Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP018766 Staphylococcus aureus subsp. aureus strain UCI62 chromosome, complete genome 10 crisprs cas3,DEDDh,DinG,csa3,RT,WYL 9 3 10 2
NZ_CP018767 Staphylococcus aureus subsp. aureus strain UCI62 plasmid pUCI62, complete sequence 0 crisprs csa3,WYL 0 0 1 0

Results visualization

1. NZ_CP018766
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_1 458114-458215 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_2 813306-813388 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_3 854253-854331 Unclear NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_4 859707-859976 Unclear NA
4 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_5 902990-903071 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_6 1737081-1737165 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_7 2171328-2171409 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_8 2300546-2300626 Orphan NA
1 spacers
csa3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_9 2312867-2312952 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP018766_10 2420906-2420986 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 221022-221043 0 1.0
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 344099-344120 0 1.0
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 686315-686336 0 1.0
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 812347-812368 0 1.0
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 903063-903084 0 1.0
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 1421944-1421965 0 1.0
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 1737157-1737178 0 1.0
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 1751691-1751712 0 1.0
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 2068806-2068827 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 221022-221043 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 344099-344120 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 686315-686336 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 812347-812368 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 903063-903084 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 1421944-1421965 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 1737157-1737178 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 1751691-1751712 0 1.0
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 2068806-2068827 0 1.0
NZ_CP018766_7 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder 2171352-2171385 34 NZ_CP018766.1 854252-854285 0 1.0
NZ_CP018766_7 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder 2171352-2171385 34 NZ_CP018766.1 1210300-1210333 0 1.0
NZ_CP018766_3 3.1|854277|31|NZ_CP018766|CRISPRCasFinder 854277-854307 31 NZ_CP018766.1 1771564-1771594 1 0.968
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 1017380-1017401 1 0.955
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 1771419-1771440 1 0.955
NZ_CP018766_4 4.1|859743|22|NZ_CP018766|CRT 859743-859764 22 NZ_CP018766.1 1771652-1771673 1 0.955
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 NZ_CP018766.1 813297-813319 1 0.957
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 NZ_CP018766.1 813575-813597 1 0.957
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 NZ_CP018766.1 1422060-1422082 1 0.957
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 NZ_CP018766.1 2068864-2068886 1 0.957
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 NZ_CP018766.1 2410077-2410099 1 0.957
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 1017380-1017401 1 0.955
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 1771419-1771440 1 0.955
NZ_CP018766_4 4.3|859860|22|NZ_CP018766|CRT 859860-859881 22 NZ_CP018766.1 1771652-1771673 1 0.955
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 NZ_CP018766.1 813297-813319 1 0.957
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 NZ_CP018766.1 813575-813597 1 0.957
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 NZ_CP018766.1 1422060-1422082 1 0.957
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 NZ_CP018766.1 2068864-2068886 1 0.957
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 NZ_CP018766.1 2410077-2410099 1 0.957
NZ_CP018766_5 5.1|903014|34|NZ_CP018766|CRISPRCasFinder 903014-903047 34 NZ_CP018766.1 1422040-1422073 1 0.971
NZ_CP018766_6 6.1|1737107|33|NZ_CP018766|CRISPRCasFinder 1737107-1737139 33 NZ_CP018766.1 1422041-1422073 1 0.97
NZ_CP018766_7 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder 2171352-2171385 34 NZ_CP018766.1 1863744-1863777 1 0.971
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 866995-867025 1 0.968
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 867051-867081 1 0.968
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 NZ_CP018766.1 1510378-1510400 2 0.913
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 NZ_CP018766.1 2171409-2171431 2 0.913
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 NZ_CP018766.1 1510378-1510400 2 0.913
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 NZ_CP018766.1 2171409-2171431 2 0.913
NZ_CP018766_7 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder 2171352-2171385 34 NZ_CP018766.1 1426414-1426447 2 0.941
NZ_CP018766_7 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder 2171352-2171385 34 NZ_CP018766.1 2859254-2859287 2 0.941
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 122380-122410 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 419376-419406 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 686370-686400 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 867107-867137 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 903326-903356 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 1113377-1113407 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 1215901-1215931 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 1421999-1422029 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 1510431-1510461 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 1751745-1751775 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 2067458-2067488 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 2410130-2410160 2 0.935
NZ_CP018766_10 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder 2420931-2420961 31 NZ_CP018766.1 2585655-2585685 2 0.935

1. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 221022-221043, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

2. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 344099-344120, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

3. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 686315-686336, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

4. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 812347-812368, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

5. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 903063-903084, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

6. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 1421944-1421965, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

7. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 1737157-1737178, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

8. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 1751691-1751712, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

9. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 2068806-2068827, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

10. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 221022-221043, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

11. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 344099-344120, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

12. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 686315-686336, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

13. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 812347-812368, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

14. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 903063-903084, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

15. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 1421944-1421965, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

16. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 1737157-1737178, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

17. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 1751691-1751712, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

18. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 2068806-2068827, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

19. spacer 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder matches to position: 854252-854285, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

20. spacer 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder matches to position: 1210300-1210333, mismatch: 0, identity: 1.0

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctctgtgttgg	Protospacer
**********************************

21. spacer 3.1|854277|31|NZ_CP018766|CRISPRCasFinder matches to position: 1771564-1771594, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttccattgcc	Protospacer
*********************** *******

22. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 1017380-1017401, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

23. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 1771419-1771440, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

24. spacer 4.1|859743|22|NZ_CP018766|CRT matches to position: 1771652-1771673, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

25. spacer 4.2|859801|23|NZ_CP018766|CRT matches to position: 813297-813319, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

26. spacer 4.2|859801|23|NZ_CP018766|CRT matches to position: 813575-813597, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

27. spacer 4.2|859801|23|NZ_CP018766|CRT matches to position: 1422060-1422082, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

28. spacer 4.2|859801|23|NZ_CP018766|CRT matches to position: 2068864-2068886, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

29. spacer 4.2|859801|23|NZ_CP018766|CRT matches to position: 2410077-2410099, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

30. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 1017380-1017401, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

31. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 1771419-1771440, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

32. spacer 4.3|859860|22|NZ_CP018766|CRT matches to position: 1771652-1771673, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

33. spacer 4.4|859918|23|NZ_CP018766|CRT matches to position: 813297-813319, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

34. spacer 4.4|859918|23|NZ_CP018766|CRT matches to position: 813575-813597, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

35. spacer 4.4|859918|23|NZ_CP018766|CRT matches to position: 1422060-1422082, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

36. spacer 4.4|859918|23|NZ_CP018766|CRT matches to position: 2068864-2068886, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

37. spacer 4.4|859918|23|NZ_CP018766|CRT matches to position: 2410077-2410099, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

38. spacer 5.1|903014|34|NZ_CP018766|CRISPRCasFinder matches to position: 1422040-1422073, mismatch: 1, identity: 0.971

attgagaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
****.*****************************

39. spacer 6.1|1737107|33|NZ_CP018766|CRISPRCasFinder matches to position: 1422041-1422073, mismatch: 1, identity: 0.97

attgggaatccaatttctctgtgttggggccca	CRISPR spacer
attgggaatccaatttctctttgttggggccca	Protospacer
******************** ************

40. spacer 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder matches to position: 1863744-1863777, mismatch: 1, identity: 0.971

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctttgtgttgg	Protospacer
*************************.********

41. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 866995-867025, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

42. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 867051-867081, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

43. spacer 4.2|859801|23|NZ_CP018766|CRT matches to position: 1510378-1510400, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

44. spacer 4.2|859801|23|NZ_CP018766|CRT matches to position: 2171409-2171431, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

45. spacer 4.4|859918|23|NZ_CP018766|CRT matches to position: 1510378-1510400, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

46. spacer 4.4|859918|23|NZ_CP018766|CRT matches to position: 2171409-2171431, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

47. spacer 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder matches to position: 1426414-1426447, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtggaatttcttatcgaaattctctgtgttgg	Protospacer
****.********* *******************

48. spacer 7.1|2171352|34|NZ_CP018766|CRISPRCasFinder matches to position: 2859254-2859287, mismatch: 2, identity: 0.941

ttgtagaatttcttttcgaaattctctgtgttgg	CRISPR spacer
ttgtagaatttcttttcgaaattctttttgttgg	Protospacer
*************************.* ******

49. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 122380-122410, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

50. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 419376-419406, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

51. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 686370-686400, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

52. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 867107-867137, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

53. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 903326-903356, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

54. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 1113377-1113407, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

55. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 1215901-1215931, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

56. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 1421999-1422029, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

57. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 1510431-1510461, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

58. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 1751745-1751775, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

59. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 2067458-2067488, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

60. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 2410130-2410160, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

61. spacer 10.1|2420931|31|NZ_CP018766|CRISPRCasFinder matches to position: 2585655-2585685, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP018766_4 4.2|859801|23|NZ_CP018766|CRT 859801-859823 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
NZ_CP018766_4 4.4|859918|23|NZ_CP018766|CRT 859918-859940 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
NZ_CP018766_9 9.1|2312893|34|NZ_CP018766|CRISPRCasFinder 2312893-2312926 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
NZ_CP018766_9 9.1|2312893|34|NZ_CP018766|CRISPRCasFinder 2312893-2312926 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765

1. spacer 4.2|859801|23|NZ_CP018766|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

2. spacer 4.2|859801|23|NZ_CP018766|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

3. spacer 4.4|859918|23|NZ_CP018766|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

4. spacer 4.4|859918|23|NZ_CP018766|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

5. spacer 9.1|2312893|34|NZ_CP018766|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgcatatctttagctttatagcttttatatgct	Protospacer
******************** *.** .*  **  

6. spacer 9.1|2312893|34|NZ_CP018766|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgaataactttagctttattgttataaacagta	Protospacer
*** *** ****************   *** * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 49049 : 93590 36 Staphylococcus_phage(60.0%) integrase,transposase attL 58780:58797|attR 95549:95566
DBSCAN-SWA_2 791425 : 799246 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_3 811217 : 825858 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_4 911392 : 968320 85 Staphylococcus_phage(78.08%) portal,plate,integrase,capsid,head,holin,terminase,tail,transposase attL 909489:909505|attR 944140:944156
DBSCAN-SWA_5 1042835 : 1094849 52 Streptococcus_phage(33.33%) protease,bacteriocin,tRNA NA
DBSCAN-SWA_6 1114887 : 1123360 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_7 1564714 : 1651793 105 Staphylococcus_phage(71.43%) portal,tRNA,protease,plate,integrase,head,holin,capsid,terminase,tail attL 1600991:1601019|attR 1646187:1646215
DBSCAN-SWA_8 1786751 : 1795794 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_9 1925747 : 1983450 53 Staphylococcus_phage(95.24%) protease,tRNA NA
DBSCAN-SWA_10 2092837 : 2176292 106 Staphylococcus_phage(90.54%) portal,protease,integrase,capsid,head,holin,terminase,tail attL 2142615:2142632|attR 2167432:2167449
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP018766.1|WP_000681968.1|2117462_2117639_-|hypothetical-protein 2117462_2117639_- 58 aa aa NA NA NA 2092837-2176292 yes
NZ_CP018766.1|WP_000990056.1|2117881_2117980_-|hypothetical-protein 2117881_2117980_- 32 aa aa NA NA NA 2092837-2176292 yes
2. NZ_CP018767
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 16823 : 24320 9 Staphylococcus_phage(42.86%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage