075587659.1\|2405142_2405709_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_075587660.1\|2405841_2407881_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_075587661.1\|2407908_2409045_+	elongation factor P maturation arginine rhamnosyltransferase EarP	NA	NA	NA	NA
WP_075587662.1\|2409136_2409691_+	elongation factor P	NA	NA	NA	NA
WP_075587663.1\|2409782_2410658_+	TIGR00730 family Rossman fold protein	A0A1D8KUT5	Synechococcus_phage	3.1e-11	33.8
WP_075587713.1\|2410665_2411841_-	MFS transporter	NA	NA	NA	NA
WP_075587714.1\|2411936_2413352_-	DNA recombination protein RmuC	NA	NA	NA	NA
WP_075587664.1\|2413540_2414524_-	D-glycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.3e-10	24.3
WP_075587665.1\|2414528_2415815_-	sodium:proton antiporter NhaD	NA	NA	NA	NA
WP_075587666.1\|2416194_2416533_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_075587669.1\|2418620_2419154_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_075587670.1\|2419181_2419631_-	dUTP diphosphatase	G0YQD9	Erwinia_phage	9.1e-44	63.1
WP_075587671.1\|2419633_2420854_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.4e-33	31.3
WP_075587672.1\|2420967_2422635_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.5e-147	50.2
WP_075587673.1\|2422634_2423492_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	4.7e-49	42.1
WP_075587674.1\|2423551_2424838_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	5.3e-153	64.4
WP_075587675.1\|2424846_2425122_+	septum formation initiator family protein	NA	NA	NA	NA
WP_075587676.1\|2425404_2426223_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
2426953:2426968	attL	NA	NA	NA	NA
WP_075587677.1\|2427123_2428362_+\|integrase	site-specific integrase	A0A077KET4	Ralstonia_phage	9.1e-94	46.6
WP_076072171.1\|2428358_2428799_+	hypothetical protein	NA	NA	NA	NA
WP_075587819.1\|2428917_2429109_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_076072174.1\|2429110_2429545_+	hypothetical protein	A0A2I6UGE7	Salinibacter_virus	2.0e-08	45.6
WP_076072253.1\|2429803_2430556_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_139313455.1\|2430495_2430723_+\|integrase	tyrosine-type recombinase/integrase	S6C485	Thermus_phage	1.2e-07	50.0
WP_075588125.1\|2430719_2431847_+\|transposase	transposase	NA	NA	NA	NA
WP_083639673.1\|2432140_2433298_+	AAA family ATPase	NA	NA	NA	NA
WP_076072180.1\|2433294_2433624_+	hypothetical protein	NA	NA	NA	NA
WP_076072335.1\|2433757_2434954_+\|capsid	phage major capsid protein	F4YCR7	Synechococcus_phage	2.0e-37	32.4
2439595:2439610	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2591173 : 2617180

Ralstonia_phage(12.5%)

portal,capsid,integrase,terminase,protease,head,tRNA

attL 2587448:2587464|attR 2607772:2607788

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2587448:2587464	attL	NA	NA	NA	NA
WP_075587817.1\|2591173_2592412_+\|integrase	site-specific integrase	A0A077KET4	Ralstonia_phage	8.5e-92	47.1
WP_076072187.1\|2592408_2592849_+	hypothetical protein	NA	NA	NA	NA
WP_075587819.1\|2592967_2593159_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_083634053.1\|2593647_2595228_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_075587822.1\|2595224_2595560_+	hypothetical protein	NA	NA	NA	NA
WP_075588021.1\|2595693_2596914_+\|capsid	phage major capsid protein	F4YCR7	Synechococcus_phage	5.9e-37	31.2
WP_075587823.1\|2596917_2597445_+\|head,protease	HK97 family phage prohead protease	A0A1B2APW1	Phage_Wrath	1.7e-28	48.3
WP_075587824.1\|2597441_2598638_+\|portal	phage portal protein	A0A1B0RXK4	Streptococcus_phage	3.9e-57	38.2
WP_083634054.1\|2598646_2599045_+	HNH endonuclease	NA	NA	NA	NA
WP_075587825.1\|2599130_2599613_+	TerS protein	A0A0F7L441	uncultured_marine_virus	1.9e-23	42.4
WP_075588023.1\|2599632_2601132_+\|terminase	terminase large subunit	K7PLY2	Enterobacterial_phage	3.1e-181	63.1
WP_075587826.1\|2601965_2603372_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_075587827.1\|2603373_2604585_-	O-succinylhomoserine sulfhydrylase	NA	NA	NA	NA
WP_075587828.1\|2604587_2606087_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-85	40.6
WP_075587829.1\|2606118_2606607_-	CvpA family protein	NA	NA	NA	NA
WP_075587830.1\|2606623_2607457_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_075587831.1\|2607476_2608793_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
2607772:2607788	attR	NA	NA	NA	NA
WP_075587832.1\|2608863_2609238_+	ArsC family reductase	NA	NA	NA	NA
WP_075587833.1\|2609803_2610121_+	pyrimidine/purine nucleoside phosphorylase	NA	NA	NA	NA
WP_075587834.1\|2610168_2611512_+	argininosuccinate synthase	A0A140XAJ5	Dickeya_phage	2.9e-53	80.2
WP_075587835.1\|2612057_2613107_-	HD-GYP domain-containing protein	NA	NA	NA	NA
WP_075587836.1\|2613105_2613384_+	hypothetical protein	NA	NA	NA	NA
WP_075587837.1\|2613794_2614793_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
WP_075587838.1\|2614912_2615986_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_075587839.1\|2616019_2616505_+	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA
WP_083634023.1\|2616517_2617180_+\|protease	retroviral-like aspartic protease family protein	NA	NA	NA	NA

DBSCAN-SWA_6

2726393 : 2795997

Bacillus_phage(18.18%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075587916.1\|2726393_2729282_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	3.6e-77	26.1
WP_075587917.1\|2729281_2729812_+	lipoprotein signal peptidase	NA	NA	NA	NA
WP_075587918.1\|2729832_2731521_+	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_083634033.1\|2731517_2732648_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_139313447.1\|2732671_2732866_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_075587922.1\|2734033_2735461_+	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA
WP_075587923.1\|2735462_2736431_+	alpha-E domain-containing protein	NA	NA	NA	NA
WP_075587924.1\|2736461_2737268_+	transglutaminase family protein	NA	NA	NA	NA
WP_075587925.1\|2737326_2738070_+\|protease	proteasome-type protease	NA	NA	NA	NA
WP_075587926.1\|2738539_2740243_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_075587927.1\|2740677_2741253_-\|transposase	transposase	NA	NA	NA	NA
WP_075587928.1\|2741333_2741747_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_075587929.1\|2741743_2741980_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_075587930.1\|2742346_2742607_+	PbsX family transcriptional regulator	NA	NA	NA	NA
WP_075587931.1\|2742606_2742969_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A1S5SEX8	Streptococcus_phage	5.3e-10	39.3
WP_075587932.1\|2742978_2743641_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.5e-26	36.7
WP_139313453.1\|2743894_2745721_+	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	8.5e-48	32.4
WP_083634035.1\|2745935_2746601_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_075588043.1\|2746823_2747330_-	cytochrome b	NA	NA	NA	NA
WP_075587935.1\|2747426_2749316_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.1e-16	33.1
WP_075587936.1\|2749486_2752183_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_075587937.1\|2752325_2753093_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_075587938.1\|2753123_2753810_+	ABC transporter permease	NA	NA	NA	NA
WP_075587939.1\|2753809_2754523_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_075587940.1\|2754560_2755691_+	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_075587941.1\|2755693_2756473_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	1.9e-09	29.3
WP_173861813.1\|2756568_2757780_+	carotenoid 1,2-hydratase	NA	NA	NA	NA
WP_075587942.1\|2758179_2758782_-	bacteriochlorophyll 4-vinyl reductase	NA	NA	NA	NA
WP_075587943.1\|2758781_2760470_-	magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase	NA	NA	NA	NA
WP_075587944.1\|2760604_2762149_-	phytoene desaturase	NA	NA	NA	NA
WP_076072203.1\|2762425_2765050_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	4.8e-28	19.8
WP_075587945.1\|2765071_2765341_-	DsrE family protein	NA	NA	NA	NA
WP_075588045.1\|2765420_2765741_-	cupin domain-containing protein	NA	NA	NA	NA
WP_075587946.1\|2765812_2766646_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_075588046.1\|2766790_2767450_+	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA
WP_075587947.1\|2767557_2768148_+	hypothetical protein	A0A1V0CNJ0	Kaumoebavirus	9.2e-28	38.8
WP_075587948.1\|2768165_2769314_-	DUF2157 domain-containing protein	NA	NA	NA	NA
WP_075588047.1\|2769393_2771289_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	7.5e-156	49.5
WP_075587949.1\|2771378_2772548_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_083634038.1\|2772732_2772963_+	AAA family ATPase	NA	NA	NA	NA
WP_173861784.1\|2774802_2776635_+	NERD domain-containing protein	NA	NA	NA	NA
WP_075587953.1\|2776648_2777257_+	ORF6N domain-containing protein	NA	NA	NA	NA
WP_075587954.1\|2778337_2778610_+	hypothetical protein	NA	NA	NA	NA
WP_075587955.1\|2778654_2779719_+	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	9.0e-50	38.9
WP_083634039.1\|2779750_2781331_+	TIGR02391 family protein	NA	NA	NA	NA
WP_075587957.1\|2781456_2781639_-	hypothetical protein	NA	NA	NA	NA
WP_083634040.1\|2781748_2783899_+	NERD domain-containing protein	NA	NA	NA	NA
WP_075585441.1\|2784147_2785863_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_083634058.1\|2785923_2786244_-	putative addiction module antidote protein	NA	NA	NA	NA
WP_075587958.1\|2786370_2787669_-	ATP-binding protein	NA	NA	NA	NA
WP_075587959.1\|2787849_2789082_-	Fic family protein	NA	NA	NA	NA
WP_075587962.1\|2790959_2791295_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_075587963.1\|2791291_2791588_+	XRE family transcriptional regulator	A0A0D5BHH6	Escherichia_phage	6.5e-06	30.9
WP_083634042.1\|2791587_2791791_+	hypothetical protein	NA	NA	NA	NA
WP_075587964.1\|2791830_2792046_+	DUF2283 domain-containing protein	NA	NA	NA	NA
WP_075587965.1\|2792680_2794054_+	hypothetical protein	NA	NA	NA	NA
WP_075587966.1\|2794293_2795997_-\|transposase	IS1634 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

2904310 : 2940148

Virus_Rctr41k(40.0%)

transposase,tRNA,integrase

attL 2901767:2901783|attR 2940434:2940450

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2901767:2901783	attL	NA	NA	NA	NA
WP_075588106.1\|2904310_2906125_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_083634069.1\|2906142_2906778_-	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	1.4e-10	28.8
WP_075588107.1\|2906810_2907149_-	FmdB family transcriptional regulator	NA	NA	NA	NA
WP_075588108.1\|2907203_2908769_-	ubiquinone biosynthesis regulatory protein kinase UbiB	A0A2P0VMP1	Tetraselmis_virus	7.1e-19	25.5
WP_075588109.1\|2908765_2909320_-	hypothetical protein	NA	NA	NA	NA
WP_075588110.1\|2909355_2910333_-	Tim44 domain-containing protein	NA	NA	NA	NA
WP_075588111.1\|2910375_2911107_-	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA
WP_075588112.1\|2911757_2912501_-	response regulator transcription factor	NA	NA	NA	NA
WP_075588113.1\|2912520_2913576_-	histidine kinase	Q9EYF3	Enterobacteria_phage	4.6e-22	36.0
WP_075588114.1\|2913673_2915125_+	argininosuccinate lyase	NA	NA	NA	NA
WP_075588115.1\|2915260_2915782_+	anti-sigma factor	NA	NA	NA	NA
WP_075588116.1\|2915822_2921840_+	alpha-2-macroglobulin	NA	NA	NA	NA
WP_075588117.1\|2922068_2923880_+	AAA family ATPase	NA	NA	NA	NA
WP_075588118.1\|2923932_2926164_+	penicillin-binding protein 1C	NA	NA	NA	NA
WP_075588119.1\|2926317_2927409_-	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_075588120.1\|2927603_2928323_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_075588121.1\|2928319_2929027_+	VOC family protein	NA	NA	NA	NA
WP_083634067.1\|2929508_2929790_+\|integrase	phage integrase N-terminal SAM-like domain-containing protein	NA	NA	NA	NA
WP_076072338.1\|2930784_2931789_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.5e-70	47.2
WP_075588123.1\|2931961_2932336_+	hypothetical protein	NA	NA	NA	NA
WP_075588124.1\|2932432_2932963_+	hypothetical protein	NA	NA	NA	NA
WP_075588125.1\|2933250_2934378_-\|transposase	transposase	NA	NA	NA	NA
WP_083639686.1\|2935850_2935979_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	8.1e-06	51.2
WP_076072253.1\|2935936_2936689_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_139313456.1\|2936760_2937357_+	hypothetical protein	NA	NA	NA	NA
WP_075588127.1\|2937471_2938083_+	DUF91 domain-containing protein	NA	NA	NA	NA
WP_075585441.1\|2938432_2940148_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
2940434:2940450	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3276090 : 3306003

Helicobacter_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075587045.1\|3276090_3277260_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_076072260.1\|3277280_3277532_+	hypothetical protein	NA	NA	NA	NA
WP_083639687.1\|3277818_3278376_-	ORF6N domain-containing protein	NA	NA	NA	NA
WP_076072263.1\|3278450_3278861_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_076072265.1\|3278990_3279401_+	hypothetical protein	S5M810	Pseudoalteromonas_phage	2.7e-10	46.2
WP_162274848.1\|3279379_3280096_+	toprim domain-containing protein	NA	NA	NA	NA
WP_075585014.1\|3280712_3280916_+	hypothetical protein	NA	NA	NA	NA
WP_083639678.1\|3280952_3281576_+	hypothetical protein	NA	NA	NA	NA
WP_156876276.1\|3281572_3282037_+	hypothetical protein	NA	NA	NA	NA
WP_075585441.1\|3282315_3284031_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_076072276.1\|3284414_3284876_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_083639679.1\|3284878_3285502_-	HNH/ENDO VII family nuclease	NA	NA	NA	NA
WP_075585014.1\|3285538_3285742_-	hypothetical protein	NA	NA	NA	NA
WP_083633729.1\|3285731_3286004_-	hypothetical protein	NA	NA	NA	NA
WP_075585015.1\|3285946_3287356_-	toprim domain-containing protein	A0A1S5RH90	Helicobacter_phage	9.6e-15	24.4
WP_075585016.1\|3287490_3287910_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075585017.1\|3287906_3288551_+	ORF6N domain-containing protein	NA	NA	NA	NA
WP_083639680.1\|3288844_3289552_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.7e-07	28.0
WP_075587045.1\|3289765_3290935_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_083639681.1\|3290911_3291553_-	hypothetical protein	A0A0U4J920	Pseudomonas_phage	6.3e-14	35.2
WP_076072283.1\|3292036_3292312_-	hypothetical protein	NA	NA	NA	NA
WP_076072286.1\|3294219_3295890_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_075585441.1\|3295963_3297679_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_156876278.1\|3298143_3298338_-	hypothetical protein	NA	NA	NA	NA
WP_139313266.1\|3298337_3298772_-	hypothetical protein	NA	NA	NA	NA
WP_075585012.1\|3298821_3299409_-	hypothetical protein	NA	NA	NA	NA
WP_139313267.1\|3299408_3300170_-	hypothetical protein	NA	NA	NA	NA
WP_075585014.1\|3300185_3300389_-	hypothetical protein	NA	NA	NA	NA
WP_083633729.1\|3300378_3300651_-	hypothetical protein	NA	NA	NA	NA
WP_075585015.1\|3300593_3302003_-	toprim domain-containing protein	A0A1S5RH90	Helicobacter_phage	9.6e-15	24.4
WP_075585016.1\|3302137_3302557_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075585017.1\|3302553_3303198_+	ORF6N domain-containing protein	NA	NA	NA	NA
WP_075585018.1\|3303510_3303702_-	hypothetical protein	NA	NA	NA	NA
WP_075585019.1\|3304586_3304892_-	hypothetical protein	NA	NA	NA	NA
WP_156876280.1\|3304902_3306003_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.6e-12	28.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019240

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection