CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019388	Winogradskyella sp. J14-2 chromosome, complete genome	4 crisprs	DEDDh,cas1,cas2,cas9,cas3	1	16	2	0

1. NZ_CP019388

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019388_1

• CRISPR_ID: NZ_CP019388_1
• CRISPR_location: 36677-36795
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP019388_1

Consensus_repeat	Method
AAATTCAGAGTTTGAGTAAGTAGAAATTCCGCTTTATTAAATTC	CRISPRCasFinder

spacers of NZ_CP019388_1

>1.1|36721|31|NZ_CP019388|CRISPRCasFinder
CGCTTGAGTGAGAATCCGAGTTCGAGTGGTA

CRISPR arrays and Neighbor proteins around NZ_CP019388_1

CRISPR arrays

The CRISPR arrays of NZ_CP019388_1

>merge|NZ_CP019388|1|36677-36795|CRISPRCasFinder
AAATTCAGAGTTTGAGTAAGTAGAAATTCCGCTTTATTAAATTCCGCTTGAGTGAGAATCCGAGTTCGAGTGGTAAAATTCAGAGTTTGAGTAAGTAGAAATTCCGCTTTATTAAATTC

>NZ_CP019388|1|1|36677-36795|CRISPRCasFinder
AAATTCAGAGTTTGAGTAAGTAGAAATTCCGCTTTATTAAATTC	CGCTTGAGTGAGAATCCGAGTTCGAGTGGTA
AAATTCAGAGTTTGAGTAAGTAGAAATTCCGCTTTATTAAATTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019388.1|WP_076614740.1|32597_33053_-|DUF2750-domain-containing-protein	unknown	unknown	gnl|CDD|378546
NZ_CP019388.1|WP_076614746.1|33844_34324_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614768.1|43926_44415_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_042247321.1|28742_29027_-|putative-addiction-module-antidote-protein	unknown	unknown	gnl|CDD|188241
NZ_CP019388.1|WP_076614761.1|41206_41851_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_157358278.1|38630_39383_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614748.1|35627_36155_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_157358275.1|30530_31133_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614758.1|40358_41048_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_083677120.1|29624_30386_-|serine/threonine-protein-phosphatase	unknown	unknown	gnl|CDD|277316
NZ_CP019388.1|WP_157358279.1|42928_43495_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614696.1|42015_42765_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614736.1|31329_31845_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_083677121.1|34468_35500_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614752.1|37084_37372_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_CP019388.1|WP_076614738.1|31998_32598_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614754.1|37368_37710_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|377579
NZ_CP019388.1|WP_157358277.1|37896_38514_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614701.1|39546_40209_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_157358276.1|33212_33680_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019388.1|WP_076614754.1|37368_37710_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|377579	pfam05973, Gp49, Phage derived protein Gp49-like (DUF891). This family consists of hypothetical bacterial proteins of unknown function as well as phage Gp49 proteins.	1.82529e-13
NZ_CP019388.1|WP_076614740.1|32597_33053_-|DUF2750-domain-containing-protein	gnl|CDD|378546	pfam11042, DUF2750, Protein of unknown function (DUF2750). This family is conserved in Proteobacteria. The function is not known.	5.53273e-35
NZ_CP019388.1|WP_083677120.1|29624_30386_-|serine/threonine-protein-phosphatase	gnl|CDD|277316	cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.4532e-26
NZ_CP019388.1|WP_042247321.1|28742_29027_-|putative-addiction-module-antidote-protein	gnl|CDD|188241	TIGR02684, conserved_hypothetical_protein, probable addiction module antidote protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the downstream member of a gene pair. It is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, are located often with prophage regions, but also both in integrated plasmid regions and in housekeeping gene regions. Analysis suggests that the gene pair may serve as an addiction module. [Mobile and extrachromosomal element functions, Other].	7.44392e-34
NZ_CP019388.1|WP_076614752.1|37084_37372_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.74448e-11

Protein sequences

>NZ_CP019388.1|WP_076614748.1|35627_36155_-|hypothetical-protein
MIKTNIFTTRKLEKTTNEFISSEVSIENEFLGNWTATLFYVSNKKCWLIINKLTKYLVIIPNVKKSDLKNISTIFKKTLYFQLNNDGIKTDYTLVDKIIGEINLCETNNDGSTSGSLNNCLFQMDDWKKDYGTYDNMPFRDLNNKLNSSPNKMLNWKYPKEKMDEMIKAYAQHRI
>NZ_CP019388.1|WP_083677121.1|34468_35500_-|hypothetical-protein
MKINTLIILITFALITSCNGQKQDKDKSSTKYRTYGGELSRPVESEIQINNSLTLDQFNETNIEILKRYISGNPRWEIRKEKKFRTPYEVTYAIRKEERNGIYETTLNGYYSDFYGDSDIYQTRVIISFGNYFGQGRDTTHITYAGTKDNSIKTIIESEHSGTPGNSSYLILQGNSINIEIYEQSKKLERNFTNQTIQEVNTELSMVLNNLNEIERNGVSPIKKFYPIQLNSNYFEIEDGMQPGIYVVKAGLSTNTKGIVYVKVFNSKTNERLSADRMTPRTTREIGWSKDGKTIFPYESELTVYEGDWSHKYKVRFEIWFRSSEGDEIKLTEKERIINGWER
>NZ_CP019388.1|WP_076614746.1|33844_34324_-|hypothetical-protein
MKKHSWKILSLILILYFGFELFKEYHPTFYGTSFNDERIKIGLVPIDSTLIKKGENTYVYQSWKNESENVPRFYAKYASFDKWNKGIEMENDNYVVMVDSLKTIVSINYNFRTKKFNYELKEYNRPKNTSDLYGHSGKTIRVLTKNETAEILNNNGIKY
>NZ_CP019388.1|WP_157358276.1|33212_33680_-|hypothetical-protein
MNKIKVLTIVFIFGIFGCGKMNSDGTEKRIAERIAKHIIEKDSLKNYTYSGDIFLHIKSERLNDKNYKTLISLNGLKSKSTEFRAERINIDGFETIIYYDKSKSEYNLPEPFFVPDSKGWSFLAELIEDEIVLRKLELEVSIDKNETEELDEIDF
>NZ_CP019388.1|WP_076614740.1|32597_33053_-|DUF2750-domain-containing-protein
MFQDSITLKNRHQKFIKTVSENGIVYGLKSKNGFATSSSTQFEDDDGNPIGMICFWAEKVRAKSCAKDEWKKYNVTEIPLAEFMENWCVGMANDGLLIGTQFDQNLFGHEIEPLDLILELTSELKSIGKDLNFRKFNGIADLEKQVKESKN
>NZ_CP019388.1|WP_076614738.1|31998_32598_-|hypothetical-protein
MNFDLEDKLNEYVKRNDLDSAIKIAESELSKIPETEFHQLIGMNLLHLESELSEFISKFYSSVKLKYTFSFSKKLKAFYCEMNGFTINYDRWFIDLFSFSEIGNEDYEWLADFEHHTNKDLTIIGFENLQKVYEDVYRNQKFDIPEIEQAYEVSELLIILRLQELFRETYKKAKESEKKWSNYPMFVTAHDYEMIYKIN
>NZ_CP019388.1|WP_076614736.1|31329_31845_-|hypothetical-protein
MKTAFTIILTLIGFLSFGQENELNSIEKTELDSIYVKALNNRFDLLLSSGWKYIELNEIGQRISKLNVSDRYKFLTNEELIDLSIKQKKTIRILRLTHKIIGIDTVDVNFGIVNVTGKRKIHFNNGLKFKKADFALDCGGTNGYVPDMRFVFDRKKNNWELIDGKYKIPTE
>NZ_CP019388.1|WP_157358275.1|30530_31133_-|hypothetical-protein
MLILFVGYVLTNMFRTKSLTEKEKAIIPYEKNDELIFESNKSDIDTIKITELTLVKRPPNLGDMFWAKNTELLRVHTNNSDCKSCDELIYLDTENFSFDTNIRWNIRINGKNYVHGTNLEEINELNTTKLNVNGIEYDDVVVLERSKRFERPKDKFSKMFYKGIYPIDKLYWSKSYGIIQFEIVETNEIWKLKNAVQQGV
>NZ_CP019388.1|WP_083677120.1|29624_30386_-|serine/threonine-protein-phosphatase
MGLNRRKWLKQIFVTTFGLVIFKDKSFANNDSELKNELMDYFIIGDVHGCYYTLVEILKKWNSEKEYLIFVGDLIDRGNFSTLVVKKCREIEQNYNNCIIIKGNHELEFVEYVINGENKNWIEQCGQKTINEFKKQKIDIEETSSWFMNLPLKFETNNILVTHAGISESNNPYNENNMHGVLWNRKELKNIGKLQIHGHTPLMKNEPKFNESSNSWNIDTGSCYGYGITGIKISKSGKLKSTIIINTNEKDIA
>NZ_CP019388.1|WP_042247321.1|28742_29027_-|putative-addiction-module-antidote-protein
METTKFDIADYLDSEEMIAEYLNTVLEDGESSDLIVAIGHIAKAIGMTKIAEKTGMSRPSLYKALSEGAKPQFGTIMKVLKAIGGQINVKPMSA
>NZ_CP019388.1|WP_076614752.1|37084_37372_-|helix-turn-helix-transcriptional-regulator
MKSYTLDQAEDLLIGKKGTEERDEYEFELKLELIGDMIKTARKKRKLTQEQLGELVGVKKAQISRLENSTGNVTFETVMRIFNALGAKLNLNLQM
>NZ_CP019388.1|WP_076614754.1|37368_37710_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MIKRFETKLLSEAFEFIEKQNLKARKKIFQNIRRAEQQSDPKFFKKLTDEIWEFRTLYSGNQYRLLAFWDKEDKSETLVFATHGIIKKTSKVDKKEINKADRIRKEYFKNKKK
>NZ_CP019388.1|WP_157358277.1|37896_38514_-|hypothetical-protein
MKSTIGKIFKNPTIFSILGIILIFIGLPIGINGLTLNGGGSLGGAIIIFGVLIVGLIVILDRIFANRVNIKKLNGIELTLLIVGITIFSFTKREIIIDLRDKKTDYFVVLENNGTLKNSKLNYSFPFNKKMEFKDNVGIINSIADNYQRIELESPNNWKSQRMQPWKMDDFKIRFYSNGDLRLTDKEVDSIIKNEIKTVANNGYK
>NZ_CP019388.1|WP_157358278.1|38630_39383_-|hypothetical-protein
MNIEERKPIWIALSDFYLDTELQESDFRHIAFKIIESPYSFEKVKEINKYEVFPVLQPNLMSVAGEWAGFDEKWLVDSITESLAKRNAVKKIGIGSSYLTLKWMCKDYWEKLEKVYQELKSNPESYIVTCKELWKSNIEPFEYLENKPELQNKLERIALNHKNRNKLSDFYQYLQEGQYWINLWTAYFLLEVFKLKKSDKLIGLNNEAGIIDFCIETVEKNQPYLEKEIAKSNCEKWIKNKKTAYNNGYK
>NZ_CP019388.1|WP_076614701.1|39546_40209_-|hypothetical-protein
MRNRITLILTLSLLLSSCEFTINTNNSKNVDLGKMPKVESKTFENLYVADEKICESKELPITRFAIEYPNGYDVETPNDKENHIVMKKTIENIVVEELSIGNSTITLKNKNLTLTLIENVADNLKKQFPEMEILTVGKKEFNGEMNYLFEGKVDYSDFIEQGYNGVYKIMFVIPLPKENEELNAVMISMIANEQSEIKTFADFTNKGMIGKVYKTFRYIE
>NZ_CP019388.1|WP_076614758.1|40358_41048_-|hypothetical-protein
MRQIKTFSDSRLDTQCAYCGKYPDTRDHVPSKILLEKPYPENLPVVPSCLDCNNGFSLDEEYFACLIECLISGTTDLDKLSRESIVKTLKRKTKLKARLDDAFVNENGKSHFKIEPERIENVILKLAYGHVKFENSDRQWEKPEHIAFVPIDTLSEDELNSFFAVTELQKAPEIGSRAMQNMYLTQDGIPIDNWNIVQDGIYQYSVTPTIGSVKVRILIWNYLVCEVIW
>NZ_CP019388.1|WP_076614761.1|41206_41851_-|hypothetical-protein
MKNTIFLILFLISSVGFSQNIFKKEIQLRKSNKIKETSFYIEYPKGKKHLKKIELYDRNGLLIELKKFDGNGNIAERLTFEYPNDQTRILTEYDKNDSLVTSYNQKFDSSDILEPNKRKSDSKKFKYKYDKEGNLTEVWRLDLKKPLIQTESFYNEQNRLIKQRLLIFEMFPKKYYYLTTEYKLDEDGNILEIKSIKNGKKKNTETREHKKYST
>NZ_CP019388.1|WP_076614696.1|42015_42765_-|hypothetical-protein
MIKFFRKIRQNLLSEGKTRKYFKYAIGEIILVMIGILLALQVNNWNNNRIEQNEEKEVITKLHTDFQENKKVLKDFLIEVNNQMNAQITLMNLIGTSKEELSKHNLDSIFYVSFGYSEIAFADNTIKNIIQSGKLNLLKNEQITDLLYKWNTLSEIRKTRVTKLDNWSNNELIPYLLDKISFKQMDMASNYPWAGSSKVKPDYYPLFQEVKFENYLDNNIWYYQQVKERCLETDKLIDEIIKATKPNTN
>NZ_CP019388.1|WP_157358279.1|42928_43495_-|hypothetical-protein
MKYLYLILLSSLFMSCGVFKNRPENLVKVNSENASKLNGTYSIFALDKLKSEYPYYHNANNKFYRKYGRGQSDTISFDTIIGGRFKIKIIDKQNLRIDFLKENDTIKSQKIEYKFKNDGFLYLKNRNTIIRGIPYLFGGVDVKKVRIALNQNNDLILNDIFDSSGALLLIFGDAKVWEETNTYERLDE
>NZ_CP019388.1|WP_076614768.1|43926_44415_-|hypothetical-protein
MKIEEIKEKFDIDVGAPTPTILSNELNLYLIFYVSNVDPNWDGKSIHMRTDQDDGIITIKFDLFEQFKFGSPNDEAMSGHPLYELGLKPYSIQKVIDSEWIKQLKKINSVHPYHKDELFEKYKHFIFFFHDTCFEIVAESYSIEQNSELNLRDEIQRISKLL

Crispr_ID: NZ_CP019388_2

• CRISPR_ID: NZ_CP019388_2
• CRISPR_location: 146275-146382
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP019388_2

Consensus_repeat	Method
ACTCGCTTCTCGATACAATTTGCT	CRISPRCasFinder

spacers of NZ_CP019388_2

>2.1|146299|60|NZ_CP019388|CRISPRCasFinder
TAAGCTTCGCTTAGGTATCTTCAATCAAAATGTATTTTGATTTCGATAGTTTCGCAAATC

CRISPR arrays and Neighbor proteins around NZ_CP019388_2

CRISPR arrays

The CRISPR arrays of NZ_CP019388_2

>merge|NZ_CP019388|2|146275-146382|CRISPRCasFinder
ACTCGCTTCTCGATACAATTTGCTTAAGCTTCGCTTAGGTATCTTCAATCAAAATGTATTTTGATTTCGATAGTTTCGCAAATCACTCGCTTCTCGATACAATTTGCT

>NZ_CP019388|2|2|146275-146382|CRISPRCasFinder
ACTCGCTTCTCGATACAATTTGCT	TAAGCTTCGCTTAGGTATCTTCAATCAAAATGTATTTTGATTTCGATAGTTTCGCAAATC
ACTCGCTTCTCGATACAATTTGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019388.1|WP_076614988.1|149916_150648_-|hypothetical-protein	unknown	unknown	gnl|CDD|369356
NZ_CP019388.1|WP_076614998.1|156462_157851_+|phosphoglucosamine-mutase	unknown	unknown	gnl|CDD|274906
NZ_CP019388.1|WP_076614977.1|143607_144528_+|hypothetical-protein	unknown	unknown	gnl|CDD|197273
NZ_CP019388.1|WP_076614982.1|147939_148926_-|endonuclease/exonuclease/phosphatase	unknown	unknown	gnl|CDD|197338
NZ_CP019388.1|WP_076615000.1|157863_159369_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|223594
NZ_CP019388.1|WP_076614993.1|154088_155792_-|gamma-glutamyltransferase	unknown	unknown	gnl|CDD|223482
NZ_CP019388.1|WP_076614972.1|140082_140412_+|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl|CDD|198395
NZ_CP019388.1|WP_076614959.1|128632_129634_+|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl|CDD|274625
NZ_CP019388.1|WP_083677127.1|139780_139936_+|DUF1737-domain-containing-protein	unknown	unknown	gnl|CDD|369860
NZ_CP019388.1|WP_076614990.1|150734_154004_-|S41-family-peptidase	unknown	unknown	gnl|CDD|143478
NZ_CP019388.1|WP_076614985.1|149291_149816_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614967.1|135206_138281_+|hypothetical-protein	unknown	unknown	gnl|CDD|284995
NZ_CP019388.1|WP_076614995.1|155788_156391_-|DUF479-domain-containing-protein	unknown	unknown	gnl|CDD|377311
NZ_CP019388.1|WP_076615002.1|159377_160271_-|lysophospholipid-acyltransferase-family-protein	unknown	unknown	gnl|CDD|153246
NZ_CP019388.1|WP_076614961.1|132293_133244_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_157358290.1|147774_147921_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614980.1|145055_145856_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076614964.1|133538_135206_+|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl|CDD|280533
NZ_CP019388.1|WP_076614974.1|140567_143570_+|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl|CDD|223683
NZ_CP019388.1|WP_083677126.1|131755_132046_+|DUF2188-domain-containing-protein	unknown	unknown	gnl|CDD|378323

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019388.1|WP_076614988.1|149916_150648_-|hypothetical-protein	gnl|CDD|369356	pfam07419, PilM, PilM. This family contains the bacterial protein PilM (approximately 150 residues long). PilM is an inner membrane protein that has been predicted to function as a component of the pilin transport apparatus and thin-pilus basal body.	0.00252722
NZ_CP019388.1|WP_076614998.1|156462_157851_+|phosphoglucosamine-mutase	gnl|CDD|274906	TIGR03990, Arch_GlmM, phosphoglucosamine mutase. The MMP1680 protein from Methanococcus maripaludis has been characterized as the archaeal protein responsible for the second step of UDP-GlcNAc biosynthesis. This GlmM protein catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate. The first-characterized bacterial GlmM protein is modeled by TIGR01455. These two families are members of the larger phosphoglucomutase/phosphomannomutase family (characterized by three domains: pfam02878, pfam02879 and pfam02880), but are not nearest neighbors to each other. This model also includes a number of sequences from non-archaea in the Bacteroides, Chlorobi, Chloroflexi, Planctomycetes and Spirochaetes lineages. Evidence supporting their inclusion in this equivalog as having the same activity comes from genomic context and phylogenetic profiling. A large number of these organisms are known to produce exo-polysaccharide and yet only appeared to contain the GlmS enzyme of the GlmSMU pathway for UDP-GlcNAc biosynthesis (GenProp0750). In some organisms including Leptospira, this archaeal GlmM is found adjacent to the GlmS as well as a putative GlmU non-orthologous homolog. Phylogenetic profiling of the GlmS-only pattern using PPP identifies members of this archaeal GlmM family as the highest-scoring result. [Central intermediary metabolism, Amino sugars].	0
NZ_CP019388.1|WP_076614977.1|143607_144528_+|hypothetical-protein	gnl|CDD|197273	cd09176, PLDc_unchar6, Putative catalytic domain of uncharacterized hypothetical proteins with one or two copies of the HKD motif. Putative catalytic domain of uncharacterized hypothetical proteins with similarity to phospholipase D (PLD, EC 3.1.4.4). PLD enzymes hydrolyze phospholipid phosphodiester bonds to yield phosphatidic acid and a free polar head group. They can also catalyze transphosphatidylation of phospholipids to acceptor alcohols. Members of this subfamily contain one or two copies of the HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) that characterizes the PLD superfamily.	9.6198e-13
NZ_CP019388.1|WP_076614982.1|147939_148926_-|endonuclease/exonuclease/phosphatase	gnl|CDD|197338	cd10283, MnuA_DNase1-like, Mycoplasma pulmonis MnuA nuclease-like. This subfamily includes Mycoplasma pulmonis MnuA, a membrane-associated nuclease related to Deoxyribonuclease 1 (DNase1 or DNase I, EC 3.1.21.1). The in vivo role of MnuA is as yet undetermined. This subfamily belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.	2.05725e-06
NZ_CP019388.1|WP_076614993.1|154088_155792_-|gamma-glutamyltransferase	gnl|CDD|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
NZ_CP019388.1|WP_076614972.1|140082_140412_+|GIY-YIG-nuclease-family-protein	gnl|CDD|198395	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	5.22791e-46
NZ_CP019388.1|WP_076614990.1|150734_154004_-|S41-family-peptidase	gnl|CDD|143478	cd07562, Peptidase_S41_TRI, Tricorn protease; serine protease family S41. The tricorn protease (TRI), a member of the S41 peptidase family and named for its tricorn-like shape, exists only in some archaea and eubacteria. It has been shown to act as a carboxypeptidase, involved in the degradation of proteasomal products to preferentially yield di- and tripeptides, with subsequent and final degradations to free amino acid residues by tricorn interacting factors, F1, F2 and F3. Tricorn is a hexameric D3-symmetric protease of 720kD, and can self-associate further into a giant icosahedral capsid structure containing twenty copies of the complex. Each tricorn peptidase monomer consists of five structural domains: a six-bladed beta-propeller and a seven-bladed beta-propeller that limit access to the active site, the two domains (C1 and C2) that carry the active site residues, and a PDZ-like domain (proposed to be important for substrate recognition) between the C1 and C2 domains. The active site tetrad residues are distributed between the C1 and C2 domains, with serine and histidine on C1 and serine and glutamate on C2.	1.54417e-79
NZ_CP019388.1|WP_083677127.1|139780_139936_+|DUF1737-domain-containing-protein	gnl|CDD|369860	pfam08410, DUF1737, Domain of unknown function (DUF1737). This domain of unknown function is found at the N-terminus of bacterial and viral hypothetical proteins.	0.000184893
NZ_CP019388.1|WP_076614959.1|128632_129634_+|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl|CDD|274625	TIGR03519, bacteroidetes-specific_membrane_protein, type IX secretion system membrane protein, PorP/SprF family. This model describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that have type IX secretion systems (T9SS) and exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility.	1.30962e-42
NZ_CP019388.1|WP_076614967.1|135206_138281_+|hypothetical-protein	gnl|CDD|284995	pfam07693, KAP_NTPase, KAP family P-loop domain. The KAP (after Kidins220/ARMS and PifA) family of predicted NTPases are sporadically distributed across a wide phylogenetic range in bacteria and in animals. Many of the prokaryotic KAP NTPases are encoded in plasmids and tend to undergo disruption to form pseudogenes. A unique feature of all eukaryotic and certain bacterial KAP NTPases is the presence of two or four transmembrane helices inserted into the P-loop NTPase domain. These transmembrane helices anchor KAP NTPases in the membrane such that the P-loop domain is located on the intracellular side.	3.18292e-29
NZ_CP019388.1|WP_076614995.1|155788_156391_-|DUF479-domain-containing-protein	gnl|CDD|377311	pfam04336, ACP_PD, Acyl carrier protein phosphodiesterase. YajB, now renamed acpH, encodes an ACP hydrolase that converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP.	5.51867e-47
NZ_CP019388.1|WP_076615002.1|159377_160271_-|lysophospholipid-acyltransferase-family-protein	gnl|CDD|153246	cd07984, LPLAT_LABLAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins.	5.64489e-50
NZ_CP019388.1|WP_076615000.1|157863_159369_+|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	1.78892e-76
NZ_CP019388.1|WP_076614964.1|133538_135206_+|type-I-restriction-modification-system-subunit-M	gnl|CDD|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	3.80708e-110
NZ_CP019388.1|WP_076614974.1|140567_143570_+|type-I-restriction-endonuclease-subunit-R	gnl|CDD|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	6.2441e-180
NZ_CP019388.1|WP_083677126.1|131755_132046_+|DUF2188-domain-containing-protein	gnl|CDD|378323	pfam09954, DUF2188, Uncharacterized protein conserved in bacteria (DUF2188). This domain, found in various hypothetical bacterial proteins, has no known function.	4.16857e-12

Protein sequences

>NZ_CP019388.1|WP_076614980.1|145055_145856_-|hypothetical-protein
MARNNSFIKLEGTLDGLTFYNKDGNNLVKTKNQVSRNRIMNDPAYKRTRENMQEFGGAARCSKALRESFASIVRLVADTYLSARITGKVRSVVPNGAGLRGERNINLVDNLEPFIGFQFNLSKPFDSQFNAPSTGPVIDASRDKVSWSIPDFNTDTYIKKPEGATHCKLALAAGYVSNYEWDPALKSYEPVEDTPNGAGEIVYSDAIALGAMVGTDTDLTLNLTTYGPIPVTTALFAGTAIVFFQMVNGELYELAQGHSMKIATAG
>NZ_CP019388.1|WP_076614977.1|143607_144528_+|hypothetical-protein
MSTFLTGEALESKLTDIIWEAKKYVVIVSPFIKLDEHTKAILDKIKHTPKIALYIVFGKNEESKYNSFKEEDFNYFKEFKNIVILYNKNLHAKHYANESEGLITSLNLYGYSMVNNIEYGVYFAKTPLNPIDRLYEETYNYTHQLVHKLSDVVFLKKPQFSKALFGLKKDNMGSRVIFDVTSNFFNYSNNYEKKCFDDFDIETETIIQKKFDTKPTRNLDSNTSKTIKRNKKLTNENLGYCIRTGERIPYNPEQPMSLEAWKVWNQYKDYDFPENYCHKTGKKSNGRTSMANPILTYQTKWTNDPW
>NZ_CP019388.1|WP_076614974.1|140567_143570_+|type-I-restriction-endonuclease-subunit-R
MTTEATIEQATIDWLEDLGYTHKDGTAIAHHPKDVVLKDVLLAFIQKTYPQLSPELQTLAVGEFTNNVGADLEHRNRSFHLKCTKGIDLDYEDAQGNEKAVHIYPIDFEHPENNSFWAVNQFTITGKNKRRPDIIIYINGLPLIVFELKNWYDQNTNLKEAHNQIEHYIKDIPQLFEYNALTIISDGNEAQHGMFSSGMEWFAPWKSINGKETVQEDDFQMHTLLFGLFPKERLLNYIKNFIFHEDHNGSLIKKGAKYHQFFGVNFAVEAAKQSVRPFGDGRIGVIWHTQGSGKSISMAIYTGILRSLPELKNPTIVVQVDRSDLDMQLYENFVLAKDLVGEVQHAESTNDLRQLLSAGAGGVIFTTIEKFRLKQTTDDALGELEHPVLSERENIIVMADEAHRTQYGLLDGFASNLRKALPKASFIGFTGTPVDSKDADTEEVFGNVIHTYDIKQAVEDKATVNIYYEPRLAKLHLWNEDIDKDADNILWEQEDTGNLKWAAIEDAAGSEDRVNKIAKDILQHFTKRIATLDGKAMVVCMSRRNCVKMYNALTALEDCPEVAVVMTGNISKDPIEWNEHIRTKDATEALKKRFRNLDDPLKIVIVRDMWLTGFDAPCVHTMYVDKIMKGHNLMQAITRTNRVFKDKENGVIVDYIGIGDNLKTATDKYTGGGGKGRPTIDMEQALELFFNQVEVCKAMLPETVDYSNWKALREADKVLLVKNAVNHLVKDEDEAKGFMKEEKKLSGLLSIVKSQPAIQEFAVEVIFAQHVSKAVRNATTVTSPRGGEKDMIRELISQSIESENIVDVFAMAGIEKPDISILDETFLLGAKKEKDGNALKIEIIKNILKNEIKLRLHKNIKKYTSLKEELEKVIDKYHNNALDSYATIVELVERAQELQKDDKRTEELGLSEEELAFYDILAAKQDIIKEKGPMQDIVHGVVKAVKSNLQLDWTKKENAKAAIRLAVKKELRGKVSIAKLNDILAEIMEQAEGQFSDWSA
>NZ_CP019388.1|WP_076614972.1|140082_140412_+|GIY-YIG-nuclease-family-protein
MKPGFVYILTNKNNTTLYTGVTANLVQRLKQHKDKTDKKSFAAKYNLNKLVYYESFQMIGDAIAREKQIKAGSRAKKIKLIESINPNWDDLTETVKRHYADVGRSNFMM
>NZ_CP019388.1|WP_083677127.1|139780_139936_+|DUF1737-domain-containing-protein
MEYKVLCYIEVSGLVEAVNSDIKKGWLPQGGVSYARTDGISNYHMQAMIKT
>NZ_CP019388.1|WP_076614967.1|135206_138281_+|hypothetical-protein
MKLKKSINKVASSIFNKKMLFSAILFVSFFYFQYAIISFIEKYLTINNNFSNSYLDVIIMVVVFIWTVYTLYKLIAYNYKPSFSQKLTVATAIFLIVYFQQNRENLPWDYLKDSFFNIEYIQYVFISLSVVVYFFLVINFFQKLEYLFPTSRFNFNKGDNTYLSDDPVLDEKKDLLSYGPKIKSLTNILLNENFEKSIAIGLVGPWGNGKSSVIEMSQKQLKTIESYHDRVVIHFLPYLNHKEEDIINEFFIALSNQISKFNGKLSSQILDYAKKLTDVYKGGNAFNLFEKHVTTIDQSSAKELYDNINKRLKEIDKKIIVFVDDLDRLSGKEIIQILKLIRNTADFRNTIFVVAMDKDYVVKRLKAENNISSTRFIDKFFQLEIYLPEIDKNILRKFVYEKLNQSVLNSTSDFKSKLERGINHKDNLFEDYIKNLRDAKRLVNQIIFDYNFLREEINFKDFMNFTYFKLKFPKFMELLNHNRLDFLKLENGQYKLKEKPPKNDEKSEKKYVPTLDNIVLLGNTEYNDYSFLDKYAVSELLSQEEDCLKKLLGIDCDDALLLSKTLAYLFGDQNKKETFNSIKEAQNFKMLMQQRVFENVLTEREFNLVIHEGDIEKRHEILENLHTQNKFLQLLDRLDYYNTDKHLILSQITLVLFRLYEKRTDYNITDQQLLNRIAVYVERLIQDNDKVNQEQVNWMKADIFEGNLLSTENKLNILGELWEAKEDNNLWHLTEEYISKKTLELFKKYLSKHHNQLWSVTDFSFYKYYHLLKHIDGLKEALNKEIRTFWSKNNIELLCAQSTDTPAFSLSSFQISNTVSEIFGSIRKYHEFVKNHSKNPSRATKEFLELYELHAITGYVVPIVYNFKNSRLMLDKIKNKVEIPGRGSYDEDANITQLVFKTNSKELIEELIEIRKRQNANDNLLLSTTYKVNISTENFPSMRFASFSSGEFHYLFINHDKKFRLNFAIEILKALEAIASNMFTINNKNFRPWRRKIVDKELIKLTDEVTLQLISLQSAQSTQL
>NZ_CP019388.1|WP_076614964.1|133538_135206_+|type-I-restriction-modification-system-subunit-M
MSKLKTKADINFEQELWKAANELRGAVAENQYKDYVLPLIFLKHLSERYQARKDELIEAFNDESSDYYTQDPDERQYILEDPDEYLSKNTYIIPNEATWQFLQDNAEQDNIKVLVDDAFDMLDDTLAQYRPDLKGILPRIFVKSQLTPKQVAGLINLLANPKLSENENPGSDILGRVYEYYIGKFAIAEGSGAGQFFTPSSIVRLMVEMIEPYQGKIFDNACGSGGMFVQSLKFLQAHGGDKKNISIYGQERYDGTLRLCKMNLALRDLSFDVRLGDSLLQDKFPDLKADYIIVNPPFNVSQWHPEDLPENDPRLFGPKEEFTTDGNANFMWMQTFWSHLSDRGTAAVVMANGAMTSNNKGEKNVRQFMVDNGMVDCIVRLPDKLFLTTGIPACIFILSKNRDGKDGEHRERLNEVLFIDMSKLGRMESRKLRVFDEADLQKATDTYHAWRNSNNTTNVTSSDSRGTRELYREANDTTASQLYENIDGFCYSATIEEIAKQDYKLTPGIYVGTEAVEDDGIPFEDKMETLKAQLQTQFAKGNELQQQILENFKKF
>NZ_CP019388.1|WP_076614961.1|132293_133244_+|hypothetical-protein
MKRFMYSILVMFSFAAQAQAPFTTLAMEPTYVKATRTGSDDSEKRYERVDIVKLIKAEKDKGTLSSFSMTDFKEQIMDDADIEPTEDTNEVGFFKSSSLALNVLNNADSRASINAQVLFYKINFMTPVDSIASNWRYNLPVMIISKLSTSYDSISGASAIDVLDYEAAPVTLRIMPSFKISGNKKYKEELLFGIYADARGINVQNTETNDYDLEVVGSGGIGFTLTGHGEAGIYNKQGDYEKGEWLVSAMLQGAVGDADVIQKLFNTDKDFVTSFQSYFSFNIAEGSKFNLKIGYQHYFQETIAGTKNNFSIALGL
>NZ_CP019388.1|WP_083677126.1|131755_132046_+|DUF2188-domain-containing-protein
MPKQNTLADAVQQLITAILNALGYNAAPKRTWHQHVVPYEDGWAVRREGNQRVTSKHRKQGTAIRKAKTLAKRYNADVIIHRASGGIRKRMSYRHR
>NZ_CP019388.1|WP_076614959.1|128632_129634_+|type-IX-secretion-system-membrane-protein-PorP/SprF
MTLRPIFTFIILICCWTVSAQDPVFTQSNYIQETLNPAFSGFEDNDRIAAGILSRVQWPNLDLQIHTQYAYVNKSYDYGPSLGFGVGINAVWQYESFNNYNYAQVNLNYAHRINLNNGWYFRPAIEVGVGNKSNRFRNLTLADQININSGFINPVSVDPLASRLNSIYFLDINAGFIVERQTFNDISYWIGGSVRHLNRPNISIVEGEKLPLDIFYSFHGNVRFPFLHDNTIMMTTNLMVQGPYNRLDVGTIFQLDAILLGLTAATNPARNDGNAHLLTSVNAFVGFEYQTFRFGFSYDKNTSNIGRTDGVYELSMTYLSRCRRCNTDRSRKK
>NZ_CP019388.1|WP_157358290.1|147774_147921_+|hypothetical-protein
MNTLQKLRLRLLKTGTRTSTLPEPKVELSPKAKDANKTVKDDDAFMFI
>NZ_CP019388.1|WP_076614982.1|147939_148926_-|endonuclease/exonuclease/phosphatase
MDYHITFWNLENLFDIEHTPRRTEKLQRAIGSDVKGWGPTQLNQKLEQLNRIIIQLNDGNGPDILGVCEVENAHVLHMLIQKMGMLNRNYALVHADSDDRRGIDVAFIYDADLFSVEEENGEPKVFDHFVLRRTATRDILQVNFLTRHSQSQQRLVLIANHWPSRSGGQYESEGYRQIAGETLSYFHQRIREIHGDDTPVMAMGDFNDEPFNESLTRFAIALRSRARVVRGRIPYFLNLMWSLMDYGTASFYFGNKPNMLDQFLANENMLKSNSKIKVVSNSVGIERFPEMVKPGAYGVPVNFGGMGKKINSNGFSDHYPISVKLRES
>NZ_CP019388.1|WP_076614985.1|149291_149816_+|hypothetical-protein
MKLLGIGSRINHAEHGKGVVTNVTSKHYWVTFIDKGLETLELDDDFEVIEAAEDDVDTVSFYEVEKSLKSILKKWSDVSEVVSIADKWKGGKLILEPGDTNLQGKELPIDTFFHKITMVRDRLRVMEQKINSSSLDEQEKIDLQQYITRSYGSLTSFNVLFKLKSQQFVGQRSK
>NZ_CP019388.1|WP_076614988.1|149916_150648_-|hypothetical-protein
MPKSSKTKRIFKIIGGLIVFFTLPTLLFFGFMYLKYNEDLPQGQQGTKADQLATTMLNALNEEAYLNTDYLEWTFKGGHHYKWYKTDNTCEVSWDAITVILDFNDSDNSKVFAGQQEYNGVEKQDYINKATDYFNNDSFWLVAPYKVFDKGTERRLVISEEGKPSLLVTYTKGGSTPGDSYLWHLDDNGRPKSFQMWVDILPIDGLEASWDQWTTTESGAKLPTTHKFLVFDLDMGDVKGLKF
>NZ_CP019388.1|WP_076614990.1|150734_154004_-|S41-family-peptidase
MKNHIAVVALCASIFSFSQGTQLLRQPTLHGDDVVFVYANDLWKSSLNGGTAIRLTSDEGYESNPHFSNDGKLIAFTAQYDGNVDVFVMPAEGGEPKRLTYHPGGDFVQGWTPDGKVLFRSGREAQPTMTNKFFTVSTDGGMPEALDIPRAAYGEMSPDGNHLAYTPITGWDAEWRNYRGGQAMPIWVVDLKTKDLVRTSQPTKERHLDPVWLNGLVYFMSERDYTMNIWSFNPSTKEEKQVTFHKKFDVKSLDASNDKLIYEQGGYLHVYNPSTNKTKQLNIDVKADLNFYRTKWDNVSARQLINPNVSPTGKRAIFEHRGEIFTVPKENGTWKNITNSPGVADRNPIWSPNGDKIAWFSDKSGEYQLMLADQNGDNTEAISLPNPTFYFQPDWSPDGKHIAYTDTHYNVWIINLETKKTKKIDTDRYAHPNRSMNPVWSPDSKWIAYAKQQDNHFKAIFVYNIDSKKVIQITDPIADAITPVWDKSGKYLYTLASTNYGLQSGWLDMSNYDPSANLTRSLYAIVLSKDDKAPNLPKSDMEEAKKENDDKKEDKKDDKKEDKKSSDGVTVTIDEDGIFDRAVALSLPDRNYIALLKGPENKVFIAEAIPNARGLKVHEYDVEKEKASDFADSVSQMVASNDRKSILLSQNGNWVLTSTSAPPKPGKDNLKIDIKIKLDPKAEAHQIFKEGWRYMRDFLYVDNVHGAPWDDVYEWYAPWIDHVRHRTDLNYVVDIMSGEVAVGHSYVSGGDFPDVDRVAVGLLGCDFEKTNGNFKISKIYTGERWNPNIDAPLAKPGIAIKEGDYILAINGKTLDSKTNPYALLEQTAGREITIMVNSEPTLTNARSVLVKPVSNERGLRSIDWIEGNRRKVDELSNGKLAYVYVPNTGGGGFTAFNRYYFAQQDKKGVVIDERNNGGGSAADYMMDIMSREIYGYFNSKAGDKRPWTTPIAGIWGPKVMLINERAGSGGDLLPYMFKMKNLGPLIGTRTWGGLVGTWDTPPFIDGGRMVAPRGGFYDVNGKWAVEGEGVAPDIEVIQHPKETSKGNDPQLERAVQEALKLLKGNEFQLQPEPKAPVRWKRPNGYKSDN
>NZ_CP019388.1|WP_076614993.1|154088_155792_-|gamma-glutamyltransferase
MKNRFTLLLILFNLIACKDAARQQKTEVNTRGTIAEKAMVVSARKEASEIGVQILKLGGNAFDAMMATEMALAVTYPYAGNLGGGGFLVFRLADGTKGALDYREKAPLASTKDMYLDDNGNVIKNLSTVGSMAIGVPGTIAGIFEAQQKYGKLDVKTVLKPVIELANNGFVVTQKQAKRFAAYDSIFTQVNKKQILFNKSIKAGDTIRNKALAQTLQRISDHGRNEFYLGKTSEILVSFLQSEGSIITLEDLKKYEAKWRNPVTFEYDDLTMTSMSPPSSGGICLGQIMKMIEPFDLNDYGHNALKTIQVIVEAEKRAYADRSYYLGDPDFVDIPTETLLSDVYLQDRMNNFSFEKPTPSDSLSHGNIVGYESDETTHYSIVDQFGNAIAVTTTLNGAYGSKLYAEELGFFLNNEMDDFSSKPGEPNYFGLIGAEANSIAPEKRMLSSMTPTIVEKEGELYMTVGTPGGSTIITSVLQTILNVHEFGFTMQNAVDAPRFHHQWLPDEIRMEPNGFDNKRIKELEALGYNVNLKRSPVIGKVDGILVLDDGTLEGGADHRGDDTAVGF
>NZ_CP019388.1|WP_076614995.1|155788_156391_-|DUF479-domain-containing-protein
MNFLAHIYLSGDDELLTIGNFVADGIRGNKYKLYPEKIQAGILLHRAIDTFTDAHPIFRQSTKRLHKNYGHYSGVIVDIFYDHFLAKNWKHYSNIPLAKYIDHFYQSLNDNFEILPDRFKHLAPLMIEGNWLLSYAKIEGIQQVLNGMNRRTKGKSKMNEATKELKEYYSEFEHEFTLFFEELRAYSNSKLIELKKQFEP
>NZ_CP019388.1|WP_076614998.1|156462_157851_+|phosphoglucosamine-mutase
MTLIKSISGIRGTIGGAVEDNLTPIDAVKFAAAYGTWLKQQRNKDNYRVVVGRDARISGEMIQSLVMHTLVGMGIHVIDLGLSTTPTVEVAVPMEHADGGIILTASHNPKQWNALKLLNHKGEFLNGVEGKKILDIAASNDMTFAEVDDLGKITKNDAYIDLHIDEVLNLPLVNKKAIEAANFKVVVDGVHSTGGIAIPLLLERLGVEPVKLYCEPTGQFPHNPEPLKEHLGDLAKAVVKEHADFGIVVDPDVDRLAFMDEKGEMFGEEYTLVACADYVLSKNSGNTVSNMSSTRALRDVTEKHGGTYEASAVGEVNVVELMKKNNVVIGGEGNGGIIYPELHYGRDALVGVALFLSLLAEKKMSVSALRATYPNYYMSKKKIQLTPQLDVDAILKTMETNYSHETLTTIDGVKIDFADSWVHLRKSNTEPIIRIYTEAQSQEAADDLADRFIAEIKAIANI
>NZ_CP019388.1|WP_076615000.1|157863_159369_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MISEATTHNTSTLEAYFEQFRKHIVGQDQTFMSPFGEQKIIYTDWTASGRLYRPIEEKLLNEFGPFVANTHTETTVSGTAMTKAYHKAKHIIKDHVNANEDDVLIVTGNGMTGVVNKFQRILGLKIPENLRDYTTVPDEMRPVVFISHMEHHSNQTSWLETIAKVEVVPPDDNGLFCLKNLEALLEQYKDRTLKICSIVGGSNVTGIQTPYHKAAKLMHQHGGVCFVDFACSAPYVDINMHPEDEDEQLDAIFFSPHKFLGGPGTSGVLVFNKKLYHNMVPDCPGGGTVSWTNPWGEHKYIDNIEDREDGGTPGFLQTIKTALSIKLKEQMGVSNILEREHELIDIIFDKLQPISNINILAGQHKDRLGVISFYIDDLHYNLGVKLLNDRFGIQTRGGCSCAGTYGHFLLHVDQQTSKELTDEISIGDLVRKPGWIRMSIHPTTTNEEIAYVCNSIVDLAKNHQEWAKDYEYSRCNNEFIHKSLIDKPCNATNVEGWFNLD
>NZ_CP019388.1|WP_076615002.1|159377_160271_-|lysophospholipid-acyltransferase-family-protein
MQLIAYIIIYPFLWLISILPFRLLYGLSDVLYIFLYKIFGYRKSTVKENLRLVFPDKSEKEIAMITSQFYHHLCDMIVESIKSMTISESEMKKRYKFSNVELINDLGSKQRSIVLMCAHYGSWEWVFILQTYIQHKGYAVYKRLRNKYFDKLIKRIRAKYNSHLITTKDTFTVLAESKKKGELTINGFASDQSPKANKAFHWSEFMGIKVPMHTGAEMLAKRLDMAVVFFSVKRLKRGFYETTFTTITENPKDYKDYEITDIFFKLVEQQINEAPQYYLWTHKRWKHRNKVPETFKD

Crispr_ID: NZ_CP019388_3

• CRISPR_ID: NZ_CP019388_3
• CRISPR_location: 550806-552549
• CRISPR_type: orTypeII
• Repeat_type: NA
• Spacer_info: 25 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NZ_CP019388_3

Consensus_repeat	Method
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	CRISPRCasFinder
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	CRT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	PILER-CR

spacers of NZ_CP019388_3

>3.1|550842|29|NZ_CP019388|CRISPRCasFinder,CRT
TGTAAAAGGATTTGGAAAAGCTCTGCAAA
>3.2|550907|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TTGAACTCTGGAACTAAAAAACCGCCCAAA
>3.3|550973|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TACGCTGACGTTGTAGGCTAATTGAGCAGA
>3.4|551039|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
ACGACTGCAATGAACCAGTACCAGGTATCG
>3.5|551105|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
AAAGGCGAAGAGTGATGAATCTAGTAATAT
>3.6|551171|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
ACGTTTACCAAACACCTCTTGTTTTGCTGC
>3.7|551237|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TGTTATTGTTTCGTTAATTATTGGACGATT
>3.8|551303|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
GGCGGCCACCAAGAGGACGAAGATATAGAA
>3.9|551369|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TAAAAGCATAGGCATATTCACTTTTAAACT
>3.10|551435|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TGGATAAGCTGATATCTTTACACGATTTCC
>3.11|551501|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TGCTCATCCTCTGCCACCTTCGTTATTGCT
>3.12|551567|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
GGATTCATAGTTGCATCTGTGAAGGTTGTT
>3.13|551633|31|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TACTAGGATCCGCTGTTGGGATTTGTCAAAA
>3.14|551700|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
CACAGTTGAAGTTAGTCAGCCAACGGCAGC
>3.15|551766|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
AGGTAGAACGCCGTCTTGTCTTTCTGTATA
>3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
AATCTATTTTCAATAATAAATAGTTTTTGC
>3.17|551898|29|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TGTATCTAATGATAATTTGTCTATTGTTT
>3.18|551963|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TAGACATCATCACACAAGCCAAACGTTTTT
>3.19|552029|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
CACCTCTTGATAATCATCTAATGTTCCTCC
>3.20|552095|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
TATGCGACCTGTGGTTTGCTGATTTTGTTG
>3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
AACTTTTGATCATATAATACCATTAAGTAA
>3.22|552227|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
AATAAAGATGCTGATACTATTACACCAGAA
>3.23|552293|29|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR
GTTAACGATAATAGCATGGACTGTATATG
>3.24|552358|30|NZ_CP019388|CRISPRCasFinder,CRT
AAGTAATTTGTTGTGACACCAGAACCGCCA
>3.25|552424|90|NZ_CP019388|CRISPRCasFinder
CAGTAAGATTCACAAACACACCGATTAAAATAAAATGAGGTGTTTGTAAACCACTTTAACACTCAAAAGCAGTATCGCGCTGGCAACTAC

CRISPR arrays and Neighbor proteins around NZ_CP019388_3

CRISPR arrays

The CRISPR arrays of NZ_CP019388_3

>merge|NZ_CP019388|3|550806-552549|CRISPRCasFinder,CRT,PILER-CR
AATATCGTGTTTTCTAATCTTTAATCAAACCACAACTGTAAAAGGATTTGGAAAAGCTCTGCAAAAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTTGAACTCTGGAACTAAAAAACCGCCCAAAAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTACGCTGACGTTGTAGGCTAATTGAGCAGAAATATCGTGTTTTCTAATCTTTAATCAAACCACAACACGACTGCAATGAACCAGTACCAGGTATCGAATATCGTGTTTTCTAATCTTTAATCAAACCACAACAAAGGCGAAGAGTGATGAATCTAGTAATATAATATCGTGTTTTCTAATCTTTAATCAAACCACAACACGTTTACCAAACACCTCTTGTTTTGCTGCAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTGTTATTGTTTCGTTAATTATTGGACGATTAATATCGTGTTTTCTAATCTTTAATCAAACCACAACGGCGGCCACCAAGAGGACGAAGATATAGAAAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTAAAAGCATAGGCATATTCACTTTTAAACTAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTGGATAAGCTGATATCTTTACACGATTTCCAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTGCTCATCCTCTGCCACCTTCGTTATTGCTAATATCGTGTTTTCTAATCTTTAATCAAACCACAACGGATTCATAGTTGCATCTGTGAAGGTTGTTAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTACTAGGATCCGCTGTTGGGATTTGTCAAAAAATATCGTGTTTTCTAATCTTTAATCAAACCACAACCACAGTTGAAGTTAGTCAGCCAACGGCAGCAATATCGTGTTTTCTAATCTTTAATCAAACCACAACAGGTAGAACGCCGTCTTGTCTTTCTGTATAAATATCGTGTTTTCTAATCTTTAATCAAACCACAACAATCTATTTTCAATAATAAATAGTTTTTGCAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTGTATCTAATGATAATTTGTCTATTGTTTAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTAGACATCATCACACAAGCCAAACGTTTTTAATATCGTGTTTTCTAATCTTTAATCAAACCACAACCACCTCTTGATAATCATCTAATGTTCCTCCAATATCGTGTTTTCTAATCTTTAATCAAACCACAACTATGCGACCTGTGGTTTGCTGATTTTGTTGAATATCGTGTTTTCTAATCTTTAATCAAACCACAACAACTTTTGATCATATAATACCATTAAGTAAAATATCGTGTTTTCTAATCTTTAATCAAACCACAACAATAAAGATGCTGATACTATTACACCAGAAAATATCGTGTTTTCTAATCTTTAATCAAACCACAACGTTAACGATAATAGCATGGACTGTATATGAATATCGTGTTTTCTAATCTTTAATCAAACCACAACAAGTAATTTGTTGTGACACCAGAACCGCCAAATATCGTGTTTTCTAATCTTTAATCAAATCGAACGCAGTAAGATTCACAAACACACCGATTAAAATAAAATGAGGTGTTTGTAAACCACTTTAACACTCAAAAGCAGTATCGCGCTGGCAACTACAATATCGTGTTTTCTAATCTTTAATCAAATCGAACA

>NZ_CP019388|3|3|550806-552549|CRISPRCasFinder
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGTAAAAGGATTTGGAAAAGCTCTGCAAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TTGAACTCTGGAACTAAAAAACCGCCCAAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TACGCTGACGTTGTAGGCTAATTGAGCAGA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	ACGACTGCAATGAACCAGTACCAGGTATCG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AAAGGCGAAGAGTGATGAATCTAGTAATAT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	ACGTTTACCAAACACCTCTTGTTTTGCTGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGTTATTGTTTCGTTAATTATTGGACGATT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GGCGGCCACCAAGAGGACGAAGATATAGAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TAAAAGCATAGGCATATTCACTTTTAAACT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGGATAAGCTGATATCTTTACACGATTTCC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGCTCATCCTCTGCCACCTTCGTTATTGCT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GGATTCATAGTTGCATCTGTGAAGGTTGTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TACTAGGATCCGCTGTTGGGATTTGTCAAAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	CACAGTTGAAGTTAGTCAGCCAACGGCAGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AGGTAGAACGCCGTCTTGTCTTTCTGTATA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AATCTATTTTCAATAATAAATAGTTTTTGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGTATCTAATGATAATTTGTCTATTGTTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TAGACATCATCACACAAGCCAAACGTTTTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	CACCTCTTGATAATCATCTAATGTTCCTCC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TATGCGACCTGTGGTTTGCTGATTTTGTTG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AACTTTTGATCATATAATACCATTAAGTAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AATAAAGATGCTGATACTATTACACCAGAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GTTAACGATAATAGCATGGACTGTATATG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AAGTAATTTGTTGTGACACCAGAACCGCCA
AATATCGTGTTTTCTAATCTTTAATCAAATCGAACG	CAGTAAGATTCACAAACACACCGATTAAAATAAAATGAGGTGTTTGTAAACCACTTTAACACTCAAAAGCAGTATCGCGCTGGCAACTAC
AATATCGTGTTTTCTAATCTTTAATCAAATCGAACA

>NZ_CP019388|3|1|550806-552423|CRT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGTAAAAGGATTTGGAAAAGCTCTGCAAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TTGAACTCTGGAACTAAAAAACCGCCCAAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TACGCTGACGTTGTAGGCTAATTGAGCAGA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	ACGACTGCAATGAACCAGTACCAGGTATCG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AAAGGCGAAGAGTGATGAATCTAGTAATAT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	ACGTTTACCAAACACCTCTTGTTTTGCTGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGTTATTGTTTCGTTAATTATTGGACGATT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GGCGGCCACCAAGAGGACGAAGATATAGAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TAAAAGCATAGGCATATTCACTTTTAAACT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGGATAAGCTGATATCTTTACACGATTTCC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGCTCATCCTCTGCCACCTTCGTTATTGCT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GGATTCATAGTTGCATCTGTGAAGGTTGTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TACTAGGATCCGCTGTTGGGATTTGTCAAAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	CACAGTTGAAGTTAGTCAGCCAACGGCAGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AGGTAGAACGCCGTCTTGTCTTTCTGTATA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AATCTATTTTCAATAATAAATAGTTTTTGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGTATCTAATGATAATTTGTCTATTGTTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TAGACATCATCACACAAGCCAAACGTTTTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	CACCTCTTGATAATCATCTAATGTTCCTCC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TATGCGACCTGTGGTTTGCTGATTTTGTTG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AACTTTTGATCATATAATACCATTAAGTAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AATAAAGATGCTGATACTATTACACCAGAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GTTAACGATAATAGCATGGACTGTATATG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AAGTAATTTGTTGTGACACCAGAACCGCCA
AATATCGTGTTTTCTAATCTTTAATCAAATCGAACG

>NZ_CP019388|3|1|550871-552357|PILER-CR
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TTGAACTCTGGAACTAAAAAACCGCCCAAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TACGCTGACGTTGTAGGCTAATTGAGCAGA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	ACGACTGCAATGAACCAGTACCAGGTATCG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AAAGGCGAAGAGTGATGAATCTAGTAATAT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	ACGTTTACCAAACACCTCTTGTTTTGCTGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGTTATTGTTTCGTTAATTATTGGACGATT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GGCGGCCACCAAGAGGACGAAGATATAGAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TAAAAGCATAGGCATATTCACTTTTAAACT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGGATAAGCTGATATCTTTACACGATTTCC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGCTCATCCTCTGCCACCTTCGTTATTGCT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GGATTCATAGTTGCATCTGTGAAGGTTGTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TACTAGGATCCGCTGTTGGGATTTGTCAAAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	CACAGTTGAAGTTAGTCAGCCAACGGCAGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AGGTAGAACGCCGTCTTGTCTTTCTGTATA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AATCTATTTTCAATAATAAATAGTTTTTGC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TGTATCTAATGATAATTTGTCTATTGTTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TAGACATCATCACACAAGCCAAACGTTTTT
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	CACCTCTTGATAATCATCTAATGTTCCTCC
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	TATGCGACCTGTGGTTTGCTGATTTTGTTG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AACTTTTGATCATATAATACCATTAAGTAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	AATAAAGATGCTGATACTATTACACCAGAA
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	GTTAACGATAATAGCATGGACTGTATATG
AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019388.1|WP_076621236.1|562873_563311_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076621233.1|547782_548193_-|hypothetical-protein	unknown	unknown	gnl|CDD|176906
NZ_CP019388.1|WP_076615804.1|544914_546045_+|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl|CDD|379297
NZ_CP019388.1|WP_076615850.1|560996_561947_+|3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl|CDD|240628
NZ_CP019388.1|WP_076615857.1|563339_563834_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076615826.1|550280_550610_+|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP019388.1|WP_076615807.1|546329_546743_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076615810.1|546833_547112_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_083677245.1|547279_547588_-|DUF1801-domain-containing-protein	unknown	unknown	gnl|CDD|378058
NZ_CP019388.1|WP_076615798.1|539043_541845_+|LPS-assembly-protein-LptD	unknown	unknown	gnl|CDD|224369
NZ_CP019388.1|WP_157358303.1|548243_548828_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076615854.1|562048_562684_+|DUF937-domain-containing-protein	unknown	unknown	gnl|CDD|368733
NZ_CP019388.1|WP_076615801.1|544191_544572_+|reactive-intermediate/imine-deaminase	unknown	unknown	gnl|CDD|129116
NZ_CP019388.1|WP_076615834.1|553134_556539_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|187774
NZ_CP019388.1|WP_076615830.1|552667_553138_-|hiran-domain-protein	unknown	unknown	gnl|CDD|214906
NZ_CP019388.1|WP_076615845.1|559913_560975_+|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl|CDD|235428
NZ_CP019388.1|WP_076615823.1|549405_550290_+|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NZ_CP019388.1|WP_076621235.1|558740_559799_+|acyl-CoA-reductase	unknown	unknown	gnl|CDD|368656
NZ_CP019388.1|WP_076621234.1|558312_558666_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|274171
NZ_CP019388.1|WP_076615840.1|557354_558104_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP019388.1|WP_076615823.1|549405_550290_+|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	2.6e-87	287.2	8.9
NZ_CP019388.1|WP_076615826.1|550280_550610_+|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	1e-29	97.8	0.0
NZ_CP019388.1|WP_076615834.1|553134_556539_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	2.3e-93	308.8	25.4

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019388.1|WP_076621233.1|547782_548193_-|hypothetical-protein	gnl|CDD|176906	cd08897, SRPBCC_CalC_Aha1-like_4, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins. SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of a functionally uncharacterized subgroup of CalC- and Aha1-like proteins. This group shows similarity to the SRPBCC domains of Micromonospora echinospora CalC (a protein which confers resistance to enediynes) and human Aha1 (one of several co-chaperones which regulate the dimeric chaperone Hsp90), and belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	5.80425e-75
NZ_CP019388.1|WP_076615801.1|544191_544572_+|reactive-intermediate/imine-deaminase	gnl|CDD|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	2.59408e-53
NZ_CP019388.1|WP_076615804.1|544914_546045_+|carboxypeptidase-regulatory-like-domain-containing-protein	gnl|CDD|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	5.35446e-06
NZ_CP019388.1|WP_076615850.1|560996_561947_+|3-phosphoglycerate-dehydrogenase	gnl|CDD|240628	cd05303, PGDH_2, Phosphoglycerate dehydrogenase (PGDH) NAD-binding and catalytic domains. Phosphoglycerate dehydrogenase (PGDH) catalyzes the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDH comes in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence.	9.95961e-148
NZ_CP019388.1|WP_076615834.1|553134_556539_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|187774	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Very large protein containing McrA/HNH-nuclease related domain and a RuvC-like nuclease domain; signature gene for type II.	9.53239e-82
NZ_CP019388.1|WP_076615826.1|550280_550610_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	3.0711e-25
NZ_CP019388.1|WP_083677245.1|547279_547588_-|DUF1801-domain-containing-protein	gnl|CDD|378058	pfam08818, DUF1801, Domain of unknown function (DU1801). This large family of bacterial proteins is uncharacterized. They contain a presumed domain about 110 amino acids in length.	1.93951e-10
NZ_CP019388.1|WP_076615854.1|562048_562684_+|DUF937-domain-containing-protein	gnl|CDD|368733	pfam06078, DUF937, Bacterial protein of unknown function (DUF937). This family consists of several hypothetical bacterial proteins of unknown function.	1.61517e-26
NZ_CP019388.1|WP_076615798.1|539043_541845_+|LPS-assembly-protein-LptD	gnl|CDD|224369	COG1452, Imp, Organic solvent tolerance protein OstA [Cell envelope biogenesis, outer membrane].	1.20852e-14
NZ_CP019388.1|WP_076615830.1|552667_553138_-|hiran-domain-protein	gnl|CDD|214906	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. HIRAN is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes. It has been predicted that this protein functions as a DNA-binding domain that probably recognises features associated with damaged DNA or stalled replication forks.	3.77005e-10
NZ_CP019388.1|WP_076615845.1|559913_560975_+|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl|CDD|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
NZ_CP019388.1|WP_076615823.1|549405_550290_+|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	8.93743e-97
NZ_CP019388.1|WP_076621235.1|558740_559799_+|acyl-CoA-reductase	gnl|CDD|368656	pfam05893, LuxC, Acyl-CoA reductase (LuxC). This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalyzed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components.	4.45365e-05
NZ_CP019388.1|WP_076621234.1|558312_558666_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|274171	TIGR02512, Periplasmic_hydrogenase_large_subunit, [FeFe] hydrogenase, group A. This model describes iron-only hydrogenases of anaerobic and microaerophilic bacteria and protozoa. This model is narrower, and covers a longer stretch of sequence, than pfam02906. This family represents a division among families that belong to pfam02906, which also includes proteins such as nuclear prelamin A recognition factor in animals. Note that this family shows some heterogeneity in terms of periplasmic, cytosolic, or hydrogenosome location, NAD or NADP dependence, and overal protein protein length.	0.00143388

Protein sequences

>NZ_CP019388.1|WP_076615826.1|550280_550610_+|CRISPR-associated-endonuclease-Cas2
MELNAYRIMWLFVFFDLPTETAKDRRNASGFRKNLIKDGFTMMQYSVYMRHCASSESADVHEKRIKRLLPPLGKVSILRITDKQFGNIMNFWGRAEVPKEPLPTQLELF
>NZ_CP019388.1|WP_076615823.1|549405_550290_+|type-II-CRISPR-associated-endonuclease-Cas1
MLKKTILIEQKSKITSKNLQLNIKNEFREGSIPIEDIGFLVVDNAETYISITALNQLVNNNTAVIICNKSHLPNGMVLNLNSHHIQQELFKAQINASVPLKKQLWQQTIKHKIKNQGTLLGKVTNTKNNFEFLASKVKSGDSTNMEAVAASLYWKSFFNHNFKRERFGEYPNNFLNYGYAILRAATARALSGSGLLNTLGIHHKSKYNAFALADDIMEPFRPLVDEAVYSIVQHYDDQELNTQMKSILLKILTRTVFFKNEKSTLMVALQKTASSLQQCYTGKRKKIKYPLLWN
>NZ_CP019388.1|WP_157358303.1|548243_548828_-|hypothetical-protein
MKKNLFPIFAIGLMTISCNAQQKTPEFEIETEKWKKELLASGEVGNPCREDNDWQKWQEENPKAYFGLQEIQSSESDFNSDGIRDGLFYFPAENCVGGNGTGSDFGMLVYSKDGQFLTNKNITQTIENGIKTELAKIDINDLYKIYIHYKGLGKTIIGDYYAWSEDDANCCPGGTGTFEYSPTEFTTEIKNRTE
>NZ_CP019388.1|WP_076621233.1|547782_548193_-|hypothetical-protein
MESITVQTSIKSDLDRVWDYWTRPEHITNWNFATDAWCCPNAENDLRPNGNFCWRMEAKDGSMGFDFTGTYDKIIDKALISYKMSDGRNVAIAFLQNGDEVNVRETFDAEGTHTDEQQRAGWQAILENFKKYVETQ
>NZ_CP019388.1|WP_083677245.1|547279_547588_-|DUF1801-domain-containing-protein
MPGITPMLKTIDSLIHDAIPNLHYAIKWGNAYYGTDALGWLIEVAAYEVSANIVFLNGAAFDPQPPLGTGETRYIKLKTLDEVNDARVIDFIKQAANYNGWQ
>NZ_CP019388.1|WP_076615810.1|546833_547112_-|hypothetical-protein
MIKFFRKIRQNLLMENKIGKYFKYAIGEIVLVVIGILIALQINNWNEQRKEHSKEQALLKRLEKEFISNRNQLLDKIELRHTLIENCRQLLD
>NZ_CP019388.1|WP_076615807.1|546329_546743_-|hypothetical-protein
MVSSGHIDILKDETLKQLLVNWSTDVIQLQEVEQVFFRFCEQRIYPHLNAIGIQRDVAYTHWKDAPKNLLESKQVKNLIPGTSKLITRTTNELLKDYKLEGKVAWALTLNVFNNQESETLMKRINRILEVIESQIKN
>NZ_CP019388.1|WP_076615804.1|544914_546045_+|carboxypeptidase-regulatory-like-domain-containing-protein
MKKSLALLFVLVFAFSCSKEQSNDSSGDYNITGKFLTPNGLDPVAKASVKLYKDGTLIQDALTDSEGNFILNNLTKDSYELSISKGQFKTSTSANLSDLIDALTFNLDSLPINQLPSIAVVTGSYDHIEEVLYNIGLVDPITEQPLFDIIDGQDIANRNVHHGHHQSNASAKRTNPMLAPNVDFGFGEFIESPTLLGNYDIIFLNCGLNETKTDFGNNLNDYVNNGGLLYATDWAYAYLNFITQGGADYLSFYNPEKSGTSLSTDAEILDQTLIDWLDLNFGIQVPNATVTIDEFLGGWQVVDTYNAATVIPWLYGPIEYDGISENKHLAYTFLHGNGGVLYSSFHTENNTTDATTVERLMQYMVFELADIKVQVQ
>NZ_CP019388.1|WP_076615801.1|544191_544572_+|reactive-intermediate/imine-deaminase
MKTIINTPNAPAPIGPYNQAVLVNNTLYTSGQIALHPKTMQLVMDTIEAETKQVMENMKAVLAAADMTFNNVIKTSIFISDMHNFAKINAVYATYFNEDTAPARETVEVANLPKFVNVEISMIAVK
>NZ_CP019388.1|WP_076615798.1|539043_541845_+|LPS-assembly-protein-LptD
MAFQKPSHNFTKIHLKGLRTNSLHILFALSFTVFINTLSLAQELPKKNEGIPSEQKTDTTVVAKDRIEILADSLLNPPVSTKTVDSTKNDSLKKEGFLKDVVTYKAKDYVAINQKKQQIRLFNEAVVQYEDMEIKAGIIVIDYSKNLVYAGRLKDSTGYSQKPVFTQGANVIEPDSIIFNTDSRKALIFNSVTEQSGGTVIAERTKRENDSVYFISRGKFTTSENLEDPEYYILMNKAKIVPNKKIVTGMSQMYIYDVPTPIALPFAFFPMSKKQTSGIIFPSFGEDTGNDRGYFLQNGGYYFAISDYVDLAVLGDYYTNGSYGIRLQSNYAVRYKFRGNFGFRYEKLLNSERGFPDFRESTIYNIRWSHSQDAKANPNSRFSASVNLGSSQFFSQSINQANLANTLTNTLASSVSYSKTFQGEPQVNLNLTATHNQNTNTEAINLTLPTMQASMTRVFPFAPKSGTKKGAIQNINFQVNTRGEYRIQTTDSLFGKSEMFDDAVAGVRHSIPVTTNFKVFNHFSASVNANFDENWTFSTVKRNTIFEDETSEAIKINGFDRFLTYNFGTSIGTTLYGMFNFKKKDNNPKIQAIRHVMRPSISYSVSPAFDQYYETYDVIDADGTTIDQVEYTRFENSLFGRPGNRYSSNIGIDIGNNFEAKVRSKDSTETEPKKIFLLNNLNLRANYDLAADSLNWSDVTVSGGTQILNKKMNINFGMRLNPYALDSNNNIINTFNINNGGSLFRMTSANLNISYSLNNDSFSGKDKEEERDEEAERNSATANARADDLFGVSQDFADQRLGDRKKEKSDVEEENNDFYNYKMPWSLRLSYVANYNNTRRQNEITSHSLMFSGDVELSPRWSIGASSGYDFLNQGFTFTQLRFERDLLSWRMNFSWIPFGRNQSWNFFIGIKSNLLKDLKYDQRRQPDRQLGN
>NZ_CP019388.1|WP_076615830.1|552667_553138_-|hiran-domain-protein
MKRLDFIKAFGLGSTGLVIPQTNFAQKPIKIYDNYIKGLTHYDLNKVKKQMSVGDALLLRRERENIYDSFAVAVFYDTKKLGYLPAYENVVISNLLEQGVKLNGFVSKLNLQDVYQAVSIEIYANIVVESPSMIQTDLLEHRADDAIDKYRKGPFF
>NZ_CP019388.1|WP_076615834.1|553134_556539_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MAKTLGLDLGANSIGWALIDDVDNKILGIGSRIFQEGVVNLGEGEGREASKNASRTDDRGTRRQFYRRRLRKRYLLRELAKHNMCPLDYKAVKIWNQKEIFGNESIQAWLRLNPYELRAKAIKEELTLEELGRVFYHMIQRRGFQSNSRSVGADNNEKSVIYKGDSKIGKIGIAETSESIKHAETLGTYLNEIYPKENAPFVGGLERIRNRYTTRQMYIDEFETIWEHQKQYHKALTDNLKTIFGGRKKDGYAEDGVLFHQRPLRSQKHLVGNCTFEPKKTKCPISAIPNEQRRVYEWVNTLKCDLAGEPVRITDADREKIVKLLFSKEKVKFKEVRKAIDKLDRHYQFNYKDDDPVVGTHTISNLSNKKFFGKQWFDLTEKEQEDIWHVLYSFDDRDKLKQYAIEHWGFDDGRAEKISKFNLKEGYANLSRKAINNILPFLQLGFTYDVAVALGGVKNVLGNDWETHKAFVLDNVPEIVHSNLKGGYIDPLKAVLKKECNVSDKALKKLYHHSSAIDTNVLLERLPLGVDADKEIQNIKNPVVITALFEIRKLVNEIIDDYGKPDEIKVEMARDLKISKSKRNDIRREQKRLERENDRVKAELDYIGQRHTHDNILKYKLWEECNKTCPYTGRNIEVNQLFSGEVQIEHIHPWSKSLNDSFMNKTLCFADENRAKGDKTPYEFYSKQGEQKWNDIKLQALSCFKNKPPNYPNAYKKFKQFVKQKHDNDFISRQLNDTRYISKEAKNYLSKICDKVMVAPGQMTSNLRHHWGLNTILNQDDNVKTRADHRHHAIDALVMACATRGHLQELSKWNRYDRRYDLEHFPKPWTTFREDAEQAIEQILVSHKKQKSILTVRTHTTKKGNKTYKNIGVAARGQLHKETVFGKRQAPNSEEAYHIRKPIDSLTTEKQLEKVVDETIKQLIFKRIHFLGGFEKGKIPSETFFVVDENGLKQPQIFLPNRKGNPVPVLKVRMKENIGGAEQLKDDTNQWVNPRNNHHVIIYKNESGKLQEDVVTFWTVVERKRKGFSVYQLPADGKDIVTTLQINDMFLLGLSEDDVDWQEPNYDLLKSHLYRVQKLSSKFYEFRLNTEASIQNNFQPYYVRIQSFGDGKTGWLTFNPIKVKVSVTGKLEKV
>NZ_CP019388.1|WP_076615840.1|557354_558104_-|hypothetical-protein
MAKQKGIVFFEGTLGGINFYYRKGVPTARRAGGGFTAKAIKHSPNMVRVRESNSEFALCSKINKYFKLALKPFLAGYKDGTLHARLMRLFLSIKDLDVTSERGQRTVGIGYATEYGPRVLSDFVVTPERPQLFSCSYTFDWAALRFNVWDFSVAAANFPKGADVMELVVGVLRFDFETCTYTSVMADALYVPRDFDASSFSISVDGLPDGDGVLVAVARVAFYQQVNGGLFLLSGAAGFGVAMFGCCDV
>NZ_CP019388.1|WP_076621234.1|558312_558666_-|4Fe-4S-dicluster-domain-containing-protein
MAIIITDECINCGACEPECPNTAIYEGADDWRYSDGTSLKGKIVLPNGKTVDADETQMPISDEVYYIAPDKCTECMGFHEEPQCAAVCPVDCCVPDDNHVETEEELLGKQRFMHPED
>NZ_CP019388.1|WP_076621235.1|558740_559799_+|acyl-CoA-reductase
MHLQQRINAFSKLGQFLRQFHTSGIQRNDTVEANDLFFEGFKHQIKLANEHNGWFTKANVYFSIASWADALTTKNINQWTRAYNFENIEPKTVGIIMAGNIPLVGFHDFLSVLISGHNVLVKQSSNDKHLLPYLAKYLEVVEPGFKGKITFTQDKLESFDAVIATGSDNTARYFEYYFKNKPSIIRKNRNSVAILNGNESKEDLEALSDDIFRYYGLGCRNVSKLFVPKDYNFDAFFNAVYKWHPVIHGAKYANNYDYNKTVYLMSEFDMLENGFLMIKEDKSYASPIATVFYEYYESKENLKHKLEEEHDKIQCIVANGFIKNEIAFGHTQKPELWDYADAVDTVEFLLKI
>NZ_CP019388.1|WP_076615845.1|559913_560975_+|3-phosphoserine/phosphohydroxythreonine-transaminase
MKKHNFSAGPCVLPKSVIQKASEALLNFDDGLSLIEISHRSKPFVDVMENARALALELLGLEGKGYKALFLQGGASTQFLMVALNLLEKRAGYLNTGTWSDKAIKEAKIYDDIYEVGSSKSANFNYIPKGYDIPEDYDYFHCTSNNTIFGTQMKSFPNAPIPMVCDMSSDIFSRQLDFTQFDLIYAGAQKNMGPAGTTLVVVKEDILGKVSRKIPSMMDYKVHISKGSMFNTPPVFAVYVSMLTLQWLKDLGGIKAIEEENEKKARLIYSEIDLNPLFKGYAVKEDRSTMNATFTLENENLKETFDAMWKEAGINGLNGHRSVGGYRASMYNALSLDSVKALVEVMSELERKA
>NZ_CP019388.1|WP_076615850.1|560996_561947_+|3-phosphoglycerate-dehydrogenase
MKVLANDGVSQSGIDALEAAGYEVLTTTVAQEQLQNYINDNDISVLLVRSATKVRKDIIDNCPSLKIIGRGGVGMDNIDVDYAREKGLHVINTPAASSHSVAELVFGHFYGLARFLHNSNRDMPLEGDSNFKALKKAYAKGVELKGKTLGVIGFGRIGQATAKIGIGAGMNIVAFDPFIEETTIDLDFFDGQKVSFNIKTVSKEEVLKQADFITLHVPAQKDYVIDEADFNQMKDGVIIANAARGGVVNEIALIKAIESGKVARAALDVFEKEPQPEVQLLMNPALSLTPHTGAATSEAQDRIGVELADQIIKILG
>NZ_CP019388.1|WP_076615854.1|562048_562684_+|DUF937-domain-containing-protein
MEGILDLLNSDMGKTIISGVSGSTGTDQNKTSNVLTMALPVLMKAMERNASTPEGAQGLMGALSNKHDGSILDNLGSLFGGGVNEEVKTDGSKILGHVLGSKQQGVEQVIGQKSGLDAGSVSDILKVAAPILMGVLGKQSRQNNVSSQSDLTGLLGGFLGGNDTRNEQSFLEKILDADGDGSVIDDVAGMVLGGAKKKGGLGGLLGGLFGK
>NZ_CP019388.1|WP_076621236.1|562873_563311_+|hypothetical-protein
MKKTIPFVILIALIASCKSYNSNPTINNGNSSALVKNDTVSISSDETDYEIIIIEPGFNAWLISTARPRGFHSQRWLEDRNAFLVQAWNQRNLQPHSYDPNLYQVRIDYDTRTDYGYEVNYKLYNYFLYFQLKYKQQLTSIIPRI
>NZ_CP019388.1|WP_076615857.1|563339_563834_+|hypothetical-protein
MNRFKEHWEIQHNWQLIFPLLGILGLGYSSFKLALVLFGDFRNMVIIIASVLLFVVLLIATLRLFKFLEKRWKLEYRWEIIRVFIVFAITGSSSLYVGRPIIKLLGITKENLNPALYWILFTIIGLIFYQILLVSFGWLFGQHKFFWEFEKKMLKRFGLKRFVD

Crispr_ID: NZ_CP019388_4

• CRISPR_ID: NZ_CP019388_4
• CRISPR_location: 1056476-1056601
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP019388_4

Consensus_repeat	Method
CTTGGCCTGTTGGTCCAAAATTCAATGGAATTGGTGGTTGCTC	CRISPRCasFinder

spacers of NZ_CP019388_4

>4.1|1056519|40|NZ_CP019388|CRISPRCasFinder
TCATAAAAAAATTTCGAGCAACTCAAATTCTAAATTTAGG

CRISPR arrays and Neighbor proteins around NZ_CP019388_4

CRISPR arrays

The CRISPR arrays of NZ_CP019388_4

>merge|NZ_CP019388|4|1056476-1056601|CRISPRCasFinder
CTTGGCCTGTTGGTCCAAAATTCAATGGAATTGGTGGTTGCTCTCATAAAAAAATTTCGAGCAACTCAAATTCTAAATTTAGGCTTGGCCTGTTGGTCCAAAATTTAATGGAATTGGTGGTTGCTC

>NZ_CP019388|4|4|1056476-1056601|CRISPRCasFinder
CTTGGCCTGTTGGTCCAAAATTCAATGGAATTGGTGGTTGCTC	TCATAAAAAAATTTCGAGCAACTCAAATTCTAAATTTAGG
CTTGGCCTGTTGGTCCAAAATTTAATGGAATTGGTGGTTGCTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019388.1|WP_076617145.1|1070407_1070716_-|HPF/RaiA-family-ribosome-associated-protein	unknown	unknown	gnl|CDD|238308
NZ_CP019388.1|WP_076617101.1|1034272_1034800_-|isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl|CDD|239218
NZ_CP019388.1|WP_076617106.1|1036893_1037820_-|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl|CDD|371704
NZ_CP019388.1|WP_076617129.1|1065782_1066304_-|50S-ribosomal-protein-L10	unknown	unknown	gnl|CDD|234632
NZ_CP019388.1|WP_076617139.1|1068097_1068292_-|preprotein-translocase-subunit-SecE	unknown	unknown	gnl|CDD|376355
NZ_CP019388.1|WP_076617136.1|1067533_1068079_-|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl|CDD|180161
NZ_CP019388.1|WP_076617113.1|1054273_1055863_+|peptide-chain-release-factor-3	unknown	unknown	gnl|CDD|179105
NZ_CP019388.1|WP_076617090.1|1031319_1032030_+|DUF4369-domain-containing-protein	unknown	unknown	gnl|CDD|379543
NZ_CP019388.1|WP_076617127.1|1065345_1065726_-|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl|CDD|234671
NZ_CP019388.1|WP_076617124.1|1061411_1065224_-|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl|CDD|234749
NZ_CP019388.1|WP_076617092.1|1032561_1032831_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP019388.1|WP_076617110.1|1037849_1053806_-|DUF11-domain-containing-protein	unknown	unknown	gnl|CDD|372639
NZ_CP019388.1|WP_076617098.1|1033865_1034276_-|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl|CDD|376501
NZ_CP019388.1|WP_076617132.1|1066323_1067013_-|50S-ribosomal-protein-L1	unknown	unknown	gnl|CDD|180071
NZ_CP019388.1|WP_076617134.1|1067023_1067464_-|50S-ribosomal-protein-L11	unknown	unknown	gnl|CDD|234661
NZ_CP019388.1|WP_076617121.1|1057012_1061314_-|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl|CDD|234794
NZ_CP019388.1|WP_076617142.1|1068473_1069661_-|elongation-factor-Tu	unknown	unknown	gnl|CDD|183708
NZ_CP019388.1|WP_076617095.1|1032890_1033862_-|mannose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|380413
NZ_CP019388.1|WP_076617116.1|1056000_1056231_+|(4Fe-4S)-binding-protein	unknown	unknown	gnl|CDD|284351
NZ_CP019388.1|WP_076617104.1|1034903_1036883_-|OmpA-family-protein	unknown	unknown	gnl|CDD|143586

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP019388.1|WP_076617145.1|1070407_1070716_-|HPF/RaiA-family-ribosome-associated-protein	gnl|CDD|238308	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site. RaiA is also thought to counteract miscoding at the A site thus reducing translation errors. The RaiA fold structurally resembles the double-stranded RNA-binding domain (dsRBD).	2.79252e-12
NZ_CP019388.1|WP_076617101.1|1034272_1034800_-|isopentenyl-diphosphate-Delta-isomerase	gnl|CDD|239218	cd02885, IPP_Isomerase, Isopentenyl diphosphate (IPP) isomerase, a member of the Nudix hydrolase superfamily, is a key enzyme in the isoprenoid biosynthetic pathway. Isoprenoids comprise a large family of natural products including sterols, carotenoids, dolichols and prenylated proteins. These compounds are synthesized from two precursors: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). IPP isomerase catalyzes the interconversion of IPP and DMAPP by a stereoselective antarafacial transposition of hydrogen. The enzyme requires one Mn2+ or Mg2+ ion in its active site to fold into an active conformation and also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as a metal binding and catalytic site. The metal binding site is present within the active site and plays structural and catalytical roles. IPP isomerase is well represented in several bacteria, archaebacteria and eukaryotes, including fungi, mammals and plants. Despite sequence variations (mainly at the N-terminus), the core structure is highly conserved.	1.10973e-89
NZ_CP019388.1|WP_076617106.1|1036893_1037820_-|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl|CDD|371704	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF. This entry describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Cytophaga johnsonae (Flavobacterium johnsoniae), that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss of the rapid gliding phenotype.	1.4723e-109
NZ_CP019388.1|WP_076617129.1|1065782_1066304_-|50S-ribosomal-protein-L10	gnl|CDD|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	8.93919e-47
NZ_CP019388.1|WP_076617139.1|1068097_1068292_-|preprotein-translocase-subunit-SecE	gnl|CDD|376355	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex. SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex.	3.2624e-10
NZ_CP019388.1|WP_076617136.1|1067533_1068079_-|transcription-termination/antitermination-factor-NusG	gnl|CDD|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	3.2472e-63
NZ_CP019388.1|WP_076617113.1|1054273_1055863_+|peptide-chain-release-factor-3	gnl|CDD|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP019388.1|WP_076617090.1|1031319_1032030_+|DUF4369-domain-containing-protein	gnl|CDD|379543	pfam14289, DUF4369, Domain of unknown function (DUF4369). This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with pfam00578.	5.33647e-12
NZ_CP019388.1|WP_076617127.1|1065345_1065726_-|50S-ribosomal-protein-L7/L12	gnl|CDD|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	4.55716e-41
NZ_CP019388.1|WP_076617124.1|1061411_1065224_-|DNA-directed-RNA-polymerase-subunit-beta	gnl|CDD|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NZ_CP019388.1|WP_076617110.1|1037849_1053806_-|DUF11-domain-containing-protein	gnl|CDD|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	7.6208e-35
NZ_CP019388.1|WP_076617098.1|1033865_1034276_-|6-carboxytetrahydropterin-synthase	gnl|CDD|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	3.27268e-38
NZ_CP019388.1|WP_076617132.1|1066323_1067013_-|50S-ribosomal-protein-L1	gnl|CDD|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.23497e-137
NZ_CP019388.1|WP_076617134.1|1067023_1067464_-|50S-ribosomal-protein-L11	gnl|CDD|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	8.99036e-86
NZ_CP019388.1|WP_076617121.1|1057012_1061314_-|DNA-directed-RNA-polymerase-subunit-beta'	gnl|CDD|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NZ_CP019388.1|WP_076617142.1|1068473_1069661_-|elongation-factor-Tu	gnl|CDD|183708	PRK12735, PRK12735, elongation factor Tu; Reviewed.	0
NZ_CP019388.1|WP_076617095.1|1032890_1033862_-|mannose-6-phosphate-isomerase	gnl|CDD|380413	cd07010, cupin_PMI_type_I_N_bac, Phosphomannose isomerase in bacteria and archaea, N-terminal cupin domain. This subfamily contains type I phosphomannose isomerase (PMI; E.C. 5.3.1.8; also known as mannose-6-phosphate isomerase) found in many bacteria (e.g. Bacillus subtilis) and archaea. PMI catalyzes the reversible isomerization of fructose-6-phosphate (F6P) and mannose-6-phosphate (M6P), the first committed step in the synthesis of mannosylated glycoproteins. The active site, located within the N-terminal jelly roll-like beta-barrel cupin fold, contains a single essential zinc atom and forms a deep, open cavity large enough to contain M6P or F6P. PMI type I also has a C-terminal beta-barrel fold which has diverged considerably from the N-terminal domain and is not included here. This subfamily does not contain an alpha helical domain that exists in eukaryotic and some prokaryotic PMIs. F6P is a substrate for glycolysis and gluconeogenesis, while M6P is a substrate for production of activated mannose donor guanosine 5'-diphosphate D-mannose, an important precursor of mannosylated biomolecules such as glycoproteins, bacterial exopolysaccharides and fungal cell wall components. PMI is also essential for survival, virulence and possibly pathogenicity of some bacteria and protozoan parasites, as well as for cell wall integrity of certain yeasts. Thus, PMI is a potential target against fungal infections causing serious illness or death.	9.83887e-78
NZ_CP019388.1|WP_076617116.1|1056000_1056231_+|(4Fe-4S)-binding-protein	gnl|CDD|284351	pfam06902, Fer4_19, Divergent 4Fe-4S mono-cluster. Members of this family contain three highly conserved cysteine residues. This family includes proteins containing divergent domains which are most likely to bind to iron-sulfur clusters.	3.69449e-16
NZ_CP019388.1|WP_076617104.1|1034903_1036883_-|OmpA-family-protein	gnl|CDD|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	2.59037e-35

Protein sequences

>NZ_CP019388.1|WP_076617116.1|1056000_1056231_+|(4Fe-4S)-binding-protein
MDAKANVYSNKDITVTYEPRCCVNAGICAKQLSEVFRNSVIPWIDLDGAHTDVIVDQIKKCPSGALKYHLNQKDVA
>NZ_CP019388.1|WP_076617113.1|1054273_1055863_+|peptide-chain-release-factor-3
MSFKEEINRRRTFGIISHPDAGKTTLTEKLLLFGGAIQEAGAVKSNKIKKGATSDFMEIERQRGISVATSVLAFEYNGIKINILDTPGHKDFAEDTFRTLTAVDSVIVVIDVAKGVEEQTEKLVEVCRMRNIPMIVFINKLDREGKDAFDLLDEVEQKLGLKVTPLSFPIGMGYEFKGIYNIWEKNVNLFKGDSKQHINDTVEISDLNSKELDKLVGEKAAQTLRDEIELVEGIYPDFDKEAYLNGHLQPVFFGSALNNFGVRELLDCFVEIAPKPRAKKSEERLVQPEEKEFSGFVFKIHANMDPNHRNRLAFVKIVSGEFKRNTPYLHVRHDKKLKFSSPNAFFAEKKEIVDISYPGDIVGLQDSGNFKIGDTLTEGEVLNYKGIPSFSPEHFRYINNADPMKAKQLYKGIDQLMDEGVAQLFTLDYNGRKVIGTVGALQYEVIQYRLEHEYGAKCTYENLNVHKACWVQTDNDKSDEFKDFLRVKQRYLARDKQNQLVFLADSMFTLQMTQQKYPSITFHMTSEFE
>NZ_CP019388.1|WP_076617110.1|1037849_1053806_-|DUF11-domain-containing-protein
MKISTRFSNLSLAYICLGFVFFHSITIKAQGCPTINEDGIFNPETDVLMTSYHQSMAKTTTGIVAWGEDMAANGGNANVITEVTPANGYNYSGTPLHFALSGNSDGQGFLATTVSLYAWGGVGEVVDGDFVSGIGFNDMDATQTLPFNSADITQMHASSDVLFVIAAGEVWVATTGTTAPSGNNSTNGNIWQQVQTSAGVPLTGVINITGNKYAGYALLSNGDIYTWGDNVVIGDGSPAQNLDFATLMATPPAPVKEISSFTHNDGDTGLLLLATDTKVYGVGDNTLGELITTGSGVVTSWTAIQDNSGMSDLIGVIQLSTTHTSEEWAAAAVLVEPALPSDPYIIYSWGWNNQNSIGQGGNAVIQNPTIPPSFNVGVDDPVYVSVGGHAMTFFNRAGGGSICFVGHITSGSTGGLTTGSGNVFECVIPATVELCGSQPTILALDDDFSGSPFDAITGGTTASVFADNGNGIDESDGSPATDANINDNINISNNGGLTGVSINTDGTIDVPAGATAGTYTVTYEICLNAPNETICTTANVIIELVANCDITAISSSNESVCNDNLTPDNISDDTFTADITVTFTNAPGVGTLDLSGDGTASVSVVGLTSPHTFTGVTLPANGSAISLTATFSNDGACTLTNNSVVNAPFECSDDECPDVIPPGSPAAPLVAGNVSFNITNPAGNSSPKIFNSISIAGEPNPFTDLLVPDNISYSYSTPTATNQSIIENGVDGADITDGSAIFDPALIAANTDRNLNHYFRNDGNIFATDYVNFEFNYDINAASNRYVIITERGGNNTMEVQAIDATGNVIGTPQPINQVSGADGPTTYIGTGVNNNNGQQVFATIYPLTAFVGPNVPINGVRLTQSGASGGDGGDGKVFIVYDPFFLTPPPTISLSTSFTQPVCPANEGTITIDATDNGGGPLEYSINGAAGPWQASNVFNNVGPGTYNAAVRYIGSPSCQNISSDAFTLLDGGCLTITANDDDFSATPINSLIPGSTTASVFADNSSGTDLANGVAATNGNISNNISISNDGGMTGVVINNNGTIVIPPNTPNGTYFVEYTICLQADNTVCDTAVATIVVANIDPCDALASGGLDTDGDGITDYCDQDDDNDGILDVNDIDCSSGPLALGQTFSDNTGSNFNAEFITNVYAYNGVSATFGYELFGGSAWNGGVSNQNTAGILPDGEYINTIADGTTFPENEVVRYYFTFTEPVYNVNFKLGGLDDFDRADFFATNGSDNVPVNLSDINIGANLTINGQSAVTGASASANAPANSIAIQVVGPVTEIVITVGKQNGDETANVELQFYEMQYCVAIDTDGDGINDIVDLDSDNDGIFDVDEVGGIDVNNDGMADGAVDPVTGIPSTAGTGITPIDTLNDGSFDYQNTDSDGDGCADANEAYGNVNAAGTDNGQFGEPDPANVDANGLVIDGDVNYSIGTNTAVVNPLLSPACNPCDATISGNDDNDGDNVSDICDVDDDNDGILDINELDCSAGPIALGQTFADATGSNFNPEFIPNLFPYNGASVTFGYELRGGVAWNGGVSSQNNGAILPDGAFINTIPDGTDFPNGEVVNYYFTFTEPVYNVNFKVGGLDDSDRADFTATNGLQNIPVNISDINVGANLTINGQSAVTGSSANANAPFNSIQIEILGPVTDIVVTVGKQNGNAGNVELQFYEFEYCLGLDTDGDGVDDIFDLDSDNDGIYDVDEAGNGTLDTNDDGVLDSNDTTFNDGNGNGADDTAEATTPIDTGSDGSFDFQNTDSDGDSCPDANEAYDNPFVSGSDGGQFGEPDPALVDPNTGLVTETGVDYSTGTNAAVTDPSVATSCVINPSITTVKTFLNINGDPLITEYSALNQVINYTITLTNSGNVDVYNPTMVDTTADTAPVRGADAPGNDDAVLEVDEVWTYTVSHTVTQIDLDNGSYTNTAEADGSADTTNDASGDTPVDSDDIETVNGIEMPAIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETTIAEAPSIEAVKTVAITNDVAPAGASLGDTVEYTITVTNTGNVTLDGVGIVDTFEDANGNPLTLLTGPTFVSADAGSLEGDLLVGETATYTATYVIEQAAVDAGGFSNSVLADGDSPADTNVDDTSDDGDDTDGNTEDDPTETIIIQAPSLAIEKTSSLDLGADGIATVGDIITYTYTVTNTGNTTVFDVNVTEDAADFTGTGTLPTPVYQSGGSDEDGESDLEDMIVGSGTIVYTATYAITQADIDAGIVTNQAIANGTDPLGGGVTDDSDDPTDPTSTDDPTDTTIPQDPSLAIEKTSSLDLGADGIATVGDIITYTYTVTNTGNTTVFDVNVTEDAADFTGTGTLPTPVYQSGGSDEDGESDLEDMVVGSGTIVYTATYAITQADIDAGIVTNQASTNGTDPLGGGVTDDSDDPADPTSTDDPTDTTIPQDPSLAIEKTSSLDLGADGIATVGDIITYTYTVTNTGNTTVFDVSVTEDAADFTGTGILPIPVYQSGGSDEDGDSQIDDLAVSPQNPIVFTATYALTQADIDAGIVTNQALANGSDPLGGGVADDSDDPTDPTGTDDPTDTEIIQVPMISLIKTTLPLADTNGDGIEGSLGDEISYVFIVENTGNVTLTNIEVEDLLPGINLVGGPIAQLLPGDVDSTTFTATYEITQVDLDTGFVINSANVTAESPGGDLGDPTDDVRDTSDDPNDANDNDDNGDGEPDDPTVTPVNSIFDLEVTKVVDEVRPVVGDEVTFTIEVANIGNVTATNVIISEEIPTGYMFVSAITTAGTYSEFDGEWTVGQLDPDQVEILEITVEVLGIGDYANTAFVNNADGGNDINPSNDEDTATVDPICLTIYNEFSPNGDGVNETFVIDCIERFSNNKLEVYNRWGNIVYSKNGYLNDWDGTSNGRAVINQSDQLPVGTYYYVLDLGDGSEPRVGWLYINR
>NZ_CP019388.1|WP_076617106.1|1036893_1037820_-|type-IX-secretion-system-membrane-protein-PorP/SprF
MIRILSKASLILMVFTALLATDLNAQQDPQYTHYMYNTLSVNPAYAGQRETLSVVGLHRSQWVGIDGAPQTQSLGIHSPLRNERIGLGLNIVSDALGPARENFIDANFSYTIPLNANDLKLSFGVKGGLHMLDLDWSKGRFQDPDNVFNENVNLISPTVGAGLYMHTRKWYLGLAVPNFLETEHYDDFQESRATERMHFYAIGGYVFNLSETLELKPAFLVKGVSGAPLIADVSANFWYKKNLTAGLAWRWDDSVSALVGFQATPGMFIGYGYDLTTTGLNNYNGGTHEITLRFEVKRLGRILSPRFF
>NZ_CP019388.1|WP_076617104.1|1034903_1036883_-|OmpA-family-protein
MRTISRYISLVCAGIFAVSAYTQNGKIKSVEDDYRDFAYVKTSEVLLEVANKGYKSADLFQKLANSYYFRNDMANAAKWYGELFTMNEVIDPEYYFRYALALKGIENYEESDKWMKKFNELKPDDMRGRAFLSRVDYRTNIQEQSRDDIEVQNLEINTELSDFGTTEYENGIVFASARGGGRKYRWNEEPYLDLYVAEKTENGFGEVKEVEGKVNTKYHESSAVFSPNGKYMFFTRNNFYRLKYKEDGTGINRLQLYRATLSEDGTWDEIHKVHFNSEDYSVAHPTLNLTGTRLYFASDMPGTYGQSDIFVVDVNDDGTLGKPENLGPSVNTEGQESFPFMDTSGNLFFSSTGFPGLGGLDVYKSEELDQKVAAGSNRNFPIENIGMPVNSSADDFGYYQNLVTKRVYFSSNREGGKGSDDIYTFEVPECEQLVFGTVQDKKTDELIPNATVILFDGEGKEIERKTVGEDAVFEFELDCEMEYLIRGEKDTYISDEKRFTTPKKKQELQLQLLLEKDVQEINPCDDLAKILDIPIIYFDFDKSNIRYDAEIELQKVLAVLNKYPTMHIDIRSHTDCRGLADYNERLSDRRAKSTRQYLIDNGIAAERLTAKGYGESQLVNDCGCEPTNESSCSEEEHQLNRRSEFIITSINGKSCDDKE
>NZ_CP019388.1|WP_076617101.1|1034272_1034800_-|isopentenyl-diphosphate-Delta-isomerase
MIEEQVILVDENDNKIGLMPKMEAHEKALLHRAFSVFVFNDKNELMLQQRALHKYHSPGLWTNTCCSHQRNGESNLDAGKRRLQEEMGFVTELKETTSFIYKAPFDNGLTEHEYDHIMVGKYNDKPNINPKEVADWKWMPLEDVKADVSLHPEHYTAWFKIIFEKFYKHINVNKS
>NZ_CP019388.1|WP_076617098.1|1033865_1034276_-|6-carboxytetrahydropterin-synthase
MKVTVHRKAHFNAAHRLYRKDWSFEKNDEVFGLCNNPNFHGHNYELIASVTGEIDPETGYVIDVKILKDIIKSEVENAFDHKNLNIEVPEFQDLNPTAENIAVVIYNKIKAKLDDKFHLEITLYETPRNFVTYSGQ
>NZ_CP019388.1|WP_076617095.1|1032890_1033862_-|mannose-6-phosphate-isomerase
MKQQLYPLKFRPILKDKIWGGTKLATQFNKASSSKELGESWEISTVPGDISKVVNGDLNSQNLQDILELYKGELIGEKNYDRFGHDFPLLIKFIDAKQDLSIQLHPDDELAKARHNSFGKTEMWYVMQADKDANLIVGFNQKIDRETYLKHLNNKSLTSILNFDKVKEGDTYFIEAGRVHAIGAGVLLAEIQQTSDVTYRVYDWDRKDAQGNERELHNDIAIDAFKFDLKDDFKVKYKKEKNTANNMVSCPFFTTNYLELDSELVKENTHDSFLIYMCVDGEVEVVADNTREVISKGETILIPAVIKDFKLSTNSAKLLEVYV
>NZ_CP019388.1|WP_076617092.1|1032561_1032831_-|hypothetical-protein
MANKRDLKKDINYVFGDIIEAVYYWELENTEKPTKESNAIIDEAIASFDELIARVNDRSVDDAKSHFKAINNDLESKGRALIERINKLK
>NZ_CP019388.1|WP_076617090.1|1031319_1032030_+|DUF4369-domain-containing-protein
MTNFYKTLSLLALLLMVWSCGEDNDTNFTLKGSIKDLKKGVVYLQKEVDSTIVHLDSMVISGQPEFTLKTNLEEPMLLYLKLFKNDGEEHYIPFFADEGVTEIKTTLKNFNFDAEIKGSKPQDLLNEYTKVMSKFNNQNLDIIEANFLAQKNNDSIAADSLNKASEVLYKRKYSYTIQFALNNRDNIIAPYLALYEVPSANPIYVDSIYNGLTENVKNSFYGKKLGDFIAERNSEQ
>NZ_CP019388.1|WP_076617121.1|1057012_1061314_-|DNA-directed-RNA-polymerase-subunit-beta'
MARKQDKNTVQKFNKISIGLASPESVLAASRGEVLKPETINYRTHKPERDGLFCERIFGPVKDFECACGKYKRIRYKGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKIGYLLGLPSKKLDMIIYYERYVVIQPGNAMNAEGEPVQKMDFLTEEEYLNILESLPQENQYLEDTDPNKFIAKMGAECLIDLLARIDLDQLSYDLRHKANNETSKQRKTEALKRLQVVEAFRESNENRENRPEWMIMKAIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLVEIKAPEVILRNEKRMLQESVDSLFDNTRKSSAVKTDSNRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPELKLFECGLPKNMAAELYKPFIIRKLIERGIVKTVKSAKKIIDRKEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHLPLGPEAILEAQLLMLASHNILNPANGSPVTVPSQDMVLGLYYMTKLRKTDKEYTVKGEGLTFYSPEEVTIAYNEKKVDLNAGIKVRTKDFNEEGELTTQIIETTVGRVLFNEKVPEAAGYVNEVLTKKSLRDIIGKILKVTSVPETAEFLDEIKTLGYKFAFQGGLSFSLGDIIIPEEKHSMIDAANKQVDGIMGNYNMGLITNNERYNQVIDIWTSTNAELTELSMKRIREDQQGFNSVFMMLDSGARGSKEQIRQLTGMRGLMAKPKKSNAGGGEIIENPILSNFKEGLSILEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVYEEDCGTLRGIEVSALKKNEEVVEKLEARIVGRTSLNDVYDPLTEELIIEAGGHIDDNIAKKIGDSAIETIEVRSPLTCEAKQGICVKCYGRNLATGKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEENKLTVKFDGIAEIDDLKTVKTKDGEGKEVDVVISRTSELKLTDAKTGIVLSTNNIPYGSHIFVKPGAKVKKGDVICQWDPYNGVIISEFAGKVKYENIEQGVTYQVEIDEQTGFQEKVISESRNKKLIPTLLIEDKKGETIRSYNLPVGAHIMIDDGDKIEVGKILVKIPRKSAKAGDITGGLPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKLGEVKKYLVKLSNQILVQENDYVKAGMPLSDGSVTPNDILNIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVRQMMRKVRIIDSGDTIFLENQLVHKSDFIEENDKIFGMKVVEDAGDSENLKSGQIVTVRQLRDENSILRREDKNLVTARDAQPATATPILQGITRASLQTKSFISAASFQETTKVLNEAAVNGKVDTLEGLKENVIVGHRIPAGTGVREYDNIIVGSKEEFDQMMKAKEEMNFN
>NZ_CP019388.1|WP_076617124.1|1061411_1065224_-|DNA-directed-RNA-polymerase-subunit-beta
MLAKKAERINFSSIVNRTDYPDFLDIQIKSFQDFFQLETKSEARENEGLYNTFMENFPITDTRNQFVLEFLDYFIDPPRYTIEECIERGLTYSVPLKARLKLYCTDPEHEDFETIVQDVYLGTIPYMTPSGTFCINGAERVVVSQLHRSPGVFFSQSFHANGTKLYSARVIPFKGSWIEFATDINSVMYAYIDRKKKLPVTTLFRAIGFERDKDILEIFDLAEEVKVSKSGLKKVIGRKLAARVLNTWHEDFVDEDTGEVVSIERNEIVLDRDTIVDKDNIEEILEAGVKTILLHKESAQQGDYAIIHNTLQKDPTNSEKEAVEHIYRQLRNAEPPDEETARGIIDKLFFSDQRYSLGEVGRYRMNKKLGLDIGMDKQVLTKEDIITIIKYLIELINSKAEIDDIDHLSNRRVRTVGEQLSSQFGVGLARMARTIRERMNVRDNEVFTPIDLINAKTLSSVINSFFGTNQLSQFMDQTNPLAEITHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLSVYAKVNAMGFIETPYRKVENGVVDIKNAPTYLSAEEEEEMMIAQATVEVDGKGKIQHDKVIARQEGDFPVIEPSNVNYTDVAPNQIASISASLIPFLEHDDANRALMGSNMMRQAVPLLRPEAPIVGTGLERQVASDSRVLINAEGEGIVEYVDAEKIVIKYERTEEEAMVSFDSDVKEYPLVKFRKTNQGTSINLKPIVRKGDKVSKGQVLCEGYATQNGELALGRNMKVAFMPWKGYNFEDAIVISEKVVRDDIFTSIHIDEYSLEVRDTKLGNEELTNDIPNVSEEATKDLDENGMIRVGAEIKPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKASPSLNGVVIDKKLFARAVKDKRKRAQDKEDIEKLEDAYDKHFDDLKAVLVEKLFAIVNGKTAQGIYNDLGEEIIPKGKKYTLKMLNAVDDYTHLTSGKWTTDDHTNELVADLIHNYKIKENDLQGSLRREKFTISVGDELPAGIIKLAKVYIAKKRKLKVGDKMAGRHGNKGIVARIVRQEDMPFLEDGTPVDIVLNPLGVPSRMNIGQIYETVLGWAGQKLNRTYATPIFDGATLDQINGFTDEAGVPRFGHTYLYDGGTGDRFDQPATVGVIYMIKLGHMIDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGASSTLREILTVKSDDVIGRAKTYEAIVKGEPMPEPGLPESFNVLMHELKGLGLDIRLEE
>NZ_CP019388.1|WP_076617127.1|1065345_1065726_-|50S-ribosomal-protein-L7/L12
MADLKDFAEQLVNLTVKEVNELATILKDEYGIEPAAAAVAVAAGGGAAGGGEAAEEKSEFDVVLKSAGASKLAVVKLVKELTGLGLKDAKGLVDEAPSTIKEGVSKDEAEGLKSSLEEAGAEVELK
>NZ_CP019388.1|WP_076617129.1|1065782_1066304_-|50S-ribosomal-protein-L10
MTREEKSVVIEELTAQLADNTNIYLADISGLDAATTSNLRRACFKSNIKLAVVKNTLLEKAMEASEKDFGDLPSTLKGNTSVMYSETGNAPAKVIKEFRKKSEKPLLKGAFIEEAIYIGDDLLDTLVEIKSREELLGEIVTLLQSPAKNVISALKSGGGTIAGLVKTLSEREG
>NZ_CP019388.1|WP_076617132.1|1066323_1067013_-|50S-ribosomal-protein-L1
MARLTRKQKEARAKVDKNKLYSLEEASALLKEITYTKFDASVDLAVRLGVDPRKANQMVRGVVSLPHGTGKDMKVLALVTPDKEAEAKEAGADYVGLDEYLQKIKDGWTDVDVIVTMPSVMGKLGPLGRVLGPRGLMPNPKTGTVTMDIGKAVSEVKAGKIDFKVDKTGIVHAPIGKASFSAEKLVGNANELLTTLMKLKPTAAKGTYMKSIYMSSTMSPSIAIDTKIG
>NZ_CP019388.1|WP_076617134.1|1067023_1067464_-|50S-ribosomal-protein-L11
MAKELDKVVKLQVRGGAANPSPPVGPALGAAGVNIMEFCKQFNARTQDKPGKVLPVVISVYKDKSFEFVIKTPPAAVQLLEAAKVKKGSGEPNRRKVAKVTWDQVKAIAEDKMQDLNAFEIGSAMKMVAGTARSMGITVKGGEAPN
>NZ_CP019388.1|WP_076617136.1|1067533_1068079_-|transcription-termination/antitermination-factor-NusG
MSDKKWYVVRAVSGQENKIKTYIENEIARLGLEDYVDQVLVPTEKVIQIRNGKKINKEKVYFPGYIMIQANLSGEIPHIIKSITNVIGFLGETKGGDPVPLRQSEVNRMLGKVDELAIEADANIAIPFTKGETVKVIDGPFNGFDGTIEKIFEEKRKLEVMVKIFGRKTPLELSYMQVEKL
>NZ_CP019388.1|WP_076617139.1|1068097_1068292_-|preprotein-translocase-subunit-SecE
MAGLITYIKESFDELKNNVSWTPWPEAQRLTVIVAVFSIIFSLAIWGVDTVFSRAVKAYFDLLN
>NZ_CP019388.1|WP_076617142.1|1068473_1069661_-|elongation-factor-Tu
MAKATFDRSKPHLNIGTIGHVDHGKTTLTAAITKVLADAGLSEARAFDQIDNAPEEKERGITINTSHVEYQTANRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMPQTREHILLGRQVGIPRIVVFMNKVDMVDDEELLELVEMEIRDLLSFYEYDGDNGPVIAGSALGALNGEQKWVDTVMELMEACDSWIEEPVRDMDKPFLMPIEDVFSITGRGTVATGRIETGVANTGDPVEIIGMGAEKLTSTITGIEMFRQILDRGEAGDNAGILLRGIEKTQISRGMVIVKPGSVTPHQKFKAEVYILKKEEGGRHTPFHNNYRPQFYVRTTDVTGNISLPDGVEMVMPGDNLTITVELIQPIAMNVGLRFAIREGGRTVGAGQVTEILD
>NZ_CP019388.1|WP_076617145.1|1070407_1070716_-|HPF/RaiA-family-ribosome-associated-protein
MKVNTQSVNFTADRKLIDFIQKRMDKLDLFYDKIIQSDVYLKVENTSDKENKVFEAKVRVPGDSFIVKKQCKTFEEGADIAIASLERQIKKRKQKLRARTKA

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP019388_2	2.1|146299|60|NZ_CP019388|CRISPRCasFinder	146299-146358	60	NZ_CP019388.1	130426-130485	0	1.0
NZ_CP019388_2	2.1|146299|60|NZ_CP019388|CRISPRCasFinder	146299-146358	60	NZ_CP019388.1	131363-131422	0	1.0

1. spacer 2.1|146299|60|NZ_CP019388|CRISPRCasFinder matches to position: 130426-130485, mismatch: 0, identity: 1.0

taagcttcgcttaggtatcttcaatcaaaatgtattttgatttcgatagtttcgcaaatc	CRISPR spacer
taagcttcgcttaggtatcttcaatcaaaatgtattttgatttcgatagtttcgcaaatc	Protospacer
************************************************************

2. spacer 2.1|146299|60|NZ_CP019388|CRISPRCasFinder matches to position: 131363-131422, mismatch: 0, identity: 1.0

taagcttcgcttaggtatcttcaatcaaaatgtattttgatttcgatagtttcgcaaatc	CRISPR spacer
taagcttcgcttaggtatcttcaatcaaaatgtattttgatttcgatagtttcgcaaatc	Protospacer
************************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019388_3	3.15|551766|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551766-551795	30	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	195009-195038	5	0.833
NZ_CP019388_3	3.15|551766|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551766-551795	30	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	198886-198915	5	0.833
NZ_CP019388_3	3.15|551766|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551766-551795	30	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	198876-198905	5	0.833
NZ_CP019388_3	3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	552161-552190	30	NC_048865	Salmonella phage oldekolle, complete genome	103857-103886	5	0.833
NZ_CP019388_3	3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	552161-552190	30	MT074460	Salmonella phage bux, complete genome	106207-106236	5	0.833
NZ_CP019388_3	3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	552161-552190	30	KY114934	Salmonella phage SP01, complete genome	103300-103329	5	0.833
NZ_CP019388_3	3.6|551171|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551171-551200	30	NZ_CP041396	Bacteroides ovatus strain 3725 D1 iv plasmid unnamed1, complete sequence	63488-63517	6	0.8
NZ_CP019388_3	3.8|551303|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551303-551332	30	MF001361	Enterococcus phage EF5, partial genome	102408-102437	6	0.8
NZ_CP019388_3	3.8|551303|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551303-551332	30	MF001358	Enterococcus phage EF1, partial genome	14909-14938	6	0.8
NZ_CP019388_3	3.11|551501|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551501-551530	30	NZ_CP053380	Serratia marcescens strain FY plasmid p2, complete sequence	85319-85348	6	0.8
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	NC_005004	Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-05, complete sequence	4974-5003	6	0.8
NZ_CP019388_3	3.17|551898|29|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551898-551926	29	NZ_CP007649	Lactobacillus salivarius strain JCM1046 plasmid pLMP1046, complete sequence	34249-34277	6	0.793
NZ_CP019388_3	3.7|551237|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551237-551266	30	NZ_CP048109	Klebsiella michiganensis strain BD177 plasmid unnamed1	99559-99588	7	0.767
NZ_CP019388_3	3.8|551303|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551303-551332	30	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	1123668-1123697	7	0.767
NZ_CP019388_3	3.9|551369|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551369-551398	30	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	337572-337601	7	0.767
NZ_CP019388_3	3.9|551369|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551369-551398	30	NZ_CP023246	Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence	348682-348711	7	0.767
NZ_CP019388_3	3.12|551567|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551567-551596	30	MH319764	Marine virus AG-345-P14 Ga0172274_11 genomic sequence	17401-17430	7	0.767
NZ_CP019388_3	3.12|551567|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551567-551596	30	MN694353	Marine virus AFVG_250M583, complete genome	18993-19022	7	0.767
NZ_CP019388_3	3.14|551700|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551700-551729	30	MG592612	Vibrio phage 1.247.A._10N.261.54.E12, partial genome	20862-20891	7	0.767
NZ_CP019388_3	3.14|551700|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551700-551729	30	MG592613	Vibrio phage 1.247.B._10N.261.54.E12, partial genome	20863-20892	7	0.767
NZ_CP019388_3	3.14|551700|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551700-551729	30	MH729874	Klebsiella phage KP179, complete genome	9093-9122	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	NC_014023	Bacillus megaterium QM B1551 plasmid pBM700, complete sequence	154349-154378	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	NC_014749	Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence	36436-36465	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	397977-398006	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	MK250023	Prevotella phage Lak-B4, complete genome	318758-318787	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	MK250029	Prevotella phage Lak-C1, complete genome	357942-357971	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	MK250016	Prevotella phage Lak-A1, complete genome	393128-393157	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	MK250019	Prevotella phage Lak-A2, complete genome	312267-312296	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	MK250027	Prevotella phage Lak-B8, complete genome	317450-317479	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	MK250026	Prevotella phage Lak-B7, complete genome	316508-316537	7	0.767
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	NZ_CP022431	Pantoea ananatis strain YJ76 plasmid p_unamed2	16977-17006	7	0.767
NZ_CP019388_3	3.22|552227|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	552227-552256	30	AP014250	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S40-C9, *** SEQUENCING IN PROGRESS ***	23869-23898	7	0.767
NZ_CP019388_3	3.22|552227|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	552227-552256	30	KT895374	Bacillus phage vB_BpuM-BpSp, complete genome	245658-245687	7	0.767
NZ_CP019388_3	3.4|551039|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551039-551068	30	NZ_CP017756	Cupriavidus malaysiensis strain USMAA1020 isolate pure plasmid unnamed1, complete sequence	74739-74768	8	0.733
NZ_CP019388_3	3.11|551501|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551501-551530	30	NZ_CP009573	Sphingomonas taxi strain ATCC 55669 plasmid STP2, complete sequence	25621-25650	8	0.733
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	MT188223	Acinetobacter phage vB_AbaM_D22, complete genome	71627-71656	8	0.733
NZ_CP019388_3	3.18|551963|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551963-551992	30	LT598654	Phage NCTB genome assembly, complete genome: monopartite	81685-81714	8	0.733
NZ_CP019388_3	3.18|551963|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551963-551992	30	AP013510	Uncultured Mediterranean phage uvMED DNA, complete genome, group G20, isolate: uvMED-CGR-C101A-MedDCM-OCT-S30-C6	22206-22235	8	0.733
NZ_CP019388_3	3.18|551963|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551963-551992	30	AP013876	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C101A-MedDCM-OCT-S39-C9, *** SEQUENCING IN PROGRESS ***	31378-31407	8	0.733
NZ_CP019388_3	3.19|552029|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	552029-552058	30	NZ_CP030249	Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_3, complete sequence	2261-2290	8	0.733
NZ_CP019388_3	3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	552161-552190	30	MN582059	Podoviridae sp. ct2cs2, complete genome	20396-20425	8	0.733
NZ_CP019388_3	3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	552161-552190	30	NC_019924	Clostridium phage phi8074-B1, complete genome	42059-42088	8	0.733
NZ_CP019388_3	3.24|552358|30|NZ_CP019388|CRISPRCasFinder,CRT	552358-552387	30	MN693539	Marine virus AFVG_25M73, complete genome	31796-31825	8	0.733
NZ_CP019388_3	3.7|551237|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551237-551266	30	NZ_CP032091	Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence	49054-49083	9	0.7
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	9726-9755	9	0.7
NZ_CP019388_3	3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR	551832-551861	30	NZ_CP026603	Clostridiaceae bacterium 14S0207 plasmid unnamed3, complete sequence	27478-27507	9	0.7

1. spacer 3.15|551766|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 5, identity: 0.833

aggtagaacgccgtcttgtctttct-gtata	CRISPR spacer
acgtagagcgccttcttgtctttctcgtac-	Protospacer
* *****.**** ************ ***. 

2. spacer 3.15|551766|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

aggtagaacgccgtcttgtctttct-gtata	CRISPR spacer
acgtagagcgccttcttgtctttctcgtac-	Protospacer
* *****.**** ************ ***. 

3. spacer 3.15|551766|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

aggtagaacgccgtcttgtctttct-gtata	CRISPR spacer
acgtagagcgccttcttgtctttctcgtac-	Protospacer
* *****.**** ************ ***. 

4. spacer 3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NC_048865 (Salmonella phage oldekolle, complete genome) position: , mismatch: 5, identity: 0.833

aacttttgatcatataataccattaagtaa	CRISPR spacer
aacttttgatcatataaaacccttacctac	Protospacer
***************** *** ***  ** 

5. spacer 3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MT074460 (Salmonella phage bux, complete genome) position: , mismatch: 5, identity: 0.833

aacttttgatcatataataccattaagtaa	CRISPR spacer
aacttttgatcatacaaaaccattacctac	Protospacer
**************.** *******  ** 

6. spacer 3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to KY114934 (Salmonella phage SP01, complete genome) position: , mismatch: 5, identity: 0.833

aacttttgatcatataataccattaagtaa	CRISPR spacer
aacttttgatcatacaaaaccattacctac	Protospacer
**************.** *******  ** 

7. spacer 3.6|551171|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041396 (Bacteroides ovatus strain 3725 D1 iv plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

acgtttac-caaacacctcttgttttgctgc	CRISPR spacer
-cgtccgcacaaacaccgcttgttttgctga	Protospacer
 ***...* ******** ************ 

8. spacer 3.8|551303|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MF001361 (Enterococcus phage EF5, partial genome) position: , mismatch: 6, identity: 0.8

ggcggccaccaagaggacgaagatatagaa	CRISPR spacer
ggttttctccaagaggacgaagatattgaa	Protospacer
**.  .* ****************** ***

9. spacer 3.8|551303|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MF001358 (Enterococcus phage EF1, partial genome) position: , mismatch: 6, identity: 0.8

ggcggccaccaagaggacgaagatatagaa	CRISPR spacer
ggttttctccaagaggacgaagatattgaa	Protospacer
**.  .* ****************** ***

10. spacer 3.11|551501|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053380 (Serratia marcescens strain FY plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.8

tgctcat-cctctgccaccttcgttattgct	CRISPR spacer
-gctaacgcctctgccaccttcgtcattggc	Protospacer
 *** *. ****************.**** .

11. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NC_005004 (Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-05, complete sequence) position: , mismatch: 6, identity: 0.8

aatctattttcaataataaatagtttttgc	CRISPR spacer
aacttatttttaataataattagttttttt	Protospacer
**..******.******** ******** .

12. spacer 3.17|551898|29|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007649 (Lactobacillus salivarius strain JCM1046 plasmid pLMP1046, complete sequence) position: , mismatch: 6, identity: 0.793

tgtatctaatgataatttgtctattgttt	CRISPR spacer
taaaggtgatgataatttgtctatagttt	Protospacer
*. *  *.**************** ****

13. spacer 3.7|551237|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048109 (Klebsiella michiganensis strain BD177 plasmid unnamed1) position: , mismatch: 7, identity: 0.767

tgttattgtttcgttaattattggacgatt	CRISPR spacer
cgctattgtttcgttaatgattggtatgtt	Protospacer
.*.*************** *****   .**

14. spacer 3.8|551303|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 7, identity: 0.767

ggcggccaccaagaggacgaagatatagaa	CRISPR spacer
gtcggccaccaagagggcgatgataccgtt	Protospacer
* **************.*** ****. *  

15. spacer 3.9|551369|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

taaaagcataggcatattcacttttaaact	CRISPR spacer
aactagcaaaggaatattcacttttaacca	Protospacer
 *  **** *** ************** * 

16. spacer 3.9|551369|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

taaaagcataggcatattcacttttaaact	CRISPR spacer
aactagcaaaggaatattcacttttaacca	Protospacer
 *  **** *** ************** * 

17. spacer 3.12|551567|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MH319764 (Marine virus AG-345-P14 Ga0172274_11 genomic sequence) position: , mismatch: 7, identity: 0.767

ggattcatagttgcatctgtgaaggttgtt	CRISPR spacer
gtaactgtagttgcaactgtgaaggttgct	Protospacer
* * ...******** ************.*

18. spacer 3.12|551567|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MN694353 (Marine virus AFVG_250M583, complete genome) position: , mismatch: 7, identity: 0.767

ggattcatagttgcatctgtgaaggttgtt	CRISPR spacer
ggattcatatttgcatctgtaaacatacct	Protospacer
********* **********.** .*  .*

19. spacer 3.14|551700|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MG592612 (Vibrio phage 1.247.A._10N.261.54.E12, partial genome) position: , mismatch: 7, identity: 0.767

cacagttgaagttagtcagccaacggcagc	CRISPR spacer
ctggattgaggttagtcagccaacggcggg	Protospacer
*  ..****.*****************.* 

20. spacer 3.14|551700|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MG592613 (Vibrio phage 1.247.B._10N.261.54.E12, partial genome) position: , mismatch: 7, identity: 0.767

cacagttgaagttagtcagccaacggcagc	CRISPR spacer
ctggattgaggttagtcagccaacggcggg	Protospacer
*  ..****.*****************.* 

21. spacer 3.14|551700|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MH729874 (Klebsiella phage KP179, complete genome) position: , mismatch: 7, identity: 0.767

cacagttgaagttagtcagccaacggcagc	CRISPR spacer
ttctggagaagttagtcagccaacaacagc	Protospacer
. * *  *****************..****

22. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NC_014023 (Bacillus megaterium QM B1551 plasmid pBM700, complete sequence) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc	CRISPR spacer
tatataatttcaataataaatagtttaatt	Protospacer
 ** ** *******************   .

23. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NC_014749 (Calditerrivibrio nitroreducens DSM 19672 plasmid pCALNI01, complete sequence) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc	CRISPR spacer
tttgttttttcaaaaataaatagtttttaa	Protospacer
  * * ******* **************. 

24. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc	CRISPR spacer
caacctctttcaataataaatggtttttgt	Protospacer
 * *. .**************.*******.

25. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc-----	CRISPR spacer
aatttattttcaataataaata-----tgaaaaca	Protospacer
***.******************     **      

26. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc-----	CRISPR spacer
aatttattttcaataataaata-----tgaaaaca	Protospacer
***.******************     **      

27. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc-----	CRISPR spacer
aatttattttcaataataaata-----tgaaaaca	Protospacer
***.******************     **      

28. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc-----	CRISPR spacer
aatttattttcaataataaata-----tgaaaaca	Protospacer
***.******************     **      

29. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc-----	CRISPR spacer
aatttattttcaataataaata-----tgaaaaca	Protospacer
***.******************     **      

30. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc-----	CRISPR spacer
aatttattttcaataataaata-----tgaaaaca	Protospacer
***.******************     **      

31. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022431 (Pantoea ananatis strain YJ76 plasmid p_unamed2) position: , mismatch: 7, identity: 0.767

aatctattttcaataataaatagtttttgc	CRISPR spacer
aaaatattttcaatactaaataattttaat	Protospacer
**  *********** ******.**** ..

32. spacer 3.22|552227|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to AP014250 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S40-C9, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

aataaagatgctgatactattacaccagaa	CRISPR spacer
aatacaggtgctgatactattacaatcaca	Protospacer
**** **.**************** . . *

33. spacer 3.22|552227|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to KT895374 (Bacillus phage vB_BpuM-BpSp, complete genome) position: , mismatch: 7, identity: 0.767

aataaagatgctgatactattacaccagaa	CRISPR spacer
caatattatgctgatactattacacaagca	Protospacer
 *  *  ****************** ** *

34. spacer 3.4|551039|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017756 (Cupriavidus malaysiensis strain USMAA1020 isolate pure plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

acgactgcaatgaaccagtaccaggtatcg	CRISPR spacer
tcgactgcaatgcagcagtaccagggcgac	Protospacer
 *********** * **********     

35. spacer 3.11|551501|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009573 (Sphingomonas taxi strain ATCC 55669 plasmid STP2, complete sequence) position: , mismatch: 8, identity: 0.733

tgctcatcctctgccaccttcgttattgct	CRISPR spacer
gcgccatcctctgccaccttcgacattgtg	Protospacer
   .****************** .****. 

36. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MT188223 (Acinetobacter phage vB_AbaM_D22, complete genome) position: , mismatch: 8, identity: 0.733

aatctattttcaataataaatagtttttgc	CRISPR spacer
tacacctcatcaataataaatagttttggc	Protospacer
 *. . *. ****************** **

37. spacer 3.18|551963|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 8, identity: 0.733

tagacatcatcacacaagccaaacgttttt	CRISPR spacer
agaagttcatcacacatgccaaactttttg	Protospacer
 ..*  ********** ******* **** 

38. spacer 3.18|551963|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to AP013510 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G20, isolate: uvMED-CGR-C101A-MedDCM-OCT-S30-C6) position: , mismatch: 8, identity: 0.733

tagacatcatcacacaagccaaacgttttt	CRISPR spacer
caacgagtatcacacaagccaagcgtttta	Protospacer
.*.  * .**************.****** 

39. spacer 3.18|551963|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to AP013876 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C101A-MedDCM-OCT-S39-C9, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tagacatcatcacacaagccaaacgttttt	CRISPR spacer
caacgagtatcacacaagccaagcgtttta	Protospacer
.*.  * .**************.****** 

40. spacer 3.19|552029|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030249 (Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_3, complete sequence) position: , mismatch: 8, identity: 0.733

cacctcttgataatcatctaatgttcctcc	CRISPR spacer
atcctcttcataatcttctaatgttgtttg	Protospacer
  ****** ****** ********* .*. 

41. spacer 3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to MN582059 (Podoviridae sp. ct2cs2, complete genome) position: , mismatch: 8, identity: 0.733

aacttttgatcatataataccattaagtaa	CRISPR spacer
tgaagtagatcatataatacctttaagtag	Protospacer
 .   * ************** *******.

42. spacer 3.21|552161|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NC_019924 (Clostridium phage phi8074-B1, complete genome) position: , mismatch: 8, identity: 0.733

aacttttgatcatataataccattaagtaa	CRISPR spacer
tctagttgagcatataattccattaagtca	Protospacer
  .  **** ******** ********* *

43. spacer 3.24|552358|30|NZ_CP019388|CRISPRCasFinder,CRT matches to MN693539 (Marine virus AFVG_25M73, complete genome) position: , mismatch: 8, identity: 0.733

aagtaatttgttgtgacaccagaaccgcca	CRISPR spacer
tgtgcatttgttgttacaccagaaccaccg	Protospacer
 .   ********* ***********.**.

44. spacer 3.7|551237|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032091 (Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tgttattgtttcgttaattattggacgatt	CRISPR spacer
caggtttgtttcgtcaattaatggacgaaa	Protospacer
..   *********.***** *******  

45. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 9, identity: 0.7

aatctattttcaataataaatagtttttgc	CRISPR spacer
tcagcattttcaataatatatatttttttg	Protospacer
    .************* *** *****  

46. spacer 3.16|551832|30|NZ_CP019388|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026603 (Clostridiaceae bacterium 14S0207 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

aatctattttcaataataaatagtttttgc	CRISPR spacer
tgcttatagtcaataataaatagttttaaa	Protospacer
 ...***  ****************** . 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1893177 : 1902189	7	Ralstonia_phage(16.67%)	NA	NA
DBSCAN-SWA_2	2027045 : 2037281	12	Escherichia_phage(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP019388|1893177:1902189|DBSCAN-SWA
CTTATTTTGCTTCTTCTATATAAGAGATAGCTTGACCAACTGTTGCAATGTTTTCAGCTTGATCGTCTGGGATTTGAATATCAAATTCTTTTTCAAATTCCATGATTAATTCTACAGTATCTAATGAATCTGCACCTAAGTCGTTAGTGAAGCTTGCTTCAGTTACAACTTCGTTTTCATCAACACCTAATTTGTCTACGATAATCGCTTTTACTCTTGATGCAATGTCTGACATAATCTTTTAATTTTAAGTTTTAATTAGACCGCAAAAATAAAAAACTTTATTTTAAAAATCATCTTTACCGATAAAATGTGCATCTTAATGCCAAAAATCTGTATAAGTATTTCGGTTTTGCGCCTAATTGTTAATTATTATTCTTTTTTTTGTTCTGAATAATAGCCCATTGATAGCCAATTTATGAAACGTATTGTAATTTTTGCGTCCGGAAGCGGATCTAATGCTGAAAATTTAATTAAGTTTTTTCAAAACAGCGATAATGCATCTGTTATTCAGGTACTGACTAACAATCCTCATGCCAAAGTACTAGATCGATGTAAAAGACTAAATGTTAGTGCTTTATCATTCAACAGAATAGCTTTCAGCAAGTCTGAAGATGTTCTAAATATTTTAAAATCATCACAACCAGATTTAATTGTGCTAGCTGGTTTCCTTTGGAAATTCCCTGAATTTATTCTCAAAGAATTTGAAAATAAAGTTATAAATATTCATCCTGCTTTGCTGCCTAAATATGGAGGAAAAGGCATGTATGGTATGCATGTACACAATACTGTTGTGGAAAATAAAGAAACTAAAACTGGTATAACCATTCATTATGTAAATGAAAATTATGATGAAGGAGCTATTATTTTTCAGGCTAAATGTGATATAAAAGCATCAGATACAGCAGAAGATGTTGCTGCTAAAATCCATGAATTAGAGATGGAGCATTTTCCGAAGGTGGTTGAGAAATTACTGGGCACTTAGGCTCTCGAAGTGACAACTAAATGAAATTCTTTGGTGGCTTCCAGAACCTCAGCCACCATTTAAAATATAAATGTCCAAAAAAAAGAAATATTACACGGTTTGGAAAGGTCATAAAACTGGTATTTTTGACTCTTGGGATGCTTGCAAAGCTCAAATCAAAGATTTTAAAGGGGCTCAGTATAAATCATTCGCCACTTTTGAAGCTGCAAAAAAAGCTTTTAAAGATGGACCAAAAGACTACATTGGGAAATCCAAAAGTTTTAAAAGCGAACTTTCTGATGAACAACTTAAAAAAATAGGGCAACCCAACTATAATTCCATTTCTGTTGATGCTGCGTCTTCTGGCAATCCTGGTAAAATGGAATATCGTGGTGTAGATACCAAAACAAAAAAACAACTCTTTATACAAGGTCCTTTTGAAGAAGGCACTAATAACATTGGCGAATTTTTAGCCATTGTTCACGGATTGGCATTTTTAAAACAACATAATAGCGACCGTATTATTTACACAGACTCTAAAACCGCCATGAGTTGGGTACGAAAAAAAATGTGTAACTCTAAGTTAGAGCGTAACGCCAAAAACAAACCTGTTTTTGATTTGGTAGACAGAGCTGTAAAGTGGCTAAAAACAAATGACTATTCAACAACCATAGTAAAATGGGAAACCAAAGCTTGGGGAGAAATTCCTGCTGATTTTGGTCGGAAATAATTAAATTTAGATGTTACATTGTATGTTTCACCAGCAATATATTTTATGTACTTTTGCACGGTAATTCAAACTTACTTTAATGGGTAAATTAGTAATTGTCGGAACCGTAGCTTTTGATGCTATTGAAACACCTTTTGGTAAAACCGATAAAATCCTTGGTGGAGCTGGTACATTTATCGGTCTAGCTGCTTCAAATTTTAATGTAGATTCTGCTGTTGTTTCAGTAGTTGGTGGAGATTTTCCTCAAGACTATTTAGACCTCTTGGCTAATAAGAATATTGATGTATCTGGTATAGAAATTGTAAAAGATGGTAAAACGTTCTTTTGGAGTGGCAGATACCATAATGACATGAACTCAAGGGACACTTTAGTTACTGAGCTAAATGTACTTGCTGATTTTGAACCAAAAGTTCCTGAAAGTTACAAAGATGCCGAAGTGGTTATGCTAGGGAATTTACACCCATTAACCCAAATGAGTGTGTTAAACCAAATGACAACCAAGCCTAAAATGGTAATTTTAGACACCATGAACTTTTGGATGGACTGTGCGCTAGAAGATTTACACAACACTATCAAGCACGTTGATGTCATTACCATTAATGACGAAGAGGCCAGACAGCTAACAGGTGAGTATTCATTGGTAGTTGCCGCAAGAAAAATTCATGAAATGGGACCAAGGTATGTAGTTATTAAGAAAGGTGAACATGGAGCCTTATTATTTGATGATGACAGCGTATTCTATGCGCCAGCATTACCATTAGAAGAAGTGTTTGACCCAACAGGTGCTGGTGATACCTTTGCTGGCGGTTTTGCAGGTTATTTGGCGAAAACTGAAGATTACTCTTTTGAAAATTTAAAAACAGCCGTAATTTACGGCTCTACCTTGGCTTCGTTTTGTGTTGAAAAATTTGGCACAAAGCGAATGGAAAATTTAAAAACTGAAGAAGTGCATAAACGTTTAGACCAATTTAAAAGTCTAACACAATTTGATATAGAATTAACTTAAAAAAACCAACGCGCTTAATGTTTAGCGCGTTTTTTTATTACACAATATGAGTGATGCTTTAAAACACGAGTGCGGTATTGCACTCATTAGGCTTTTAAAACCATTAGAATATTACAAAGAAAAATATGGTAGTGCATTTTATGGCGTAAATAAAATGTACTTAATGATGGAGAAACAGCACAATCGTGGACAAGATGGTGCTGGATTTGCAAGTATTAAATTAGATACCAAGCCAGGAGAGCGTTACATAAGCAGGGTACGATCTATAGCTCAGCAGCCTATTCAGGACATTTTTTCTCAAATTAACGATCGTGTTAACAAAGAAATGGCTGAGCACCCTGAATATAAAGATAACGTTGACTTACAAAAAAAGAACATTCCTTACATAGGTGAAGTACTGCTTGGACATGTACGCTATGGTACCTTTGGAAAAAATAGTGTAGAAAGTGTTCATCCGTTTTTAAGACAAAATAATTGGATGCACAGAAACCTTATTGTTGCAGGTAATTTTAACATGACCAATGTTAATGAACTCTTTAACAATCTAGTAGATATTGGTCAGCACCCAAAAGAAAAGGCAGACACCATAACTGTTATGGAAAAAATAGGTCATTTCTTAGACGATGCAGTTAGCAAAATCTACAAAGACCTAAAAAAAGAAGGCTATTCTAAAATTGAATGTTCACCACTTATTGCAGAGCGTTTAAAACTTAGTAAAATTTTAAAACGTGCTGCTAAAAATTGGGATGGTGGTTATGCTATGGCAGGTTTATTAGGCCACGGTGATTCTTTTGTGCTTAGAGATCCTGCGGGTATAAGGCCTGCTTATTATTATAAAGATGACGAAGTAGTTGTTGTAGCTTCAGAAAGGCCTGTAATACAAACTGTATTTAACGTTGCTTTTGATGATGTTAAAGAGTTAGATCCAGGACATGCCATTATCACTAAAAAATCTGGTGACATTAGAATTAAGAAAATATTAGAACCTCTAGAGCGTAAGGCATGTTCCTTTGAGCGTATTTATTTTTCGAGAGGAAGCGATGCAGAAATTTATGAAGAACGAAAAGAACTAGGAAGACTCTTAATGCCAAAAGTTCTTGAAGCTATTGATAATGACACAAAAAACACTGTTTTTTCGTTTATACCCAATACTGCAGAAACGTCCTTTTTTGGAATGATTGACACGGTTGAAGAACACCTAAATCATAAAAAAACAGAAGCCATACTTAAAGGGCAGAGAGAATTATCTGCTCAAAAGGTTGAAGAGATTTTATCAGAAAGACCACGAATTGAAAAAATTGCGATTAAGGATGTTAAGCTCAGAACGTTTATAACAGAAGATAGCAGCAGAGATGATTTAGTAGCCCATGTTTACGACGTAACTTATGGTGTAATAAAACCATCTGATAATCTCGTTATTATAGACGATAGCATTGTAAGAGGCACAACATTAAAGAAAAGTATTATAAAAATGATGGATAGGCTACGACCAAAGAAAATAATTGTTGTGTCATCCGCACCGCAAATTCGATATCCTGATTGTTATGGTATAGACATGGCCAATCTAGAAAGCTTGGTAGCATTTAGAGCTGCGCTAGAATTATTAAAGGATAATAATCAATATCACATTGTTGAAGAAGTCTATGAAAAGTGCTTAAAGCAAGTGGATCTTAAAGATAAAAATGTTGTTAACTATGTTAAAGAGATTTATGATGGTTTTACAGACGAACAAATATCAGACAAAATTTCTGAGCTGTTGAGTGATGATTCTGTTAACGCAGAAGTTAAAATCATCTTTCAACCTGTTGAAAACCTCCATAAAGCATGCCCAAAAAATTTAGGTGATTGGTATTTTACCGGTAATTATCCAACTGATGGTGGCAACAGAGTAGTTAACAGAGCTTTTATAAATTTCTATGAAGGCAATAATGAGCGTGCTTACTAATAATCACGTAAATTTAGCTTTTAATCCGAAAAAATATGTATTTAATCGATGAAAATTGCTTTTTGTCTAATATTTACCGCTATTTTAACAAATTAAAATTACATTGGCTTCACCATAACATAAGTAGGTTAAGTTCATGGTAGATTTGGGGCAAAAAAAGGTGAACACTGTTCACCTTTTTTTATGGATTTTTATTAAAGTAATACTTTAGCTTATTTAGCATAAACAAAGTGTTACTTTTAAACTTAATTTTACTTTAAACACAGAGTATCCACGCTTAGACTAATATATAGGTCGTTTGTCCGAAAAATTTAAATATTAAATTATTGTAAACTTATATTTGACTCACCATAACATAAGTAGGTTAAGTTTATGGTAGATTTGGGGCAAAAAAGGTGAACTCTCTGTTCACCTTTTTTCATTTATAACTGTTACATGACTTTTAATTTCAAAACTTAAATCATAAAAAAGCCAGACTGGTTTGTCTGGCTCAAACAATATATTTAACTATTTCTTATTTAGCCTCAGCGTAGCGACGCTCAACTTCATTCCAGTTAATGACCTTAAAAAAAGCGTCGATATAATCTGGTCTTCTGTTTTGATAGTTTAAGTAGTAGGCATGCTCCCAAACATCTAATCCTAAAATTGGTGTGCCACCGCAACTAACGCCTGGCATTAGTGGATTGTCTTGATTTGGAGTAGAGCAAACCTCAACCTTACCGCCTTTGTGTACGCACAACCAAGCCCAACCTGAACCAAATTGTGTAGCTGCAGCTTTTGAAAAAGCTTCAATAAAGGCATCTTTAGAACCAAATTCTGCTTCAATAGCATCTTTTAATTCTCCAGATAAATAACCTCTATCTTCAGGATTCATTACATCCCAAAATAAAGAGTGGTTATAAAAACCACCGCCATTATTTCTTACACCACTGTTATCCATATCTAGATTAGTCAAGATATCTTCAATAGATTTTCCTTCTAGATCAGTACCTTCAATGGCAGCATTTAACTTTGTTGTGTAACCATTGTGATGTTTAGTATGATGGATTTCCATTGTACGTGCATCAATATGTGGTTCTAGTGCATCATATGCATATTTTAATTTTGGTAATTCAAAAGCCATAGTGTGTATGTTTTTTAGTGTTAGTATTTCAATTTTACCAAATTTACAATTTTGAAAACAAGAAGTTCTAAATAAATTATTAAGATTCCCTATTTTGGTATAAAATTTATCTTTTGCATAACTCAAACTTTAAAATATACAACGCATCAGCAGGCAGCGGTAAAACCTTTACCCTAGCAAAGACCTATATTAAAATTCTTGTTAATTCAAAAAACAACGAACAGTTTAAGTCTATTCTAGCTATAACATTTACCAACAAGGCTGTTGGTGAAATGAAAGAGCGCATTATTGCAATGCTTAAGTTATTCTCTCAAGATGAGCATTTAATTAAGCCTCACCCAATGTTTAGGGCTATCTGCGAAGAACTATCAATTACCGCAGAGTTTCTTAAAATAAGATCTAAAAATATATTAAAATCTATAATGCACAATTATGGAGGTTTTGATATTTCAACGATTGATGGTTTTACACATAGAGTTATAAGAACTTTTGCCCACGATTTAAAACTCCCTGTTAATTTCGAAGTAGAATTAGACCAAGAAAGGCTTCTCAACGAGGCCGTGGATAATTTAATTTCTAGAGCAGGAGACAGCGAAATATTAACCCAAACATTAGTTGATTTTGCTATTGAAAAAGCAGATAACGATAAAAGTTGGGATATTAGTTACGACTTTAATAACATAGCAAAGCTCTTAGTAAACGAAAATGATATTGCAGCAGTTGAGACCTTTAAGCACAAAACCATTGAAGACTTTAAAGTTCTAAAAACTATCTTAGTAAAAGACATTGCAGAAATTGAAAAAGACATTATTGCATTTGCAGGTGAAGCATTAACTCTGATTGAAGAAAGCGGCTTACAGTTTGATGATTTTAATAGAAAATCGCTGCCCAATCACTTTTACAACTTATCGCAGGGCAATTATGATGTTTCCTTTAATTCATTATGGCAAAACGATTTAGTTGCAAGCGGTACGCTTTACCCAAAACGTGTTACCGATACCATAGCTAGCACCATAGAGAGTATTCAACCAAACTTATCCGAGGTATTTTTAAAAACTAAAGCTTTAATTTTTGAGCTTAAACTTAAACAAGGGTTTTATAAAAATATTACACCGCTTTCCGTATTAACCGTTATTCAAAAAGAGTTAAATCTTTTAAAAGAGGAGCAAAATAAAATGCTTATCTCAGAATTTAATAAGATTATAAGCAACGAAATTAAAGGCCAACCAACACCATTTATTTACGAACGTTTAGGTGAAAAGTTTAAGCACTATTTTATTGATGAGTTTCAAGATACCTCAAAAATGCAATGGGAAAATCTGGTGCCATTGCTAGATAGCGCACTTTCAACCTCAATAGGCTCAACTATGCTTGTTGGAGATGCCAAACAAGCCATTTACAGATGGCGAGGTGGTGAGCCAGAACAGTTTATTAACCTCTACAATAAATTGACCAATCCATTTCAGATTGAAGCAGAAGTGCTAAACTTAGATACCAATTACAGAAGTGCTAAAGAAATTATAAATTTTAATAATAGTTTTTTTGAGTTTTTAGGTGAACATTACTTTAACGATAGTAGATACGCTGAGTTATATTTAAATTCTAAACAAAAACCCTCTTTAGAGACCGAAGGGTTTGTAAGTATTGAGTTTCTAGATATTTCTAAAGACGATAACCCTACTGAATTATATACCAACAGTGTTTTTAAAACCATTAAGCAATGTCTTAAAAATGGTTTTAATCCAGATGATATTTGTATCATAGTAAGAAAACGAAAAGAAGGTGTTGAGATTGCAAAATTTCTTAGTGAAAAAGGAATTAAAATAACATCTTCTGAAACTCTGTTATTAAAAAACTCCGATAAGGTTCAGTTTATTAATTCATTCTTAAAACTACTGCTTCAAACAGATAATGATAACTTAAAAATTGAAGTTCTAACCTTCATTGCAAGCCAAAACAATGTAGAAGATATACATGCTTTTTACCATTTATATTTAACTCTTGGTTTTGATAAAATGCTCAAAAGTCTTGAGAACCTAAACATCTTTTTAAATAAAAAAACACTTTTACAATTGCCTTTATATGAGCTTGTTGAAGAATTAATTAGAGCTTTTAAACTCCATAATACATCCGATGCGTTTATTCAATTTTACTTAGATATTGTTTTAGAGTTTACTCAGCAACAAAACGCGGATTTATCATCGTTTATTGATTATTTTGAAAGGAGAAAAGACAGTCTCAGCGTTATTTCTCCCCAAAATAATAATGCGGTGCAGATAATGACCATTCACAAGTCTAAAGGTTTAGAGTTTCCTATAGTTATTTTTCCCTTTGCAGACCTCAATATCTACAAAGAAATAGACCCTAAAGTTTGGTTCCCGGTTAAAAAAAACAAGTATCAAGGATTCGACACATTGTTACTTAATTACAATAGTGATGTTGAACACTTTGGTGAAGTTGGCAACCACCTTTACAAACTTAAAAGGTCTCAATTAGAGTTAGACAATATTAATCTTCTCTACGTAACATTAACAAGAGCTGTAGAGCAATTATTTATTATTGCCAAAAGAGATATAAACTCTAAAGGCGTAGTCAATGACAAAACATATGCTGGTATGTTTATCTCCTATTTACAAAAAAAGGAGTTATGGTTAGACCATACACTTACGTATAGTTTTGGCAATTCAAAAAGCATAAACCAAAAAACAGAAGTACACACCAATTCTAATACAATCAACCTTATCTCCGTTTCTAAAGAAGATCATAACTTAAGAATAATTACAAAAGCTAGTCAACTCTGGGATACCAAACAAGGAAAAGCTATAGAACGAGGCAATTTGGTTCATCTTTTACTATCTAAAATTGTTACAAAAGAAGATATTGATTTTGCTATAGACGATTTGATAGCCTCTGGAGACATTTCAACATCAGATAAAGAAGCGCTTAGAACAATTATACTAGAGGTTACAGAACATCCAAAAATCAAATTATACTTTAATAACATCCATAGAGTTTATAACGAAAGAGATATCGTAACACCAACAAGTCAGCTACTGCGACCTGACCGACTTAATATCAATCAAAAAAATGAAGTTACAATCATTGATTACAAAACAGGTGAGCAAAAAATATCTCATAGCACTCAACTTAACTCCTACACTTCTATTCTAAACACAATGGGCTATGTTGTAACAAATAAAATTCTTGTTTACATAAATGAACGTGTTGAAGTCATTGAAGTCTAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP019388|1893177:1902189|1893594_1894161_+|WP_076619076.1|DBSCAN-SWA
MKRIVIFASGSGSNAENLIKFFQNSDNASVIQVLTNNPHAKVLDRCKRLNVSALSFNRIAFSKSEDVLNILKSSQPDLIVLAGFLWKFPEFILKEFENKVINIHPALLPKYGGKGMYGMHVHNTVVENKETKTGITIHYVNENYDEGAIIFQAKCDIKASDTAEDVAAKIHELEMEHFPKVVEKLLGT
>NZ_CP019388|1893177:1902189|1893177_1893411_-|WP_008269813.1|DBSCAN-SWA
MSDIASRVKAIIVDKLGVDENEVVTEASFTNDLGADSLDTVELIMEFEKEFDIQIPDDQAENIATVGQAISYIEEAK
>NZ_CP019388|1893177:1902189|1894231_1894870_+|WP_076619078.1|DBSCAN-SWA
MSKKKKYYTVWKGHKTGIFDSWDACKAQIKDFKGAQYKSFATFEAAKKAFKDGPKDYIGKSKSFKSELSDEQLKKIGQPNYNSISVDAASSGNPGKMEYRGVDTKTKKQLFIQGPFEEGTNNIGEFLAIVHGLAFLKQHNSDRIIYTDSKTAMSWVRKKMCNSKLERNAKNKPVFDLVDRAVKWLKTNDYSTTIVKWETKAWGEIPADFGRK
>NZ_CP019388|1893177:1902189|1898335_1898944_-|WP_076621310.1|DBSCAN-SWA
MAFELPKLKYAYDALEPHIDARTMEIHHTKHHNGYTTKLNAAIEGTDLEGKSIEDILTNLDMDNSGVRNNGGGFYNHSLFWDVMNPEDRGYLSGELKDAIEAEFGSKDAFIEAFSKAAATQFGSGWAWLCVHKGGKVEVCSTPNQDNPLMPGVSCGGTPILGLDVWEHAYYLNYQNRRPDYIDAFFKVINWNEVERRYAEAK
>NZ_CP019388|1893177:1902189|1894949_1895876_+|WP_076619081.1|DBSCAN-SWA
MGKLVIVGTVAFDAIETPFGKTDKILGGAGTFIGLAASNFNVDSAVVSVVGGDFPQDYLDLLANKNIDVSGIEIVKDGKTFFWSGRYHNDMNSRDTLVTELNVLADFEPKVPESYKDAEVVMLGNLHPLTQMSVLNQMTTKPKMVILDTMNFWMDCALEDLHNTIKHVDVITINDEEARQLTGEYSLVVAARKIHEMGPRYVVIKKGEHGALLFDDDSVFYAPALPLEEVFDPTGAGDTFAGGFAGYLAKTEDYSFENLKTAVIYGSTLASFCVEKFGTKRMENLKTEEVHKRLDQFKSLTQFDIELT
>NZ_CP019388|1893177:1902189|1899057_1902189_+|WP_076619085.1|DBSCAN-SWA
MHNSNFKIYNASAGSGKTFTLAKTYIKILVNSKNNEQFKSILAITFTNKAVGEMKERIIAMLKLFSQDEHLIKPHPMFRAICEELSITAEFLKIRSKNILKSIMHNYGGFDISTIDGFTHRVIRTFAHDLKLPVNFEVELDQERLLNEAVDNLISRAGDSEILTQTLVDFAIEKADNDKSWDISYDFNNIAKLLVNENDIAAVETFKHKTIEDFKVLKTILVKDIAEIEKDIIAFAGEALTLIEESGLQFDDFNRKSLPNHFYNLSQGNYDVSFNSLWQNDLVASGTLYPKRVTDTIASTIESIQPNLSEVFLKTKALIFELKLKQGFYKNITPLSVLTVIQKELNLLKEEQNKMLISEFNKIISNEIKGQPTPFIYERLGEKFKHYFIDEFQDTSKMQWENLVPLLDSALSTSIGSTMLVGDAKQAIYRWRGGEPEQFINLYNKLTNPFQIEAEVLNLDTNYRSAKEIINFNNSFFEFLGEHYFNDSRYAELYLNSKQKPSLETEGFVSIEFLDISKDDNPTELYTNSVFKTIKQCLKNGFNPDDICIIVRKRKEGVEIAKFLSEKGIKITSSETLLLKNSDKVQFINSFLKLLLQTDNDNLKIEVLTFIASQNNVEDIHAFYHLYLTLGFDKMLKSLENLNIFLNKKTLLQLPLYELVEELIRAFKLHNTSDAFIQFYLDIVLEFTQQQNADLSSFIDYFERRKDSLSVISPQNNNAVQIMTIHKSKGLEFPIVIFPFADLNIYKEIDPKVWFPVKKNKYQGFDTLLLNYNSDVEHFGEVGNHLYKLKRSQLELDNINLLYVTLTRAVEQLFIIAKRDINSKGVVNDKTYAGMFISYLQKKELWLDHTLTYSFGNSKSINQKTEVHTNSNTINLISVSKEDHNLRIITKASQLWDTKQGKAIERGNLVHLLLSKIVTKEDIDFAIDDLIASGDISTSDKEALRTIILEVTEHPKIKLYFNNIHRVYNERDIVTPTSQLLRPDRLNINQKNEVTIIDYKTGEQKISHSTQLNSYTSILNTMGYVVTNKILVYINERVEVIEV
>NZ_CP019388|1893177:1902189|1895922_1897821_+|WP_076619083.1|DBSCAN-SWA
MSDALKHECGIALIRLLKPLEYYKEKYGSAFYGVNKMYLMMEKQHNRGQDGAGFASIKLDTKPGERYISRVRSIAQQPIQDIFSQINDRVNKEMAEHPEYKDNVDLQKKNIPYIGEVLLGHVRYGTFGKNSVESVHPFLRQNNWMHRNLIVAGNFNMTNVNELFNNLVDIGQHPKEKADTITVMEKIGHFLDDAVSKIYKDLKKEGYSKIECSPLIAERLKLSKILKRAAKNWDGGYAMAGLLGHGDSFVLRDPAGIRPAYYYKDDEVVVVASERPVIQTVFNVAFDDVKELDPGHAIITKKSGDIRIKKILEPLERKACSFERIYFSRGSDAEIYEERKELGRLLMPKVLEAIDNDTKNTVFSFIPNTAETSFFGMIDTVEEHLNHKKTEAILKGQRELSAQKVEEILSERPRIEKIAIKDVKLRTFITEDSSRDDLVAHVYDVTYGVIKPSDNLVIIDDSIVRGTTLKKSIIKMMDRLRPKKIIVVSSAPQIRYPDCYGIDMANLESLVAFRAALELLKDNNQYHIVEEVYEKCLKQVDLKDKNVVNYVKEIYDGFTDEQISDKISELLSDDSVNAEVKIIFQPVENLHKACPKNLGDWYFTGNYPTDGGNRVVNRAFINFYEGNNERAY

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008269813.1|1893177_1893411_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	1.7e-06	38.1
WP_076619076.1|1893594_1894161_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.0e-16	30.1
WP_076619078.1|1894231_1894870_+	ribonuclease H	R4TF97	Phaeocystis_globosa_virus	2.4e-05	29.3
WP_076619081.1|1894949_1895876_+	sugar kinase	NA	NA	NA	NA
WP_076619083.1|1895922_1897821_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.2e-12	26.3
WP_076621310.1|1898335_1898944_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	4.7e-59	56.5
WP_076619085.1|1899057_1902189_+	AAA family ATPase	A0A1P8CWU5	Bacillus_phage	6.6e-16	24.9

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP019388|2027045:2037281|DBSCAN-SWA
TATGAATAATAAAAAATCCTTGCTTGTTACTGGTGGCGCTGGCTTTATAGGTTCTAACTTTATAATCCACACACTAAAAAACAACAAAGAAATTAACATCATAAATTTAGACAAGCTTACCTATGCGGGTGAGCTTTCTAATTTAGAACCAATTGCAGATAGTAAAAATTACCAATTTGTAAAAGGGGATATCTGTAACGAAAAATTGGTTGAGAGCCTTTTCGAAGAACATAAATTTACAGGTGTAATTCATTTTGCAGCAGAGTCACACGTTGATAATTCAATACTAAACCCAGATGCCTTTATTAAAACCAATATATATGGTACTTTTAATCTATTAAATATTGCAAAACGATACTGGATGCAAAAACCATTTCTTGCAAAAAAAGGATGCAAAAACAATAGGTTTTTACACATCTCAACCGACGAAGTATATGGCGCACTAGGCAAAAAAGGGTTGTTTACAGAAGACACACCCTACGCACCAAACAGTCCTTATAGTGCCTCAAAAGCATCATCAGACTTTATAGTAAGAAGTTATTTTCATACCTATGGTTTAAATGTAGTAACTACCAATTGCAGTAATAACTATGGACCCAAACAACACGATGAAAAGTTAATACCAACTATTATTAGAAAAGCTGTCAACGGAGAAGACATACCAATTTATGGCGATGGTAAAAATATTAGAGATTGGCTTTATGTTAAAGATCATTGTGAAGGTATATATTTGGCTTTTAACAAAGGAAAAGCGGGCGAAACCTATAACATAGGAGGTAGAAATGAAAGAGACAATCTTTATATAGCTCATAAAATATGTGAAATATTAGACGAGGTAAGGCCTAAAAACTCAAAATACTCTGATCAAATTACATTTGTAAAGGATAGGCCAGGACATGACTTTAGATATGCAATAAACGCAACTAAAATTGAGAACGAATTAGGCTGGAAAGCAAATGAAAATTTTGAAACAGGTATTCTAAAAACCATAAAATGGTACTTAAATAAATACGATAAACCATGAAAGGAATTATACTAGCTGGTGGGTCGGGCACGAGATTACATCCTTTAACCTTATCAGTAAGTAAGCAATTAATGCCTGTATATGATAAGCCAATGATTTATTATCCTTTGTCTACGTTAATGTACTCAGGTATTAATGAAATTTTAATTATATCAACACCCAAGGACCTACCTCTTTTTAAGGATTTACTAGGAGATGGAAAGAAGTATGGCTGTGAATTTGAATTTGCAGTACAGGAATCACCCAATGGTCTGGCGGAGGCTTTTATAATCGGAGAAGAGTTTATTGGAGAAGATAAAGTTGCATTAATTTTAGGAGATAACATTTTTTATGGTACTGGATTGTCAGATCTTTTACAGAGAAACAATAATCCAGATGGTGGTATTATTTACGCGTACAGAGTGTACGATCCTGAACGTTACGGTGTTGTAGATTTTGATGAAAAAGGACAAGCCATATCTATAGAAGAAAAACCTAAAAAACCAAAATCTAACTTTGCGGTTCCAGGTATTTATTTCTATGATAATGATGTTGTGGATATCGCAAAAAGCATAAAGCCAAGCCATCGAGGCGAACTAGAAATCACAGATGTAAACAAAGAATATCTTAGAAGAAACAAACTCAGTGTTAGTATCTTAGATAGAGGCACCGCTTGGTTAGATACAGGTACTTTTGATTCATTGATGCAGGCATCACAGTTTGTAGAGGTGATAGAGAATAGACAGGGCCTTAAGATTGGCTCTATTGAAGCGGCAGCCTATGAAATGGGATATATATCAGAAGAGAAGTTTAGGGCCTTAGCAAAGCCGTTAATGAAAAGTGGTTATGGTAAAAACCTTTTAGATTTAATAAAAAACAAAAAATGATAGCCACCAAAACAAATCTAAAAGGTTGTTTTATTATTGAGCCTCAAGTATTTCAAGATGATAGGGGTTATTTTTTTGAAAGTTTTAATCAGCAAACCTTCAATAACTTAATTGGTAAACCCGTTAACTTTGTGCAAGACAATGAATCTTTGTCATCTAGAGGAGTCATAAGAGGTTTGCATTTTCAAGAAGGTGAGTTTGCCCAAGCAAAGCTTGTTAGAGTCATTAAGGGCTCAGCTTTAGATGTTGCTGTAGATATAAGAAAAGATTCACCAACTTTTGGCCAACATATAGCCGTTGAGCTAACAGAAGATAACAAAAAACAGTTGTTTGTTCCAAGAGGATTTGCACACGGGTTTTCTGTATTGAGCGACACAGCCATCTTTTCATATAAATGTGATAATTTTTACAATAAAAATGCTGAAGCAGGGATTATATACAACGATCAGTCTTTAAACATCGATTGGAAAATTAAACCTGAAGAAGCGCAACTTTCAGAAAAAGATATTATTTTACCAACCTTAGAAGCGTACTTTAAATGACACCAAGAATATTGGTTACAGGAAGCAATGGGCAGTTAGGAACATGTATCAAAGATGTTGACGACAATAAATTTGATATTAAATACGTAAGTTCTTCGGATCTCGATATAACAAATAACAAAGAGGTTGAAAGTTTTTTTGAACAGCAAAAAATAGATTGGTGTATAAATTGTGCTGCTTACACAGCCGTTGATAAAGCAGAGTCTGATTACAACAGCGCTTTTAATGTTAATGTTTCTGGGGTGAAAAACTTAGCAGAAGCATGTAAAGCGTATAATGTTAAGTTAATACATGTTTCGACGGATTTTGTTTTTGATGGTGAACAAAATAAACCATATAAAGAATCTGACCCAACAAACCCTCTTAGTGTTTATGGAGACACTAAATTAAAAGGGGAACAAGAGGTTTCAAAAGCTTTAAAAGAATATTTTATTTTAAGAACCTCGTGGTTGTACTCAGAACATGGTGCTAACTTTTTGAAAACGATGCTTCGTCTTTCTAAAGATAAAACTCAACTAGGAGTTGTTGGTGACCAAATCGGTACGCCTACTTACGCTAAAGATTTAGCTAAAGCAATATTGCTCTTTATAGAAAAGGATATTTCTAACTATGGAATATATCACTACAGCAACAATGGAGTTGCGAGTTGGTACGATTTTGCTAAAGCTATTTTTGAGATTCATAAAACTAATATACAACTAAACAATATATCTACGGCTCAATTTCCAACACCAGCAAAGCGCCCTCGCTTTAGTGTTTTAGATAAAACAAAAATAGAAACAGCACTTAGGCAAAACGTCCCATATTGGAGAGACAGTCTAATAACCGCAATGCAAAATATACAAAATGAATAAACTACTACAAATAGCTATCAAAGCATCACTAGAAGCAGGAAAAGTAATAATGCAAGTGTATGACACCGCTTTTGATGTAGAAATAAAAGATGATAAATCACCGTTAACAGAGGCAGACAAGAAAGCCAATGATGTTATAAATTCATTCCTAATTCCAACAGAGATCCCTATTATTTCAGAAGAAAACAAACAAACGGACTACAATGTTAGAAAGACTTGGAAAACATGTTGGGTAGTTGATCCTGTAGATGGGACTAAAGAATTTATAAAAAGAAACGGTGAGTTTACTGTAAATATAGCTTTGGTAAATGATGGAAAACCGGTTTTAGGCGTTATTTATGTGCCAGCAGTAAAAACTATCTATTTTGCCAATGTAGAGAGCAATAAGGCGTTTAAAGCAAATTTAGATTCTCATAATGTTACAGTGGAAACTATTTTAAAACTAGCAAAACCACTACAACCAAAGAATAACAGTTCTAACAAAGTTGAGGTTGTTGGAAGTCGCTCACACATGAACGAAGATACTTTAAACTTTGTTGAGGATTTAAGAAATGAAGGTAAAGAGGTAGAAATTGTATCAAAGGGAAGCTCATTAAAATTCTGTTTGGTCGCAGAAGGTAATGCCGACGTATATCCACGTTATGCACCAACTATGGAATGGGACACTGCAGCAGGTCAAGCCATATGTAATGCAGTAGGTATAAAGGTAATCTCCAAAGAAACCAACCAACCACTAATCTATAACAAAGAAAACCTATTAAACAGCTATTTTTTAGTTAGTAAGTAAATGGCAGACGTATCATATAAGAGACATATAGCCAAAACCATTACTTGGAGACTGGTAGGTACACTAGACACCATACTTTTATCATGGTTAGTTACAGGAGACCCTTTAGCAGGTTTAAAAATAGGCTTAGCAGAAATTACAACAAAATCAGTTTTATACTATCTACATGAGCGCGTATGGTATAAAATAAACCTCTCAAAAGATGGAATATTACTAGAAAGTAGAAAACGGCACATAGCAAAAACATTTACTTGGCGTTTTATAGGCACATTAGACACCATGACTTTGGCGTGGATAATATCAGGAAACCCCTTAGCAGCCATGCAAATAGGGTTTGCAGAAGTAATCACAAAAATGGTGCTTTACTATATTCACGAACGCGCTTGGTATAAAATTAACTTTGGTATAACAAAAAGAAAATAAAGCTTATAATGAAAGACAATATAACACCTCACAATTATCAGATCTCAGTAAGAGATAGAAGAGAGAGAAACGGCCATAATTCGTTTTTGTTATGGTTTACGGGTCTTTCAGGTTCGGGTAAATCAACTATAGCCAATGTTGTAGAACAAAAACTATTTAAAGAAGGCATAAAAACATATACCTTAGACGGTGACAACATGAGGAAAGGAATTAATGGTGATTTAACCTTTTCTCCAGAAGATAGAACTGAAAATATCCGTAGAATTGCAGAGGTGGCTAATTTAATGATAGATGCTGGTTTAGTGATACTTGCAGCTTTTGTGTCACCCTACAAAAAAGACCGAGAGAACATTAGAAGTATCGTTAAAGATGTTAACTTTGTTGAAATATTTGTGAATACCAGCGTAGAAGAGTGCGAAAGACGAGACGTAAAAGGACTTTATAAAAAAGCACGCGCTGGCGAAATAAAAAATATGACAGGAATTTCAGCACCTTATGAAGCACCAGAAAATCCTGATATTGAAATAAGAACAGAAAACGAATCGGTAGAGTCAGCAGCTCAACGAATCGCAGAATATATAACACCAAAATTAAAACTCAACGATGAGTAAGTACTATTTAAATTATCTAGACGAGTTAGAGAGTGAAGCTATTTTTGTTTTACGTGAAGTATGGGCACAATTTGAAAATCCGGTAATATTATTCTCTGGAGGAAAAGATTCTATTTTGGTAACACATTTAGCCAAAAAAGCATTTTATCCAGCGAAAATCCCATTTCCCTTAATGCATGTAGATACAGGGCATAACTTTCCAGAAACTATTGCTTTTAGAGATAATATAATTAAAGAATTAGGAGCACAACTAATCGTAGGTTCTGTACAAGAATCTATTGACGAAGGGCGCGTTGCAGAAGAAAAAGGAAAGAACGCTACACGAAACGCACTTCAAATTACCACACTTCTCGATGCTATCGAAACTAATAAGATAGATTGTGCTATTGGCGGTGGGCGTCGTGACGAAGAAAAAGCAAGAGCCAAAGAGCGCTTCTTTTCTCATAGAGATGATTTTGGACAATGGGATCCTAAAAACCAACGACCAGAATTGTGGAATATATTCAACGGAAAGCACTTTGAAGGCGAACACTTTAGAGCATTCCCAATAAGTAACTGGACAGAAATGGACGTATGGAACTACATTAAACGCGAGAATATCGCTATTCCATCATTATACTTTGCACATCAACGTGAGGTAGTTTGGAGACAAGACTCATGGATTCCAAATTCTGAATTTTTAGTATTAGAAGACCATGAAGAAGTAGTGACAAAAAAAATACGCTTTAGAACGCTAGGCGATATAACTATAACAGGTGGTGTAGAATCTGACGCAGATACATTAGAGAAAATTGCTGCTGAAGTTGCTGGTATGCGCAATACAGAGCGAGGAAACAGAAGCGACGATAAGCGATCAGAATCTGCTATGGAAGACCGTAAGCGTCAAGGGTACTTTTAGTCAAAATCAAATTAAAAAATTAACAGTTATGCTGAAGTCATTTTAGCATTTCATACAAAAAATAATATGTTAGACAACAATCAACTATTACGTTTTACAACCGCAGGAAGTGTAGATGATGGAAAAAGTACATTAATAGGGCGTTTGCTATACGATTCTAAATCTATTTTCGAAGACCAACTAGAAGCAATTGAGAATACAAGTAAGAAAAAAGGTCATGACGGCGTAGATTTAGCACTATTTACAGATGGTTTAAGAGACGAAAGAGAGCAGGGTATCACCATTGATGTCGCATACAGATATTTTACAACGCCAAAGCGTAAATTTATAATTGCAGATACACCAGGGCATATACAATATACGCGCAACATGGTTACTGGAGCATCAACAGCTAATGTAGCGACTATTCTAATTGATGCACGCCATGGCGTAATTGAGCAAACAAAACGCCATGCATTTATAGCATCACTATTGCAAATACCGCACATTATTGTTTGTGTAAATAAAATGGATTTGGTTGATTTCTCCGAAGAGGTCTTTAATAATATTGTATCAGAATTTGAAGAGATTTCTTCAAAAATGCTTGTTAAGGATGTTCGATTTATACCAATGTCGGCACTATTAGGAGACAATGTTGTAAATAAGTCAGAAAACATGCCTTGGTACCAAGGCGCACCGATGCTACACACTTTAGAAACGATGCATATTAGTAGTGATATTAATAAAGTAGATGCACGCTTTCCTGTACAAACGGTAATAAGGCCACAACGCGACGGGTTCATTGATTATAGAGGTTATGCAGGTCGTGTAGCTAGTGGAATTCTAAGAAAGGGTGATGAGGTTACTGTAATGCCATCAGGTTTTACATCAAAAGTAAAAAGTATCAACCTCTTCGATAAAGAGTTGGACGAAGCCTATGCACCAATGTCAGTTTCTATTACTTTAGAGGACGATATAGACATTAGTCGAGGAGATATGATAGTACGTTCTAACAACAAGCCAGAACCTTCTCAGGATATTGAAGTGATGTTATGTTGGTTAAATAACAGTCCAGCAAAACCAAGGGCAAAATACACCATTAAACATACGTCTAATGATCAAAAGGCCATGATAAAAGAGGTGGTATATAAATACGACATTAATACTTTAGAGCGTAAGAGTGAAGATAGTGATTTAGCGATGAATGATATAGCCAAAGTTAAAATACGCACTACAAAACCCTTAATGATTGATTCTTACCGAGAGAACAGGGCAACTGGAAGTATTATTCTAGTAGATGATGCCACTAATGAAACGGTTGCTGCAGGAATGATCGTATAATTTATAATAACAAATCACACTTTTACACATACCAAAAAGATAATATGTTTACATTAAAGAATAAATCAATTTTAATAACTGGTGGGACAGGGTCACTAGGTAAAGCACTTACTAACCATATACTCAACAAACACCCAGAAGTAAAAAAATTAGTTATATTTTCTCGAGACGAACAGAAACAATTTCAGATGGCTCAAGAGTATCCATCAGACAAATTTCCTCAAATTAGGTTTTTTATTGGCGATGTTAGAGATAGAGAACGACTAGAGAGAGCTTTTCAGCACATAGATTATGTCATACACGCTGCAGCAATGAAGCACGTTCATATTGCAGAATATAACCCAGACGAGTGTATTAAAACCAACATTAATGGCGCAGAAAATGTAGTAGATGCCTGCTTTAAAACTAATGTAGAGCGGGTCGTAGCCTTGTCAACAGATAAAGCGTGTGCACCCATAAACTTGTATGGCGCGACCAAGCTTACATCAGATAAGTTATTCATTGCGGCAAACAACATTAAAGGGCAAAATCCAATTAAGTTTTCGGTTGTAAGGTATGGCAACGTTATGGGATCTAACGGATCGGTAATCCCTTTCTTTATTAATAAGAAAAAAGAAGAAAATAGGTTGCCAATTACAGACCCAAACATGACGCGATTTAATATCTCTTTACAAGGAGGTGTAGATATGGTAATGCATGCCTTAGAACACGCTTGGGGAGGCGAATTATTTGTCCCTAAAATACCATCTTATAAAATCATGGATGTTGCTGAGGCCATTGGACCTCATTGCGAAAAGCCAGTAATTGGTATTAGACCAGGTGAGAAAGTGCATGAAGAAATGATAACAGCCTCTGACTCGTTTTATACCTATGATTTAGGAAAATATTATACCATTTTACCAGCAACCCATCAGTGGAGTTTAGACGACTTTATAGAAACCTTTGATGCAAAAAAAGTACCACAAGGTTTCAGTTACAATTCTGGCGATAATAGTGATTGGGAAACTATAGAAAGTTTAAGAGCTCTAATTAAAGAACACGTAGACCCAACTTTTGAAGTATAATGAATAAGCCTATCATACCATACGGACGTCAGTATATTGATCAAAACGATATCGATACAGTTATCGATACATTAACCGCAGATTTTTTAACACAAGGCCCTAAGGTTATTGAATTTGAAGAAAAATTTGCTAAATACATTGGTAGCAAGTATGCTGTAGCTGTTTCTAACGCAACAGCAGGGCTTCACATCGCAGTTATGGCTTTAGGATTAAAACCTGGTGAGCGAGTTATAACAACACCAATAACATTTGCAGCATCTGCCAACTGTGTGAGGTATTGTGGTGGTGAGGTCTGGTTTGCAGACATAGACTCTGACACCTACACGCTGTCTTTAGAAAGCACTAAGAAGCTCATAGAAAGTAAGCCGAAAGGATTTTTTAAAGGCATTATACCTGTAGATTTTGCAGGCTTACCCGTAAACTTAGAACAATTTAAGGCATTGGCAACTGAGCATGATTTATGGATTATTGAAGATGCCTGCCATGCGCCAGGAGGTTATTTTTCAGATACAAAAGGTGTAAAACAAATGTGCGGTAACGGCAAATATGCGGATATTGGGATTTTTTCGTTTCACCCCGTAAAACATATTGCTTGTGGTGAAGGAGGTATGGTGACTACTAATTCAAAAGATTTGTACGACCGACTATCTCGACTTAGAACACATGGTATTACAAAGGATAATATGAGCGAAAATCATGGTGGCTGGTATTACGAGATGCAAGAACTTGGATACAACTATAGGTTAACAGATATTCAATCGGCATTGGGTATTACGCAGTTAGAAAAAAACAATGCAGGTGTTAGAAGAAGGAATGAAATAGCTCAAAATTATAAAAATGCCTTTTATGGTAAAATCAAGTTTCAAAGTCTCCCAGAAGGAACTTATAATGCCCACCATTTATTTGTTATTGAGGTAGAAAACAGAAAAGCACTCTACGATTATTTAAGAGAAGCAGGTATATACGCACAAATACATTATATCCCTGTACATACACTACCGTATTACAAATCTATTGGATACGAAGGTGCTGACCTAGGAAATTCAGAAGCGTATTATTCAAAGTGTATTAGTTTGCCCATGTACCCAACCCTAACCGATGAAGAACAATCTTTTGTTATTGAAAAAGTATTAGGGTTTCTTAATGAGTAACTTAGCCATCATACCAGCACGAGGAGGAAGTAAAAGAATACCAAAAAAGAATATCAAATCTTTTTTAGGAAAGCCCATTATTGCGTATTCTATTGAAGCAGCCTTAAAAAGCAATTGCTTTGAAGAGGTTATGGTCTCTACAGACGACTCGGAAATTGCTAAAATTGCTGTTCAGTATGGCGCAAAAGTGCCTTTTATAAGAAGCCATGAAAACGCAAATGATTTTGCGGTTTTAGCAGATGTTATTAGTGAAGTTCTCGAGAGATATGCATCTAATAACAAAAAATTTAAAAACATTTGTTGTCTTCTACCAACAGCCCCTTTTATAGATTCTGAAAAGCTAAAAGAAGCGTATAGAATTTTTATGGATAAAAAATTTGACAGCATATTTCCAATTCTGGAGTACTCTTTTCCTATTCAAAGATCACTTAAAATAGAGGATGGTAAAGTTAAAATGGTCTGGGAAGAACACTTAAAAACAAGATCTCAAGATTTAGAACCTAGATACCATGATTCTGGACAATTTTACTGGGTAAAGTCGGATAAATTTTTAATTGAAAAAAAATTATTCACTCAAAATACAGGCTCATACATCATTTCACAATTGGAAGCTCAAGATATTGATACTGAAACCGACTGGAAGTTAGCAGAAATAAAATACAAATTGATGCTTGATGAAAAAAAGAATAATTTTTAG

Protein sequences of DBSCAN-SWA_2

>NZ_CP019388|2027045:2037281|2031117_2031540_+|WP_076619297.1|DBSCAN-SWA
MADVSYKRHIAKTITWRLVGTLDTILLSWLVTGDPLAGLKIGLAEITTKSVLYYLHERVWYKINLSKDGILLESRKRHIAKTFTWRFIGTLDTMTLAWIISGNPLAAMQIGFAEVITKMVLYYIHERAWYKINFGITKRK
>NZ_CP019388|2027045:2037281|2029472_2030330_+|WP_076619293.1|DBSCAN-SWA
MTPRILVTGSNGQLGTCIKDVDDNKFDIKYVSSSDLDITNNKEVESFFEQQKIDWCINCAAYTAVDKAESDYNSAFNVNVSGVKNLAEACKAYNVKLIHVSTDFVFDGEQNKPYKESDPTNPLSVYGDTKLKGEQEVSKALKEYFILRTSWLYSEHGANFLKTMLRLSKDKTQLGVVGDQIGTPTYAKDLAKAILLFIEKDISNYGIYHYSNNGVASWYDFAKAIFEIHKTNIQLNNISTAQFPTPAKRPRFSVLDKTKIETALRQNVPYWRDSLITAMQNIQNE
>NZ_CP019388|2027045:2037281|2027045_2028068_+|WP_076619288.1|DBSCAN-SWA
MNNKKSLLVTGGAGFIGSNFIIHTLKNNKEINIINLDKLTYAGELSNLEPIADSKNYQFVKGDICNEKLVESLFEEHKFTGVIHFAAESHVDNSILNPDAFIKTNIYGTFNLLNIAKRYWMQKPFLAKKGCKNNRFLHISTDEVYGALGKKGLFTEDTPYAPNSPYSASKASSDFIVRSYFHTYGLNVVTTNCSNNYGPKQHDEKLIPTIIRKAVNGEDIPIYGDGKNIRDWLYVKDHCEGIYLAFNKGKAGETYNIGGRNERDNLYIAHKICEILDEVRPKNSKYSDQITFVKDRPGHDFRYAINATKIENELGWKANENFETGILKTIKWYLNKYDKP
>NZ_CP019388|2027045:2037281|2028930_2029476_+|WP_076619291.1|DBSCAN-SWA
MIATKTNLKGCFIIEPQVFQDDRGYFFESFNQQTFNNLIGKPVNFVQDNESLSSRGVIRGLHFQEGEFAQAKLVRVIKGSALDVAVDIRKDSPTFGQHIAVELTEDNKKQLFVPRGFAHGFSVLSDTAIFSYKCDNFYNKNAEAGIIYNDQSLNIDWKIKPEEAQLSEKDIILPTLEAYFK
>NZ_CP019388|2027045:2037281|2034413_2035433_+|WP_076619305.1|DBSCAN-SWA
MFTLKNKSILITGGTGSLGKALTNHILNKHPEVKKLVIFSRDEQKQFQMAQEYPSDKFPQIRFFIGDVRDRERLERAFQHIDYVIHAAAMKHVHIAEYNPDECIKTNINGAENVVDACFKTNVERVVALSTDKACAPINLYGATKLTSDKLFIAANNIKGQNPIKFSVVRYGNVMGSNGSVIPFFINKKKEENRLPITDPNMTRFNISLQGGVDMVMHALEHAWGGELFVPKIPSYKIMDVAEAIGPHCEKPVIGIRPGEKVHEEMITASDSFYTYDLGKYYTILPATHQWSLDDFIETFDAKKVPQGFSYNSGDNSDWETIESLRALIKEHVDPTFEV
>NZ_CP019388|2027045:2037281|2030322_2031117_+|WP_076619295.1|DBSCAN-SWA
MNKLLQIAIKASLEAGKVIMQVYDTAFDVEIKDDKSPLTEADKKANDVINSFLIPTEIPIISEENKQTDYNVRKTWKTCWVVDPVDGTKEFIKRNGEFTVNIALVNDGKPVLGVIYVPAVKTIYFANVESNKAFKANLDSHNVTVETILKLAKPLQPKNNSSNKVEVVGSRSHMNEDTLNFVEDLRNEGKEVEIVSKGSSLKFCLVAEGNADVYPRYAPTMEWDTAAGQAICNAVGIKVISKETNQPLIYNKENLLNSYFLVSK
>NZ_CP019388|2027045:2037281|2031548_2032151_+|WP_076619299.1|DBSCAN-SWA
MKDNITPHNYQISVRDRRERNGHNSFLLWFTGLSGSGKSTIANVVEQKLFKEGIKTYTLDGDNMRKGINGDLTFSPEDRTENIRRIAEVANLMIDAGLVILAAFVSPYKKDRENIRSIVKDVNFVEIFVNTSVEECERRDVKGLYKKARAGEIKNMTGISAPYEAPENPDIEIRTENESVESAAQRIAEYITPKLKLNDE
>NZ_CP019388|2027045:2037281|2035429_2036584_+|WP_076619307.1|DBSCAN-SWA
MMNKPIIPYGRQYIDQNDIDTVIDTLTADFLTQGPKVIEFEEKFAKYIGSKYAVAVSNATAGLHIAVMALGLKPGERVITTPITFAASANCVRYCGGEVWFADIDSDTYTLSLESTKKLIESKPKGFFKGIIPVDFAGLPVNLEQFKALATEHDLWIIEDACHAPGGYFSDTKGVKQMCGNGKYADIGIFSFHPVKHIACGEGGMVTTNSKDLYDRLSRLRTHGITKDNMSENHGGWYYEMQELGYNYRLTDIQSALGITQLEKNNAGVRRRNEIAQNYKNAFYGKIKFQSLPEGTYNAHHLFVIEVENRKALYDYLREAGIYAQIHYIPVHTLPYYKSIGYEGADLGNSEAYYSKCISLPMYPTLTDEEQSFVIEKVLGFLNE
>NZ_CP019388|2027045:2037281|2032143_2033049_+|WP_076619301.1|DBSCAN-SWA
MSKYYLNYLDELESEAIFVLREVWAQFENPVILFSGGKDSILVTHLAKKAFYPAKIPFPLMHVDTGHNFPETIAFRDNIIKELGAQLIVGSVQESIDEGRVAEEKGKNATRNALQITTLLDAIETNKIDCAIGGGRRDEEKARAKERFFSHRDDFGQWDPKNQRPELWNIFNGKHFEGEHFRAFPISNWTEMDVWNYIKRENIAIPSLYFAHQREVVWRQDSWIPNSEFLVLEDHEEVVTKKIRFRTLGDITITGGVESDADTLEKIAAEVAGMRNTERGNRSDDKRSESAMEDRKRQGYF
>NZ_CP019388|2027045:2037281|2033115_2034369_+|WP_076619303.1|DBSCAN-SWA
MLDNNQLLRFTTAGSVDDGKSTLIGRLLYDSKSIFEDQLEAIENTSKKKGHDGVDLALFTDGLRDEREQGITIDVAYRYFTTPKRKFIIADTPGHIQYTRNMVTGASTANVATILIDARHGVIEQTKRHAFIASLLQIPHIIVCVNKMDLVDFSEEVFNNIVSEFEEISSKMLVKDVRFIPMSALLGDNVVNKSENMPWYQGAPMLHTLETMHISSDINKVDARFPVQTVIRPQRDGFIDYRGYAGRVASGILRKGDEVTVMPSGFTSKVKSINLFDKELDEAYAPMSVSITLEDDIDISRGDMIVRSNNKPEPSQDIEVMLCWLNNSPAKPRAKYTIKHTSNDQKAMIKEVVYKYDINTLERKSEDSDLAMNDIAKVKIRTTKPLMIDSYRENRATGSIILVDDATNETVAAGMIV
>NZ_CP019388|2027045:2037281|2028064_2028934_+|WP_076619290.1|DBSCAN-SWA
MKGIILAGGSGTRLHPLTLSVSKQLMPVYDKPMIYYPLSTLMYSGINEILIISTPKDLPLFKDLLGDGKKYGCEFEFAVQESPNGLAEAFIIGEEFIGEDKVALILGDNIFYGTGLSDLLQRNNNPDGGIIYAYRVYDPERYGVVDFDEKGQAISIEEKPKKPKSNFAVPGIYFYDNDVVDIAKSIKPSHRGELEITDVNKEYLRRNKLSVSILDRGTAWLDTGTFDSLMQASQFVEVIENRQGLKIGSIEAAAYEMGYISEEKFRALAKPLMKSGYGKNLLDLIKNKK
>NZ_CP019388|2027045:2037281|2036576_2037281_+|WP_076619309.1|DBSCAN-SWA
MSNLAIIPARGGSKRIPKKNIKSFLGKPIIAYSIEAALKSNCFEEVMVSTDDSEIAKIAVQYGAKVPFIRSHENANDFAVLADVISEVLERYASNNKKFKNICCLLPTAPFIDSEKLKEAYRIFMDKKFDSIFPILEYSFPIQRSLKIEDGKVKMVWEEHLKTRSQDLEPRYHDSGQFYWVKSDKFLIEKKLFTQNTGSYIISQLEAQDIDTETDWKLAEIKYKLMLDEKKNNF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076619288.1|2027045_2028068_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.1e-84	48.6
WP_076619290.1|2028064_2028934_+	glucose-1-phosphate thymidylyltransferase RfbA	H9NC64	Sphingomonas_phage	7.8e-100	64.0
WP_076619291.1|2028930_2029476_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A1D8EQH2	Escherichia_phage	4.2e-35	47.8
WP_076619293.1|2029472_2030330_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.9e-46	42.7
WP_076619295.1|2030322_2031117_+	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_076619297.1|2031117_2031540_+	DUF2061 domain-containing protein	NA	NA	NA	NA
WP_076619299.1|2031548_2032151_+	adenylyl-sulfate kinase	A0A2P1ELS9	Moumouvirus	3.0e-26	38.9
WP_076619301.1|2032143_2033049_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_076619303.1|2033115_2034369_+	sulfate adenylyltransferase subunit CysN	A0A1V0SGC3	Hokovirus	1.5e-35	27.1
WP_076619305.1|2034413_2035433_+	UDP-N-acetylglucosamine 4,6-dehydratase (inverting)	A0A1V0SAI8	Catovirus	1.2e-38	35.6
WP_076619307.1|2035429_2036584_+	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	A0A2P1ELT3	Moumouvirus	6.0e-31	32.5
WP_076619309.1|2036576_2037281_+	pseudaminic acid cytidylyltransferase	A0A1B1IVD3	uncultured_Mediterranean_phage	7.4e-08	29.9