CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019390	Brucella sp. 09RB8910 chromosome 1, complete sequence	3 crisprs	WYL,csa3	0	3	6	0
NZ_CP019391	Brucella sp. 09RB8910 chromosome 2, complete sequence	1 crisprs	DEDDh,cas3,csa3	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019390_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019390_1

310310-310422

Orphan

Consensus_repeat	Method
TGAACAAAGTCATATGACTT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP019390_1

>merge|NZ_CP019390|1|310310-310422|PILER-CR
TGAACAAAGTCATACGACTTTAAATTCCCCTTCCAAAGCAAATCAATTAAACAAAGTCATATGACTTGATTGGCGCACCCCATGGGGACGCGCTGAACGAAGTCATATGACTT

>NZ_CP019390|1|1|310310-310422|PILER-CR
TGAACAAAGTCATACGACTT	TAAATTCCCCTTCCAAAGCAAATCAAT
TAAACAAAGTCATATGACTT	GATTGGCGCACCCCATGGGGACGCGC
TGAACGAAGTCATATGACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019390.1\|WP_076770646.1\|307947_308496_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180356
NZ_CP019390.1\|WP_154146688.1\|310538_310814_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076770654.1\|311814_313140_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271177
NZ_CP019390.1\|WP_154146686.1\|309224_309380_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076770657.1\|316480_317185_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187602
NZ_CP019390.1\|WP_076770642.1\|305404_306529_-\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|372578
NZ_CP019390.1\|WP_076770650.1\|309603_310305_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224885
NZ_CP019390.1\|WP_076770653.1\|311320_311581_+\|DUF2312-domain-containing-protein	unknown	unknown	gnl\|CDD\|226273
NZ_CP019390.1\|WP_076770644.1\|306731_307463_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076770656.1\|314208_315882_+\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP019390.1\|WP_154146684.1\|308871_309219_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_154146690.1\|310810_311044_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076770652.1\|311036_311324_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076770647.1\|308526_308820_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076770658.1\|317257_318043_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP019390.1\|WP_154144636.1\|307459_307948_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076770649.1\|309372_309573_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP019390.1\|WP_076770655.1\|313253_313727_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_002963859.1\|316163_316319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_154146682.1\|306525_306735_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019390.1\|WP_076770646.1\|307947_308496_-\|hypothetical-protein	gnl\|CDD\|180356	PRK06030, PRK06030, hypothetical protein; Provisional.	2.94792e-05
NZ_CP019390.1\|WP_076770657.1\|316480_317185_+\|SDR-family-oxidoreductase	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	5.13245e-95
NZ_CP019390.1\|WP_076770654.1\|311814_313140_+\|hypothetical-protein	gnl\|CDD\|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	9.41289e-05
NZ_CP019390.1\|WP_076770658.1\|317257_318043_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.30684e-06
NZ_CP019390.1\|WP_076770656.1\|314208_315882_+\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	0
NZ_CP019390.1\|WP_076770642.1\|305404_306529_-\|toprim-domain-containing-protein	gnl\|CDD\|372578	pfam13362, Toprim_3, Toprim domain. The toprim domain is found in a wide variety of enzymes involved in nucleic acid manipulation.	2.39922e-10
NZ_CP019390.1\|WP_076770650.1\|309603_310305_+\|hypothetical-protein	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	7.95968e-08
NZ_CP019390.1\|WP_076770653.1\|311320_311581_+\|DUF2312-domain-containing-protein	gnl\|CDD\|226273	COG3750, COG3750, Uncharacterized protein conserved in bacteria [Function unknown].	4.26916e-36
NZ_CP019390.1\|WP_076770649.1\|309372_309573_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.02332e-05

>NZ_CP019390.1|WP_076770650.1|309603_310305_+|hypothetical-protein
MRINSAIMRIVKVGMFSSCVSPAHNFMRMEQGKKEQQDWVKAVLSHLGITATELARRTGVAPSTIHKPLNDPEFPGMISSRTIHKIAEAAGLRPMEFPGRARAFNDKETEPYVFDEPEANPSFERAIRDLIAQRNGRSAWRIRSYALEISGILPGDVLIVDQSPQPKPNDIVAVELKDWSSGRTENVFRLYLPPYVITNSLREGAQKPLPVDGSDVSIRGVVDVVMRQPRVAH
>NZ_CP019390.1|WP_076770649.1|309372_309573_-|helix-turn-helix-transcriptional-regulator
MRTFDQIEQLRKHYKITRKQLYERAGIHKETWRRTAQSKTSPNVKTLQDLSEAIDTLISERGDAHA
>NZ_CP019390.1|WP_154146686.1|309224_309380_-|hypothetical-protein
MLDLVVMISGMAMIALGCGWMADRKLWVGLSCFLYAALVFVVEVFVFAVKW
>NZ_CP019390.1|WP_154146684.1|308871_309219_-|hypothetical-protein
MTERLTILHSEKRTEAPKSLENIRVVLQHEDNSRISVATMAADTSLATAEVTFHLSESVWIAERIIAGDMRVATRPGLARILAGAVVALAKIGCAAGALEEVTDVEEVSDDKQSD
>NZ_CP019390.1|WP_076770647.1|308526_308820_+|hypothetical-protein
MNIFNRLQGFKVSHNLTNEEYDRLLMVVGGAGMAAKAVLTVSMAGLPITVDSAVETCRHWMDPNSPATPVFLEAVGAHVNEMLATAEAISPPSKGRA
>NZ_CP019390.1|WP_076770646.1|307947_308496_-|hypothetical-protein
MTADLAIELQKIEEIRRENGIAQYHVERAAMLCNGYYSLLITGAKRPRMGTLNALRLALRRLIVTPEADTSPQSAFCNMAIRAAIALLCEARGLNAEKIQNSIASKRATQSPEWLEAARVRRDAWALVSNAFGISGSDLARAAGVSKAAISLALRAVEDARDDKEFDREMERLERALTGGGW
>NZ_CP019390.1|WP_154144636.1|307459_307948_-|hypothetical-protein
MTDEKNVLPFKVSEHQREDRNFYSTGLDGKLKTVSPDELVKEKVPSWPFLFLAINPPPQLGDKGRKERAASIISLTCERTPSASPSKFGLVRDTQLDSASKAASSDISLPAIRHVRTALFAYVATATVSMKWLRSFWSILCTISSLFVGLCSCRESDRRGKR
>NZ_CP019390.1|WP_076770644.1|306731_307463_-|hypothetical-protein
MNRRLISTAVRARRFEPATSLDFFPTAPWATRAFCEHVMPVVSPYGDRFKATAWDPACGMLHMSRVLEEYFERSVYASDIFDYGQGVSTFDFLDRSVAPLSVDWIITNPPFKCGAQFVERALELAGVGVAMLVRTQFLETVDRYRTLFQKRPADLIAQFVERVPMHRGRWVVNGKTATSYCWLVWLRHREHARSRAAVHFGQGFIWIPPCRQKLTRPDDVLRFGGCVDIPKRHKAWRPERMAA
>NZ_CP019390.1|WP_154146682.1|306525_306735_-|hypothetical-protein
MKKTVQLSAKVGMCEGLGAGFAIDDDAWEEFAQDLVNFGTAVFSADTVDGFVRLSIENDFWKRDPEAKR
>NZ_CP019390.1|WP_076770642.1|305404_306529_-|toprim-domain-containing-protein
MNGRGDLQEIKEMLKDRAQDVCEKLLPNGRRDGNLYVSHDPVQGDYDHKPALKVRLRGNIGGWEQFRGGAEGARKDIIGLVEYVLRTDTKGALAWARDFLGLRSMSRQEREAMQMAASAKAKKRQKEDHDRRLWRIKKADELFSQRTMQIHPDRLDPPALRHALSYFRGRDIPLEEVTHLPAETFRFSPQTEWWSGAKFQTEGARRFKVSPGPMFPAVHSAMRSQHGIVTACHCTFLDPLEPVKAPVEPPKLIFGEASGAVVEVSYGQFGDPFWLSRQAGLVIICEGVETALSLAIAAPEARVWAGGSITNMGNAPVWLDCVGAIILARDNNHGNPTAQKQIQQTIDKLESWGKPLTVINSHLGDDFNDLMKGE
>NZ_CP019390.1|WP_154146688.1|310538_310814_+|hypothetical-protein
MLSIETASIEEVADAIGRSEIWLKRNWNKFNAKHGFPRPIPGSDWKWPRRAVELWLIAGGVIMRAANSNEASADLISLQRQAHHERYGVVS
>NZ_CP019390.1|WP_154146690.1|310810_311044_+|hypothetical-protein
MTAKGSISLNHLEIDEHFAMSDYEPYHDYEPDDDFSDELDTGDACGRWINGQLGEHCTLAGTEFCDWECPYSGGGNE
>NZ_CP019390.1|WP_076770652.1|311036_311324_+|hypothetical-protein
MNSTSQPALIDPRELTPTERKLLREVATYKFYRRRNGWAIPGQGNKVSLKSVDNLYRKHLISDRSDCLRLTGAGQMVLAVMQERERAKTERKAAQ
>NZ_CP019390.1|WP_076770653.1|311320_311581_+|DUF2312-domain-containing-protein
MSDDITSEAQTIAVGQLRAFIERIERLQEEKKTIGDDINEVYAELKGSGFDSKVVRTIIRLRKKEDHERQEEDAILQLYMDALGMS
>NZ_CP019390.1|WP_076770654.1|311814_313140_+|hypothetical-protein
MAKKANPHPHVSWRDGRPRFQPGKELRAMGYSGKDLRHEDGRWFTRGEAVDWSTNFQQELAGKRKPAPSVPRTAPVRYAGYTVENLIADWTNPKRNPKWKLNGTRSYSPSTMNDYRDKMNVLMQHDGELWVSDVRSLDRPTCRNLFDSLWSQRGLATAKGVLLTLSSAISWGMLRGHVKLLDNPATKLQMESPEPRVRFGTRPEILALIAAADRIGRPEIGDMIVLAVWSGQRQGDRRELIDKGLMNNRRIFKQSKTGEIVAVMQAPELERRLEASKKRREAAKIKDPRVILDEKLWKSFSKRHYHEIFSKVRDAAIIGVVDVSATQKNFPSVKAMNVALKRAYEKHRKGEAVYDVRIVYEISPLISLHDLQDLDFRDTSVTWMALAGATIPEIISVTGHTAESATRILRHYLARHPEMADSAIRKMVSWYEADGETEIGY
>NZ_CP019390.1|WP_076770655.1|313253_313727_+|hypothetical-protein
MKQHCVIETEDIGRGKVRLHFHIDIQIDQLQPLPREIIDDAFTCLRHLLMFKPDGETPVRRMIESALNDNEDSRLLLRLAGIRVVSDFATNEGFIVASAGVGVNRLFDGSAWGEGLHRHALSSLPGARPTGPLNFAEGKAFRGTFLPARLIYDAVHY
>NZ_CP019390.1|WP_076770656.1|314208_315882_+|L-lactate-permease
MPWNQVYDPLGSMFWSTLLAALPIVVLLGGIGIFHIKAHIAAILGLITALLIAVIGFGMPADMAGATAVYGAAYGLLPIGWIILNVIFLYRLTEQTGQFNILRDSIAGITPDRRLQLLFIAFSFGAFFEGAAGFGTPVAVTAAMLMGLGFAPLPAAGLSLIANTAPVAYGALGTPVIALSAVTGIDLLQLSGMIGHQLPFFSAIVPFWLIWAFAGRKGMIEVWPALLVAGVSFAVPQYVVSNFHGPWLVDVIAAICSMAALAAFLRFWQPRRIWTSTGKEGEEANAPVQPRHSHSTGAVFRAWLPWLVLSVFVFLWGTPQIRTWLDSLWIWKMQVPHLHNLVFKVPPVVAEAHSEAAIFTLNLLSATGTGILLSAVVAGFILGFNPLKLVKEYFKTAYVVRFSLITISAMLALGYVTRYSGTDATLGLAFAQTGWVYPFFGAMLGWLGVALTGSDTASNVLFGGLQKITAEQLGLSPVLMAAANSSGGVMGKMIDAQSIVVASTATQWYGHESKILRYVFFHSIALACLVGVLVLAQAYVPPFTSLVPAETLPLVAH
>NZ_CP019390.1|WP_002963859.1|316163_316319_+|hypothetical-protein
MAIQTVSDELYRRHEREWAEFRNAVEASETNQKQQGQASGKTSCDSKTGNQ
>NZ_CP019390.1|WP_076770657.1|316480_317185_+|SDR-family-oxidoreductase
MTIQKVAIITAGGSGMGAASARRLAQDGFAVAILSSSGKGEALAKELGGIGVTGSNQSNDDLQKLVDQALEKWGRIDVLVNSAGHGPRAPILEITDEDWHKGMDTYFLNAVRPARLVVPAMQKQKSGVIINISTAWAFEPSAMFPTSAVFRAGLASFTKIFADTYAAENIRMNNVLPGWIDSLPATEERRESVPMQRYGKSEEIAATVSFLASDGAAYITGQNLRVDGGLTRSV
>NZ_CP019390.1|WP_076770658.1|317257_318043_+|hypothetical-protein
MAARKRSSSSRSPKRSSRRKSGSGSSTPILALGAILALGAFSLWSTAQHKSPQAAFSALFQRPAPKPAPAATAKAENKPAPGKTADTKAPARDYAAAVGPVPRPAAPVAPAPQKPVQTAAVAAPKPPRPSGSVVASVTPTAPHAMPPRGVNTPANSPSVIYARAKLTIHKNAWDRSPAIATIEKGREMRSYGKTGRWHRVVVPSTNIIGWVHEDQLIGGRNKPDSATLITGSVAKKAPSPAPTPAHEQSHILPPKAVGAKK

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Crispr_ID: NZ_CP019390_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019390_2

1044062-1044152

Orphan

Consensus_repeat	Method
GCTTCGCACTTTTGCTGGAAATGCTCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019390_2

>merge|NZ_CP019390|2|1044062-1044152|CRISPRCasFinder
GCTTCGCACTTTTGCTGGAAATGCTCTAACTCTTTGTTTTTACGCATTATCCAACGCAAAACTGCTTCGCACTTTTGCTGGAAATGCTCTA

>NZ_CP019390|2|1|1044062-1044152|CRISPRCasFinder
GCTTCGCACTTTTGCTGGAAATGCTCTA	ACTCTTTGTTTTTACGCATTATCCAACGCAAAACT
GCTTCGCACTTTTGCTGGAAATGCTCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019390.1\|WP_008935091.1\|1034567_1035590_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225370
NZ_CP019390.1\|WP_076771021.1\|1049584_1051183_-\|apolipoprotein-N-acyltransferase	unknown	unknown	gnl\|CDD\|234721
NZ_CP019390.1\|WP_002965230.1\|1038129_1038399_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP019390.1\|WP_004684581.1\|1046822_1047524_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|223298
NZ_CP019390.1\|WP_008935088.1\|1043282_1043936_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|236401
NZ_CP019390.1\|WP_076771022.1\|1054162_1055566_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|237673
NZ_CP019390.1\|WP_002968051.1\|1031781_1032300_+\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	unknown	unknown	gnl\|CDD\|179953
NZ_CP019390.1\|WP_179947192.1\|1044330_1046655_-\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP019390.1\|WP_076771019.1\|1038569_1039544_-\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235442
NZ_CP019390.1\|WP_042972263.1\|1047532_1048798_-\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NZ_CP019390.1\|WP_002968046.1\|1051179_1052298_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP019390.1\|WP_002967046.1\|1055623_1056427_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP019390.1\|WP_076771890.1\|1039547_1040000_-\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP019390.1\|WP_002965233.1\|1033701_1034520_+\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|180596
NZ_CP019390.1\|WP_059243166.1\|1032463_1033687_+\|beta-ketoacyl-ACP-synthase-I	unknown	unknown	gnl\|CDD\|181184
NZ_CP019390.1\|WP_002965221.1\|1049024_1049438_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224314
NZ_CP019390.1\|WP_002965231.1\|1035701_1037846_-\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP019390.1\|WP_156884120.1\|1052300_1052807_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|223396
NZ_CP019390.1\|WP_002968045.1\|1052942_1054004_-\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224616
NZ_CP019390.1\|WP_076771020.1\|1040265_1043145_-\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401

Protein	Function_ID	Function_description	E-value
NZ_CP019390.1\|WP_008935091.1\|1034567_1035590_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225370	COG2813, RsmC, 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis].	1.58078e-112
NZ_CP019390.1\|WP_076771021.1\|1049584_1051183_-\|apolipoprotein-N-acyltransferase	gnl\|CDD\|234721	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed.	7.72574e-170
NZ_CP019390.1\|WP_002965230.1\|1038129_1038399_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	2.67536e-54
NZ_CP019390.1\|WP_004684581.1\|1046822_1047524_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|223298	COG0220, COG0220, Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only].	4.7375e-78
NZ_CP019390.1\|WP_008935088.1\|1043282_1043936_-\|RNA-binding-protein	gnl\|CDD\|236401	PRK09190, PRK09190, RNA-binding protein.	1.13257e-93
NZ_CP019390.1\|WP_076771022.1\|1054162_1055566_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|237673	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_CP019390.1\|WP_002968051.1\|1031781_1032300_+\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	gnl\|CDD\|179953	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase.	3.68226e-121
NZ_CP019390.1\|WP_179947192.1\|1044330_1046655_-\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP019390.1\|WP_076771019.1\|1038569_1039544_-\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235442	PRK05389, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP019390.1\|WP_042972263.1\|1047532_1048798_-\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP019390.1\|WP_002968046.1\|1051179_1052298_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	2.61955e-83
NZ_CP019390.1\|WP_002967046.1\|1055623_1056427_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.83965e-36
NZ_CP019390.1\|WP_076771890.1\|1039547_1040000_-\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	3.92613e-44
NZ_CP019390.1\|WP_002965233.1\|1033701_1034520_+\|enoyl-ACP-reductase-FabI	gnl\|CDD\|180596	PRK06505, PRK06505, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP019390.1\|WP_059243166.1\|1032463_1033687_+\|beta-ketoacyl-ACP-synthase-I	gnl\|CDD\|181184	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I.	0
NZ_CP019390.1\|WP_002965221.1\|1049024_1049438_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224314	COG1396, HipB, Predicted transcriptional regulators [Transcription].	6.74897e-15
NZ_CP019390.1\|WP_002965231.1\|1035701_1037846_-\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP019390.1\|WP_156884120.1\|1052300_1052807_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|223396	COG0319, COG0319, Predicted metal-dependent hydrolase [General function prediction only].	1.0166e-62
NZ_CP019390.1\|WP_002968045.1\|1052942_1054004_-\|PhoH-family-protein	gnl\|CDD\|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	1.51653e-157
NZ_CP019390.1\|WP_076771020.1\|1040265_1043145_-\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0

>NZ_CP019390.1|WP_008935088.1|1043282_1043936_-|RNA-binding-protein
MMVRVRTKQRFRVGQQEMNDRTCIVTRESGSADDMIRFVAGPDGSVVPDLKRTLPGRGCWVKAERRLVDEAVKRKLFARALKEGVTPQADLGALVDQLLTKSALGSLALARKAGAVVTGSTKVDQAIRTGAAAMVLHAREAAADGVRKLDQARRAVVHLEGPEIPSFTLFSGEEMDLAFGGGNVIHAAVLEGKAAAGFVKRALLLHRYRGESASNLD
>NZ_CP019390.1|WP_076771020.1|1040265_1043145_-|translation-initiation-factor-IF-2
MSDKTNDDKTLSVNPKKTLTLKRPGVEQSTVRQNFSHGRTKAVVVETKKRKFSRPDEKPEVEAAAAPKPAAPAAAPQQAPSSAPVSASAAQASAPQPAPVKAPATKAPAAPSAPVTKPHVAQQRPVHQRPGGQQAQRPRPADRSGMVLNTLSRSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEREESARRQAEEEARLKAEAEARRKAEEEAAKRMPQPEARSERRDDARPAPYGARPQQAGRPQGGRPQPAGRPQQGSPRPAPIIADAAPIAGKPLPQSQLRKPGQSDDDDDRRSGAARRGVAAKPEVRAPKVVKGEDDRRRGKLTLTSNLEEEGRSRSLSAMRRRQEKFKRSQMQETREKISREVTIPETITLQELAQRMAERSVDIIKYLMKQGQMMKPGDVIDADTAQLIAEEFGHTVKRVAESDVEEGIFDVADNESAMVSRPPVVTIMGHVDHGKTSLLDAIRHANVVSGEAGGITQHIGAYQVVQNGQKITFIDTPGHAAFTAMRARGAQATDIAILVVAADDSVMPQTIESINHAKAAGVPIIVAINKIDKPAADPQKVRTALLQHEVFVESMGGEVLDVEVSAKNKINLDKLLDAVLLQAEMLDLKADPDRTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVNDRGEHVKEAGPAMPVEILGLQGTPQAGDRFAVVANEAKAREIAEYRQRLARDKAVARQSGARGSLEQMMNQLQVSGTKEFPLVIKGDVQGSIEAITNALDKLGTDEVRARIVHSGAGGITESDVSLAEASNAAIIGFNVRANKQARDSAEQQGIEIRYYNIIYDLIDDVKAAMSGLLSPERRETFLGNAEILEVFNITKVGKVAGCRVTEGKVERGAGVRLIRDNVVIHEGKLKTLKRFKDEVAEVPSGQECGMAFENYDDIRAGDVIEAFRVEHVSRTL
>NZ_CP019390.1|WP_076771890.1|1039547_1040000_-|30S-ribosome-binding-factor-RbfA
MARSHDMKGSGGLSQRQLRVGEQVRHALAQVLQRGEIRDDLIERTVISVSEVRMSPDLKIATCFITPLGSADPQAVIKALASHAKFIRGRVAPSLAQMKYMPEFRFRPDTSFDNFSKIDALLRSPEVARDLSHDDDEDGGADEAPRNGDE
>NZ_CP019390.1|WP_076771019.1|1038569_1039544_-|tRNA-pseudouridine(55)-synthase-TruB
MARRGKKKGRPISGWVIFDKPKGMGSTEAVSKIKWLFSAEKAGHAGTLDPLASGMLPIALGEATKTVPYVMDGTKVYRFTVTWGEERSTDDLEGQPTKTSDKRPSREEVEALLPDYTGVISQVPPQFSAIKIDGERAYDLAREGETVEIPAREVEIDRLEIVGFPDADRTEFEVECSKGTYVRSLARDMGRDLGCYGHISDLRRVEVAPFTDEDMVTLARLEAVWPPLPPKDEDGNVIEPAPWRDFSALDALVIDTGAALDCLPQVPLSDDQAQRVRLGNPVILRGRDAPLEADEACVTTRGKLLAIGYIEHGQFKPKRVFTAG
>NZ_CP019390.1|WP_002965230.1|1038129_1038399_-|30S-ribosomal-protein-S15
MSITAERKQALIKEYATKEGDTGSPEVQVAVLSERIANLTEHFKGHKNDNHSRRGLLKLVSQRRRLLDYVKGVDHARYQALITRLGLRR
>NZ_CP019390.1|WP_002965231.1|1035701_1037846_-|polyribonucleotide-nucleotidyltransferase
MFNTHKVEIEWGGRPLTLETGKIARQADGAVLATYGETAVLATVVSAKEPKPGQDFFPLTVNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFVDGYKNDTQVVITVLQHDLENNPDILSMVAASAALTISGVPFMGPISGARVGYIDGEYVLNPNIDEMPESKLDLVVAGTSEAVLMVESEAQELPEDVMLGAVMFGHKSFQPVIDAIIKLAEVAAKEPRDFQPEDLSELEAKVLAVVENDLREAYKITEKQARYAAVDAAKAKAKEHFFPEGVEETEMSAEQFATIFKHLQAKIVRWNILDTGNRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQMIDALTGTYKESFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAEQFPYTIRAVSEITESNGSSSMATVCGTSLALMDAGVPIVRPVAGIAMGLIKEGERFAVLSDILGDEDHLGDMDFKVAGTEFGITSLQMDIKIDGITEEIMKVALEQAKGGRVHILGEMAKAISSSRAELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIASSNGKEIEAAKKWIHSIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLAADRVAKTTDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKEIVAEKKKEEVDAE
>NZ_CP019390.1|WP_008935091.1|1034567_1035590_-|class-I-SAM-dependent-methyltransferase
MTTPAQKTLFLPFEQGILDMPDPGQSFLACGLAADRLLEPEWKQALTCLQPWRPDWLALQKEGFHAEPRLATDRNFSGGLLLLGKHRGRNEAWFAQLLARVQPGGWIVVSGDKKLGIDSFRKWAGNIAEISDRMSKNHAVVFWLRRPDDLDEAFIADLKPLAADIEGGFRTEPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGNLERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLGQSFIAAAASRLKPGGRLLVVANRQLPYELTLKGLFKTVTLLEEAEGFKIFDAKK
>NZ_CP019390.1|WP_002965233.1|1033701_1034520_+|enoyl-ACP-reductase-FabI
MEGLMQGKRGLIMGVANNHSLAWGIAKQLAAQGAELAFTYQGDALGKRVKPLAEQVGSDFVLPCDVEDIATVDAVFEEIEKKWGGLDFLVHAIGFSDKTELKGRYADVTTRENFSRTMVISAYSFTEVAQRAEKLMKDGGSILTLTYGGSTRTIPNYNVMGVAKAALEAMVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQRRNSPLRRTVDIDDVGKSAVYLLSDLSSGVTGEIHFVDSGYNIVSMPTLEELKSSDSERGE
>NZ_CP019390.1|WP_059243166.1|1032463_1033687_+|beta-ketoacyl-ACP-synthase-I
MRRVVVTGMGIVSSIGNNTEEVTASLREAKSGISRAEEYAELGFRCQVHGAPDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALSTVTSKIDYINPHATSTPAGDAPEIEAIRQIFGAGDACPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRYQG
>NZ_CP019390.1|WP_002968051.1|1031781_1032300_+|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA
MAEQKSSYGYEELLACGRGEMFGPGNAQLPLPPMLMIHRITEISETGGAFDKGYIRAEYDVRPDDWYFPCHFQGNPIMPGCLGLDGMWQLTGFFLGWLGEPGRGMALSTGEVKFKGMVRPHTKLLEYGIDFKRVMRGRLVLGTADGWLKADGELIYQATDLRVGLSKEGSAQ
>NZ_CP019390.1|WP_179947192.1|1044330_1046655_-|transcription-termination/antitermination-protein-NusA
MTEQVQANETETPVAVADERIIRETGIDAKVAGIVEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFSDWAGHIAKVETSIVHEGRKKFRGRIVVGEADSVTIESDQISYGNEPVVRIPFDLISDARLVLTDDLIRDALRKDKALREGRIPGDDLGQSRKKPHLPKRKRRNKFQASAQEKAGCDTKERPMAVSANRLELLQIADAVAREKSIDREIVLAAMADAIQKAARSRYGQESNIRADINAKSGEIKLQRLLEVVENVEDYATQISLFMARDRNPDAQVGDFIADQLPPMDFGRIAAQSAKQVIVQKVREAERDRQYDEYKDRVGEIVNGTVKRVEYGNVIVDLGRGEAIVRRDELIPREAFRYGDRIRAYVYDVRREQRGPQIFLSRTHPQFMAKLFTMEVPEIYDGIIEIKSVARDPGSRAKIAVVSRDASIDPVGACVGMRGSRVQAVVAELQGEKIDIIPWSPDAASFIVNALQPAEVAKVVLDEDAERIEVVVPNDQLSLAIGRRGQNVRLASQLTGWDIDILTEDEESERRQKEFAERSNLFMEALNVDEMVGQVLASEGFASVEELAYVDAGEISSIDGFDEDTAGEIQDRAREYLERIEAEQDARRKELGVADELRELPGMTTAMLVAVGEDGVKTMEDFAGYAVDDLVGWRERKDGDTINHSGVLTPFDLSRVDAEQMVLAARLKAGWITEEELAAASEDVEAEEAGDEEAAS
>NZ_CP019390.1|WP_004684581.1|1046822_1047524_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MIDENHPMRAAGNFFGRRHGKPLRPHQSNLFEDLLPRLKLDLATPAPQDLRSLFEAPVETVRMEIGFGGGEHLHHESGRYPQSGFIGVEPFINGMAKMLAALDQAPRPNLRLYDEDATAVLDWLPDASLAGIDLFYPDPWHKRRHWKRRFVSDANLDRFARVLKPGAKFRFASDIEHYVNWTLQHCRRHAAFDWQAESPADWNDAYEGWPGTRYEAKAFREGRRAAYLTFIRR
>NZ_CP019390.1|WP_042972263.1|1047532_1048798_-|methionine-adenosyltransferase
MSRSSYLFTSESVSEGHPDKVCDRISDEIVDMIYKEARRTGVDPWSVRIACETLATTNRVVIAGEVRVPETFLKKNKDGSIAHDAAGHPLINPSRFRSAARKAIREIGYEQDGFNWRTVKVDVLLHPQSADIAQGVDNAADRQGEEGAGDQGIMFGYACRETPDLMPAPIYYSHKILEKLAEARHKGEGDAGKLGPDAKSQVTVRYENGKAAEVTQIVLSTQHLDASWDSRKVRSVVEPYIREALGDLPIAENCNWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNVVAAGLADRCTIQLSYAIGVAQPLSVYVDLHGTGKVAESAVEDALRKVMDLSPTGIRKHLDLNKPIYAKTSSYGHFGRKPGRDGSFSWEKTDLIKALKAAVSA
>NZ_CP019390.1|WP_002965221.1|1049024_1049438_-|helix-turn-helix-transcriptional-regulator
MIENKKKPNPIDMHVGSRIRLRRNMLGLSQEKLGENLGITFQQIQKYEKGTNRVGASRLQAISSILNVPVSFFFEDAPGSGSSGGDGFAEDNEATYVVDFLNSNEGVQLTRAFTKISDPKVRRKIIDLVKSLAADAE
>NZ_CP019390.1|WP_076771021.1|1049584_1051183_-|apolipoprotein-N-acyltransferase
MIARLAGRIILLSGWRRALAAFLSGAFATLTQPPFDIFVAGFVSFPILVWLIDGAIARTDAGPLRRLLPAAKVGWWFGFGYFVSGLWWIGTALLVDADQFAWALPLAVLGLPAFLALFYAFAAMIARLLWSDGLGRILALAFGFALAEWLRTFIFTGFPWNLIGYAAMPVPLLMQSVAVLGLVGMSALAVFVFAAPALLTGGHFARTGIGLAIFLALAHVGFGAWTLSRAPAIVDENGPLAVRIVQPSIAQAMKWDNAERRAIFDKLVGLTEEAPAEGKPRPDVIVWPETAIPYILESTPQALAHIGDALQEGQVLLAGAVREEKGADGGEPRYYNSIYTIDDRGRIKGTADKVHLVPFGEYLPFESFLRGLGLQEVVEMPGGFTAGTIRHALAVKDGRSFLPLICYEAIFPDELGYEGARASAIINVTNDAWYGDTPGPYQHFRQAQLRAVEQGLPLIRAANNGLSAIVDTYGRITGSLALDAVGVVDSYLPSPRDPFWGRPPGWIQTVLILLTLLAASVGLILYSRRRFH
>NZ_CP019390.1|WP_002968046.1|1051179_1052298_-|HlyC/CorC-family-transporter
MAEQTLHPPSAGDNRGETQDSEGQSTQRSSVTEKRSLLSNIFPFMRARQASSLREDLADALSSATSEDGAAFSPEEKAMLHNILRLREIRVEDVMIPRADVEAVEITTPLWEVLELFEKSGHSRMPVYAETLDDPRGMIHIRDVLNYITRQARQKARRRTTAKSAATEVAPKFDMSRIDLAKTIGELNLMRKVLFVPPSMMASGLMARMQASHIQMALVIDEYGGTDGLVSLEDIVEMVVGDIEDEHDDEEIMIAEDADGVFVVDARADLEELAARIGPGFAVGEHGEDVDTVGGLIFSVLGRIPVRGEVVQAIPGYEFHVLEVDPRRVKKVRIVPLSAADRRRQQRAVVSARPEDHAADAAHAAQNSKEAG
>NZ_CP019390.1|WP_156884120.1|1052300_1052807_-|rRNA-maturation-RNase-YbeY
MSDNAIHIDIMIEAGNWPDEASLESLVSKSVAAAWNSLGLKSATSELSVVFTDDASIQVLNGEWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVEREAKEEGKPIENHLSHLVVHGFLHLLGYDHETDEEAEVMEAREREILHALAIPDPYAVSDEDINND
>NZ_CP019390.1|WP_002968045.1|1052942_1054004_-|PhoH-family-protein
MSATEKLKSAKPTNQTQKSPTTGASDMAHIVLTFDNNRLASALYGQFDENLARIEQKLGVDVRSKGNQLSIRGEPTATEQARRALDHLYETLQKGHELTVSDVDGALRMAIAADDQLTLPTMENKGKLSAAQISTRKKTIFARTPTQDAYMRALDRSELVFGVGPAGTGKTYLAVAHAAMLLERGLVERIILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDMMPAEKVERAITAGVIEIAPLAFMRGRTLAHSAVILDEAQNTTSMQMKMFLTRLGEGSRMIVTGDPSQIDLPPGQKSGLVEALRVLDDVEGVIKVRFTEKDVVRHPLVAAIVGAYDRDGKQHAGPE
>NZ_CP019390.1|WP_076771022.1|1054162_1055566_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MSDDTTQIEPAMAQETSPRANTRKVFVKTYGCQMNVYDSQRMADSLAAEGYVATDTPDDADLVLLNTCHIREKASEKLYSALGRLRKMKDARAADGKELTIGVAGCVAQAEGQEILRRAPNVDLVIGPQTYHRLPNALARVRGGEKVVETDYAIEDKFEHLPAPRREETRKRGVSAFLTVQEGCDKFCTFCVVPYTRGSEVSRSVKQIVAEAERLADSGVRELTLLGQNVNAWHGEGEDGREWGLGELLFRLARIPGIARLRYTTSHPRDMDDSLIAAHRDLRQLMPYLHLPVQSGSDRILKAMNRRHKADEYLRLIERIRDVRPDMALSGDFIVGFPGETDQDFEDTMQLVREVHYAQAYSFKYSPRPGTPGADLDDHVEEAVKDERLQRLQALLSAQQYAFQDSMIGRAMDVLLEKPGREAGQMVGRSPWLLPVIIDDNKDRVGDIIHVKIVSTGTNSLIAQKLA
>NZ_CP019390.1|WP_002967046.1|1055623_1056427_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MIGTIRIFLVVAAMVALSLSLIPFQYLFLKLKNGWKRRLPNFFHRIVARLFGFRIRTVGKLHEGCPLLLVSNHTSWSDIVVLSAVGQVSFIAKSEVRDWPVFGMFAVLQRTVFVERARRGKTVHQTSEIANRLIAGDAMVLFAEGTTSDGNRVLPFKTALFGAAHAAIREAGVAEVAVQPVAIAYTRVHGMAMGRYFRPLVSWPGDVELMPHLKGILREGAIDVEVRFGEPVFVTAETDRKALARTMENRVRALLQSALLGREIPEA

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Crispr_ID: NZ_CP019390_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019390_3

1354302-1354540

Orphan

Consensus_repeat	Method
GTTGCCGACAACAAGACTGCCATTGGCCAGAACAGTGGCCGGATCGACAC	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP019390_3

>merge|NZ_CP019390|3|1354302-1354540|PILER-CR
GTTGCCGATAACAAGACTGCCATTGGCCAGAATAGTGGCCGGATCGACACGAATGCCAAGGGCGTTGCTGACAACCGGGCTGCCATTGGCCAGAACAGTGGCCGGATCGACGCCAATGCCAAGGGCGTTGCCGACAACAAGACTGCCATTGGCCGGAACAGTGGCCGGATCGACGCCAATGCCAAAGGTGTTGCCGACAACAAGACTGCCATTGGCCAGAATAGTGGCCGGATCGACAC

>NZ_CP019390|3|2|1354302-1354540|PILER-CR
GTTGCCGATAACAAGACTGCCATTGGCCAGAATAGTGGCCGGATCGACAC	GAATGCCAAGGGC
GTTGCTGACAACCGGGCTGCCATTGGCCAGAACAGTGGCCGGATCGACGC	CAATGCCAAGGGC
GTTGCCGACAACAAGACTGCCATTGGCCGGAACAGTGGCCGGATCGACGC	CAATGCCAAAGGT
GTTGCCGACAACAAGACTGCCATTGGCCAGAATAGTGGCCGGATCGACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019390.1\|WP_076771170.1\|1351350_1351779_+\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
NZ_CP019390.1\|WP_076771173.1\|1358222_1359506_+\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP019390.1\|WP_070997100.1\|1359505_1360180_+\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP019390.1\|WP_076771174.1\|1360732_1361257_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|234634
NZ_CP019390.1\|WP_004688741.1\|1363724_1365053_+\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NZ_CP019390.1\|WP_076771175.1\|1361374_1362274_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076771171.1\|1352898_1353456_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP019390.1\|WP_002972331.1\|1360342_1360714_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|223870
NZ_CP019390.1\|WP_076771168.1\|1348937_1349612_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|377070
NZ_CP019390.1\|WP_004688740.1\|1365270_1365807_+\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
NZ_CP019390.1\|WP_076771165.1\|1334058_1336014_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|223810
NZ_CP019390.1\|WP_002964927.1\|1351804_1352074_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_CP019390.1\|WP_083699653.1\|1354889_1355768_+\|YadA-like-family-protein	unknown	unknown	gnl\|CDD\|377158
NZ_CP019390.1\|WP_179947168.1\|1346331_1346826_-\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NZ_CP019390.1\|WP_076771941.1\|1347012_1348941_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|369778
NZ_CP019390.1\|WP_009364205.1\|1356023_1357049_+\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237048
NZ_CP019390.1\|WP_076771944.1\|1352194_1352845_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP019390.1\|WP_076771166.1\|1344048_1344723_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019390.1\|WP_076771172.1\|1357076_1358213_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP019390.1\|WP_076771169.1\|1349611_1349950_+\|AzlD-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019390.1\|WP_076771170.1\|1351350_1351779_+\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	7.69398e-49
NZ_CP019390.1\|WP_076771173.1\|1358222_1359506_+\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP019390.1\|WP_070997100.1\|1359505_1360180_+\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	2.11868e-76
NZ_CP019390.1\|WP_076771174.1\|1360732_1361257_+\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|234634	PRK00103, PRK00103, rRNA large subunit methyltransferase; Provisional.	1.12997e-69
NZ_CP019390.1\|WP_004688741.1\|1363724_1365053_+\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	2.98304e-156
NZ_CP019390.1\|WP_076771171.1\|1352898_1353456_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	2.96742e-08
NZ_CP019390.1\|WP_002972331.1\|1360342_1360714_+\|ribosome-silencing-factor	gnl\|CDD\|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	1.05797e-48
NZ_CP019390.1\|WP_076771168.1\|1348937_1349612_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|377070	pfam03591, AzlC, AzlC protein.	8.05494e-26
NZ_CP019390.1\|WP_004688740.1\|1365270_1365807_+\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	1.91543e-83
NZ_CP019390.1\|WP_076771165.1\|1334058_1336014_-\|M23-family-metallopeptidase	gnl\|CDD\|223810	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane].	2.70324e-50
NZ_CP019390.1\|WP_002964927.1\|1351804_1352074_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	1.22436e-55
NZ_CP019390.1\|WP_083699653.1\|1354889_1355768_+\|YadA-like-family-protein	gnl\|CDD\|377158	pfam03895, YadA_anchor, YadA-like membrane anchor domain. This region represents the C-terminal 120 amino acids of a family of surface-exposed bacterial proteins. YadA, an adhesin from Yersinia, was the first member of this family to be characterized. UspA2 from Moraxella was second. The Eib immunoglobulin-binding proteins from E. coli were third, followed by the DsrA proteins of Haemophilus ducreyi and others. These proteins are homologous at their C-terminal and have predicted signal sequences, but they diverge elsewhere. The C-terminal 9 amino acids, consisting of alternating hydrophobic amino acids ending in F or W, comprise a targeting motif for the outer membrane of the Gram negative cell envelope. This region is important for oligomerization.	1.46323e-05
NZ_CP019390.1\|WP_179947168.1\|1346331_1346826_-\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	1.37301e-29
NZ_CP019390.1\|WP_009364205.1\|1356023_1357049_+\|GTPase-ObgE	gnl\|CDD\|237048	PRK12299, obgE, GTPase CgtA; Reviewed.	0
NZ_CP019390.1\|WP_076771944.1\|1352194_1352845_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.59957e-34
NZ_CP019390.1\|WP_076771941.1\|1347012_1348941_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	8.01708e-15
NZ_CP019390.1\|WP_076771172.1\|1357076_1358213_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0

>NZ_CP019390.1|WP_076771171.1|1352898_1353456_+|GNAT-family-N-acetyltransferase
MNDICTIARDKVVVRALEKGDLQRYRAIRLNALQRAPMSFGSTFEEENAYSDTIFARRLEQVDGNAIFGAFHGEELLGIAGHHRHERRTERHRGTLASVYVEPQARGLKLGEALVQKVIDHAARHVVVLDARVVATNEAAKRIYYALGFKTCGVERKALLVQGQYLDQKLIYIDFSDPAWKDKLG
>NZ_CP019390.1|WP_076771944.1|1352194_1352845_+|GNAT-family-N-acetyltransferase
MVVEEESYEASCCEREADYADASPGLEKELGYVLDCPILVTERLVLRPPHAEDVDAISYLANNARVSSMLARMPHPYTRENALDFVGRVRKGEMGNCIYAITQAETGIFMGCCGIHPYKHGEGLEIGYWLGEPYWGHGFATEAAHALIDLAFRATGIGRLHVSCRASNGGSRRVIHKCGFQFSGMGMADSLAAGNVPVEHYVLDRRTWIGLRSWHS
>NZ_CP019390.1|WP_002964927.1|1351804_1352074_+|50S-ribosomal-protein-L27
MAHKKAGGSSRNGRDSESKRLGVKKFGGEAVLAGNIIVRQRGTKWHPGANVGLGKDHTIFATVNGSVSFRTKANGRTYVSVNPIAEAAE
>NZ_CP019390.1|WP_076771170.1|1351350_1351779_+|50S-ribosomal-protein-L21
MFAVIKTGGKQYRVAANDLIKVEKVAGEAGDIVEFAEVLMVGSTIGAPTVAGALVTAEVVEQGRGRKVIAFKKRRRQNSKRTRGHRQELTTIRISEILTDGAKPSNKAAEKKAPKADAAEGEATKPKKAAPKKAAAKAESAE
>NZ_CP019390.1|WP_076771169.1|1349611_1349950_+|AzlD-domain-containing-protein
MSTELWIAVIVIGVLTYITRAVPFLMSLAGNTAPAARAWLSALGPCLLSAMATVVFLDGFQTSIQIGKIIPFLVGSVFASVSMSVRPDPGIGTVAGVTGWWLAASIGSVPTF
>NZ_CP019390.1|WP_076771168.1|1348937_1349612_+|AzlC-family-ABC-transporter-permease
MTERWRQFFHGARSAIPIILGYLPVAFAFGTAASGQGLALLDSTAISALMFSGANQAFFLSAVASGLPTIAIVAICAVASLRHILYGFVLRLRLAGGLASRLAFAFGLTDEVFATVLNATEKSKPDGGWIFGLAFFAWISWVAATFFGAWMGNILQAQFLQLSDALHFALPALFLGLVWVSTSARNVIPMVAAAVIAAMFLCLNLPALAIPGAASAALLARRGD
>NZ_CP019390.1|WP_076771941.1|1347012_1348941_+|helix-turn-helix-domain-containing-protein
MNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANALGIEFGELVGARNDVEVVEADGISVRLIDRQTRPRTVEAFLLDLPANAKRHADAHVHGVSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPHIYSSGAEPSRAIVTIIYPEDDTALTSEDQELEWPVGKDEWANVRAQLNRARIEVQNGYAHSRITFKSTPEPLQSAIRLIEDELATRSGIAETAKVFVTGNRTPAIATFYRTTQMRPLPINEQLATPLITNCRELANAAITPWLAKKVDADGLHAKSQNSTHIIEAALAAEVLTRLGRPTVPTGISQKQVTPKQSPLMDRMFEDRIDVDAYEAYELVHPAYARQVLAVAETLPVFATKSDQTILDVGTGSGLPLQMLLELRPELHVVAIDPSEIANVHLSRRFADDSRVQAVQASIIDYRPADYLFDAAVSIGASHHLDTKQFLSSIHECLAAEGVLVIADEMLAPFRDRRERNLALVTHHLWYILDTLFDLPASSSEAERAVCDILKQGLPLAMSLALSGRSEAATRQVRETFKAATDIDLGNALVAREAAFNRFHLLELQALVAGLDYEVEQKTYPARFVSLAESSGFSLLQHRRIYATQGDGSYDAGTHLFVMVKR
>NZ_CP019390.1|WP_179947168.1|1346331_1346826_-|ISAs1-family-transposase
MTGPSPCSLTLLDHFSALSAPRQRWKVACPLEEILLVVLCATISGMEGFVETKLWVEHRLEFLRRFLPFERGIPSHDTLNDVINALEPALFKECFTNWVEALRERDGDIIAIDGKTSRRSHDRGKGRGPLHMVSAWATRQRLVLDSKPARKKVLSQILIMLKAA
>NZ_CP019390.1|WP_076771166.1|1344048_1344723_+|hypothetical-protein
MTDLIHIHEDDWGMRNLFPLAAFSEVKEDIARSATAAEKHQDASGFGYTDVYLMEPPSISYADVGLLVSDAESVLLPILPRVQHFRATSFQGMKSGKHDPYGTYQDDTSCFGLGRHCYLKLDKKGPLVEGIWFGLDTDDADAIGRLRMAIEAIDALVPSVIADYFLDISGPVGADGVLDSYFEAFQLQHRKAKQAVQEFQAKYQRQENMLDKLRKLVAFLGRFR
>NZ_CP019390.1|WP_076771165.1|1334058_1336014_-|M23-family-metallopeptidase
MKELGPNNLDPGDEPPLSVGGRRRPPDRREVSARWLAGTFLTGVTSCMLIGIALFAALDGREQLATPPEILARNEMPGITEDDTATKGGRLISMVSQQKTRDRRRFDLSTMQRVGEREVIRTKPFEFVRMALAVDHPTNRKYPPFNAMTIFSEGPAAPQPSDAGQIYGAKVESEVSLRVVDFPISTATFDASSDLTVDEVEKVVRDTGGLLTDGDVQVASLHYVDPARFGGNDSPFALSPPLGVKITQENVSIAPRSDDEQANEGFSEELIPFRQTADIAQALEDAGYTGEDASNMAEALAKLMNSPRLKQGSVLRVGTESHDGNDRIVRASIYNRTTHLVTVALNDRQQYVPSDEPEETPLLQTAFDGNAAPAAIRGNLPSVYDGISHAALAYGMTETMREQLVKMLASDVDLQARLSPSDAIDAFFSLPDDPEKPENDSQLLYVAATFGGTTRKFYRYQAPDGSVDYYNEDGKSAKQFLLRNPVPNGIFRSPFGMRRHPILGYTRMHTGVDWAAPRGTPIIAAGNGVVEKAGWSNGYGNQTLIRHANGYVTSYSHQNAIARGITPGARVRQGQVIGYVGSTGLSTGPHLHYELIVNGTKVDALRIRLPDNKALKGKEFEAFKQERDRIDTLLNSDENGTKLASNGSAKS
>NZ_CP019390.1|WP_083699653.1|1354889_1355768_+|YadA-like-family-protein
MGRNSGRIDTNAKGVADNRAAIGRNSGRIDTNAKGVADNKAAIGRNSSRIDTNAKGVADNRAAIGRNSGRIDANAKGVADNRAAIGRNSGRIDTNAKGVADNRAAIGRNSGRIDTNAKGVADNKTAIGRNSGRIDTNAKGVADNRAAIGRNSGRIDTNTKGVADNRAAINQNRGRINANAAGVASNRAAIRQNSAAISALGQRVDGLQGQINSARKEARAGAANAAALSGLRYDNRPGKVSIATGVGGFKGSTALAAGIGYTSKNENARYNVSVAYNEAGTSWNAGASFTLN
>NZ_CP019390.1|WP_009364205.1|1356023_1357049_+|GTPase-ObgE
MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYRYQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKGGNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVTAAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVLLHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKACGREPLLLSAVSHEGLNDTLRQLARIIDLSRAEEAGTAQAEE
>NZ_CP019390.1|WP_076771172.1|1357076_1358213_+|glutamate-5-kinase
MLKKLKDYRRIVVKIGSGLLVDRATGLKREWLESLGQDIAALQHAGVEVLVVSSGAIALGRTVLGLPKKALKLEESQAAAAAGQIALAKAYADVLGGHGIKSGQILVTLSDTEERRRYLNARATIETLLKLKAVPIINENDTVATTEIRYGDNDRLAARVATMMGADLLILLSDIDGLYTAPPHKNPDAQFLPFVETITPQIEAMAGAAASELSRGGMKTKLDAGKIANAAGTAMIITSGTRFGPLSAIDRGERATLFEAAHAPVNAWKTWISGNLEPAGRLTVDAGAVKALKSGKSLLPAGVKDVDGDFERGDTVAVMNEDGREIARGLIAYDAADARKVAGHKSDEISAILGYDARAAMIHRNDLVVRAASDAKAA
>NZ_CP019390.1|WP_076771173.1|1358222_1359506_+|glutamate-5-semialdehyde-dehydrogenase
MLVKADMTKDIAQVMAEVGRKAKAAAAPLSIATSEQKNKALNAAGDAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAIAALPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVKGLEAASLPADAIQIVPVTDRAAVGEMLKGLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLEMARRIALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIISVALVDGISGAINHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVRGSGQVRG
>NZ_CP019390.1|WP_070997100.1|1359505_1360180_+|nicotinate-nucleotide-adenylyltransferase
MKFGFGLSALKEQYPGVDAHYLRMPHVEKGMTVGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEEVAEDPRIKVTALEAAFHVRYTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRMAQTFSDSRLDERYAPVLARRMPPAWTFIHGPRSSLSSTALRKVQSKKAPSKK
>NZ_CP019390.1|WP_002972331.1|1360342_1360714_+|ribosome-silencing-factor
MNETNLVSATFDAALASLENSKAESIIPIDIRGRSTIGDYMIVASGRSHRHVTAVADHLVQALREAGCKEMRVEGLESGDWVLIDTGDIIVHIFRPEVRDFYNLEKIWLDDDFGDERAPGLVH
>NZ_CP019390.1|WP_076771174.1|1360732_1361257_+|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MRVSVFAVGRMKSGPERELVERYLDRFAKAGPPLGLEFAGVSEIPESRGQTAQLRKAEEAQRIHEALDNAKSGGAKSGGTSSGGAALILLDERGKTLGSEAFAATVGHMRDDGKRQLIVAIGGPDGHDPALRSRADLVLALGELTWPHQIARILIAEQLYRAATILAGHPYHRS
>NZ_CP019390.1|WP_076771175.1|1361374_1362274_+|hypothetical-protein
MSRPTIITLSSIPPRFGLLKPTLLSLLSQRLKAEEVRLYIPHKYRRFPDWDGRLPEVPAGITIVRCDEDLGPATKVLPAARDLKGRDVDILFCDDDKIYDANWHQRFKAEAARKPGHCIIEDGETFPDIADAGRPADRLPRSRWKPKDFKYRMKRIASLFLYKPNRGTPGYVDRISGFAGVLVHPDWFDELFYDIPDIMWTVDDPWISGHLERRGIPIWMIGRNSRRAEGKASGVSALLNHVEDGQDRVDADLLVIDYFRQHYGIWQKTEMIDEKATLRTASMREMMRRRKAELGLIDP
>NZ_CP019390.1|WP_004688741.1|1363724_1365053_+|S41-family-peptidase
MIRKLSLLFAGALLGASAMVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSLDPHSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPITLKINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLRLNPGGLLDQAVAVSDAFLDKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVLGTQSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNEALKLLRGEVANAAFPPDPKKGVLN
>NZ_CP019390.1|WP_004688740.1|1365270_1365807_+|RNA-pyrophosphohydrolase
MSKHKGPTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHLVGLALKGKYRGQTQKWFAYRFEGDESEIAINPPPGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFRHLAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019390_1	1.1\|310330\|27\|NZ_CP019390\|PILER-CR	310330-310356	27	MF370964	Pseudoalteromonas phage SL20, complete genome	18053-18079	4	0.852
NZ_CP019390_1	1.2\|310377\|26\|NZ_CP019390\|PILER-CR	310377-310402	26	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	534180-534205	4	0.846
NZ_CP019390_2	2.1\|1044090\|35\|NZ_CP019390\|CRISPRCasFinder	1044090-1044124	35	MW091529	Bacteriophage sp. 103231, partial genome	17779-17813	4	0.886
NZ_CP019390_1	1.1\|310330\|27\|NZ_CP019390\|PILER-CR	310330-310356	27	NC_006298	Histophilus somni 129PT plasmid pHS129, complete sequence	4433-4459	5	0.815
NZ_CP019390_1	1.2\|310377\|26\|NZ_CP019390\|PILER-CR	310377-310402	26	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	448519-448544	5	0.808
NZ_CP019390_1	1.2\|310377\|26\|NZ_CP019390\|PILER-CR	310377-310402	26	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	427107-427132	5	0.808
NZ_CP019390_1	1.2\|310377\|26\|NZ_CP019390\|PILER-CR	310377-310402	26	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	469166-469191	5	0.808

1. spacer 1.1|310330|27|NZ_CP019390|PILER-CR matches to MF370964 (Pseudoalteromonas phage SL20, complete genome) position: , mismatch: 4, identity: 0.852

taaattccccttccaaagcaaatcaat	CRISPR spacer
ttaattctccttccaaagcaaatccgt	Protospacer
* *****.**************** .*

2. spacer 1.2|310377|26|NZ_CP019390|PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 4, identity: 0.846

gattggcgcaccccatggggacgcgc	CRISPR spacer
acttggcgcaccccttgggggcgcgc	Protospacer
. ************ *****.*****

3. spacer 2.1|1044090|35|NZ_CP019390|CRISPRCasFinder matches to MW091529 (Bacteriophage sp. 103231, partial genome) position: , mismatch: 4, identity: 0.886

actctttgtttttacgcattatccaacgcaaaact	CRISPR spacer
tctcttggtttttacgcattatccgacgcaaaacc	Protospacer
 ***** *****************.*********.

4. spacer 1.1|310330|27|NZ_CP019390|PILER-CR matches to NC_006298 (Histophilus somni 129PT plasmid pHS129, complete sequence) position: , mismatch: 5, identity: 0.815

taaattccccttccaaagcaaatcaat	CRISPR spacer
gatattccccttccaaagcaaaactag	Protospacer
 * ******************* * *

5. spacer 1.2|310377|26|NZ_CP019390|PILER-CR matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 5, identity: 0.808

gattggcgcaccccatggggacgcgc	CRISPR spacer
cgatggcgcgccccatggcgacgcgc	Protospacer
 . ******.******** *******

6. spacer 1.2|310377|26|NZ_CP019390|PILER-CR matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 5, identity: 0.808

gattggcgcaccccatggggacgcgc	CRISPR spacer
cgatggcgcgccccatggcgacgcgc	Protospacer
 . ******.******** *******

7. spacer 1.2|310377|26|NZ_CP019390|PILER-CR matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 5, identity: 0.808

gattggcgcaccccatggggacgcgc	CRISPR spacer
cgatggcgcgccccatggcgacgcgc	Protospacer
 . ******.******** *******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

86022 : 100601

Stenotrophomonas_phage(28.57%)

portal,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076770498.1\|86022_86346_-	DUF2190 family protein	A0A2I7S8N5	Vibrio_phage	4.1e-06	35.5
WP_076770499.1\|86414_88055_-	hypothetical protein	B7SYD7	Stenotrophomonas_phage	6.7e-36	29.6
WP_076770500.1\|88153_88807_-	hypothetical protein	B7SYD7	Stenotrophomonas_phage	1.4e-32	44.6
WP_076770501.1\|88793_90326_-\|portal	phage portal protein	B7SYD6	Stenotrophomonas_phage	2.1e-79	37.9
WP_041545160.1\|90325_90520_-	hypothetical protein	NA	NA	NA	NA
WP_076770502.1\|90522_92340_-\|terminase	phage terminase large subunit family protein	D6PFE7	uncultured_phage	3.9e-69	32.7
WP_076770503.1\|92254_93283_-\|terminase	phage terminase large subunit family protein	B7SYD3	Stenotrophomonas_phage	7.2e-28	30.4
WP_076770504.1\|93257_93977_-\|terminase	terminase small subunit	NA	NA	NA	NA
WP_076770505.1\|94176_94746_-	hypothetical protein	A0A0A8IL87	Aurantimonas_phage	3.0e-28	44.7
WP_083699574.1\|95124_95781_-	hypothetical protein	A0A068C9G5	Rhizobium_phage	4.5e-07	25.9
WP_076770507.1\|95767_96922_-	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	9.6e-05	32.1
WP_076770508.1\|96918_97578_-	hypothetical protein	A0A291AUT5	Sinorhizobium_phage	1.7e-70	62.4
WP_083699576.1\|97574_98090_-	hypothetical protein	A0A291AUJ2	Sinorhizobium_phage	1.0e-19	57.3
WP_076770510.1\|98086_98434_-	DUF4406 domain-containing protein	W6E9N4	Rhizobium_phage	1.5e-25	59.6
WP_076770511.1\|98433_99750_-	ParB N-terminal domain-containing protein	A0A0M3LPV8	Mannheimia_phage	6.8e-23	38.3
WP_076770512.1\|99861_100128_-	hypothetical protein	NA	NA	NA	NA
WP_076770513.1\|100124_100601_-	hypothetical protein	A0A291AUS4	Sinorhizobium_phage	2.5e-31	50.0

DBSCAN-SWA_2

116259 : 128177

uncultured_Mediterranean_phage(90.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076770534.1\|116259_118587_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	6.2e-51	43.5
WP_002964021.1\|118705_119047_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	9.1e-12	40.2
WP_076770535.1\|119206_120073_+	ATP-binding protein	NA	NA	NA	NA
WP_076770536.1\|120121_121420_-	peptidoglycan DD-metalloendopeptidase family protein	Q8SBN9	Clostridium_phage	1.0e-18	41.1
WP_004683704.1\|121800_122469_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.6e-14	38.5
WP_004683703.1\|122465_123233_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.0e-39	40.2
WP_076771750.1\|123381_124665_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-105	47.4
WP_002964014.1\|124741_125566_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	9.8e-44	41.1
WP_076771752.1\|125562_126132_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_002964012.1\|126243_126462_-	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	1.5e-07	65.1
WP_076770537.1\|126607_127333_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	8.6e-44	45.7
WP_076770538.1\|127325_128177_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.0e-31	33.9

DBSCAN-SWA_3

390079 : 436805

Rhodobacter_phage(37.5%)

tail,integrase,protease,head

attL 380829:380844|attR 391021:391036

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
380829:380844	attL	NA	NA	NA	NA
WP_076770700.1\|390079_391006_+\|integrase	site-specific integrase	A0A076YL28	Mesorhizobium_phage	3.8e-28	36.4
WP_076770701.1\|391529_392663_+	pyridoxal phosphate-dependent aminotransferase	A0A1X7QHI1	Faustovirus	2.4e-16	24.2
391021:391036	attR	NA	NA	NA	NA
WP_076771786.1\|392680_393055_+	DUF423 domain-containing protein	NA	NA	NA	NA
WP_076770702.1\|393099_393750_-	antifreeze protein	NA	NA	NA	NA
WP_076771788.1\|394523_395177_+	YitT family protein	NA	NA	NA	NA
WP_004683353.1\|395235_395493_-	sel1 repeat family protein	NA	NA	NA	NA
WP_076770703.1\|395762_396002_+	hypothetical protein	NA	NA	NA	NA
WP_002963776.1\|395998_396346_+	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_009364522.1\|396404_397115_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_008508600.1\|397473_397641_+	hypothetical protein	NA	NA	NA	NA
WP_008508597.1\|397681_399184_+	AMP nucleosidase	NA	NA	NA	NA
WP_154144614.1\|399359_400328_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_009364526.1\|400604_402296_-	electron transfer flavoprotein-ubiquinone oxidoreductase	NA	NA	NA	NA
WP_009364527.1\|402684_403557_+	uracil-DNA glycosylase	NA	NA	NA	NA
WP_076770705.1\|403715_404972_+	MFS transporter	NA	NA	NA	NA
WP_002963767.1\|404976_405936_-	DMT family transporter	NA	NA	NA	NA
WP_076770706.1\|406161_408813_+	aminopeptidase N	NA	NA	NA	NA
WP_076770707.1\|409203_411555_+	PAS-domain containing protein	A0A1V0SGX0	Hokovirus	6.3e-27	34.8
WP_076770708.1\|411829_413941_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_076770709.1\|413970_416922_-	bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA	NA	NA	NA
WP_025199586.1\|417040_418447_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_002963761.1\|418443_419151_-	response regulator transcription factor	NA	NA	NA	NA
WP_076770710.1\|419244_420786_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	1.7e-28	29.8
WP_059242733.1\|420927_421404_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_076770711.1\|421400_423392_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_076770712.1\|423411_423909_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_076770713.1\|423905_425045_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
WP_076770714.1\|425145_425598_-	hypothetical protein	NA	NA	NA	NA
WP_076770715.1\|425691_427002_-	histidine kinase	NA	NA	NA	NA
WP_076770716.1\|427076_427766_-	response regulator transcription factor	NA	NA	NA	NA
WP_002971526.1\|427844_428141_-	hypothetical protein	NA	NA	NA	NA
WP_008508561.1\|428302_428509_-	hypothetical protein	NA	NA	NA	NA
WP_076770717.1\|428573_432437_-\|tail	glycoside hydrolase/phage tail family protein	A0A0K1LL82	Rhodobacter_phage	7.2e-214	38.5
WP_076770718.1\|432440_432875_-	C40 family peptidase	NA	NA	NA	NA
WP_076770719.1\|432871_433747_-	DUF2163 domain-containing protein	A0A0K1Y6Z2	Rhodobacter_phage	2.9e-46	37.9
WP_076770720.1\|433743_434376_-	TIGR02217 family protein	A0A0K1Y6G4	Rhodobacter_phage	1.7e-48	50.9
WP_076770721.1\|434378_434924_-\|tail	phage tail tape measure protein	A0A0S2SYD9	Pseudomonas_phage	1.7e-07	46.4
WP_070997847.1\|435143_435485_-	gene transfer agent family protein	NA	NA	NA	NA
WP_008935501.1\|435481_435895_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_076770722.1\|435935_436343_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_004688128.1\|436302_436470_-	hypothetical protein	NA	NA	NA	NA
WP_004688127.1\|436466_436805_-\|head	phage head closure protein	NA	NA	NA	NA

DBSCAN-SWA_4

1520986 : 1528235

Ochrobactrum_phage(42.86%)

plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076771236.1\|1520986_1521796_-	DNA adenine methylase	A0A219VHB5	Ochrobactrum_phage	4.4e-121	76.7
WP_179947171.1\|1521928_1522360_-	hypothetical protein	A0A219VHA6	Ochrobactrum_phage	1.5e-35	73.1
WP_076771237.1\|1522368_1522842_-	hypothetical protein	A0A219VHA5	Ochrobactrum_phage	3.0e-29	64.4
WP_076771238.1\|1522853_1524227_-	DUF2793 domain-containing protein	R9U0V1	Rhizobium_phage	4.4e-57	48.3
WP_076771239.1\|1524228_1524822_-	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_076771240.1\|1524818_1525961_-\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	2.6e-18	28.7
WP_076771241.1\|1525960_1526416_-	phage GP46 family protein	NA	NA	NA	NA
WP_076771242.1\|1526478_1526994_-\|plate	phage baseplate assembly protein	R9TP58	Rhizobium_phage	5.4e-16	39.3
WP_076771243.1\|1527002_1528235_-	Mu P family protein	A0A2P9JZK3	Alteromonadaceae_phage	1.9e-27	27.3

DBSCAN-SWA_5

1611906 : 1647321

Rhizobium_phage(40.0%)

portal,capsid,terminase,tail,integrase,head

attL 1595782:1595798|attR 1633188:1633204

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1595782:1595798	attL	NA	NA	NA	NA
WP_083699655.1\|1611906_1613103_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_179947174.1\|1613071_1613263_-	hypothetical protein	NA	NA	NA	NA
WP_076771292.1\|1613265_1613514_-	hypothetical protein	NA	NA	NA	NA
WP_076771293.1\|1613510_1613723_-	hypothetical protein	X2CXR7	Brucella_phage	2.1e-11	55.4
WP_076771295.1\|1613897_1614179_-	hypothetical protein	A0A1X9HWB1	Ruegeria_phage	5.4e-10	65.9
WP_076771296.1\|1614175_1614598_-	hypothetical protein	NA	NA	NA	NA
WP_076771297.1\|1614594_1615065_-	hypothetical protein	NA	NA	NA	NA
WP_154144880.1\|1615061_1615199_-	hypothetical protein	NA	NA	NA	NA
WP_154144882.1\|1615195_1615978_-	hypothetical protein	A0A240F4V0	Ochrobactrum_phage	6.5e-21	50.6
WP_076771299.1\|1616170_1616431_-	hypothetical protein	NA	NA	NA	NA
WP_076771300.1\|1616590_1616815_-	hypothetical protein	NA	NA	NA	NA
WP_154146644.1\|1616811_1617138_-	hypothetical protein	NA	NA	NA	NA
WP_076771302.1\|1617139_1617406_-	hypothetical protein	NA	NA	NA	NA
WP_076771303.1\|1617560_1618175_+	hypothetical protein	NA	NA	NA	NA
WP_179947175.1\|1618134_1618584_-	hypothetical protein	NA	NA	NA	NA
WP_076771304.1\|1619277_1619580_+	hypothetical protein	NA	NA	NA	NA
WP_076771305.1\|1619579_1620431_+	hypothetical protein	B4UTW2	Rhizobium_phage	8.1e-09	27.2
WP_154144888.1\|1620427_1620604_+	hypothetical protein	NA	NA	NA	NA
WP_076771306.1\|1620588_1620795_+	hypothetical protein	NA	NA	NA	NA
WP_179947176.1\|1620934_1621756_+	AAA family ATPase	B4UTW5	Rhizobium_phage	5.9e-41	37.6
WP_076771988.1\|1622142_1622367_+	HNH endonuclease	B4UTX2	Rhizobium_phage	1.1e-18	55.6
WP_076771307.1\|1622398_1622962_+	DUF669 domain-containing protein	A0A1J0GWE4	Alteromonas_phage	1.9e-06	31.4
WP_076771308.1\|1623022_1624060_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	2.3e-74	43.7
WP_156884116.1\|1624026_1624242_+	hypothetical protein	NA	NA	NA	NA
WP_179947177.1\|1624238_1624769_+	HNH endonuclease	A0A2H4FNF1	Salmonella_phage	1.7e-36	42.9
WP_076771310.1\|1624768_1625710_+	oxidoreductase	B4UTX3	Rhizobium_phage	2.6e-133	71.4
WP_076771311.1\|1625709_1627455_+	DEAD/DEAH box helicase family protein	A0A1J0GWD7	Alteromonas_phage	2.0e-91	34.7
WP_076771312.1\|1627547_1628288_+	hypothetical protein	B4UTX9	Rhizobium_phage	2.5e-59	55.2
WP_154144892.1\|1628284_1628485_+	hypothetical protein	NA	NA	NA	NA
WP_076771313.1\|1629040_1630423_+	helicase	F8TUW6	EBPR_podovirus	5.7e-121	50.3
WP_076771314.1\|1630419_1631364_+	site-specific DNA-methyltransferase	A0A0F7L417	uncultured_marine_virus	2.6e-77	48.0
WP_076771315.1\|1631353_1631674_+	hypothetical protein	B4UTY6	Rhizobium_phage	3.9e-17	47.5
WP_076771316.1\|1631681_1632728_+	DNA cytosine methyltransferase	W0LM09	Edwardsiella_phage	2.4e-111	61.1
WP_025091060.1\|1632693_1632903_-	hypothetical protein	NA	NA	NA	NA
WP_076771317.1\|1633003_1633192_-	hypothetical protein	NA	NA	NA	NA
WP_076771318.1\|1633219_1633789_+	hypothetical protein	NA	NA	NA	NA
1633188:1633204	attR	NA	NA	NA	NA
WP_076771319.1\|1633785_1636149_+	bifunctional DNA primase/polymerase	B4UTY9	Rhizobium_phage	6.9e-66	45.7
WP_076771320.1\|1636545_1637043_+	VRR-NUC domain-containing protein	B4UTZ1	Rhizobium_phage	5.5e-34	54.8
WP_076771321.1\|1637039_1637957_+	hypothetical protein	NA	NA	NA	NA
WP_076771990.1\|1638521_1638725_+	hypothetical protein	NA	NA	NA	NA
WP_076771322.1\|1638711_1639011_+	HNH endonuclease	M4QRD8	Tetraselmis_viridis_virus	2.4e-16	41.8
WP_076771323.1\|1639120_1639507_+	hypothetical protein	NA	NA	NA	NA
WP_076771324.1\|1639508_1641362_+\|terminase	terminase	A0A0U2C138	Paracoccus_phage	5.4e-175	54.7
WP_076771991.1\|1641370_1642609_+\|portal	phage portal protein	Q9XJT5	Pseudomonas_phage	2.7e-69	38.9
WP_076771325.1\|1642618_1643737_+	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	3.2e-37	36.4
WP_076771326.1\|1643751_1644969_+\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	3.7e-108	58.3
WP_076771328.1\|1645268_1645601_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_076771331.1\|1646491_1646857_+\|head,tail	head-tail adaptor protein	B4UTP9	Rhizobium_phage	1.6e-09	33.6
WP_076771332.1\|1646856_1647321_+	HK97 gp10 family phage protein	A0A141GEW6	Brucella_phage	1.8e-18	40.8

DBSCAN-SWA_6

1662246 : 1672021

Sinorhizobium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076771349.1\|1662246_1663110_+	chitinase	A0A291AUN6	Sinorhizobium_phage	6.2e-81	54.6
WP_076771350.1\|1663106_1663298_+	hypothetical protein	NA	NA	NA	NA
WP_076771351.1\|1663294_1663531_+	hypothetical protein	NA	NA	NA	NA
WP_076771352.1\|1663968_1664304_+	hypothetical protein	B4UTS1	Rhizobium_phage	4.7e-13	40.4
WP_076771353.1\|1664419_1665709_+	hypothetical protein	A0A0K0PVN1	Roseobacter_phage	4.1e-73	38.0
WP_076771354.1\|1665714_1665921_+	hypothetical protein	A0A0F6SJ45	Sinorhizobium_phage	6.4e-29	85.1
WP_154144917.1\|1666235_1666844_+	phosphohydrolase	B4UTT6	Rhizobium_phage	3.2e-60	63.7
WP_076771356.1\|1667079_1667412_+	hypothetical protein	B4UTT8	Rhizobium_phage	6.3e-18	44.4
WP_076771358.1\|1667885_1668134_-	DUF982 domain-containing protein	NA	NA	NA	NA
WP_076771359.1\|1668279_1668474_-	hypothetical protein	A0A141GEZ2	Brucella_phage	1.5e-08	47.5
WP_076771360.1\|1668484_1669162_-	SOS response-associated peptidase	A0A291AUP1	Sinorhizobium_phage	6.1e-52	47.3
WP_076771363.1\|1669626_1669926_-	hypothetical protein	NA	NA	NA	NA
WP_076771364.1\|1669922_1670120_-	hypothetical protein	NA	NA	NA	NA
WP_029926951.1\|1670289_1670526_-	hypothetical protein	NA	NA	NA	NA
WP_029926953.1\|1670525_1670711_-	hypothetical protein	NA	NA	NA	NA
WP_076772003.1\|1671238_1672021_+	glycosyltransferase family 25 protein	A0A1S5NQ44	Burkholderia_phage	3.6e-11	27.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP019391

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019391_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019391_1

127054-127196

Orphan

Consensus_repeat	Method
TCGCATTTTCCAACGCAAAACCGCTTCACACTTTTGCTGGAAATGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019391_1

>merge|NZ_CP019391|1|127054-127196|CRISPRCasFinder
TCGCATTTTCCAACGCAAAACCGCTTCACACTTTTGCTGGAAATGCTCCAGAGCGGGTTCCTGTTTTAACGGAACCGCTCTAACTATTTGTTTTGTCGCATTTTCCAACGCAAAACCGTTTCACACTTTTGCTGGAAATGCTC

>NZ_CP019391|1|1|127054-127196|CRISPRCasFinder
TCGCATTTTCCAACGCAAAACCGCTTCACACTTTTGCTGGAAATGCTC	CAGAGCGGGTTCCTGTTTTAACGGAACCGCTCTAACTATTTGTTTTG
TCGCATTTTCCAACGCAAAACCGTTTCACACTTTTGCTGGAAATGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019391.1\|WP_076772241.1\|128852_129899_-\|flagellar-hook-associated-family-protein	unknown	unknown	gnl\|CDD\|235669
NZ_CP019391.1\|WP_076772233.1\|121884_122412_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019391.1\|WP_002966643.1\|133082_133766_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP019391.1\|WP_076772235.1\|122408_122903_-\|flagellar-protein-FlgN	unknown	unknown	unknown
NZ_CP019391.1\|WP_076772247.1\|131483_132674_-\|flagellar-hook-protein-FlgE	unknown	unknown	gnl\|CDD\|235557
NZ_CP019391.1\|WP_076772226.1\|119290_120187_+\|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224046
NZ_CP019391.1\|WP_076772237.1\|124098_124866_-\|flagellar-type-III-secretion-system-protein-FliR	unknown	unknown	gnl\|CDD\|183741
NZ_CP019391.1\|WP_076772244.1\|129904_131359_-\|flagellar-hook-associated-protein-FlgK	unknown	unknown	gnl\|CDD\|236038
NZ_CP019391.1\|WP_002966647.1\|128376_128721_-\|flagellar-biosynthesis-regulator-FlaF	unknown	unknown	gnl\|CDD\|237206
NZ_CP019391.1\|WP_069714511.1\|123025_123616_-\|rod-binding-protein	unknown	unknown	gnl\|CDD\|378407
NZ_CP019391.1\|WP_002966657.1\|121561_121897_+\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|377796
NZ_CP019391.1\|WP_002966649.1\|127506_127920_-\|flagellar-hook-assembly-protein-FlgD	unknown	unknown	gnl\|CDD\|235670
NZ_CP019391.1\|WP_076772240.1\|124881_126999_-\|flagellar-biosynthesis-protein-FlhA	unknown	unknown	gnl\|CDD\|237205
NZ_CP019391.1\|WP_076772231.1\|120997_121435_+\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP019391.1\|WP_004680988.1\|127916_128375_-\|flagellar-biosynthesis-repressor-FlbT	unknown	unknown	gnl\|CDD\|227730
NZ_CP019391.1\|WP_076772253.1\|134618_135893_-\|flagellar-hook-length-control-protein-FliK	unknown	unknown	gnl\|CDD\|376734
NZ_CP019391.1\|WP_002966650.1\|127228_127495_-\|flagellar-biosynthetic-protein-FliQ	unknown	unknown	gnl\|CDD\|235671
NZ_CP019391.1\|WP_076772229.1\|120140_121001_+\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|181938
NZ_CP019391.1\|WP_015799984.1\|123683_124091_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019391.1\|WP_076772252.1\|134092_134665_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381603

Protein	Function_ID	Function_description	E-value
NZ_CP019391.1\|WP_076772241.1\|128852_129899_-\|flagellar-hook-associated-family-protein	gnl\|CDD\|235669	PRK06008, flgL, flagellar hook-associated family protein.	9.857e-151
NZ_CP019391.1\|WP_002966643.1\|133082_133766_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.01021e-42
NZ_CP019391.1\|WP_076772244.1\|129904_131359_-\|flagellar-hook-associated-protein-FlgK	gnl\|CDD\|236038	PRK07521, flgK, flagellar hook-associated protein FlgK; Validated.	0
NZ_CP019391.1\|WP_076772247.1\|131483_132674_-\|flagellar-hook-protein-FlgE	gnl\|CDD\|235557	PRK05682, flgE, flagellar hook protein FlgE; Validated.	8.47147e-151
NZ_CP019391.1\|WP_076772226.1\|119290_120187_+\|metal-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	1.38642e-104
NZ_CP019391.1\|WP_076772237.1\|124098_124866_-\|flagellar-type-III-secretion-system-protein-FliR	gnl\|CDD\|183741	PRK12780, fliR, flagellar biosynthesis protein FliR; Reviewed.	1.0634e-84
NZ_CP019391.1\|WP_076772252.1\|134092_134665_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381603	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	2.47914e-14
NZ_CP019391.1\|WP_002966647.1\|128376_128721_-\|flagellar-biosynthesis-regulator-FlaF	gnl\|CDD\|237206	PRK12793, flaF, flagellar biosynthesis regulator FlaF.	1.05626e-57
NZ_CP019391.1\|WP_069714511.1\|123025_123616_-\|rod-binding-protein	gnl\|CDD\|378407	pfam10135, Rod-binding, Rod binding protein. Members of this family are involved in the assembly of the prokaryotic flagellar rod.	3.25891e-07
NZ_CP019391.1\|WP_002966657.1\|121561_121897_+\|PilZ-domain-containing-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	0.00077468
NZ_CP019391.1\|WP_002966649.1\|127506_127920_-\|flagellar-hook-assembly-protein-FlgD	gnl\|CDD\|235670	PRK06009, flgD, flagellar hook assembly protein FlgD.	1.4431e-53
NZ_CP019391.1\|WP_076772240.1\|124881_126999_-\|flagellar-biosynthesis-protein-FlhA	gnl\|CDD\|237205	PRK12792, flhA, flagellar biosynthesis protein FlhA; Reviewed.	0
NZ_CP019391.1\|WP_076772231.1\|120997_121435_+\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	2.21897e-37
NZ_CP019391.1\|WP_004680988.1\|127916_128375_-\|flagellar-biosynthesis-repressor-FlbT	gnl\|CDD\|227730	COG5443, FlbT, Flagellar biosynthesis regulator FlbT [Cell motility and secretion].	6.34048e-83
NZ_CP019391.1\|WP_002966650.1\|127228_127495_-\|flagellar-biosynthetic-protein-FliQ	gnl\|CDD\|235671	PRK06010, fliQ, flagellar biosynthesis protein FliQ; Reviewed.	2.8289e-38
NZ_CP019391.1\|WP_076772229.1\|120140_121001_+\|metal-ABC-transporter-permease	gnl\|CDD\|181938	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB.	1.45189e-83
NZ_CP019391.1\|WP_076772253.1\|134618_135893_-\|flagellar-hook-length-control-protein-FliK	gnl\|CDD\|376734	pfam02120, Flg_hook, Flagellar hook-length control protein FliK. This is the C terminal domain of FliK. FliK controls the length of the flagellar hook by directly measuring the hook length as a molecular ruler. This family also includes YscP of the Yersinia type III secretion system, and equivalent proteins in other pathogenic bacterial type III secretion systems.	7.053e-09

>NZ_CP019391.1|WP_076772240.1|124881_126999_-|flagellar-biosynthesis-protein-FlhA
MSVAKQEADVQQAAAKPFTKGKFLTGSDIGLAVGIIIILTVLFLPVPAVVLDIGLAFSIAFSVLILMVALWIQRPLDFSAFPTVLLIATMMRLSLNIATTRVILTHGNEGYLAAGHVIHGFSQFVMGGDFVIGLVVFAILIIVNFLVITKGATRIAEVGARFTLDAIPGKQMAIDADLSSGLIDEKEAQRRRRELEEESSFFGSMDGASKFVRGDAIAGLIITAVNIFGGIVIGATRHGMDISQAADVFTKLSVGDGLVTQIPALIVSLAAGLLVSKGGTRGSADQAIFGQLGAYPKALLIAALLLFILGVMPGLPAFPFFLLGGAMAFVGIAVPRRQARQREADAAEAGKKQREAEEQERNSVKASLETNQIELCLGKQLSARLIASQEELAHRVNKMRRKFAQEYGFVIPEIKVTDDIALPPKSYRIKIHGTAVASHELRVGEILVVLGERPVPSVPGEEVREPAFGMRAYSVPETFTADLRREGYMTVDNLSVLLTHLSEIVRNNLAQLLSYKDMRILLDRLGPEYRKLLEDICPAHISYSGLQAVLKLLLAERISIRNLHLILEAIAEIAPLVRRPEMIVEHVRMRMAQQICGDLSDNGVLNVLRLGNRWDLVFHQSLKRDAKGEIVEFDIDPRLLEQFGTEASAAIRKHFDNGERFVLVSSPEARPYIRMIIERLFATLPVLSHVEIARGVEVKSLGAIS
>NZ_CP019391.1|WP_076772237.1|124098_124866_-|flagellar-type-III-secretion-system-protein-FliR
MPVTQLPLNEIILAAVLAFCRIGACLMLMPGISSARIPLQVRLFIALACSFAVLPLVLQRIVTAVDAGQPWTLFRLMAGEMFIGALIGILAHIYFWALQFMANMLAMAVGYSGSPADSVTENEPQATLATIVTFSALFLFFVTDMHLEIFRALLNSYVAIPVDGRFRPDAAMIDFTDALSAAFLATLRIAAPFIVFAILVNFAIGLVNKLTPAIPVYFISMPFVLGGGLLVVYFILPELLRFFTHETATELRELF
>NZ_CP019391.1|WP_015799984.1|123683_124091_-|hypothetical-protein
MAQAGTRNLRKLVELQKLGCARHEAALAIANARKSALDEERAALIAMQDRRYDANALDIDPSLVIRRLETNAVEMQQVESRLELARKALLKEQRRVELLQDRLNDAQADRERRELASLIEEFVSRKTSDESQKRS
>NZ_CP019391.1|WP_069714511.1|123025_123616_-|rod-binding-protein
MAINPPSDLVMDVARAADPQAYRMAAERLNAASGVAAPMGGSAATGLTRDNFGSFSENLAAGVSVRPDAQSAASPAYRKFEAFMLQSFVQSMFTSDTTATFGKGIAGEYWKSMMAEAMANKMADGGGVGIARLLEEQAARNRRAEAPATLALGDVIDTLDVNAGEKAVSKDIIHGLERKLIQKQLGNNNSTDRAHG
>NZ_CP019391.1|WP_076772235.1|122408_122903_-|flagellar-protein-FlgN
MIKDQKMTETSSENSLPPEDLLIVAASCEPEQEHVREPALVRDAALKPVMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGLQPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYNMQSARLGHAR
>NZ_CP019391.1|WP_076772233.1|121884_122412_-|hypothetical-protein
MIRIIVIGLWICAVAFGSLFLAVNRDVSASAVVEAMPGGFGGVDYVKTDVMSVPIISNGAVTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGSYSDTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPSGRNRKADAEPAAQSE
>NZ_CP019391.1|WP_002966657.1|121561_121897_+|PilZ-domain-containing-protein
MARVKPPQERRREERQRTRLRSGKIVNLDGRFVVECQFIDIAPHGAKIRVREALYLPERFWLFDDHYARALLARLAWRKGREFGVEFIIDPTVIPLDEERLAHLAGKYYSL
>NZ_CP019391.1|WP_076772231.1|120997_121435_+|transcriptional-repressor
MTTHHHHHAPRDLTRNQTLVFDVLSRADGPLSAYTILDQLRDDGFRAPLQVYRALEKLLDYGLIHRLESLNAFVACAHPQCHQQGLVAFAICEKCGQVTEFSDAAIENLVTAWSVQNGFKSRKTTLELRGICEACDDHKSASRKV
>NZ_CP019391.1|WP_076772229.1|120140_121001_+|metal-ABC-transporter-permease
MTMNTIITKGTSRVLDDFFTRAIIAGIGLALTTGPLGCFIIWRRMAYFGDTMAHSALLGVALALIFDINLMVGVFAVAVAISAILLLLQRRHTLSADSLLGILSHATLSLGLVLMAFMTWVRVDLLSFLFGDILAVSRIDIAFIYGGGALILAVLAWLWRPLLAATVSEDIARAEGMNPALSRIIFMLLLAIVIAIAMKIVGILLITSLLIIPAATARRFASTPEQMAVLASLIGAAGVIGGLYGSIHFDTPSGPSIVVAALAIFILSLLPLNKGRETSPKRIAGQ
>NZ_CP019391.1|WP_076772226.1|119290_120187_+|metal-ABC-transporter-ATP-binding-protein
MDKKSSHPAGAARDILIELKNAGVYRDGRWLVRNVDLSVERGEIVTLIGPNGAGKSTAAKMALHILKPDEGMVSHKPGLRIGYVPQKINIDRTLPLSVERLMTLTGPLPRKEIDAALEAVGIAHLAKAETAHLSGGEFQRALMARALARKPDIMVLDEPVQGVDFSGEAALYELIARLRDDTGCGVLLISHDLHLVMAATDRVICLNGHVCCSGTPRDVTSSPEYVRLFGSRAVGPLAVYEHHHDHTHLPDGRVLYADGTTTDPIAGSTRGPRGHCHVEDGHHHDHEHHHHEGDQPRA
>NZ_CP019391.1|WP_002966650.1|127228_127495_-|flagellar-biosynthetic-protein-FliQ
MNEADALDIVNSAIWTVLTASGPAVLAAMLAGIGIALFQALTQIQEMTLTFVPKIIVIFVVLALTAPFVGAQINAFTLLAYSRIEKGF
>NZ_CP019391.1|WP_002966649.1|127506_127920_-|flagellar-hook-assembly-protein-FlgD
MTTTSPVGSNTTNSASTASNSTSAANKASVDYDSFLKLLVTQMQNQDPTQPMDPTQYVSQLATFSNVEQSVQMNSKLETLIANTSLTQAEGWIGRTLTNADGSISGVVKSVTIQSSGMLAELEDGKTLTIGEGVRIS
>NZ_CP019391.1|WP_004680988.1|127916_128375_-|flagellar-biosynthesis-repressor-FlbT
MAANSKTAIRLSLRAGERIFINGAVLRADRKVSLELLNDATFLLENHVLQPEDTTTPLRQLYFAAQMMLIEPAMREQAGATFAQMLKGMFATFKDAEILNALKLVDELVHNGRVFEALKTIRAQYPREAELMGAQPVVWPVTKSGKSAGANP
>NZ_CP019391.1|WP_002966647.1|128376_128721_-|flagellar-biosynthesis-regulator-FlaF
MYQLRYEDVMNDDMASAKERERMLFDRSIAMLEAARANGAESREGIDAAYFTSKLWTTIIDDLGSEENALPKELRAAIISIGIFVLKEIERIRQGESNDYATLIEITQSIRDGL
>NZ_CP019391.1|WP_076772241.1|128852_129899_-|flagellar-hook-associated-family-protein
MKAQSISTYGATSALRALVAKNKAEMVKAQQEATTGTVFDVGLSLGSRTGQTVSLRKEYDRLSVLTDMNKLVQQRMTATQTAAGKIIENTQNFLGDLAGANNSGETAKTVAKSARSMLDSVTGLLNTSFNGEYIFAGVNTDVKPISDYADGSTAQNAVRQAFQDHFGFAMDDPQVANISGDEMKAFLEGDFAEQFNDANWAANWSDASDTRIKSRISPTETADTSISANADGFRKTVMSAVMVAEFADIGLTASAFDALTTQALQITTQAVTETTAEQTTLGLAQSRTEAATTRIAAQQKILNQSVLNLEEVDPYDAATRVNALKTQIETSYSLTVQLQNMSLLNYLR
>NZ_CP019391.1|WP_076772244.1|129904_131359_-|flagellar-hook-associated-protein-FlgK
MSLSSALLTAKSSLAATSKQTSVVSRNISGAKDADYSRRTASLVSGPYGSLYVGISRSADEAMFNRYIQSNSAASASSTLAGGLDRLSALYSADNYSGSPSGLIGDLRDALQTYAASPSNSALGDSVVSVAQSLANALNDGTRQVQSLRNDADREIADSVANINDLLAKFEKANQDVVGGTRMGRDVSDYLDQRDALLKQLSGEIGITTMMRGDNDMVIFAENGVTLFETTARKVTFEQSTALTPGVAGKAVTVDGVPLSHDTFDQPFGTGRLSGLLQLRDQIAPQYQMQLDEIARGLVTVFAESDQTGSSPDQTGLFSWSGSPAIPGAGLSAGIAGTIGVSVPFIASEGGSALLLRDGGANGANYKYNAQGAAGFSDRLRALNEAFSEPMVFDAAAGISSSSSLTSYSASSLGWLEGKRQKANSEFTYNGTVASQADFALSNATGVDIDTEMALLLDLEHSYQASSRVLTTVSAMLDDLLNAV
>NZ_CP019391.1|WP_076772247.1|131483_132674_-|flagellar-hook-protein-FlgE
MSLYGMMRTGVSGMNAQANRLSTVADNIANASTVGYKRAETQFSSLVLPSTAGQYNSGSVLTDVRYGISDQGGIRSTSSTTDLAIDGNGYFVVQGPGGSTYLTRAGSFVPDKNGDLVNSAGYYLLGAGADEAAGGLTVAGLNVVNVNAAALPAEGSTAGDFTVNLPSTDQAPAAGEYNHKTSLISYNDKGEKITLDVYFTKTGADEWNVSVKNAADGVEIGTTVLNFDPTTGDLVSGGNVAVNLGAYGGQTLNLNLGGSTQRAGDYTISQAVINGQAPSSIKGVDVGNDGAVVAVYENGTQKVLYRIPLANVASPDRMTVVSGNVFLPSAESGDVRLGFPQGDGMGKIMSGTLEESNADIAQELTDMIEAQRSYTANSKVFQTGSELMDVLVNLKR
>NZ_CP019391.1|WP_002966643.1|133082_133766_-|response-regulator-transcription-factor
MIVVVDDRDMVTEGYSSWFGREGITTTGFTPTDFDEWVESVPEQDIMAIEAFLIGECADQHRLPARIRERCKAPVIAVNDRPSLEHTLELFQSGVDDVVRKPVHVREILARINAIRRRAGASATSGADGTQLGPIRVFSDGRDPQINGIDFPLPRRERRILEYLIANRGRRLNKVQIFSAIYGIFDSEVEENVVESHISKLRKKLRGQLGFDPIDSKRFLGYCINIE
>NZ_CP019391.1|WP_076772252.1|134092_134665_-|lytic-transglycosylase-domain-containing-protein
MAVALLISVGAVWLSDVPLAQAENICEREMHRASARYGVPLGILYAVGLTETGRKNSLQPYAMNIEGRAEFPPSQSAAIRRFGEVRAEGAKLIDLGCMQINYHYHSQAFPSVAAMLMPSLNVDYAARFLKRLREREGNWTMAVARYHAGPNNDPAQKRYVCRVMANMVAAGFGNWTPQARSFCFSRDGLL
>NZ_CP019391.1|WP_076772253.1|134618_135893_-|flagellar-hook-length-control-protein-FliK
MSVDMLLTASGRLASLARNSSTQARVAGDEQDGTADPATLFGALLEKPQGKVDASGKDEAEAKSDEKEAGEGSGQKPVAVFGLPQNLLSLASALPGQLHGEGGFSVEEKAGNPARAAVSEPGLADTIDPAGIDKAAAEFAGDDEKRPLRDLPRVKAPQTNGDPAIRAGQVSGEAALDISGDIATNKPAEGAAVDVAGVKAPKPATDHEPAKGMDVRADLLPQQVAAKSTVPAEAKAAAGAPGAARIADIEVVSERSFGTVKTLQIRLDPVELGAVTARIRVAGDGVEVHLVADKSHAAEMLAADRSMIEKALKVAGVGDDTKISVTVADRNAQGAAQHVAAAQNAGQQQASAQQQGHQLASNMQQQGSEGRGGEAQAQFMSGRSGGEGGRNGESGQAGREHANSQAKPENGRGAPHIGGRGLVV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

645148 : 652062

Ochrobactrum_phage(77.78%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099686906.1\|645148_645905_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	5.3e-20	42.4
WP_076772830.1\|646042_646885_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_076773855.1\|647268_647517_-	helix-turn-helix transcriptional regulator	A0A0U4JEE2	Pseudomonas_phage	5.0e-12	44.7
WP_076772832.1\|648170_648473_+	helix-turn-helix domain-containing protein	A0A219VHB8	Ochrobactrum_phage	8.6e-06	38.4
WP_076772834.1\|648521_648737_+	hypothetical protein	A0A219VHE3	Ochrobactrum_phage	1.5e-28	88.7
WP_076773857.1\|648736_648964_+	TraR/DksA C4-type zinc finger protein	A0A219VHE0	Ochrobactrum_phage	8.7e-19	69.4
WP_083699691.1\|648963_649281_+	DUF2730 family protein	NA	NA	NA	NA
WP_076772836.1\|649283_649589_+	hypothetical protein	A0A219VHE1	Ochrobactrum_phage	2.5e-13	46.1
WP_156884125.1\|649595_650195_+	hypothetical protein	NA	NA	NA	NA
WP_076771237.1\|650206_650680_+	hypothetical protein	A0A219VHA5	Ochrobactrum_phage	3.0e-29	64.4
WP_179947171.1\|650688_651120_+	hypothetical protein	A0A219VHA6	Ochrobactrum_phage	1.5e-35	73.1
WP_076771236.1\|651252_652062_+	DNA adenine methylase	A0A219VHB5	Ochrobactrum_phage	4.4e-121	76.7

DBSCAN-SWA_2

918955 : 925147

Pseudomonas_phage(16.67%)

integrase,terminase

attL 911533:911553|attR 930108:930128

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
911533:911553	attL	NA	NA	NA	NA
WP_076773149.1\|918955_919318_-	hypothetical protein	A0A2H4GY26	Pseudomonas_phage	6.9e-10	39.8
WP_076773151.1\|919901_920141_-\|terminase	terminase small subunit	E5AGA2	Erwinia_phage	4.6e-10	65.4
WP_076773881.1\|920176_920830_+	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_076773153.1\|920854_921112_-	twin-arginine translocation signal domain-containing protein	A0A141GF40	Brucella_phage	9.9e-11	53.8
WP_154144825.1\|921096_921267_+	hypothetical protein	NA	NA	NA	NA
WP_076773882.1\|921580_922291_-	porin family protein	O11861	Bartonella_henselae_phage	5.1e-41	37.5
WP_076773155.1\|922501_923425_-	hypothetical protein	NA	NA	NA	NA
WP_083699695.1\|923411_924038_+\|integrase	tyrosine-type recombinase/integrase	G8DH71	Emiliania_huxleyi_virus	3.8e-16	33.2
WP_076773160.1\|924427_925147_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.1e-10	29.7
930108:930128	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019390

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP019391

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection